MD11G1073700.v1.1

Putative lipopolysaccharide-modifying enzyme.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0012971
Physical Location & Seq
Reverse (-)
6241158 .. 6244018
2861 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1073700.v1.1.491

Sequence Viewer

Length: 1302 bp
ATGGCTCCGAGATCCGCCGGTCCCTCTCACATCCTCCCATCCGTCATCGCCCTCTCCCTTCTCTCTCTCGGCTTCGTTATCTACAAGGTGAACGACTTCGCCACTCAGACCAAGACACTGGCCGTCCACAACCTCGAGCCGACGCCGTGGCACTTCTTCCCACCAAAAACCTTCACCGACGAGACCCTCCACGACCGAGCGTACAAGCTCATCCACTGCTCCTACCTCGCCTGCCGCTACAAAAGCAACGAAGTCCCTGAACGACGCCGTCCTCCATCGTCCCGCGCGAAAGCCCCGAAATGCCCCGAGTTCTTCCGTTGGATCCACCACGATCTGGAGCCCTGGGCCCGGACCCGGATCTCCGCCGCCCATTTGGAGACCGCCAAGCAATACGCGGCGTTCCGCGTGGTGATTGTTGACGGGAGGCTGTATGTGGATTTGTACTGGGCTTGCGTGCAGAGCCGCGCCATGTTCACCATTTGGGGTTTTCTGCAGCTCCTTGCCAGGTATCCGGGTCGAGTTCCGGATGTGGATATCATGTTTGATTGTATGGATAAGCCCATCATCAACCGGCCGAGCACCAATCGATGCCTTTGCCGGTTTTCCGGTATTGCACGGACGGTGATCACTTTGATATCCCATTTCCTGATTGGTCCTTCTGGGGTTGTTTATGATTACTGCACAGGCCAGAGCTTAACATTCATCCCTGGGAAGAGCAGTTCCGAGAAATCAAGTGGGGAAAGAAGTTGGAAAAAGAAGGAGCCTTTTGCATATTGGAAAGGAAACCCAAATGTTAGTTCCCCCGTTCGTACAGAGTTACTTAACTGCAACGACACGAAGATGTGGAGTGCGCAGGTTATGCGTCAGGATTGGGAAGCGGAAGCAAGAGCTGGTTATGAGCAGTCCAAACTCTCTAAGCAGTGTAATCATCAGTACAAAATCTATGCAGAAGGCTATGCTTGGTCGGTCAGCTTGAAATATATCGTATCATGTGGTTCTCTTACACTAATAATAACACCGCAATATGAGGATTTCTTAAGCCGCGGTCTCATTCCTAAGATTAATTATTGGCCCATCTCCCCTAACGCTATATGCCCGTCCATAAAGTCTGCTGTTGACTGGGCTCTTGGACACCAATCTGAGGCTAAGGCAATGGGACAAAGAGGGCAGGATTTCATGGAAAGCTTAAGCATGGATCGGGTCTATGATTACATGTTTCACCTCATAACGGAGTACTCAAAGCTGCTGGACTTCAAGCTAGACATTCCAGCTTCTGCCAGAATCCCTGCTTTGTCTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00514 map00514
Pfam Domains
Protein Families
Glyco_transf_90

Protein Analysis

434

Amino Acids

49.45

Weight (kDa)

9.08

Isoelectric Point (pI)

44.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_90 PF05686 98 - 426 4.7e-105 Glycosyl transferase family 90
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012971)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07220
fragaria_vesca FvH4_3g38610
malus_domestica MD03G1069900.v1.1 MD11G1073700.v1.1 MD17G1174000.v1.1
