FvH4_3g38610

Putative lipopolysaccharide-modifying enzyme.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0012971
Physical Location & Seq
Forward (+)
32928597 .. 32932267
3671 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g38610.t1

Sequence Viewer

Length: 1521 bp
ATGGGAACTCTTCCGAGAACCACCAGCCGAACGCCGAGTTACATCCTCCGCTCCGTCATCGCATTGTCATGTCTCTCACTCCTCTTCATTATCTACAAGGTGAACGACTTTGCCAGTCAGACCAAGACAGTTGCCGGACACAACCTAGACCCTACGCCGTGGCATCCTTTCCGGCCTAAGACCTTCAACCACGACGCCCTCCCCAGCCGCGCATACAAGCTCCTCCAGTGCTCTTACCTTGCCTGCCGCTACACCAACAACAAAGGCAATGCCACCACCCTAGAAGACGAAGACCATCGCCGGTCGGCTACTTCCGTGGCCAAATCCCCGCAATGCCCGGAGGTTTTCCGGTGGATTCACCAGGATCTGGAGCCGTGGGCGACCACTAAGATTACTCCGGTCCATATTGAGCAGGCCAAGAGATACGCTGCCTTCCGGGTGGTGATTTATAAAGGGAAGCTGTATGTCGACTTGTACTACGCTTGTGTGCAGAGCCGGGCTATGTTTACCATTTGGGGCTTGTTGCAGATGCTTAAGAGGTACCCTGGCAGGGTTCCTGATGTGGATTTTATGTTTGATTGTATGGACAAGCCTACCATTGAGCGGTCCGAGCATGCCTCAATGCCGTTGCCGCTGTTCCGGTATTGCACCAATGATGCCCACTATGATATCCCATTTCCTGACTGGTCCTTTTGGGGATGGCCAGAAACAAATATAGAGCCGTGGGATGAGCAGTTCCAGGCTATCAAACGGGGTGGACAGGAAACGACTTGGAGAAAGAAGGAGCTTTTGGCATATTGGAAAGGAAATCCTGATGTTGGCTCCCCTGTTCGTAAAGAGTTACTCAACTGTAATGATTCGAAGACGTACAGAGCACAGATCCTGAAACAGGATTGGGATGAGGAAGCAAAGGCTGGTTTCCAGCAGTCCAGTCTATCTAAGCAGTGCAATCATCGGTATAAGATCTATGCTGAAGGCTATGCTTGGTCTGTAAGTTTGAAATATATCTTATCATGTGGTTCTCTGGCATTAGTAATAACACCGCAATATGAGGATTTCTTCAGCCGCGGCCTCTTTCCCAAGGTTAACTATTGGCCCATCTCTGCTAATGCAATATGCCCTTCAATAAAATCTGCTGTGGACTGGGGTCATGGACACGTACCTGAGGCTCAGGCAATAGGAAGAAGAGGGCAGGAGTATATGGAAAACCTAAACATGGATCGGGTCTACGATTACATGTTTCATCTCATCACCGAGTACTCAAAGCTGCAGAACTTCAAGCCAGTACCTCCAAACACTGCCATGGAAGTATGTGCAAATTCTGTGCTCTGTCTTGCTGACGATGCAAAACAAAGGGAATATCTCGAACGAACAAGAGCTAAACCTTTTCCTGGCCCTCCTTGCGATCTCCAGCCTCCTGATGGTAATCTCATCAATAAATGGAAGAAAGAAAAGGCAGCTGTGTTTCAGACTGTGGAGGATATGAATCTAGTAAATGACATACCTGAACCAGTGCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00514 map00514
Pfam Domains
Protein Families
Glyco_transf_90

Protein Analysis

507

Amino Acids

58.42

Weight (kDa)

8.38

Isoelectric Point (pI)

54.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_90 PF05686 108 - 495 3.4e-145 Glycosyl transferase family 90
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012971)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07220
