RLG00000036083

Putative lipopolysaccharide-modifying enzyme.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0012971
Physical Location & Seq
Forward (+)
75586767 .. 75589708
2942 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036083

Sequence Viewer

Length: 1758 bp
ATGAATAAGAAATTACCTTTGTGGAGGATGATAACGTTTCCCCAAAATAGAAAGGTCTCCTGGGGTCCAAAAGCAGTGGACCTGTGTCTTACACCCGAGATTAGTGGAATCCAATCACGTGTCAGGAGCCTCCACATCCCCACACGTGGCGCTCACTCGTGCGCGTGGGACCCAACGACCCCAAATGCTGCAACAAAACTCATCACCCTCTTCTTCTTCTTCTTCTTCTTCATCATCATGCGAATCTCTCCGAGAACCACCGCTCGATCGCCGAGTTACATTCTCCCCTCCGTCATCGCCTTGTGCTCTCTCTCCCTCCTCTTCATGCTCTACAAGGTGAACGACTTCGCCACTCAGACCAGGACAGTCGCCGGCCACAACCTAGAGCCGACGCCGTGGCACCTCTTCAAGCCCAAGACCTTCAACCACGAGGCGCTCCCCAGCCGGGCCTACAAGCTCCTCCAGTGCTCCTACCTCGCCTGCCGCTACAGAAACCGAGGCAACGACACGGAAGAAGAAGAAGAAGAAAAGCATCGACGTTCTGCTACTTCCGTCGCCAAAGCCCCGAAATGCCCGGAGTTTTTCCGGTGGATTCACCAGGATCTGGAGCCGTGGGCCAAGACCAAGATTTCTAAGGCTCATGTTGAGGAGGCAAAGAGATACGCTGCTTTCCGAGTGGTGATATCTCAAGGGAAGTTGTATGTGGACTTGTACTACGCTTGTGTGCAGAGCCGGGCTATGTTTACGATTTGGGGGTTGTTGCAGATGCTTAAGAGGTACCCTGGGAGAGTTCCCGATGTGGATTTTATGTTTGATTGTATGGACAAGCCTAGCATTAAGAAGACCGAGCACGTCGCAAAGCCTTTGCCGCTGCTCCGGTATTGCACCAATGACGACCACTTTGATATCCCATTTCCTGATTGGTCTTTCTGGGGATGGCCAGAAACAAATATAGAGCCGTGGACTGAGGAGTTCCAGGCTATCAAACTGGGTGGTCAGGAAACGACTTGGAGAAAGAAGGAGCTTCTGGCATATTGGAAAGGAAATCCAGATGTTAGCTCCCGTGTTCGGGAAGAGTTACTCAACTGTAATGATTCAAAGACGTATAGAGCGCAGATAATGCGTCAGGATTGGGATGAGGAAGCAAAGGCTGGTTTCAAGCAGTCCGAACTATCTAAGCAGTGCAATCATCGGTATAAGATCTATGCTGAAGGCTATGCTTGGTCTGTAAGTTTGAAATATATCTTATCATGCGGTTCTCTGGCATTGGTAATAACACCGGAATATGAGGATTTCTTCAGCCGCGGCCTCTTTCCCAAGGTTAACTATTGGCCCATCTCTCCTAATGCAATATGTCCTTCCATAAAATCTGCTGTTGACTGGGGTCATGGACACCTAGCTGAGGCTCAGGCAATAGGAAGAAGAGGGCAGGAGTATATGGAAAACCTAAACATGGATCGAGTCTATGATTACATGTTACATCTCATCACCGAGTACTCAAAGTTGCAGGACTTCAAGCCAGTCCCCCCACGTAATGCCATGGAAGTATGTGCAGATTCTGTGCTTTGTCTTGCTGATGACTCGAAACAGAGGGAATATCTTGAAAAGACAAGGGAAAACTCTGTTCCCACCACCCCTTGCACTCTCCAGCCTCCTGATAGTAATCTCATTAAGAAATGGAAGAAAGAAAAGAAAGATGTATTTCAGACTGTGGAGGATATGAATCTTGTAAATGAGATACCTGGGCCATTGCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00514 map00514
Pfam Domains
Protein Families
Glyco_transf_90

Protein Analysis

586

Amino Acids

68.0

Weight (kDa)

8.79

Isoelectric Point (pI)

49.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_90 PF05686 188 - 574 8.5e-147 Glycosyl transferase family 90