prunus_persica Prupe.6G057000_v2.0.a1
pyrus_communis pycom03g05560
rosa_chinensis RchiOBHm_Chr5g0069671
rosa_laevigata RLG00000036083
rosa_multiflora Rmu_sc0007688.1_g000001 Rmu_sc0021095.1_g000001
rosa_roxburghii Rroxscaffold_1G00011410
rosa_rugosa Rorug05G0399200
rosa_samantha Rh5AG455900 Rh5BG474900 Rh5CG498400 Rh5DG486400
rosa_wichuraiana Rw5G042540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 852
Acc36I ACCTGC 1 cut(s) 844
AccB7I CCANNNNNTGG 1 cut(s) 334
AccII CGCG 6 cut(s) 285, 287, 395, 405, 465, 1044
AccIII TCCGGA 1 cut(s) 523
AclWI GGATC 5 cut(s) 6, 316, 329, 365, 1203
AcoI YGGCCR 2 cut(s) 120, 572
AcyI GRCGYC 2 cut(s) 143, 265
AfaI GTAC 5 cut(s) 203, 443, 811, 935, 1235
AfiI CCNNNNNNNGG 5 cut(s) 334, 348, 354, 1141, 1228
AflII CTTAAG 2 cut(s) 1036, 1186
AflIII ACRYGT 1 cut(s) 1212
AgsI TTSAA 2 cut(s) 976, 1255
AjnI CCWGG 3 cut(s) 341, 503, 706
AjuI GAANNNNNNNTTGG 2 cut(s) 781, 813
AloI GAACNNNNNNTCC 2 cut(s) 703, 735
AluBI AGCT 9 cut(s) 208, 496, 693, 890, 972, 1185, 1243, 1258, 1271
AluI AGCT 9 cut(s) 208, 496, 693, 890, 972, 1185, 1243, 1258, 1271
Alw21I GWGCWC 1 cut(s) 581
Alw26I GTCTC 3 cut(s) 176, 371, 1052
AlwI GGATC 5 cut(s) 6, 316, 329, 365, 1203
AlwNI CAGNNNCTG 1 cut(s) 1274
Ama87I CYCGRG 2 cut(s) 134, 305
Aor13HI TCCGGA 1 cut(s) 523
AoxI GGCC 5 cut(s) 120, 345, 572, 685, 1070
ApaI GGGCCC 1 cut(s) 349
ApeKI GCWGC 2 cut(s) 493, 1243
AseI ATTAAT 1 cut(s) 1062
Asp700I GAANNNNTTC 1 cut(s) 95
AspLEI GCGC 3 cut(s) 287, 467, 853
AspS9I GGNCC 6 cut(s) 20, 345, 346, 351, 653, 1071
AsuC2I CCSGG 3 cut(s) 349, 355, 513
AsuHPI GGTGA 6 cut(s) 100, 166, 421, 466, 634, 1211
AvaI CYCGRG 2 cut(s) 134, 305
AvaII GGWCC 3 cut(s) 20, 351, 653
BaeGI GKGCMC 1 cut(s) 349
BamHI GGATCC 1 cut(s) 321
BanII GRGCYC 3 cut(s) 342, 349, 1126
Bbv12I GWGCWC 1 cut(s) 581
BbvI GCAGC 2 cut(s) 505, 1230
BccI CCATC 4 cut(s) 46, 283, 569, 1082
BceAI ACGGC 3 cut(s) 107, 130, 252
BcgI CGANNNNNNTGC 2 cut(s) 576, 610
BciT130I CCWGG 3 cut(s) 343, 505, 708
BciVI GTATCC 1 cut(s) 519
BclI TGATCA 1 cut(s) 624
BcnI CCSGG 3 cut(s) 349, 355, 513
BcoDI GTCTC 3 cut(s) 176, 371, 1052
BfaI CTAG 1 cut(s) 1259
BfmI CTRYAG 1 cut(s) 491
