Prupe.6G057000_v2.0.a1

Putative lipopolysaccharide-modifying enzyme.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0012971
Physical Location & Seq
Reverse (-)
4000176 .. 4003449
3274 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G057000.1

Sequence Viewer

Length: 1485 bp
ATGGCTTCAAGAGCCACCGCTCGCTCGCCCTCTTACATCCTTCCATCCGTCGTTGCCTTATCTCTCCTCTCTCTCGTTGTCGTCGTCTACAAGGTGGACGACTTCGCCACTCAGACGAAGACATTGGCGGGCCATAACCTCGACCCGACGCCATGGCACCTGTTCCCTCCCAAGACCTTCTCCGACGAGACCCTCCACGACCGAGCCTACAAGCTCATCCACTGCTCCTACCTGGCTTGCCGCTACAGAAACAACGACATCCCTGAACGGCGTCGTCCTCCTTCGTCCAGCGCGAAAGCCCCAGAATGCCCCAATTTCTTCCGATGGATCCATCACGATCTGGAGCCGTGGGCCCGAACCCGGATCTCCGCGGCCCATCTGGAGGCGGCCAAGCAGTACGCTGCGTTTCGCGTGGTGATTGTTGGCGGGAAGCTGTATGTGGATTTGTACTGGGCTTGTGTGCAGAGTCGAGCCATGTTCACCATTTGGGGTTTGCTGCAGCTCCTTGCGAGGTACCCGGATCGGGTTCCGGATGTGGATATCATGTTTGATTGTATGGACAAGCCCATTATTAACCGGACTGCGCATGAATCAATGCCTTTGCCACTTTTCCGGTACTGTACGGATGAAGATCACTTTGATATCCCATTTCCTGATTGGTCCTTCTGGGGTTGGCCGGAGCTACATATTTATCCCTGGAATGAGCAGTTCCGAAATATCAAACGGGGTTCTAAGGAAAGAAGTTGGAGAAAGAAGGAGCCTTTTGCGTATTGGAAAGGAAACCCAGATGTTAGTTCCCCTGTTCGGACAGAGTTACTTAACTGTAACGACACTAAGATGTGGAGAGCACAGATTATGCGTCAGGATTGGGAAGCGGAAGCAAGAGCCGGTTATGAGCAGTCCAAACTGTCTAATCAGTGTAATCATCGGTATAAAATCTATGCAGAAGGCTATGCTTGGTCCGTGAGCTTGAAATATATTGTATCATGTGGTTCTCTTACATTAATAATAACCCCACAATATGAGGATTTCTTCAGCCGTGGTCTCATTCCTAGGGTTAACTATTGGCCCATCTCTCCCAATGCTATATGCCCGTCCATAAAGTCTGCTGTTGACTGGGGCCATGGACACCAATCTGAGGCTAAGGAAATAGGACAAAGAGGGCAAGATTTTATGGAAAGCCTAAGCATGGACCGGGTCTATGATTACATGTTTCACCTCATCACAGAGTACTCGAAGCTGCTGGACTTCAAGCCAGTCCCTCCAGATTCTGCTCTGGAAGTGTGTGCGGAATCCCTGGTTTGTCTTGCCGACCCGAAACAGATCCAGTTTTTTAAAAAGACAACTGCATACCCTTCTGCTAGCCCCCCATGCACTCTCCAGTCGGCCGATAGTAATCTCATCAAGAGATGGAGGCAGAAAAAGAAGGAAATAATGAAGGCTGTGGAGGATATGAATCCAAAAGAACGGAGACGATTAAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00514 map00514
Pfam Domains
Protein Families
Glyco_transf_90

Protein Analysis

495

Amino Acids

57.52

Weight (kDa)

8.79

Isoelectric Point (pI)

51.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012971)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07220
fragaria_vesca FvH4_3g38610
malus_domestica MD03G1069900.v1.1 MD11G1073700.v1.1 MD17G1174000.v1.1