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012971)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07220
fragaria_vesca FvH4_3g38610
malus_domestica MD03G1069900.v1.1 MD11G1073700.v1.1 MD17G1174000.v1.1
prunus_persica Prupe.6G057000_v2.0.a1
pyrus_communis pycom03g05560
rosa_chinensis RchiOBHm_Chr5g0069671
rosa_laevigata RLG00000036083
rosa_multiflora Rmu_sc0007688.1_g000001 Rmu_sc0021095.1_g000001
rosa_roxburghii Rroxscaffold_1G00011410
rosa_rugosa Rorug05G0399200
rosa_samantha Rh5AG455900 Rh5BG474900 Rh5CG498400 Rh5DG486400
rosa_wichuraiana Rw5G042540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 777
AccB1I GGYRCC 2 cut(s) 399, 777
AccB7I CCANNNNNTGG 1 cut(s) 604
AccBSI CCGCTC 1 cut(s) 263
AccII CGCG 2 cut(s) 164, 1305
AciI CCGC 6 cut(s) 261, 484, 869, 1254, 1303, 1305
AclI AACGTT 1 cut(s) 35
AclWI GGATC 2 cut(s) 609, 1464
AcoI YGGCCR 2 cut(s) 373, 938
AcuI CTGAAG 2 cut(s) 1230, 1282
AcvI CACGTG 2 cut(s) 119, 146
AcyI GRCGYC 1 cut(s) 392
AfaI GTAC 3 cut(s) 713, 779, 1496
AfiI CCNNNNNNNGG 7 cut(s) 146, 445, 604, 1068, 1069, 1402, 1453
AflII CTTAAG 1 cut(s) 770
AflIII ACRYGT 3 cut(s) 118, 143, 1473
AgsI TTSAA 7 cut(s) 409, 424, 1098, 1159, 1237, 1516, 1604
AjiI CACGTC 1 cut(s) 853
AjnI CCWGG 6 cut(s) 59, 359, 597, 781, 975, 1741
AluBI AGCT 4 cut(s) 457, 1024, 1059, 1400
AluI AGCT 4 cut(s) 457, 1024, 1059, 1400
Alw21I GWGCWC 3 cut(s) 308, 470, 852
Alw26I GTCTC 1 cut(s) 61
AlwI GGATC 2 cut(s) 609, 1464
AlwNI CAGNNNCTG 2 cut(s) 604, 1559
Ama87I CYCGRG 1 cut(s) 95
AoxI GGCC 7 cut(s) 373, 447, 615, 938, 1306, 1331, 1745
ApeKI GCWGC 3 cut(s) 188, 665, 871
ArsI GACNNNNNNTTYG 2 cut(s) 884, 916
Asp700I GAANNNNTTC 1 cut(s) 344
Asp718I GGTACC 1 cut(s) 777
AspLEI GCGC 4 cut(s) 152, 164, 436, 1114
AspS9I GGNCC 7 cut(s) 65, 79, 169, 447, 615, 1332, 1745
AsuC2I CCSGG 3 cut(s) 446, 575, 734
AsuHPI GGTGA 5 cut(s) 196, 349, 587, 691, 1480
AvaI CYCGRG 1 cut(s) 95
AvaII GGWCC 3 cut(s) 65, 79, 169
BalI TGGCCA 1 cut(s) 940
BanI GGYRCC 2 cut(s) 399, 777
BauI CACGAG 2 cut(s) 157, 428
BbrPI CACGTG 2 cut(s) 119, 146
BbsI GAAGAC 1 cut(s) 848
Bbv12I GWGCWC 3 cut(s) 308, 470, 852
BbvCI CCTCAGC 1 cut(s) 1401
BbvI GCAGC 3 cut(s) 175, 652, 858
BccI CCATC 2 cut(s) 930, 1343
BceAI ACGGC 3 cut(s) 379, 595, 943
BciT130I CCWGG 6 cut(s) 61, 361, 599, 783, 977, 1743
BcnI CCSGG 3 cut(s) 446, 575, 734