fragaria_vesca FvH4_3g38610
malus_domestica MD03G1069900.v1.1 MD11G1073700.v1.1 MD17G1174000.v1.1
prunus_persica Prupe.6G057000_v2.0.a1
pyrus_communis pycom03g05560
rosa_chinensis RchiOBHm_Chr5g0069671
rosa_laevigata RLG00000036083
rosa_multiflora Rmu_sc0007688.1_g000001 Rmu_sc0021095.1_g000001
rosa_roxburghii Rroxscaffold_1G00011410
rosa_rugosa Rorug05G0399200
rosa_samantha Rh5AG455900 Rh5BG474900 Rh5CG498400 Rh5DG486400
rosa_wichuraiana Rw5G042540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 450
Acc65I GGTACC 1 cut(s) 540
AccB1I GGYRCC 1 cut(s) 540
AccB7I CCANNNNNTGG 1 cut(s) 367
AccBSI CCGCTC 2 cut(s) 51, 604
AccI GTMKAC 2 cut(s) 468, 1227
AccII CGCG 2 cut(s) 210, 1068
AciI CCGC 9 cut(s) 49, 208, 247, 329, 604, 632, 1043, 1066, 1068
AclWI GGATC 3 cut(s) 372, 874, 1227
AcoI YGGCCR 2 cut(s) 318, 701
AcsI RAATTY 1 cut(s) 1318
AcuI CTGAAG 2 cut(s) 993, 1045
AcyI GRCGYC 1 cut(s) 195
AfaI GTAC 6 cut(s) 476, 542, 869, 1161, 1259, 1287
AfiI CCNNNNNNNGG 8 cut(s) 367, 550, 603, 818, 889, 1216, 1391, 1421
AflII CTTAAG 1 cut(s) 533
AflIII ACRYGT 2 cut(s) 1156, 1236
AgsI TTSAA 4 cut(s) 187, 1000, 1125, 1279
AjnI CCWGG 4 cut(s) 360, 544, 738, 1390
AjuI GAANNNNNNNTTGG 2 cut(s) 773, 805
AloI GAACNNNNNNTCC 2 cut(s) 719, 751
AluBI AGCT 6 cut(s) 220, 460, 787, 1267, 1379, 1460
AluI AGCT 6 cut(s) 220, 460, 787, 1267, 1379, 1460
Alw21I GWGCWC 3 cut(s) 233, 877, 1329
Alw26I GTCTC 1 cut(s) 77
AlwI GGATC 3 cut(s) 372, 874, 1227
AlwNI CAGNNNCTG 2 cut(s) 367, 883
AoxI GGCC 7 cut(s) 173, 318, 414, 701, 1069, 1094, 1393
ApeKI GCWGC 3 cut(s) 428, 1267, 1457
ApoI RAATTY 1 cut(s) 1318
Asp718I GGTACC 1 cut(s) 540
AspLEI GCGC 1 cut(s) 212
AspS9I GGNCC 5 cut(s) 400, 606, 687, 1095, 1394
AsuC2I CCSGG 3 cut(s) 338, 437, 497
AsuHPI GGTGA 4 cut(s) 112, 350, 454, 1243
AsuII TTCGAA 1 cut(s) 860
AvaII GGWCC 3 cut(s) 400, 606, 687
AxyI CCTNAGG 1 cut(s) 1164
BalI TGGCCA 2 cut(s) 320, 703
BanI GGYRCC 1 cut(s) 540
BbsI GAAGAC 3 cut(s) 291, 297, 869
Bbv12I GWGCWC 3 cut(s) 233, 877, 1329
BbvI GCAGC 3 cut(s) 415, 1254, 1469
BccI CCATC 4 cut(s) 303, 693, 1106, 1415
BceAI ACGGC 4 cut(s) 142, 358, 610, 706
BciT130I CCWGG 4 cut(s) 362, 546, 740, 1392
BcnI CCSGG 3 cut(s) 338, 437, 497
BcoDI GTCTC 1 cut(s) 77
