MD03G1069900.v1.1

Putative lipopolysaccharide-modifying enzyme.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0012971
Physical Location & Seq
Reverse (-)
5714846 .. 5717878
3033 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1069900.v1.1.491

Sequence Viewer

Length: 1476 bp
ATGGCGGCTCCGAGATCCGCCGCGCCCTCTCACATCCTCCCATCCGTCATCGCCCTCTCCCTTCTCTCTCTCGGCTTCGTCATCTACAAGGTGGACGACTTCGCCACTCAGACCAAGACACTGGCCGGCCACAACCTCCAGCCGACGCCTTGGCACTTCTTCCCGCCAAAAACTTTCACCGACGAGACCCTCCACGACCGAGCCTACAAGCTTATCCACTGCTCATATCTCGCCTGCCGCTACAAAAGCAACGAAGTCCCTGAACGACGCCGTCCTCCGTCGTTCCGTGCGAAAGCCCCGAAATGCCCCGAGTTCTTCCTTTGGATCCACCACGATCTGGAGCCCTGGGCCCGGACCCGGATCTCCGCTGCCCATTTGGAGACCGCCAAGCAACACGCAGCGTTTCGCGTGGTGATTGTTGACGGGAGGCTGTATGTGGATTTGTTCTGGGCTTGCGTGCAGAGCCGCGCCATGTTCACCATTTGGGGTTTCCTGCAGCTCCTTGCCAGGTATCCGGGTCGGGTTCCGGATGTGGATATCATGTTTGATTGCATGGATAAGCCCATAATTAACCGGACCGAGCACGAATCGATGCCTTTGCCGCTTTTCCGGTACTGTACGGACGGTGATCATTTTGATATCCCATTTCCTGATTGGTCCTTCTGGGGTTGGCCAGAGCTTAACATTCATCCCTGGGAAGAGCAGTTCGGGGAAATCAAGCGGGGTTCTCAGGAAAGAAGTTGGAAAAAGAAGGAGCCTTTCGCATATTGGAAAGGAAACCCAGATGTTAGTTCCCCTATTCGTACGGAGTTACTTAACTGCAATGACACGAAGATGTGGAGAGCACAGATTATGCGTCAGGATTGGGAAGCGGAAGCAAGAGCTGGTTATGAGCATTCCAAACTATCTACGCAGTGTAATCATCAGTACAAAATCTATGCAGAAGGCTATGCTTGGTCTGTCAGCCTAAAATATATTGTATCATGTGGTTCTCTTACACTCATAATAACCCCGCAATATGAGGATTTCTTCAGCCGCGGTCTCATTCCTAAGATTAATTATTGGCCCATCTCCCCTAACGCTATATGCCCGTCTATAAAGTCTGCTGTTGACTGGGCTCAGGGGCACCAATCTGAGGCTAAGGCAATGGGACAAAGAGGGCAGGATTTCATGGAAAGCCTAAGCATGGATCGGGTCTATGATTACATGTTTCACCTCATCATGGAGTACTCAAAGCTGCTGGACTTCGAGCCAGACATTCCAGCTTCTGCTATGGAAGTATGTACAGAATCCCTGCTTTGTCTTGCTGACCCGAAACAGAGAGAGTGGCTTAAAAGGTCTACCGCGTACCCTTCTCCTAGCCCGCCGTGCACTCTCCCGTCGGCTGATAGTAATCTCATCAAGAGATGGAAGCGGAAAAAACAAGAAACGATGGACGCTGTGGAGGACATGAATCCGAAGGGACGGAGACGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00514 map00514
Pfam Domains
Protein Families
Glyco_transf_90

Protein Analysis

492

Amino Acids

57.09

Weight (kDa)

8.13

Isoelectric Point (pI)