BcoDI GTCTC 1 cut(s) 61
BfaI CTAG 3 cut(s) 383, 831, 1397
BfmI CTRYAG 1 cut(s) 487
BfoI RGCGCY 2 cut(s) 153, 437
BfrI CTTAAG 1 cut(s) 770
BglII AGATCT 1 cut(s) 1200
BisI GCNGC 7 cut(s) 189, 484, 666, 869, 872, 1303, 1306
BlsI GCNGC 7 cut(s) 190, 485, 667, 870, 873, 1304, 1307
BmcAI AGTACT 1 cut(s) 1496
Bme1390I CCNGG 9 cut(s) 61, 361, 446, 575, 599, 734, 783, 977, 1743
Bme18I GGWCC 3 cut(s) 65, 79, 169
BmeT110I CYCGRG 1 cut(s) 95
BmgBI CACGTC 1 cut(s) 853
BmgT120I GGNCC 7 cut(s) 65, 79, 169, 447, 615, 1332, 1745
BmiI GGNNCC 7 cut(s) 66, 128, 170, 171, 401, 609, 779
BmrFI CCNGG 9 cut(s) 61, 361, 446, 575, 599, 734, 783, 977, 1743
BmrI ACTGGG 2 cut(s) 998, 1390
BmsI GCATC 2 cut(s) 541, 756
BmuI ACTGGG 2 cut(s) 998, 1390
BoxI GACNNNNGTC 2 cut(s) 84, 1383
BpiI GAAGAC 1 cut(s) 848
BpmI CTGGAG 3 cut(s) 446, 626, 1631
Bpu10I CCTNAGC 2 cut(s) 1401, 1407
BpuEI CTTGAG 1 cut(s) 672
BpuMI CCSGG 3 cut(s) 446, 575, 734
BsaAI YACGTR 3 cut(s) 119, 146, 1532
BsaBI GATNNNNATC 2 cut(s) 1662, 1722
BsaHI GRCGYC 1 cut(s) 392
BsaI GGTCTC 1 cut(s) 61
BsaWI WCCGGW 3 cut(s) 585, 876, 1279
Bsc4I CCNNNNNNNGG 7 cut(s) 146, 445, 604, 1068, 1069, 1402, 1453
Bse118I RCCGGY 1 cut(s) 371
Bse1I ACTGG 4 cut(s) 463, 993, 1385, 1520
Bse3DI GCAATG 1 cut(s) 1748
Bse8I GATNNNNATC 2 cut(s) 1662, 1722
BseBI CCWGG 6 cut(s) 61, 361, 599, 783, 977, 1743
BseGI GGATG 4 cut(s) 33, 135, 941, 1141
BseJI GATNNNNATC 2 cut(s) 1662, 1722
BseLI CCNNNNNNNGG 7 cut(s) 146, 445, 604, 1068, 1069, 1402, 1453
BseMI GCAATG 1 cut(s) 1748
BseMII CTCAG 4 cut(s) 368, 957, 1392, 1421
BseNI ACTGG 4 cut(s) 463, 993, 1385, 1520
BseRI GAGGAG 4 cut(s) 308, 449, 662, 983
BseXI GCAGC 3 cut(s) 175, 652, 858
BseYI CCCAGC 1 cut(s) 440
BsgI GTGCAG 2 cut(s) 746, 1572
Bsh1236I CGCG 2 cut(s) 164, 1305
Bsh1285I CGRYCG 1 cut(s) 269
BshFI GGCC 7 cut(s) 375, 449, 617, 940, 1308, 1333, 1747
BshNI GGYRCC 2 cut(s) 399, 777
BsiEI CGRYCG 1 cut(s) 269
BsiHKAI GWGCWC 3 cut(s) 308, 470, 852
BsiHKCI CYCGRG 1 cut(s) 95
BsiSI CCGG 7 cut(s) 372, 445, 575, 586, 733, 877, 1280
BslFI GGGAC 2 cut(s) 182, 1508
BslI CCNNNNNNNGG 7 cut(s) 146, 445, 604, 1068, 1069, 1402, 1453
BsmAI GTCTC 1 cut(s) 61
BsmFI GGGAC 2 cut(s) 182, 1508
BsnI GGCC 7 cut(s) 375, 449, 617, 940, 1308, 1333, 1747
Bso31I GGTCTC 1 cut(s) 61
BsoBI CYCGRG 1 cut(s) 95
Bsp1286I GDGCHC 3 cut(s) 308, 470, 852
Bsp143I GATC 4 cut(s) 266, 601, 1200, 1456