BfrI CTTAAG 2 cut(s) 1036, 1186
BfuAI ACCTGC 1 cut(s) 844
BfuI GTATCC 1 cut(s) 519
BisI GCNGC 7 cut(s) 235, 366, 396, 463, 494, 1042, 1244
BlsI GCNGC 7 cut(s) 236, 367, 397, 464, 495, 1043, 1245
BmcAI AGTACT 1 cut(s) 1235
Bme1390I CCNGG 6 cut(s) 343, 349, 355, 505, 513, 708
Bme18I GGWCC 3 cut(s) 20, 351, 653
BmeT110I CYCGRG 2 cut(s) 134, 305
BmgT120I GGNCC 6 cut(s) 20, 345, 346, 351, 653, 1071
BmiI GGNNCC 7 cut(s) 6, 22, 323, 339, 347, 353, 762
BmrFI CCNGG 6 cut(s) 343, 349, 355, 505, 513, 708
BmrI ACTGGG 2 cut(s) 454, 1129
BmsI GCATC 1 cut(s) 578
BmuI ACTGGG 2 cut(s) 454, 1129
BpmI CTGGAG 1 cut(s) 356
Bpu10I CCTNAGC 1 cut(s) 1146
BpuMI CCSGG 3 cut(s) 349, 355, 513
Bsa29I ATCGAT 1 cut(s) 586
BsaHI GRCGYC 2 cut(s) 143, 265
BsaI GGTCTC 3 cut(s) 176, 371, 1052
BsaJI CCNNGG 6 cut(s) 146, 341, 342, 706, 707, 1042
BsaWI WCCGGW 2 cut(s) 523, 605
Bsc4I CCNNNNNNNGG 5 cut(s) 334, 348, 354, 1141, 1228
Bse118I RCCGGY 3 cut(s) 17, 570, 597
Bse1I ACTGG 3 cut(s) 123, 449, 1124
Bse3DI GCAATG 1 cut(s) 1158
BseAI TCCGGA 1 cut(s) 523
BseBI CCWGG 3 cut(s) 343, 505, 708
BseCI ATCGAT 1 cut(s) 586
BseDI CCNNGG 6 cut(s) 146, 341, 342, 706, 707, 1042
BseGI GGATG 5 cut(s) 30, 38, 210, 532, 702
BseLI CCNNNNNNNGG 5 cut(s) 334, 348, 354, 1141, 1228
BseMI GCAATG 1 cut(s) 1158
BseMII CTCAG 2 cut(s) 119, 1131
BseNI ACTGG 3 cut(s) 123, 449, 1124
BseSI GKGCMC 1 cut(s) 349
BseX3I CGGCCG 1 cut(s) 572
BseXI GCAGC 2 cut(s) 505, 1230
BsgI GTGCAG 2 cut(s) 476, 664
Bsh1236I CGCG 6 cut(s) 285, 287, 395, 405, 465, 1044
Bsh1285I CGRYCG 2 cut(s) 196, 575
BshFI GGCC 5 cut(s) 122, 347, 574, 687, 1072
BshVI ATCGAT 1 cut(s) 586
BsiEI CGRYCG 2 cut(s) 196, 575
BsiHKAI GWGCWC 1 cut(s) 581
BsiHKCI CYCGRG 2 cut(s) 134, 305
BsiSI CCGG 8 cut(s) 18, 349, 355, 512, 524, 571, 598, 606
BslFI GGGAC 4 cut(s) 6, 239, 265, 1170
BslI CCNNNNNNNGG 5 cut(s) 334, 348, 354, 1141, 1228
BsmAI GTCTC 3 cut(s) 176, 371, 1052
BsmFI GGGAC 4 cut(s) 6, 239, 265, 1170
BsnI GGCC 5 cut(s) 122, 347, 574, 687, 1072
Bso31I GGTCTC 3 cut(s) 176, 371, 1052
BsoBI CYCGRG 2 cut(s) 134, 305
Bsp120I GGGCCC 1 cut(s) 345
Bsp1286I GDGCHC 4 cut(s) 342, 349, 581, 1126
Bsp13I TCCGGA 1 cut(s) 523