BfaI CTAG 3 cut(s) 146, 281, 1490
BfmI CTRYAG 1 cut(s) 1268
BfrI CTTAAG 1 cut(s) 533
BglII AGATCT 1 cut(s) 963
BisI GCNGC 8 cut(s) 208, 247, 429, 632, 1066, 1069, 1268, 1458
BlsI GCNGC 8 cut(s) 209, 248, 430, 633, 1067, 1070, 1269, 1459
BmcAI AGTACT 1 cut(s) 1259
Bme1390I CCNGG 7 cut(s) 338, 362, 437, 497, 546, 740, 1392
Bme18I GGWCC 3 cut(s) 400, 606, 687
BmgT120I GGNCC 5 cut(s) 400, 606, 687, 1095, 1394
BmiI GGNNCC 4 cut(s) 372, 542, 555, 823
BmrFI CCNGG 7 cut(s) 338, 362, 437, 497, 546, 740, 1392
BmrI ACTGGG 1 cut(s) 1153
BmsI GCATC 4 cut(s) 172, 519, 646, 1333
BmuI ACTGGG 1 cut(s) 1153
BoxI GACNNNNGTC 1 cut(s) 1146
BpiI GAAGAC 3 cut(s) 291, 297, 869
BplI GAGNNNNNCTC 2 cut(s) 602, 634
BpmI CTGGAG 3 cut(s) 209, 389, 1394
Bpu10I CCTNAGC 1 cut(s) 1170
Bpu14I TTCGAA 1 cut(s) 860
BpuMI CCSGG 3 cut(s) 338, 437, 497
BsaAI YACGTR 1 cut(s) 1159
BsaBI GATNNNNATC 2 cut(s) 1425, 1485
BsaHI GRCGYC 1 cut(s) 195
BsaJI CCNNGG 8 cut(s) 158, 315, 374, 544, 722, 1066, 1080, 1302
BsaWI WCCGGW 3 cut(s) 348, 397, 639
Bsc4I CCNNNNNNNGG 8 cut(s) 367, 550, 603, 818, 889, 1216, 1391, 1421
Bse118I RCCGGY 1 cut(s) 300
Bse1I ACTGG 7 cut(s) 114, 226, 689, 930, 1148, 1283, 1511
Bse21I CCTNAGG 1 cut(s) 1164
Bse3DI GCAATG 2 cut(s) 274, 338
Bse8I GATNNNNATC 2 cut(s) 1425, 1485
BseBI CCWGG 4 cut(s) 362, 546, 740, 1392
BseDI CCNNGG 8 cut(s) 158, 315, 374, 544, 722, 1066, 1080, 1302
BseGI GGATG 5 cut(s) 42, 163, 704, 733, 904
BseJI GATNNNNATC 2 cut(s) 1425, 1485
BseLI CCNNNNNNNGG 8 cut(s) 367, 550, 603, 818, 889, 1216, 1391, 1421
BseMI GCAATG 2 cut(s) 274, 338
BseMII CTCAG 2 cut(s) 1155, 1184
BseNI ACTGG 7 cut(s) 114, 226, 689, 930, 1148, 1283, 1511
BseRI GAGGAG 2 cut(s) 71, 212
BseXI GCAGC 3 cut(s) 415, 1254, 1469
BseYI CCCAGC 1 cut(s) 203
BsgI GTGCAG 1 cut(s) 509
Bsh1236I CGCG 2 cut(s) 210, 1068
Bsh1285I CGRYCG 1 cut(s) 305
BshFI GGCC 7 cut(s) 175, 320, 416, 703, 1071, 1096, 1395
BshNI GGYRCC 1 cut(s) 540
BsiEI CGRYCG 1 cut(s) 305
BsiHKAI GWGCWC 3 cut(s) 233, 877, 1329
BsiSI CCGG 9 cut(s) 135, 172, 301, 338, 349, 398, 436, 496, 640
BslI CCNNNNNNNGG 8 cut(s) 367, 550, 603, 818, 889, 1216, 1391, 1421
BsmAI GTCTC 1 cut(s) 77
BsnI GGCC 7 cut(s) 175, 320, 416, 703, 1071, 1096, 1395
Bsp119I TTCGAA 1 cut(s) 860