prunus_persica Prupe.6G057000_v2.0.a1
pyrus_communis pycom03g05560
rosa_chinensis RchiOBHm_Chr5g0069671
rosa_laevigata RLG00000036083
rosa_multiflora Rmu_sc0007688.1_g000001 Rmu_sc0021095.1_g000001
rosa_roxburghii Rroxscaffold_1G00011410
rosa_rugosa Rorug05G0399200
rosa_samantha Rh5AG455900 Rh5BG474900 Rh5CG498400 Rh5DG486400
rosa_wichuraiana Rw5G042540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 585
Acc65I GGTACC 1 cut(s) 513
AccB1I GGYRCC 2 cut(s) 156, 513
AccBSI CCGCTC 1 cut(s) 20
AccI GTMKAC 1 cut(s) 87
AccII CGCG 3 cut(s) 293, 371, 411
AccIII TCCGGA 1 cut(s) 529
AciI CCGC 9 cut(s) 18, 128, 241, 369, 371, 386, 426, 875, 1289
AclWI GGATC 5 cut(s) 322, 335, 371, 528, 1318
AcoI YGGCCR 3 cut(s) 387, 674, 1386
AcuI CTGAAG 1 cut(s) 1018
AcyI GRCGYC 2 cut(s) 149, 271
AfaI GTAC 6 cut(s) 398, 449, 515, 617, 622, 1232
AfiI CCNNNNNNNGG 6 cut(s) 360, 382, 523, 804, 1138, 1189
AflIII ACRYGT 1 cut(s) 1209
AgsI TTSAA 3 cut(s) 9, 973, 1252
AjnI CCWGG 3 cut(s) 231, 695, 1296
AluBI AGCT 6 cut(s) 214, 433, 502, 682, 969, 1240
AluI AGCT 6 cut(s) 214, 433, 502, 682, 969, 1240
Alw21I GWGCWC 1 cut(s) 850
Alw26I GTCTC 3 cut(s) 182, 1049, 1465
AlwI GGATC 5 cut(s) 322, 335, 371, 528, 1318
AlwNI CAGNNNCTG 1 cut(s) 1271
Aor13HI TCCGGA 1 cut(s) 529
AoxI GGCC 8 cut(s) 130, 351, 372, 387, 674, 1067, 1120, 1386
ApaI GGGCCC 1 cut(s) 355
ApeKI GCWGC 4 cut(s) 401, 496, 499, 1240
AseI ATTAAT 1 cut(s) 1004
Asp718I GGTACC 1 cut(s) 513
AspA2I CCTAGG 1 cut(s) 1052
AspLEI GCGC 2 cut(s) 293, 586
AspS9I GGNCC 9 cut(s) 130, 351, 352, 373, 660, 960, 1068, 1120, 1192
AsuC2I CCSGG 3 cut(s) 361, 518, 1196
AsuHPI GGTGA 3 cut(s) 427, 472, 1208
AsuNHI GCTAGC 1 cut(s) 1361
AvaII GGWCC 3 cut(s) 660, 960, 1192
AvrII CCTAGG 1 cut(s) 1052
BaeGI GKGCMC 1 cut(s) 355
BamHI GGATCC 1 cut(s) 327
BanI GGYRCC 2 cut(s) 156, 513
BanII GRGCYC 1 cut(s) 355
BbsI GAAGAC 1 cut(s) 125
Bbv12I GWGCWC 1 cut(s) 850
BbvI GCAGC 4 cut(s) 388, 483, 511, 1227
BccI CCATC 6 cut(s) 52, 318, 339, 384, 1079, 1404
BceAI ACGGC 3 cut(s) 284, 331, 1023
BciT130I CCWGG 3 cut(s) 233, 697, 1298
BcnI CCSGG 3 cut(s) 361, 518, 1196
BcoDI GTCTC 3 cut(s) 182, 1049, 1465
BfaI CTAG 3 cut(s) 1053, 1362, 1483