Bsp143I GATC 6 cut(s) 11, 321, 331, 357, 624, 1195
BspANI GGCC 5 cut(s) 122, 347, 574, 687, 1072
BspCNI CTCAG 2 cut(s) 118, 1132
BspDI ATCGAT 1 cut(s) 586
BspEI TCCGGA 1 cut(s) 523
BspFNI CGCG 6 cut(s) 285, 287, 395, 405, 465, 1044
BspLI GGNNCC 7 cut(s) 6, 22, 323, 339, 347, 353, 762
BspMAI CTGCAG 1 cut(s) 495
BspMI ACCTGC 1 cut(s) 844
BspPI GGATC 5 cut(s) 6, 316, 329, 365, 1203
BspQI GCTCTTC 1 cut(s) 707
BspTI CTTAAG 2 cut(s) 1036, 1186
BspTNI GGTCTC 3 cut(s) 176, 371, 1052
BsrDI GCAATG 1 cut(s) 1158
BsrFI RCCGGY 3 cut(s) 17, 570, 597
BsrI ACTGG 3 cut(s) 123, 449, 1124
BssAI RCCGGY 3 cut(s) 17, 570, 597
BssECI CCNNGG 6 cut(s) 146, 341, 342, 706, 707, 1042
BssMI GATC 6 cut(s) 11, 321, 331, 357, 624, 1195
BssNI GRCGYC 2 cut(s) 143, 265
Bst2UI CCWGG 3 cut(s) 343, 505, 708
Bst4CI ACNGT 1 cut(s) 622
Bst6I CTCTTC 1 cut(s) 707
BstACI GRCGYC 2 cut(s) 143, 265
BstAFI CTTAAG 2 cut(s) 1036, 1186
BstAPI GCANNNNNTGC 1 cut(s) 859
BstC8I GCNNGC 3 cut(s) 232, 451, 455
BstDEI CTNAG 5 cut(s) 105, 915, 1056, 1140, 1146
BstDSI CCRYGG 2 cut(s) 146, 1042
BstF5I GGATG 5 cut(s) 30, 38, 210, 532, 702
BstFNI CGCG 6 cut(s) 285, 287, 395, 405, 465, 1044
BstHHI GCGC 3 cut(s) 287, 467, 853
BstKTI GATC 6 cut(s) 14, 324, 334, 360, 627, 1198
BstMAI GTCTC 3 cut(s) 176, 371, 1052
BstMBI GATC 6 cut(s) 11, 321, 331, 357, 624, 1195
BstMCI CGRYCG 2 cut(s) 196, 575
BstMWI GCNNNNNNNGC 3 cut(s) 243, 459, 859
BstNI CCWGG 3 cut(s) 343, 505, 708
BstNSI RCATGY 1 cut(s) 1216
BstSCI CCNGG 6 cut(s) 341, 347, 353, 503, 511, 706
BstSFI CTRYAG 1 cut(s) 491
BstSLI GKGCMC 1 cut(s) 349
BstUI CGCG 6 cut(s) 285, 287, 395, 405, 465, 1044
BstV1I GCAGC 2 cut(s) 505, 1230
BstX2I RGATCY 3 cut(s) 11, 321, 357
BstXI CCANNNNNNTGG 1 cut(s) 118
BstYI RGATCY 3 cut(s) 11, 321, 357
BstZI CGGCCG 1 cut(s) 572
Bsu15I ATCGAT 1 cut(s) 586
BsuI GTATCC 1 cut(s) 519
BsuRI GGCC 5 cut(s) 122, 347, 574, 687, 1072
BsuTUI ATCGAT 1 cut(s) 586
BtgI CCRYGG 2 cut(s) 146, 1042
BtgZI GCGATG 1 cut(s) 31
BtsCI GGATG 5 cut(s) 30, 38, 210, 532, 702
BtsI GCAGTG 2 cut(s) 214, 926
BtsIMutI CAGTG 3 cut(s) 116, 214, 926
BveI ACCTGC 1 cut(s) 844
Cac8I GCNNGC 3 cut(s) 232, 451, 455