Bsp19I CCATGG 1 cut(s) 1539
BspACI CCGC 6 cut(s) 261, 484, 869, 1254, 1303, 1305
BspANI GGCC 7 cut(s) 375, 449, 617, 940, 1308, 1333, 1747
BspCNI CTCAG 4 cut(s) 367, 958, 1393, 1420
BspFNI CGCG 2 cut(s) 164, 1305
BspLI GGNNCC 7 cut(s) 66, 128, 170, 171, 401, 609, 779
BspPI GGATC 2 cut(s) 609, 1464
BspT107I GGYRCC 2 cut(s) 399, 777
BspTI CTTAAG 1 cut(s) 770
BspTNI GGTCTC 1 cut(s) 61
BsrBI CCGCTC 1 cut(s) 263
BsrDI GCAATG 1 cut(s) 1748
BsrFI RCCGGY 1 cut(s) 371
BsrI ACTGG 4 cut(s) 463, 993, 1385, 1520
BssAI RCCGGY 1 cut(s) 371
BssMI GATC 4 cut(s) 266, 601, 1200, 1456
BssNI GRCGYC 1 cut(s) 392
BssSI CACGAG 2 cut(s) 157, 428
BssT1I CCWWGG 2 cut(s) 1317, 1539
Bst2BI CACGAG 2 cut(s) 157, 428
Bst2UI CCWGG 6 cut(s) 61, 361, 599, 783, 977, 1743
Bst4CI ACNGT 3 cut(s) 367, 1088, 1711
Bst6I CTCTTC 5 cut(s) 215, 326, 410, 1068, 1417
BstACI GRCGYC 1 cut(s) 392
BstAFI CTTAAG 1 cut(s) 770
BstAPI GCANNNNNTGC 1 cut(s) 1120
BstBAI YACGTR 3 cut(s) 119, 146, 1532
BstC8I GCNNGC 2 cut(s) 373, 481
BstDEI CTNAG 6 cut(s) 354, 633, 966, 1176, 1401, 1407
BstDSI CCRYGG 5 cut(s) 395, 611, 959, 1303, 1539
BstENI CCTNNNNNAGG 1 cut(s) 1400
BstF5I GGATG 4 cut(s) 33, 135, 941, 1141
BstFNI CGCG 2 cut(s) 164, 1305
BstH2I RGCGCY 2 cut(s) 153, 437
BstHHI GCGC 4 cut(s) 152, 164, 436, 1114
BstKTI GATC 4 cut(s) 269, 604, 1203, 1459
BstMAI GTCTC 1 cut(s) 61
BstMBI GATC 4 cut(s) 266, 601, 1200, 1456
BstMCI CGRYCG 1 cut(s) 269
BstMWI GCNNNNNNNGC 2 cut(s) 868, 1120
BstNI CCWGG 6 cut(s) 61, 361, 599, 783, 977, 1743
BstNSI RCATGY 1 cut(s) 1477
BstPAI GACNNNNGTC 2 cut(s) 84, 1383
BstSCI CCNGG 9 cut(s) 59, 359, 444, 573, 597, 732, 781, 975, 1741
BstSFI CTRYAG 1 cut(s) 487
BstUI CGCG 2 cut(s) 164, 1305
BstV1I GCAGC 3 cut(s) 175, 652, 858
BstV2I GAAGAC 1 cut(s) 848
BstX2I RGATCY 2 cut(s) 601, 1200
BstYI RGATCY 2 cut(s) 601, 1200
BsuRI GGCC 7 cut(s) 375, 449, 617, 940, 1308, 1333, 1747
BtgI CCRYGG 5 cut(s) 395, 611, 959, 1303, 1539
BtgZI GCGATG 1 cut(s) 280
BtrI CACGTC 1 cut(s) 853
BtsCI GGATG 4 cut(s) 33, 135, 941, 1141
BtsI GCAGTG 2 cut(s) 81, 1187
BtsIMutI CAGTG 3 cut(s) 81, 470, 1187
Cac8I GCNNGC 2 cut(s) 373, 481
CaiI CAGNNNCTG 2 cut(s) 604, 1559
CfoI GCGC 4 cut(s) 152, 164, 436, 1114
Cfr10I RCCGGY 1 cut(s) 371
Cfr13I GGNCC 7 cut(s) 65, 79, 169, 447, 615, 1332, 1745
Cfr42I CCGCGG 1 cut(s) 1306
CseI GACGC 2 cut(s) 400, 1112
Csp6I GTAC 3 cut(s) 712, 778, 1495