BfmI CTRYAG 2 cut(s) 244, 497
BisI GCNGC 7 cut(s) 241, 372, 387, 402, 497, 500, 1241
BlnI CCTAGG 1 cut(s) 1052
BlsI GCNGC 7 cut(s) 242, 373, 388, 403, 498, 501, 1242
BmcAI AGTACT 1 cut(s) 1232
Bme1390I CCNGG 6 cut(s) 233, 361, 518, 697, 1196, 1298
Bme18I GGWCC 3 cut(s) 660, 960, 1192
BmgT120I GGNCC 9 cut(s) 130, 351, 352, 373, 660, 960, 1068, 1120, 1192
BmiI GGNNCC 8 cut(s) 158, 329, 345, 353, 515, 528, 759, 1121
BmrFI CCNGG 6 cut(s) 233, 361, 518, 697, 1196, 1298
BmrI ACTGGG 2 cut(s) 460, 1126
BmtI GCTAGC 1 cut(s) 1365
BmuI ACTGGG 2 cut(s) 460, 1126
BpiI GAAGAC 1 cut(s) 125
BpmI CTGGAG 4 cut(s) 362, 401, 1248, 1364
Bpu10I CCTNAGC 2 cut(s) 1143, 1184
BpuMI CCSGG 3 cut(s) 361, 518, 1196
BsaBI GATNNNNATC 3 cut(s) 630, 1395, 1455
BsaHI GRCGYC 2 cut(s) 149, 271
BsaI GGTCTC 2 cut(s) 182, 1049
BsaJI CCNNGG 8 cut(s) 152, 347, 369, 695, 1039, 1052, 1123, 1296
BsaWI WCCGGW 3 cut(s) 529, 576, 612
Bsc4I CCNNNNNNNGG 6 cut(s) 360, 382, 523, 804, 1138, 1189
Bse118I RCCGGY 1 cut(s) 887
Bse1I ACTGG 5 cut(s) 455, 1121, 1256, 1327, 1381
Bse8I GATNNNNATC 3 cut(s) 630, 1395, 1455
BseAI TCCGGA 1 cut(s) 529
BseBI CCWGG 3 cut(s) 233, 697, 1298
BseDI CCNNGG 8 cut(s) 152, 347, 369, 695, 1039, 1052, 1123, 1296
BseGI GGATG 6 cut(s) 36, 44, 216, 258, 538, 631
BseJI GATNNNNATC 3 cut(s) 630, 1395, 1455
BseLI CCNNNNNNNGG 6 cut(s) 360, 382, 523, 804, 1138, 1189
BseMII CTCAG 2 cut(s) 125, 1128
BseNI ACTGG 5 cut(s) 455, 1121, 1256, 1327, 1381
BseRI GAGGAG 1 cut(s) 56
BseSI GKGCMC 1 cut(s) 355
BseX3I CGGCCG 1 cut(s) 1386
BseXI GCAGC 4 cut(s) 388, 483, 511, 1227
BsgI GTGCAG 1 cut(s) 482
Bsh1236I CGCG 3 cut(s) 293, 371, 411
Bsh1285I CGRYCG 2 cut(s) 202, 1389
BshFI GGCC 8 cut(s) 132, 353, 374, 389, 676, 1069, 1122, 1388
BshNI GGYRCC 2 cut(s) 156, 513
BsiEI CGRYCG 2 cut(s) 202, 1389
BsiHKAI GWGCWC 1 cut(s) 850
BsiSI CCGG 8 cut(s) 361, 518, 530, 577, 613, 677, 888, 1195
BslFI GGGAC 1 cut(s) 1244
BslI CCNNNNNNNGG 6 cut(s) 360, 382, 523, 804, 1138, 1189
BsmAI GTCTC 3 cut(s) 182, 1049, 1465
BsmBI CGTCTC 1 cut(s) 1465
BsmFI GGGAC 1 cut(s) 1244
BsmI GAATGC 1 cut(s) 311
BsnI GGCC 8 cut(s) 132, 353, 374, 389, 676, 1069, 1122, 1388
Bso31I GGTCTC 2 cut(s) 182, 1049