CaiI CAGNNNCTG 1 cut(s) 1274
CfoI GCGC 3 cut(s) 287, 467, 853
Cfr10I RCCGGY 3 cut(s) 17, 570, 597
Cfr13I GGNCC 6 cut(s) 20, 345, 346, 351, 653, 1071
Cfr42I CCGCGG 1 cut(s) 1045
ClaI ATCGAT 1 cut(s) 586
CseI GACGC 3 cut(s) 151, 273, 851
Csp6I GTAC 5 cut(s) 202, 442, 810, 934, 1234
CviAII CATG 6 cut(s) 469, 538, 990, 1177, 1192, 1213
CviQI GTAC 5 cut(s) 202, 442, 810, 934, 1234
DdeI CTNAG 5 cut(s) 105, 915, 1056, 1140, 1146
DpnI GATC 6 cut(s) 13, 323, 333, 359, 626, 1197
DpnII GATC 6 cut(s) 11, 321, 331, 357, 624, 1195
EaeI YGGCCR 2 cut(s) 120, 572
EagI CGGCCG 1 cut(s) 572
Eam1104I CTCTTC 1 cut(s) 707
EarI CTCTTC 1 cut(s) 707
EciI GGCGGA 2 cut(s) 4, 352
EclXI CGGCCG 1 cut(s) 572
Eco24I GRGCYC 3 cut(s) 342, 349, 1126
Eco31I GGTCTC 3 cut(s) 176, 371, 1052
Eco32I GATATC 2 cut(s) 535, 636
Eco47I GGWCC 3 cut(s) 20, 351, 653
Eco52I CGGCCG 1 cut(s) 572
Eco88I CYCGRG 2 cut(s) 134, 305
EcoRII CCWGG 3 cut(s) 341, 503, 706
EcoRV GATATC 2 cut(s) 535, 636
EcoT38I GRGCYC 3 cut(s) 342, 349, 1126
FaeI CATG 6 cut(s) 472, 541, 993, 1180, 1195, 1216
FaqI GGGAC 4 cut(s) 6, 239, 265, 1170
FatI CATG 6 cut(s) 468, 537, 989, 1176, 1191, 1212
FauI CCCGC 1 cut(s) 290
FbaI TGATCA 1 cut(s) 624
Fnu4HI GCNGC 7 cut(s) 235, 366, 396, 463, 494, 1042, 1244
FokI GGATG 5 cut(s) 17, 25, 197, 539, 689
FriOI GRGCYC 3 cut(s) 342, 349, 1126
Fsp4HI GCNGC 7 cut(s) 235, 366, 396, 463, 494, 1042, 1244
FspBI CTAG 1 cut(s) 1259
FspI TGCGCA 1 cut(s) 852
GlaI GCGC 3 cut(s) 286, 466, 852
GluI GCNGC 7 cut(s) 235, 366, 396, 463, 494, 1042, 1244
GsuI CTGGAG 1 cut(s) 356
HaeIII GGCC 5 cut(s) 122, 347, 574, 687, 1072
HapII CCGG 8 cut(s) 18, 349, 355, 512, 524, 571, 598, 606
HgaI GACGC 3 cut(s) 151, 273, 851
HhaI GCGC 3 cut(s) 287, 467, 853
Hin1I GRCGYC 2 cut(s) 143, 265
Hin1II CATG 6 cut(s) 472, 541, 993, 1180, 1195, 1216
Hin6I GCGC 3 cut(s) 285, 465, 851
HinP1I GCGC 3 cut(s) 285, 465, 851
HincII GTYRAC 2 cut(s) 418, 1117
HindII GTYRAC 2 cut(s) 418, 1117
HindIII AAGCTT 1 cut(s) 1183
HinfI GANTC 1 cut(s) 1281
HpaII CCGG 8 cut(s) 18, 349, 355, 512, 524, 571, 598, 606
HphI GGTGA 6 cut(s) 100, 166, 421, 466, 634, 1211
Hpy166II GTNNAC 5 cut(s) 91, 127, 418, 474, 1117