CspCI CAANNNNNGTGG 4 cut(s) 57, 92, 973, 1008
CviAII CATG 8 cut(s) 238, 325, 641, 1251, 1388, 1453, 1474, 1540
CviQI GTAC 3 cut(s) 712, 778, 1495
DdeI CTNAG 6 cut(s) 354, 633, 966, 1176, 1401, 1407
DpnI GATC 4 cut(s) 268, 603, 1202, 1458
DpnII GATC 4 cut(s) 266, 601, 1200, 1456
EaeI YGGCCR 2 cut(s) 373, 938
Eam1104I CTCTTC 5 cut(s) 215, 326, 410, 1068, 1417
EarI CTCTTC 5 cut(s) 215, 326, 410, 1068, 1417
Eco130I CCWWGG 2 cut(s) 1317, 1539
Eco31I GGTCTC 1 cut(s) 61
Eco32I GATATC 2 cut(s) 684, 907
Eco47I GGWCC 3 cut(s) 65, 79, 169
Eco57I CTGAAG 2 cut(s) 1230, 1282
Eco72I CACGTG 2 cut(s) 119, 146
Eco88I CYCGRG 1 cut(s) 95
EcoNI CCTNNNNNAGG 1 cut(s) 1400
EcoO109I RGGNCCY 1 cut(s) 169
EcoRII CCWGG 6 cut(s) 59, 359, 597, 781, 975, 1741
EcoRV GATATC 2 cut(s) 684, 907
EcoT14I CCWWGG 2 cut(s) 1317, 1539
ErhI CCWWGG 2 cut(s) 1317, 1539
FaeI CATG 8 cut(s) 241, 328, 644, 1254, 1391, 1456, 1477, 1543
FaqI GGGAC 2 cut(s) 182, 1508
FatI CATG 8 cut(s) 237, 324, 640, 1250, 1387, 1452, 1473, 1539
Fnu4HI GCNGC 7 cut(s) 189, 484, 666, 869, 872, 1303, 1306
FokI GGATG 4 cut(s) 40, 122, 948, 1148
Fsp4HI GCNGC 7 cut(s) 189, 484, 666, 869, 872, 1303, 1306
FspBI CTAG 3 cut(s) 383, 831, 1397
GlaI GCGC 4 cut(s) 151, 163, 435, 1113
GluI GCNGC 7 cut(s) 189, 484, 666, 869, 872, 1303, 1306
GsaI CCCAGC 1 cut(s) 444
GsuI CTGGAG 3 cut(s) 446, 626, 1631
HaeII RGCGCY 2 cut(s) 153, 437
HaeIII GGCC 7 cut(s) 375, 449, 617, 940, 1308, 1333, 1747
HapII CCGG 7 cut(s) 372, 445, 575, 586, 733, 877, 1280
HgaI GACGC 2 cut(s) 400, 1112
HhaI GCGC 4 cut(s) 152, 164, 436, 1114
Hin1I GRCGYC 1 cut(s) 392
Hin1II CATG 8 cut(s) 241, 328, 644, 1254, 1391, 1456, 1477, 1543
Hin6I GCGC 4 cut(s) 150, 162, 434, 1112
HinP1I GCGC 4 cut(s) 150, 162, 434, 1112
HincII GTYRAC 2 cut(s) 1324, 1378
HindII GTYRAC 2 cut(s) 1324, 1378
HinfI GANTC 8 cut(s) 108, 243, 592, 1094, 1461, 1556, 1580, 1723
HpaI GTTAAC 1 cut(s) 1324
HpaII CCGG 7 cut(s) 372, 445, 575, 586, 733, 877, 1280
HphI GGTGA 5 cut(s) 196, 349, 587, 691, 1480
Hpy166II GTNNAC 7 cut(s) 79, 340, 706, 744, 963, 1324, 1378
Hpy188I TCNGA 5 cut(s) 252, 357, 674, 1168, 1707
Hpy8I GTNNAC 7 cut(s) 79, 340, 706, 744, 963, 1324, 1378
Hpy99I CGWCG 4 cut(s) 394, 540, 557, 857
HpyAV CCTTC 4 cut(s) 430, 1012, 1205, 1368
HpyCH4III ACNGT 3 cut(s) 367, 1088, 1711
HpyCH4IV ACGT 7 cut(s) 35, 118, 145, 538, 852, 1103, 1531