Bsp120I GGGCCC 1 cut(s) 351
Bsp1286I GDGCHC 2 cut(s) 355, 850
Bsp13I TCCGGA 1 cut(s) 529
Bsp143I GATC 6 cut(s) 327, 337, 363, 520, 631, 1323
Bsp19I CCATGG 2 cut(s) 152, 1123
BspACI CCGC 9 cut(s) 18, 128, 241, 369, 371, 386, 426, 875, 1289
BspANI GGCC 8 cut(s) 132, 353, 374, 389, 676, 1069, 1122, 1388
BspCNI CTCAG 2 cut(s) 124, 1129
BspEI TCCGGA 1 cut(s) 529
BspFNI CGCG 3 cut(s) 293, 371, 411
BspLI GGNNCC 8 cut(s) 158, 329, 345, 353, 515, 528, 759, 1121
BspMAI CTGCAG 1 cut(s) 501
BspOI GCTAGC 1 cut(s) 1365
BspPI GGATC 5 cut(s) 322, 335, 371, 528, 1318
BspT107I GGYRCC 2 cut(s) 156, 513
BspTNI GGTCTC 2 cut(s) 182, 1049
BsrBI CCGCTC 1 cut(s) 20
BsrFI RCCGGY 1 cut(s) 887
BsrI ACTGG 5 cut(s) 455, 1121, 1256, 1327, 1381
BssAI RCCGGY 1 cut(s) 887
BssECI CCNNGG 8 cut(s) 152, 347, 369, 695, 1039, 1052, 1123, 1296
BssMI GATC 6 cut(s) 327, 337, 363, 520, 631, 1323
BssNI GRCGYC 2 cut(s) 149, 271
BssT1I CCWWGG 3 cut(s) 152, 1052, 1123
Bst2UI CCWGG 3 cut(s) 233, 697, 1298
Bst4CI ACNGT 3 cut(s) 620, 824, 909
BstACI GRCGYC 2 cut(s) 149, 271
BstC8I GCNNGC 5 cut(s) 22, 26, 130, 238, 1363
BstDEI CTNAG 6 cut(s) 111, 732, 834, 1137, 1143, 1184
BstDSI CCRYGG 5 cut(s) 152, 347, 369, 1039, 1123
BstF5I GGATG 6 cut(s) 36, 44, 216, 258, 538, 631
BstFNI CGCG 3 cut(s) 293, 371, 411
BstHHI GCGC 2 cut(s) 293, 586
BstKTI GATC 6 cut(s) 330, 340, 366, 523, 634, 1326
BstMAI GTCTC 3 cut(s) 182, 1049, 1465
BstMBI GATC 6 cut(s) 327, 337, 363, 520, 631, 1323
BstMCI CGRYCG 2 cut(s) 202, 1389
BstMWI GCNNNNNNNGC 2 cut(s) 11, 1371
BstNI CCWGG 3 cut(s) 233, 697, 1298
BstNSI RCATGY 1 cut(s) 1213
BstSCI CCNGG 6 cut(s) 231, 359, 516, 695, 1194, 1296
BstSFI CTRYAG 2 cut(s) 244, 497
BstSLI GKGCMC 1 cut(s) 355
BstUI CGCG 3 cut(s) 293, 371, 411
BstV1I GCAGC 4 cut(s) 388, 483, 511, 1227
BstV2I GAAGAC 1 cut(s) 125
BstX2I RGATCY 3 cut(s) 327, 363, 1323
BstYI RGATCY 3 cut(s) 327, 363, 1323
BstZI CGGCCG 1 cut(s) 1386
BsuRI GGCC 8 cut(s) 132, 353, 374, 389, 676, 1069, 1122, 1388
BtgI CCRYGG 5 cut(s) 152, 347, 369, 1039, 1123
BtsCI GGATG 6 cut(s) 36, 44, 216, 258, 538, 631
BtsI GCAGTG 1 cut(s) 220
BtsIMutI CAGTG 2 cut(s) 220, 923
Cac8I GCNNGC 5 cut(s) 22, 26, 130, 238, 1363