Bsp1286I GDGCHC 3 cut(s) 233, 877, 1329
Bsp143I GATC 5 cut(s) 364, 879, 963, 1219, 1405
Bsp19I CCATGG 1 cut(s) 1302
BspACI CCGC 9 cut(s) 49, 208, 247, 329, 604, 632, 1043, 1066, 1068
BspANI GGCC 7 cut(s) 175, 320, 416, 703, 1071, 1096, 1395
BspCNI CTCAG 2 cut(s) 1156, 1183
BspFNI CGCG 2 cut(s) 210, 1068
BspLI GGNNCC 4 cut(s) 372, 542, 555, 823
BspMAI CTGCAG 1 cut(s) 1272
BspPI GGATC 3 cut(s) 372, 874, 1227
BspT104I TTCGAA 1 cut(s) 860
BspT107I GGYRCC 1 cut(s) 540
BspTI CTTAAG 1 cut(s) 533
BsrBI CCGCTC 2 cut(s) 51, 604
BsrDI GCAATG 2 cut(s) 274, 338
BsrFI RCCGGY 1 cut(s) 300
BsrI ACTGG 7 cut(s) 114, 226, 689, 930, 1148, 1283, 1511
BssAI RCCGGY 1 cut(s) 300
BssECI CCNNGG 8 cut(s) 158, 315, 374, 544, 722, 1066, 1080, 1302
BssMI GATC 5 cut(s) 364, 879, 963, 1219, 1405
BssNI GRCGYC 1 cut(s) 195
BssT1I CCWWGG 2 cut(s) 1080, 1302
Bst2UI CCWGG 4 cut(s) 362, 546, 740, 1392
Bst4CI ACNGT 3 cut(s) 130, 851, 1474
Bst6I CTCTTC 3 cut(s) 15, 89, 1180
BstACI GRCGYC 1 cut(s) 195
BstAFI CTTAAG 1 cut(s) 533
BstBAI YACGTR 1 cut(s) 1159
BstBI TTCGAA 1 cut(s) 860
BstC8I GCNNGC 3 cut(s) 244, 414, 615
BstDEI CTNAG 5 cut(s) 177, 387, 939, 1164, 1170
BstDSI CCRYGG 6 cut(s) 158, 315, 374, 722, 1066, 1302
BstENI CCTNNNNNAGG 1 cut(s) 887
BstF5I GGATG 5 cut(s) 42, 163, 704, 733, 904
BstFNI CGCG 2 cut(s) 210, 1068
BstHHI GCGC 1 cut(s) 212
BstKTI GATC 5 cut(s) 367, 882, 966, 1222, 1408
BstMAI GTCTC 1 cut(s) 77
BstMBI GATC 5 cut(s) 364, 879, 963, 1219, 1405
BstMCI CGRYCG 1 cut(s) 305
BstMWI GCNNNNNNNGC 4 cut(s) 610, 631, 1343, 1401
BstNI CCWGG 4 cut(s) 362, 546, 740, 1392
BstNSI RCATGY 2 cut(s) 617, 1240
BstPAI GACNNNNGTC 1 cut(s) 1146
BstSCI CCNGG 7 cut(s) 336, 360, 435, 495, 544, 738, 1390
BstSFI CTRYAG 1 cut(s) 1268
BstUI CGCG 2 cut(s) 210, 1068
BstV1I GCAGC 3 cut(s) 415, 1254, 1469
BstV2I GAAGAC 3 cut(s) 291, 297, 869
BstX2I RGATCY 3 cut(s) 364, 879, 963
BstYI RGATCY 3 cut(s) 364, 879, 963
Bsu36I CCTNAGG 1 cut(s) 1164
BsuRI GGCC 7 cut(s) 175, 320, 416, 703, 1071, 1096, 1395
BtgI CCRYGG 6 cut(s) 158, 315, 374, 722, 1066, 1302
BtgZI GCGATG 2 cut(s) 43, 281
BtsCI GGATG 5 cut(s) 42, 163, 704, 733, 904
BtsI GCAGTG 2 cut(s) 950, 1296
BtsIMutI CAGTG 4 cut(s) 233, 950, 1296, 1518
Cac8I GCNNGC 3 cut(s) 244, 414, 615