53.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_90 PF05686 99 - 484 3.9e-148 Glycosyl transferase family 90
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012971)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G07220
fragaria_vesca FvH4_3g38610
malus_domestica MD03G1069900.v1.1 MD11G1073700.v1.1 MD17G1174000.v1.1
prunus_persica Prupe.6G057000_v2.0.a1
pyrus_communis pycom03g05560
rosa_chinensis RchiOBHm_Chr5g0069671
rosa_laevigata RLG00000036083
rosa_multiflora Rmu_sc0007688.1_g000001 Rmu_sc0021095.1_g000001
rosa_roxburghii Rroxscaffold_1G00011410
rosa_rugosa Rorug05G0399200
rosa_samantha Rh5AG455900 Rh5BG474900 Rh5CG498400 Rh5DG486400
rosa_wichuraiana Rw5G042540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1125
AccB7I CCANNNNNTGG 1 cut(s) 337
AccI GTMKAC 1 cut(s) 1340
AccII CGCG 5 cut(s) 23, 408, 468, 1038, 1346
AccIII TCCGGA 1 cut(s) 526
AclWI GGATC 5 cut(s) 9, 319, 332, 368, 1197
AcoI YGGCCR 3 cut(s) 123, 127, 671
AcuI CTGAAG 1 cut(s) 1015
AcyI GRCGYC 2 cut(s) 146, 268
AfaI GTAC 7 cut(s) 614, 619, 805, 929, 1229, 1285, 1349
AfiI CCNNNNNNNGG 6 cut(s) 337, 351, 357, 1135, 1186, 1222
AflIII ACRYGT 1 cut(s) 1206
AjnI CCWGG 3 cut(s) 344, 506, 692
AloI GAACNNNNNNTCC 2 cut(s) 689, 721
AluBI AGCT 6 cut(s) 211, 499, 679, 884, 1237, 1265
AluI AGCT 6 cut(s) 211, 499, 679, 884, 1237, 1265
Alw21I GWGCWC 3 cut(s) 585, 847, 1373
Alw26I GTCTC 4 cut(s) 179, 374, 1046, 1462
Alw44I GTGCAC 1 cut(s) 1369
AlwI GGATC 5 cut(s) 9, 319, 332, 368, 1197
AlwNI CAGNNNCTG 1 cut(s) 1268
Ama87I CYCGRG 1 cut(s) 308
Aor13HI TCCGGA 1 cut(s) 526
AoxI GGCC 5 cut(s) 123, 127, 348, 671, 1064
ApaI GGGCCC 1 cut(s) 352
ApaLI GTGCAC 1 cut(s) 1369
ApeKI GCWGC 4 cut(s) 368, 398, 496, 1237
AseI ATTAAT 1 cut(s) 1056
AspLEI GCGC 2 cut(s) 25, 470
AspS9I GGNCC 6 cut(s) 348, 349, 354, 576, 657, 1065
AsuC2I CCSGG 3 cut(s) 352, 358, 516
AsuHPI GGTGA 5 cut(s) 169, 424, 469, 638, 1205
AvaI CYCGRG 1 cut(s) 308
AvaII GGWCC 3 cut(s) 354, 576, 657
BaeGI GKGCMC 3 cut(s) 352, 1128, 1373
BalI TGGCCA 1 cut(s) 673
BamHI GGATCC 1 cut(s) 324
BanI GGYRCC 1 cut(s) 1125
BanII GRGCYC 3 cut(s) 345, 352, 1120
Bbv12I GWGCWC 3 cut(s) 585, 847, 1373
BbvI GCAGC 4 cut(s) 355, 410, 508, 1224
BccI CCATC 4 cut(s) 49, 1076, 1401, 1426
BceAI ACGGC 2 cut(s) 255, 1351
BcgI CGANNNNNNTGC 2 cut(s) 580, 614
BciT130I CCWGG 3 cut(s) 346, 508, 694
BciVI GTATCC 1 cut(s) 522
BclI TGATCA 1 cut(s) 628
BcnI CCSGG 3 cut(s) 352, 358, 516
BcoDI GTCTC 4 cut(s) 179, 374, 1046, 1462
BfaI CTAG 1 cut(s) 1359
BfmI CTRYAG 1 cut(s) 494
BfuI GTATCC 1 cut(s) 522
BmcAI AGTACT 1 cut(s) 1229
Bme1390I CCNGG 6 cut(s) 346, 352, 358, 508, 516, 694
Bme18I GGWCC 3 cut(s) 354, 576, 657
BmeT110I CYCGRG 1 cut(s) 308
BmgT120I GGNCC 6 cut(s) 348, 349, 354, 576, 657, 1065
BmiI GGNNCC 8 cut(s) 9, 326, 342, 350, 356, 525, 756, 1127