CaiI CAGNNNCTG 1 cut(s) 1271
CfoI GCGC 2 cut(s) 293, 586
Cfr10I RCCGGY 1 cut(s) 887
Cfr13I GGNCC 9 cut(s) 130, 351, 352, 373, 660, 960, 1068, 1120, 1192
Cfr42I CCGCGG 1 cut(s) 372
CseI GACGC 3 cut(s) 157, 260, 848
Csp6I GTAC 6 cut(s) 397, 448, 514, 616, 621, 1231
CviAII CATG 9 cut(s) 153, 475, 544, 587, 987, 1124, 1189, 1210, 1371
CviQI GTAC 6 cut(s) 397, 448, 514, 616, 621, 1231
DdeI CTNAG 6 cut(s) 111, 732, 834, 1137, 1143, 1184
DpnI GATC 6 cut(s) 329, 339, 365, 522, 633, 1325
DpnII GATC 6 cut(s) 327, 337, 363, 520, 631, 1323
DraI TTTAAA 1 cut(s) 1336
EaeI YGGCCR 3 cut(s) 387, 674, 1386
EagI CGGCCG 1 cut(s) 1386
EclXI CGGCCG 1 cut(s) 1386
Eco130I CCWWGG 3 cut(s) 152, 1052, 1123
Eco24I GRGCYC 1 cut(s) 355
Eco31I GGTCTC 2 cut(s) 182, 1049
Eco32I GATATC 2 cut(s) 541, 643
Eco47I GGWCC 3 cut(s) 660, 960, 1192
Eco52I CGGCCG 1 cut(s) 1386
Eco57I CTGAAG 1 cut(s) 1018
EcoRII CCWGG 3 cut(s) 231, 695, 1296
EcoRV GATATC 2 cut(s) 541, 643
EcoT14I CCWWGG 3 cut(s) 152, 1052, 1123
EcoT38I GRGCYC 1 cut(s) 355
ErhI CCWWGG 3 cut(s) 152, 1052, 1123
Esp3I CGTCTC 1 cut(s) 1465
FaeI CATG 9 cut(s) 156, 478, 547, 590, 990, 1127, 1192, 1213, 1374
FaqI GGGAC 1 cut(s) 1244
FatI CATG 9 cut(s) 152, 474, 543, 586, 986, 1123, 1188, 1209, 1370
FauI CCCGC 2 cut(s) 121, 419
FblI GTMKAC 1 cut(s) 87
Fnu4HI GCNGC 7 cut(s) 241, 372, 387, 402, 497, 500, 1241
FokI GGATG 6 cut(s) 23, 31, 203, 245, 545, 638
FriOI GRGCYC 1 cut(s) 355
Fsp4HI GCNGC 7 cut(s) 241, 372, 387, 402, 497, 500, 1241
FspBI CTAG 3 cut(s) 1053, 1362, 1483
FspI TGCGCA 1 cut(s) 585
GlaI GCGC 2 cut(s) 292, 585
GluI GCNGC 7 cut(s) 241, 372, 387, 402, 497, 500, 1241
GsuI CTGGAG 4 cut(s) 362, 401, 1248, 1364
HaeIII GGCC 8 cut(s) 132, 353, 374, 389, 676, 1069, 1122, 1388
HapII CCGG 8 cut(s) 361, 518, 530, 577, 613, 677, 888, 1195
HgaI GACGC 3 cut(s) 157, 260, 848
HhaI GCGC 2 cut(s) 293, 586
Hin1I GRCGYC 2 cut(s) 149, 271
Hin1II CATG 9 cut(s) 156, 478, 547, 590, 990, 1127, 1192, 1213, 1374
Hin6I GCGC 2 cut(s) 291, 584
HinP1I GCGC 2 cut(s) 291, 584
HincII GTYRAC 2 cut(s) 1060, 1114
HindII GTYRAC 2 cut(s) 1060, 1114
HinfI GANTC 5 cut(s) 466, 590, 1268, 1292, 1456
HpaI GTTAAC 1 cut(s) 1060