HpyCH4V TGCA 9 cut(s) 191, 727, 763, 885, 1185, 1349, 1507, 1553, 1641
HpyF10VI GCNNNNNNNGC 2 cut(s) 868, 1120
HpyF3I CTNAG 6 cut(s) 354, 633, 966, 1176, 1401, 1407
HpySE526I ACGT 7 cut(s) 35, 118, 145, 538, 852, 1103, 1531
Hsp92I GRCGYC 1 cut(s) 392
Hsp92II CATG 8 cut(s) 241, 328, 644, 1254, 1391, 1456, 1477, 1543
HspAI GCGC 4 cut(s) 150, 162, 434, 1112
KflI GGGWCCC 1 cut(s) 169
KpnI GGTACC 1 cut(s) 781
KroI GCCGGC 1 cut(s) 371
KroNI GCCGGC 1 cut(s) 373
KspAI GTTAAC 1 cut(s) 1324
KspI CCGCGG 1 cut(s) 1306
Kzo9I GATC 4 cut(s) 266, 601, 1200, 1456
LmnI GCTCC 8 cut(s) 126, 441, 462, 473, 607, 879, 1021, 1064
Lsp1109I GCAGC 3 cut(s) 175, 652, 858
LweI GCATC 2 cut(s) 541, 756
MaeI CTAG 3 cut(s) 383, 831, 1397
MaeII ACGT 7 cut(s) 35, 118, 145, 538, 852, 1103, 1531
MaeIII GTNAC 3 cut(s) 275, 1077, 1476
MalI GATC 4 cut(s) 268, 603, 1202, 1458
MbiI CCGCTC 1 cut(s) 263
MboI GATC 4 cut(s) 266, 601, 1200, 1456
MflI RGATCY 2 cut(s) 601, 1200
MhlI GDGCHC 3 cut(s) 308, 470, 852
MlsI TGGCCA 1 cut(s) 940
MluCI AATT 1 cut(s) 11
MluNI TGGCCA 1 cut(s) 940
MlyI GAGTC 2 cut(s) 1470, 1574
Mox20I TGGCCA 1 cut(s) 940
MroNI GCCGGC 1 cut(s) 371
MroXI GAANNNNTTC 1 cut(s) 344
MscI TGGCCA 1 cut(s) 940
MseI TTAA 4 cut(s) 771, 837, 1323, 1671
MslI CAYNNNNRTG 1 cut(s) 236
Msp20I TGGCCA 1 cut(s) 940
MspA1I CMGCKG 2 cut(s) 871, 1305
MspCI CTTAAG 1 cut(s) 770
MspI CCGG 7 cut(s) 372, 445, 575, 586, 733, 877, 1280
MspR9I CCNGG 9 cut(s) 61, 361, 446, 575, 599, 734, 783, 977, 1743
MvaI CCWGG 6 cut(s) 61, 361, 599, 783, 977, 1743
MvnI CGCG 2 cut(s) 164, 1305
MwoI GCNNNNNNNGC 2 cut(s) 868, 1120
NaeI GCCGGC 1 cut(s) 373
NciI CCSGG 3 cut(s) 446, 575, 734
NcoI CCATGG 1 cut(s) 1539
NdeII GATC 4 cut(s) 266, 601, 1200, 1456
NgoMIV GCCGGC 1 cut(s) 371
NlaIII CATG 8 cut(s) 241, 328, 644, 1254, 1391, 1456, 1477, 1543
NlaIV GGNNCC 7 cut(s) 66, 128, 170, 171, 401, 609, 779
NmeAIII GCCGAG 1 cut(s) 297
NspI RCATGY 1 cut(s) 1477
PasI CCCWGGG 1 cut(s) 782
PciI ACATGT 1 cut(s) 1473
PdiI GCCGGC 1 cut(s) 373
PdmI GAANNNNTTC 1 cut(s) 344
PfeI GAWTC 6 cut(s) 108, 243, 592, 1094, 1556, 1723
PflMI CCANNNNNTGG 1 cut(s) 604
PkrI GCNGC 7 cut(s) 190, 485, 667, 870, 873, 1304, 1307
Ple19I CGATCG 1 cut(s) 269
PleI GAGTC 2 cut(s) 1469, 1574
PmaCI CACGTG 2 cut(s) 119, 146
PmlI CACGTG 2 cut(s) 119, 146
PpsI GAGTC 2 cut(s) 1469, 1574
Ppu21I YACGTR 3 cut(s) 119, 146, 1532