BmrFI CCNGG 6 cut(s) 346, 352, 358, 508, 516, 694
BmrI ACTGGG 1 cut(s) 1123
BmsI GCATC 1 cut(s) 582
BmuI ACTGGG 1 cut(s) 1123
BpmI CTGGAG 2 cut(s) 122, 359
Bpu10I CCTNAGC 3 cut(s) 1119, 1140, 1181
BpuMI CCSGG 3 cut(s) 352, 358, 516
Bsa29I ATCGAT 1 cut(s) 590
BsaBI GATNNNNATC 1 cut(s) 1392
BsaHI GRCGYC 2 cut(s) 146, 268
BsaI GGTCTC 3 cut(s) 179, 374, 1046
BsaJI CCNNGG 6 cut(s) 149, 344, 345, 692, 693, 1036
BsaWI WCCGGW 3 cut(s) 526, 573, 609
Bsc4I CCNNNNNNNGG 6 cut(s) 337, 351, 357, 1135, 1186, 1222
Bse118I RCCGGY 1 cut(s) 125
Bse1I ACTGG 2 cut(s) 126, 1118
Bse3DI GCAATG 2 cut(s) 829, 1152
Bse8I GATNNNNATC 1 cut(s) 1392
BseAI TCCGGA 1 cut(s) 526
BseBI CCWGG 3 cut(s) 346, 508, 694
BseCI ATCGAT 1 cut(s) 590
BseDI CCNNGG 6 cut(s) 149, 344, 345, 692, 693, 1036
BseGI GGATG 4 cut(s) 33, 41, 535, 688
BseJI GATNNNNATC 1 cut(s) 1392
BseLI CCNNNNNNNGG 6 cut(s) 337, 351, 357, 1135, 1186, 1222
BseMI GCAATG 2 cut(s) 829, 1152
BseMII CTCAG 4 cut(s) 122, 743, 1125, 1133
BseNI ACTGG 2 cut(s) 126, 1118
BseSI GKGCMC 3 cut(s) 352, 1128, 1373
BseXI GCAGC 4 cut(s) 355, 410, 508, 1224
BsgI GTGCAG 1 cut(s) 479
Bsh1236I CGCG 5 cut(s) 23, 408, 468, 1038, 1346
Bsh1285I CGRYCG 1 cut(s) 199
BshFI GGCC 5 cut(s) 125, 129, 350, 673, 1066
BshNI GGYRCC 1 cut(s) 1125
BshVI ATCGAT 1 cut(s) 590
BsiEI CGRYCG 1 cut(s) 199
BsiHKAI GWGCWC 3 cut(s) 585, 847, 1373
BsiHKCI CYCGRG 1 cut(s) 308
BsiSI CCGG 7 cut(s) 126, 352, 358, 515, 527, 574, 610
BsiWI CGTACG 1 cut(s) 803
BslFI GGGAC 2 cut(s) 242, 1164
BslI CCNNNNNNNGG 6 cut(s) 337, 351, 357, 1135, 1186, 1222
BsmAI GTCTC 4 cut(s) 179, 374, 1046, 1462
BsmBI CGTCTC 1 cut(s) 1462
BsmFI GGGAC 2 cut(s) 242, 1164
BsmI GAATGC 1 cut(s) 895
BsnI GGCC 5 cut(s) 125, 129, 350, 673, 1066
Bso31I GGTCTC 3 cut(s) 179, 374, 1046
BsoBI CYCGRG 1 cut(s) 308
Bsp120I GGGCCC 1 cut(s) 348
Bsp1286I GDGCHC 7 cut(s) 345, 352, 585, 847, 1120, 1128, 1373
Bsp13I TCCGGA 1 cut(s) 526
Bsp1407I TGTACA 1 cut(s) 1283
Bsp143I GATC 6 cut(s) 14, 324, 334, 360, 628, 1189
BspANI GGCC 5 cut(s) 125, 129, 350, 673, 1066
BspCNI CTCAG 4 cut(s) 121, 742, 1126, 1132
BspDI ATCGAT 1 cut(s) 590
BspEI TCCGGA 1 cut(s) 526
BspFNI CGCG 5 cut(s) 23, 408, 468, 1038, 1346
BspLI GGNNCC 8 cut(s) 9, 326, 342, 350, 356, 525, 756, 1127
BspMAI CTGCAG 1 cut(s) 498
BspPI GGATC 5 cut(s) 9, 319, 332, 368, 1197
BspQI GCTCTTC 1 cut(s) 693
BspT107I GGYRCC 1 cut(s) 1125
BspTNI GGTCTC 3 cut(s) 179, 374, 1046
BsrDI GCAATG 2 cut(s) 829, 1152
BsrFI RCCGGY 1 cut(s) 125
BsrGI TGTACA 1 cut(s) 1283
BsrI ACTGG 2 cut(s) 126, 1118
BssAI RCCGGY 1 cut(s) 125
BssECI CCNNGG 6 cut(s) 149, 344, 345, 692, 693, 1036
BssMI GATC 6 cut(s) 14, 324, 334, 360, 628, 1189
BssNI GRCGYC 2 cut(s) 146, 268
BssT1I CCWWGG 1 cut(s) 149
Bst2UI CCWGG 3 cut(s) 346, 508, 694