HpaII CCGG 8 cut(s) 361, 518, 530, 577, 613, 677, 888, 1195
HphI GGTGA 3 cut(s) 427, 472, 1208
Hpy166II GTNNAC 5 cut(s) 88, 97, 480, 1060, 1114
Hpy188I TCNGA 6 cut(s) 114, 184, 323, 713, 807, 1138
Hpy8I GTNNAC 5 cut(s) 88, 97, 480, 1060, 1114
Hpy99I CGWCG 5 cut(s) 53, 86, 151, 188, 276
HpyAV CCTTC 9 cut(s) 50, 187, 291, 673, 748, 941, 1365, 1420, 1432
HpyCH4III ACNGT 3 cut(s) 620, 824, 909
HpyCH4V TGCA 5 cut(s) 463, 499, 944, 1349, 1374
HpyF10VI GCNNNNNNNGC 2 cut(s) 11, 1371
HpyF3I CTNAG 6 cut(s) 111, 732, 834, 1137, 1143, 1184
Hsp92I GRCGYC 2 cut(s) 149, 271
Hsp92II CATG 9 cut(s) 156, 478, 547, 590, 990, 1127, 1192, 1213, 1374
HspAI GCGC 2 cut(s) 291, 584
Kpn2I TCCGGA 1 cut(s) 529
KpnI GGTACC 1 cut(s) 517
KspAI GTTAAC 1 cut(s) 1060
KspI CCGCGG 1 cut(s) 372
Kzo9I GATC 6 cut(s) 327, 337, 363, 520, 631, 1323
LmnI GCTCC 5 cut(s) 230, 343, 507, 679, 757
Lsp1109I GCAGC 4 cut(s) 388, 483, 511, 1227
MaeI CTAG 3 cut(s) 1053, 1362, 1483
MaeIII GTNAC 2 cut(s) 813, 824
MalI GATC 6 cut(s) 329, 339, 365, 522, 633, 1325
MbiI CCGCTC 1 cut(s) 20
MboI GATC 6 cut(s) 327, 337, 363, 520, 631, 1323
MboII GAAGA 4 cut(s) 130, 310, 641, 1024
MflI RGATCY 3 cut(s) 327, 363, 1323
MhlI GDGCHC 2 cut(s) 355, 850
MluCI AATT 1 cut(s) 313
MlyI GAGTC 1 cut(s) 475
MmeI TCCRAC 2 cut(s) 207, 725
MroI TCCGGA 1 cut(s) 529
MseI TTAA 6 cut(s) 573, 819, 1004, 1059, 1335, 1478
MslI CAYNNNNRTG 1 cut(s) 836
MspA1I CMGCKG 1 cut(s) 371
MspI CCGG 8 cut(s) 361, 518, 530, 577, 613, 677, 888, 1195
MspR9I CCNGG 6 cut(s) 233, 361, 518, 697, 1196, 1298
Mva1269I GAATGC 1 cut(s) 311
MvaI CCWGG 3 cut(s) 233, 697, 1298
MvnI CGCG 3 cut(s) 293, 371, 411
MwoI GCNNNNNNNGC 2 cut(s) 11, 1371
NciI CCSGG 3 cut(s) 361, 518, 1196
NcoI CCATGG 2 cut(s) 152, 1123
NdeII GATC 6 cut(s) 327, 337, 363, 520, 631, 1323
NheI GCTAGC 1 cut(s) 1361
NlaIII CATG 9 cut(s) 156, 478, 547, 590, 990, 1127, 1192, 1213, 1374
NlaIV GGNNCC 8 cut(s) 158, 329, 345, 353, 515, 528, 759, 1121
NsbI TGCGCA 1 cut(s) 585
NspI RCATGY 1 cut(s) 1213
PciI ACATGT 1 cut(s) 1209
PcsI WCGNNNNNNNCGW 2 cut(s) 81, 290
PctI GAATGC 1 cut(s) 311
PfeI GAWTC 4 cut(s) 590, 1268, 1292, 1456
PflFI GACNNNGTC 1 cut(s) 1196
PkrI GCNGC 7 cut(s) 242, 373, 388, 403, 498, 501, 1242