Hpy188I TCNGA 4 cut(s) 9, 108, 724, 1141
Hpy188III TCNNGA 4 cut(s) 335, 524, 646, 866
Hpy8I GTNNAC 5 cut(s) 91, 127, 418, 474, 1117
Hpy99I CGWCG 3 cut(s) 145, 182, 267
HpyAV CCTTC 5 cut(s) 68, 181, 666, 751, 944
HpyCH4III ACNGT 1 cut(s) 622
HpyCH4V TGCA 7 cut(s) 457, 493, 614, 681, 770, 828, 947
HpyF10VI GCNNNNNNNGC 3 cut(s) 243, 459, 859
HpyF3I CTNAG 5 cut(s) 105, 915, 1056, 1140, 1146
Hsp92I GRCGYC 2 cut(s) 143, 265
Hsp92II CATG 6 cut(s) 472, 541, 993, 1180, 1195, 1216
HspAI GCGC 3 cut(s) 285, 465, 851
Kpn2I TCCGGA 1 cut(s) 523
Ksp22I TGATCA 1 cut(s) 624
KspI CCGCGG 1 cut(s) 1045
Kzo9I GATC 6 cut(s) 11, 321, 331, 357, 624, 1195
LguI GCTCTTC 1 cut(s) 707
LmnI GCTCC 5 cut(s) 10, 224, 337, 501, 760
Lsp1109I GCAGC 2 cut(s) 505, 1230
LweI GCATC 1 cut(s) 578
MaeI CTAG 1 cut(s) 1259
MaeIII GTNAC 1 cut(s) 816
MalI GATC 6 cut(s) 13, 323, 333, 359, 626, 1197
MboI GATC 6 cut(s) 11, 321, 331, 357, 624, 1195
MboII GAAGA 4 cut(s) 148, 304, 724, 850
MflI RGATCY 3 cut(s) 11, 321, 357
MhlI GDGCHC 4 cut(s) 342, 349, 581, 1126
MluCI AATT 1 cut(s) 1063
MmeI TCCRAC 2 cut(s) 299, 728
MroI TCCGGA 1 cut(s) 523
MroXI GAANNNNTTC 1 cut(s) 95
MseI TTAA 5 cut(s) 695, 822, 1037, 1062, 1187
MslI CAYNNNNRTG 1 cut(s) 839
MspA1I CMGCKG 1 cut(s) 1044
MspCI CTTAAG 2 cut(s) 1036, 1186
MspI CCGG 8 cut(s) 18, 349, 355, 512, 524, 571, 598, 606
MspR9I CCNGG 6 cut(s) 343, 349, 355, 505, 513, 708
MvaI CCWGG 3 cut(s) 343, 505, 708
MvnI CGCG 6 cut(s) 285, 287, 395, 405, 465, 1044
MwoI GCNNNNNNNGC 3 cut(s) 243, 459, 859
NciI CCSGG 3 cut(s) 349, 355, 513
NdeII GATC 6 cut(s) 11, 321, 331, 357, 624, 1195
NlaIII CATG 6 cut(s) 472, 541, 993, 1180, 1195, 1216
NlaIV GGNNCC 7 cut(s) 6, 22, 323, 339, 347, 353, 762
NmeAIII GCCGAG 2 cut(s) 48, 600
NsbI TGCGCA 1 cut(s) 852
NspI RCATGY 1 cut(s) 1216
PaeR7I CTCGAG 1 cut(s) 134
PasI CCCWGGG 2 cut(s) 342, 707
PciI ACATGT 1 cut(s) 1212
PciSI GCTCTTC 1 cut(s) 707
PcsI WCGNNNNNNNCGW 1 cut(s) 284
PdmI GAANNNNTTC 1 cut(s) 95
PfeI GAWTC 1 cut(s) 1281
PflFI GACNNNGTC 1 cut(s) 267
PflMI CCANNNNNTGG 1 cut(s) 334
PkrI GCNGC 7 cut(s) 236, 367, 397, 464, 495, 1043, 1245
PscI ACATGT 1 cut(s) 1212