PpuMI RGGWCCY 1 cut(s) 169
PscI ACATGT 1 cut(s) 1473
PshAI GACNNNNGTC 2 cut(s) 84, 1383
Psp1406I AACGTT 1 cut(s) 35
Psp5II RGGWCCY 1 cut(s) 169
Psp6I CCWGG 6 cut(s) 59, 359, 597, 781, 975, 1741
PspCI CACGTG 2 cut(s) 119, 146
PspFI CCCAGC 1 cut(s) 440
PspGI CCWGG 6 cut(s) 59, 359, 597, 781, 975, 1741
PspN4I GGNNCC 7 cut(s) 66, 128, 170, 171, 401, 609, 779
PspPI GGNCC 7 cut(s) 65, 79, 169, 447, 615, 1332, 1745
PspPPI RGGWCCY 1 cut(s) 169
PstNI CAGNNNCTG 2 cut(s) 604, 1559
PsuI RGATCY 2 cut(s) 601, 1200
PvuI CGATCG 1 cut(s) 269
RsaI GTAC 3 cut(s) 713, 779, 1496
RsaNI GTAC 3 cut(s) 712, 778, 1495
RseI CAYNNNNRTG 1 cut(s) 236
SacII CCGCGG 1 cut(s) 1306
SaqAI TTAA 4 cut(s) 771, 837, 1323, 1671
SatI GCNGC 7 cut(s) 189, 484, 666, 869, 872, 1303, 1306
Sau3AI GATC 4 cut(s) 266, 601, 1200, 1456
Sau96I GGNCC 7 cut(s) 65, 79, 169, 447, 615, 1332, 1745
ScaI AGTACT 1 cut(s) 1496
SchI GAGTC 2 cut(s) 1470, 1574
ScrFI CCNGG 9 cut(s) 61, 361, 446, 575, 599, 734, 783, 977, 1743
SduI GDGCHC 3 cut(s) 308, 470, 852
SfaNI GCATC 2 cut(s) 541, 756
SfcI CTRYAG 1 cut(s) 487
Sfr303I CCGCGG 1 cut(s) 1306
SgrBI CCGCGG 1 cut(s) 1306
SinI GGWCC 3 cut(s) 65, 79, 169
SmiMI CAYNNNNRTG 1 cut(s) 236
SmlI CTYRAG 2 cut(s) 687, 770
SmoI CTYRAG 2 cut(s) 687, 770
Sse9I AATT 1 cut(s) 11
SsiI CCGC 6 cut(s) 261, 484, 869, 1254, 1303, 1305
SspMI CTAG 3 cut(s) 383, 831, 1397
StyD4I CCNGG 9 cut(s) 59, 359, 444, 573, 597, 732, 781, 975, 1741
StyI CCWWGG 2 cut(s) 1317, 1539
TaaI ACNGT 3 cut(s) 367, 1088, 1711
TaiI ACGT 7 cut(s) 38, 121, 148, 541, 855, 1106, 1534
TaqI TCGA 4 cut(s) 265, 535, 1459, 1583
TaqII GACCGA 1 cut(s) 860
TasI AATT 1 cut(s) 11
TatI WGTACW 2 cut(s) 711, 1494
TauI GCSGC 4 cut(s) 486, 871, 1305, 1308
TfiI GAWTC 6 cut(s) 108, 243, 592, 1094, 1556, 1723
Tru1I TTAA 4 cut(s) 771, 837, 1323, 1671
Tru9I TTAA 4 cut(s) 771, 837, 1323, 1671
TscAI CASTG 3 cut(s) 81, 470, 1187
TseI GCWGC 3 cut(s) 188, 665, 871
TspDTI ATGAA 4 cut(s) 17, 220, 313, 1736
TspGWI ACGGA 3 cut(s) 280, 524, 541
TspRI CASTG 3 cut(s) 81, 470, 1187
Van91I CCANNNNNTGG 1 cut(s) 604
Vha464I CTTAAG 1 cut(s) 770
VpaK11BI GGWCC 3 cut(s) 65, 79, 169
XagI CCTNNNNNAGG 1 cut(s) 1400
XceI RCATGY 1 cut(s) 1477
XcmI CCANNNNNNNNNTGG 1 cut(s) 918
XmnI GAANNNNTTC 1 cut(s) 344
XspI CTAG 3 cut(s) 383, 831, 1397
ZrmI AGTACT 1 cut(s) 1496
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.