PleI GAGTC 1 cut(s) 474
PpsI GAGTC 1 cut(s) 474
PscI ACATGT 1 cut(s) 1209
PshBI ATTAAT 1 cut(s) 1004
Psp6I CCWGG 3 cut(s) 231, 695, 1296
PspGI CCWGG 3 cut(s) 231, 695, 1296
PspN4I GGNNCC 8 cut(s) 158, 329, 345, 353, 515, 528, 759, 1121
PspOMI GGGCCC 1 cut(s) 351
PspPI GGNCC 9 cut(s) 130, 351, 352, 373, 660, 960, 1068, 1120, 1192
PstI CTGCAG 1 cut(s) 501
PstNI CAGNNNCTG 1 cut(s) 1271
PsuI RGATCY 3 cut(s) 327, 363, 1323
PsyI GACNNNGTC 1 cut(s) 1196
RsaI GTAC 6 cut(s) 398, 449, 515, 617, 622, 1232
RsaNI GTAC 6 cut(s) 397, 448, 514, 616, 621, 1231
RseI CAYNNNNRTG 1 cut(s) 836
SacII CCGCGG 1 cut(s) 372
SaqAI TTAA 6 cut(s) 573, 819, 1004, 1059, 1335, 1478
SatI GCNGC 7 cut(s) 241, 372, 387, 402, 497, 500, 1241
Sau3AI GATC 6 cut(s) 327, 337, 363, 520, 631, 1323
Sau96I GGNCC 9 cut(s) 130, 351, 352, 373, 660, 960, 1068, 1120, 1192
ScaI AGTACT 1 cut(s) 1232
SchI GAGTC 1 cut(s) 475
ScrFI CCNGG 6 cut(s) 233, 361, 518, 697, 1196, 1298
SduI GDGCHC 2 cut(s) 355, 850
SfcI CTRYAG 2 cut(s) 244, 497
Sfr303I CCGCGG 1 cut(s) 372
SgrBI CCGCGG 1 cut(s) 372
SinI GGWCC 3 cut(s) 660, 960, 1192
SmiMI CAYNNNNRTG 1 cut(s) 836
Sse9I AATT 1 cut(s) 313
SsiI CCGC 9 cut(s) 18, 128, 241, 369, 371, 386, 426, 875, 1289
SspMI CTAG 3 cut(s) 1053, 1362, 1483
StyD4I CCNGG 6 cut(s) 231, 359, 516, 695, 1194, 1296
StyI CCWWGG 3 cut(s) 152, 1052, 1123
TaaI ACNGT 3 cut(s) 620, 824, 909
TaqI TCGA 3 cut(s) 141, 469, 1235
TaqII GACCGA 1 cut(s) 216
TasI AATT 1 cut(s) 313
TatI WGTACW 2 cut(s) 447, 1230
TauI GCSGC 3 cut(s) 243, 374, 389
TfiI GAWTC 4 cut(s) 590, 1268, 1292, 1456
Tru1I TTAA 6 cut(s) 573, 819, 1004, 1059, 1335, 1478
Tru9I TTAA 6 cut(s) 573, 819, 1004, 1059, 1335, 1478
TscAI CASTG 2 cut(s) 227, 923
TseI GCWGC 4 cut(s) 401, 496, 499, 1240
TspDTI ATGAA 4 cut(s) 603, 642, 1451, 1469
TspGWI ACGGA 4 cut(s) 37, 638, 952, 1483
TspRI CASTG 2 cut(s) 227, 923
Tth111I GACNNNGTC 1 cut(s) 1196
VpaK11BI GGWCC 3 cut(s) 660, 960, 1192
VspI ATTAAT 1 cut(s) 1004
XceI RCATGY 1 cut(s) 1213
XcmI CCANNNNNNNNNTGG 1 cut(s) 654
XmaJI CCTAGG 1 cut(s) 1052
XmiI GTMKAC 1 cut(s) 87
XspI CTAG 3 cut(s) 1053, 1362, 1483
ZrmI AGTACT 1 cut(s) 1232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.