PshBI ATTAAT 1 cut(s) 1062
Psp6I CCWGG 3 cut(s) 341, 503, 706
PspGI CCWGG 3 cut(s) 341, 503, 706
PspN4I GGNNCC 7 cut(s) 6, 22, 323, 339, 347, 353, 762
PspOMI GGGCCC 1 cut(s) 345
PspPI GGNCC 6 cut(s) 20, 345, 346, 351, 653, 1071
PspXI VCTCGAGB 1 cut(s) 134
PstI CTGCAG 1 cut(s) 495
PstNI CAGNNNCTG 1 cut(s) 1274
PsuI RGATCY 3 cut(s) 11, 321, 357
PsyI GACNNNGTC 1 cut(s) 267
RsaI GTAC 5 cut(s) 203, 443, 811, 935, 1235
RsaNI GTAC 5 cut(s) 202, 442, 810, 934, 1234
RseI CAYNNNNRTG 1 cut(s) 839
SacII CCGCGG 1 cut(s) 1045
SapI GCTCTTC 1 cut(s) 707
SaqAI TTAA 5 cut(s) 695, 822, 1037, 1062, 1187
SatI GCNGC 7 cut(s) 235, 366, 396, 463, 494, 1042, 1244
Sau3AI GATC 6 cut(s) 11, 321, 331, 357, 624, 1195
Sau96I GGNCC 6 cut(s) 20, 345, 346, 351, 653, 1071
ScaI AGTACT 1 cut(s) 1235
ScrFI CCNGG 6 cut(s) 343, 349, 355, 505, 513, 708
SduI GDGCHC 4 cut(s) 342, 349, 581, 1126
SfaNI GCATC 1 cut(s) 578
SfcI CTRYAG 1 cut(s) 491
Sfr274I CTCGAG 1 cut(s) 134
Sfr303I CCGCGG 1 cut(s) 1045
SgrBI CCGCGG 1 cut(s) 1045
SinI GGWCC 3 cut(s) 20, 351, 653
SlaI CTCGAG 1 cut(s) 134
SmiMI CAYNNNNRTG 1 cut(s) 839
SmlI CTYRAG 3 cut(s) 134, 1036, 1186
SmoI CTYRAG 3 cut(s) 134, 1036, 1186
Sse9I AATT 1 cut(s) 1063
SspMI CTAG 1 cut(s) 1259
StyD4I CCNGG 6 cut(s) 341, 347, 353, 503, 511, 706
TaaI ACNGT 1 cut(s) 622
TaqI TCGA 3 cut(s) 135, 517, 586
TaqII GACCGA 2 cut(s) 210, 955
TasI AATT 1 cut(s) 1063
TatI WGTACW 3 cut(s) 441, 933, 1233
TauI GCSGC 5 cut(s) 237, 368, 398, 465, 1044
TfiI GAWTC 1 cut(s) 1281
Tru1I TTAA 5 cut(s) 695, 822, 1037, 1062, 1187
Tru9I TTAA 5 cut(s) 695, 822, 1037, 1062, 1187
TscAI CASTG 3 cut(s) 123, 221, 926
TseI GCWGC 2 cut(s) 493, 1243
TspDTI ATGAA 2 cut(s) 691, 1165
TspGWI ACGGA 4 cut(s) 31, 305, 631, 1244
TspRI CASTG 3 cut(s) 123, 221, 926
Tth111I GACNNNGTC 1 cut(s) 267
Van91I CCANNNNNTGG 1 cut(s) 334
Vha464I CTTAAG 2 cut(s) 1036, 1186
VpaK11BI GGWCC 3 cut(s) 20, 351, 653
VspI ATTAAT 1 cut(s) 1062
XceI RCATGY 1 cut(s) 1216
XcmI CCANNNNNNNNNTGG 1 cut(s) 647
XhoI CTCGAG 1 cut(s) 134
XmnI GAANNNNTTC 1 cut(s) 95
XspI CTAG 1 cut(s) 1259
ZrmI AGTACT 1 cut(s) 1235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.