CaiI CAGNNNCTG 2 cut(s) 367, 883
CfoI GCGC 1 cut(s) 212
Cfr10I RCCGGY 1 cut(s) 300
Cfr13I GGNCC 5 cut(s) 400, 606, 687, 1095, 1394
Cfr42I CCGCGG 1 cut(s) 1069
CpoI CGGWCCG 1 cut(s) 606
CseI GACGC 1 cut(s) 203
Csp6I GTAC 6 cut(s) 475, 541, 868, 1160, 1258, 1286
CspCI CAANNNNNGTGG 2 cut(s) 736, 771
CspI CGGWCCG 1 cut(s) 606
CviAII CATG 7 cut(s) 69, 614, 1014, 1151, 1216, 1237, 1303
CviQI GTAC 6 cut(s) 475, 541, 868, 1160, 1258, 1286
DdeI CTNAG 5 cut(s) 177, 387, 939, 1164, 1170
DpnI GATC 5 cut(s) 366, 881, 965, 1221, 1407
DpnII GATC 5 cut(s) 364, 879, 963, 1219, 1405
EaeI YGGCCR 2 cut(s) 318, 701
Eam1104I CTCTTC 3 cut(s) 15, 89, 1180
EarI CTCTTC 3 cut(s) 15, 89, 1180
Eco130I CCWWGG 2 cut(s) 1080, 1302
Eco32I GATATC 1 cut(s) 670
Eco47I GGWCC 3 cut(s) 400, 606, 687
Eco57I CTGAAG 2 cut(s) 993, 1045
Eco81I CCTNAGG 1 cut(s) 1164
EcoNI CCTNNNNNAGG 1 cut(s) 887
EcoRII CCWGG 4 cut(s) 360, 544, 738, 1390
EcoRV GATATC 1 cut(s) 670
EcoT14I CCWWGG 2 cut(s) 1080, 1302
ErhI CCWWGG 2 cut(s) 1080, 1302
FaeI CATG 7 cut(s) 72, 617, 1017, 1154, 1219, 1240, 1306
FatI CATG 7 cut(s) 68, 613, 1013, 1150, 1215, 1236, 1302
FauI CCCGC 1 cut(s) 336
FblI GTMKAC 2 cut(s) 468, 1227
Fnu4HI GCNGC 8 cut(s) 208, 247, 429, 632, 1066, 1069, 1268, 1458
FokI GGATG 5 cut(s) 29, 150, 711, 740, 911
Fsp4HI GCNGC 8 cut(s) 208, 247, 429, 632, 1066, 1069, 1268, 1458
FspBI CTAG 3 cut(s) 146, 281, 1490
GlaI GCGC 1 cut(s) 211
GluI GCNGC 8 cut(s) 208, 247, 429, 632, 1066, 1069, 1268, 1458
GsaI CCCAGC 1 cut(s) 207
GsuI CTGGAG 3 cut(s) 209, 389, 1394
HaeIII GGCC 7 cut(s) 175, 320, 416, 703, 1071, 1096, 1395
HapII CCGG 9 cut(s) 135, 172, 301, 338, 349, 398, 436, 496, 640
HgaI GACGC 1 cut(s) 203
HhaI GCGC 1 cut(s) 212
Hin1I GRCGYC 1 cut(s) 195
Hin1II CATG 7 cut(s) 72, 617, 1017, 1154, 1219, 1240, 1306
Hin6I GCGC 1 cut(s) 210
HinP1I GCGC 1 cut(s) 210
HincII GTYRAC 2 cut(s) 469, 1087
HindII GTYRAC 2 cut(s) 469, 1087
HinfI GANTC 3 cut(s) 355, 857, 1486
HpaI GTTAAC 1 cut(s) 1087
HpaII CCGG 9 cut(s) 135, 172, 301, 338, 349, 398, 436, 496, 640
HphI GGTGA 4 cut(s) 112, 350, 454, 1243
Hpy166II GTNNAC 7 cut(s) 103, 469, 507, 758, 1087, 1141, 1228
Hpy188I TCNGA 4 cut(s) 15, 120, 610, 1470
Hpy188III TCNNGA 7 cut(s) 368, 557, 680, 812, 883, 1364, 1418
Hpy8I GTNNAC 7 cut(s) 103, 469, 507, 758, 1087, 1141, 1228
Hpy99I CGWCG 1 cut(s) 197
HpyAV CCTTC 5 cut(s) 193, 442, 775, 968, 1131
HpyCH4III ACNGT 3 cut(s) 130, 851, 1474
HpyCH4IV ACGT 2 cut(s) 866, 1158
HpyCH4V TGCA 8 cut(s) 490, 526, 648, 948, 1112, 1270, 1316, 1346
HpyF10VI GCNNNNNNNGC 4 cut(s) 610, 631, 1343, 1401
HpyF3I CTNAG 5 cut(s) 177, 387, 939, 1164, 1170
HpySE526I ACGT 2 cut(s) 866, 1158
Hsp92I GRCGYC 1 cut(s) 195
Hsp92II CATG 7 cut(s) 72, 617, 1017, 1154, 1219, 1240, 1306
HspAI GCGC 1 cut(s) 210
KpnI GGTACC 1 cut(s) 544
KspAI GTTAAC 1 cut(s) 1087
KspI CCGCGG 1 cut(s) 1069
Kzo9I GATC 5 cut(s) 364, 879, 963, 1219, 1405
LmnI GCTCC 5 cut(s) 56, 225, 370, 784, 827
Lsp1109I GCAGC 3 cut(s) 415, 1254, 1469
LweI GCATC 4 cut(s) 172, 519, 646, 1333
MaeI CTAG 3 cut(s) 146, 281, 1490
MaeII ACGT 2 cut(s) 866, 1158
MaeIII GTNAC 2 cut(s) 38, 840
MalI GATC 5 cut(s) 366, 881, 965, 1221, 1407
MbiI CCGCTC 2 cut(s) 51, 604
MboI GATC 5 cut(s) 364, 879, 963, 1219, 1405
MboII GAAGA 8 cut(s) 76, 296, 302, 874, 1051, 1194, 1197, 1456
MflI RGATCY 3 cut(s) 364, 879, 963
MhlI GDGCHC 3 cut(s) 233, 877, 1329
MlsI TGGCCA 2 cut(s) 320, 703
MluCI AATT 1 cut(s) 1318
MluNI TGGCCA 2 cut(s) 320, 703
Mox20I TGGCCA 2 cut(s) 320, 703
MscI TGGCCA 2 cut(s) 320, 703
MseI TTAA 2 cut(s) 534, 1086
MslI CAYNNNNRTG 2 cut(s) 67, 1301
Msp20I TGGCCA 2 cut(s) 320, 703
MspA1I CMGCKG 3 cut(s) 634, 1068, 1460
MspCI CTTAAG 1 cut(s) 533
MspI CCGG 9 cut(s) 135, 172, 301, 338, 349, 398, 436, 496, 640
MspR9I CCNGG 7 cut(s) 338, 362, 437, 497, 546, 740, 1392
MvaI CCWGG 4 cut(s) 362, 546, 740, 1392
MvnI CGCG 2 cut(s) 210, 1068
MwoI GCNNNNNNNGC 4 cut(s) 610, 631, 1343, 1401
NciI CCSGG 3 cut(s) 338, 437, 497
NcoI CCATGG 1 cut(s) 1302
NdeII GATC 5 cut(s) 364, 879, 963, 1219, 1405
NlaIII CATG 7 cut(s) 72, 617, 1017, 1154, 1219, 1240, 1306
NlaIV GGNNCC 4 cut(s) 372, 542, 555, 823
NmeAIII GCCGAG 1 cut(s) 60
NspI RCATGY 2 cut(s) 617, 1240
NspV TTCGAA 1 cut(s) 860
PaeI GCATGC 1 cut(s) 617
PciI ACATGT 1 cut(s) 1236
PfeI GAWTC 3 cut(s) 355, 857, 1486
PflMI CCANNNNNTGG 1 cut(s) 367
PkrI GCNGC 8 cut(s) 209, 248, 430, 633, 1067, 1070, 1269, 1459
Ppu21I YACGTR 1 cut(s) 1159
PscI ACATGT 1 cut(s) 1236
PshAI GACNNNNGTC 1 cut(s) 1146
PsiI TTATAA 1 cut(s) 450
Psp6I CCWGG 4 cut(s) 360, 544, 738, 1390
PspFI CCCAGC 1 cut(s) 203
PspGI CCWGG 4 cut(s) 360, 544, 738, 1390
PspN4I GGNNCC 4 cut(s) 372, 542, 555, 823
PspPI GGNCC 5 cut(s) 400, 606, 687, 1095, 1394
PstI CTGCAG 1 cut(s) 1272
PstNI CAGNNNCTG 2 cut(s) 367, 883
PsuI RGATCY 3 cut(s) 364, 879, 963
PvuII CAGCTG 1 cut(s) 1460
RsaI GTAC 6 cut(s) 476, 542, 869, 1161, 1259, 1287
RsaNI GTAC 6 cut(s) 475, 541, 868, 1160, 1258, 1286
RseI CAYNNNNRTG 2 cut(s) 67, 1301
Rsr2I CGGWCCG 1 cut(s) 606
RsrII CGGWCCG 1 cut(s) 606
SacII CCGCGG 1 cut(s) 1069
SalI GTCGAC 1 cut(s) 467
SaqAI TTAA 2 cut(s) 534, 1086
SatI GCNGC 8 cut(s) 208, 247, 429, 632, 1066, 1069, 1268, 1458
Sau3AI GATC 5 cut(s) 364, 879, 963, 1219, 1405
Sau96I GGNCC 5 cut(s) 400, 606, 687, 1095, 1394
ScaI AGTACT 1 cut(s) 1259
ScrFI CCNGG 7 cut(s) 338, 362, 437, 497, 546, 740, 1392
SduI GDGCHC 3 cut(s) 233, 877, 1329
SfaNI GCATC 4 cut(s) 172, 519, 646, 1333
SfcI CTRYAG 1 cut(s) 1268
Sfr303I CCGCGG 1 cut(s) 1069
SfuI TTCGAA 1 cut(s) 860
SgrBI CCGCGG 1 cut(s) 1069
SinI GGWCC 3 cut(s) 400, 606, 687
SmiMI CAYNNNNRTG 2 cut(s) 67, 1301
SmlI CTYRAG 1 cut(s) 533
SmoI CTYRAG 1 cut(s) 533
SphI GCATGC 1 cut(s) 617
Sse9I AATT 1 cut(s) 1318
SsiI CCGC 9 cut(s) 49, 208, 247, 329, 604, 632, 1043, 1066, 1068
SspMI CTAG 3 cut(s) 146, 281, 1490
StyD4I CCNGG 7 cut(s) 336, 360, 435, 495, 544, 738, 1390
StyI CCWWGG 2 cut(s) 1080, 1302
TaaI ACNGT 3 cut(s) 130, 851, 1474
TaiI ACGT 2 cut(s) 869, 1161
TaqI TCGA 3 cut(s) 468, 860, 1365
TasI AATT 1 cut(s) 1318
TatI WGTACW 2 cut(s) 474, 1257
TauI GCSGC 5 cut(s) 210, 249, 634, 1068, 1071
TfiI GAWTC 3 cut(s) 355, 857, 1486
Tru1I TTAA 2 cut(s) 534, 1086
Tru9I TTAA 2 cut(s) 534, 1086
TscAI CASTG 4 cut(s) 233, 950, 1303, 1518
TseI GCWGC 3 cut(s) 428, 1267, 1457
TspDTI ATGAA 3 cut(s) 76, 1232, 1499
TspGWI ACGGA 2 cut(s) 43, 304
TspRI CASTG 4 cut(s) 233, 950, 1303, 1518
Van91I CCANNNNNTGG 1 cut(s) 367
Vha464I CTTAAG 1 cut(s) 533
VpaK11BI GGWCC 3 cut(s) 400, 606, 687
XagI CCTNNNNNAGG 1 cut(s) 887
XapI RAATTY 1 cut(s) 1318
XceI RCATGY 2 cut(s) 617, 1240
XcmI CCANNNNNNNNNTGG 2 cut(s) 681, 1418
XmiI GTMKAC 2 cut(s) 468, 1227
XspI CTAG 3 cut(s) 146, 281, 1490
ZrmI AGTACT 1 cut(s) 1259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.