Bst4CI ACNGT 2 cut(s) 617, 626
Bst6I CTCTTC 1 cut(s) 693
BstACI GRCGYC 2 cut(s) 146, 268
BstAUI TGTACA 1 cut(s) 1283
BstC8I GCNNGC 5 cut(s) 127, 235, 454, 458, 1364
BstDEI CTNAG 7 cut(s) 108, 729, 1050, 1119, 1134, 1140, 1181
BstDSI CCRYGG 1 cut(s) 1036
BstF5I GGATG 4 cut(s) 33, 41, 535, 688
BstFNI CGCG 5 cut(s) 23, 408, 468, 1038, 1346
BstHHI GCGC 2 cut(s) 25, 470
BstKTI GATC 6 cut(s) 17, 327, 337, 363, 631, 1192
BstMAI GTCTC 4 cut(s) 179, 374, 1046, 1462
BstMBI GATC 6 cut(s) 14, 324, 334, 360, 628, 1189
BstMCI CGRYCG 1 cut(s) 199
BstMWI GCNNNNNNNGC 4 cut(s) 246, 462, 601, 1368
BstNI CCWGG 3 cut(s) 346, 508, 694
BstNSI RCATGY 1 cut(s) 1210
BstSCI CCNGG 6 cut(s) 344, 350, 356, 506, 514, 692
BstSFI CTRYAG 1 cut(s) 494
BstSLI GKGCMC 3 cut(s) 352, 1128, 1373
BstUI CGCG 5 cut(s) 23, 408, 468, 1038, 1346
BstV1I GCAGC 4 cut(s) 355, 410, 508, 1224
BstX2I RGATCY 3 cut(s) 14, 324, 360
BstXI CCANNNNNNTGG 1 cut(s) 121
BstYI RGATCY 3 cut(s) 14, 324, 360
Bsu15I ATCGAT 1 cut(s) 590
BsuI GTATCC 1 cut(s) 522
BsuRI GGCC 5 cut(s) 125, 129, 350, 673, 1066
BsuTUI ATCGAT 1 cut(s) 590
BtgI CCRYGG 1 cut(s) 1036
BtgZI GCGATG 1 cut(s) 34
BtsCI GGATG 4 cut(s) 33, 41, 535, 688
BtsI GCAGTG 2 cut(s) 217, 920
BtsIMutI CAGTG 3 cut(s) 119, 217, 920
Cac8I GCNNGC 5 cut(s) 127, 235, 454, 458, 1364
CaiI CAGNNNCTG 1 cut(s) 1268
CfoI GCGC 2 cut(s) 25, 470
Cfr10I RCCGGY 1 cut(s) 125
Cfr13I GGNCC 6 cut(s) 348, 349, 354, 576, 657, 1065
Cfr42I CCGCGG 1 cut(s) 1039
ClaI ATCGAT 1 cut(s) 590
CpoI CGGWCCG 1 cut(s) 576
CseI GACGC 4 cut(s) 154, 276, 845, 1445
Csp6I GTAC 7 cut(s) 613, 618, 804, 928, 1228, 1284, 1348
CspI CGGWCCG 1 cut(s) 576
CviAII CATG 9 cut(s) 472, 541, 553, 984, 1171, 1186, 1207, 1222, 1450
CviQI GTAC 7 cut(s) 613, 618, 804, 928, 1228, 1284, 1348
DdeI CTNAG 7 cut(s) 108, 729, 1050, 1119, 1134, 1140, 1181
DpnI GATC 6 cut(s) 16, 326, 336, 362, 630, 1191
DpnII GATC 6 cut(s) 14, 324, 334, 360, 628, 1189
EaeI YGGCCR 3 cut(s) 123, 127, 671
Eam1104I CTCTTC 1 cut(s) 693
EarI CTCTTC 1 cut(s) 693
EciI GGCGGA 1 cut(s) 7
Eco130I CCWWGG 1 cut(s) 149
Eco24I GRGCYC 3 cut(s) 345, 352, 1120
Eco31I GGTCTC 3 cut(s) 179, 374, 1046
Eco32I GATATC 2 cut(s) 538, 640
Eco47I GGWCC 3 cut(s) 354, 576, 657
Eco57I CTGAAG 1 cut(s) 1015
Eco88I CYCGRG 1 cut(s) 308
EcoRII CCWGG 3 cut(s) 344, 506, 692
EcoRV GATATC 2 cut(s) 538, 640
EcoT14I CCWWGG 1 cut(s) 149
EcoT38I GRGCYC 3 cut(s) 345, 352, 1120
ErhI CCWWGG 1 cut(s) 149
Esp3I CGTCTC 1 cut(s) 1462
FaeI CATG 9 cut(s) 475, 544, 556, 987, 1174, 1189, 1210, 1225, 1453
FaqI GGGAC 2 cut(s) 242, 1164
FatI CATG 9 cut(s) 471, 540, 552, 983, 1170, 1185, 1206, 1221, 1449
FauI CCCGC 4 cut(s) 171, 714, 1020, 1371
FbaI TGATCA 1 cut(s) 628
FblI GTMKAC 1 cut(s) 1340
FokI GGATG 4 cut(s) 20, 28, 542, 675
FriOI GRGCYC 3 cut(s) 345, 352, 1120
FseI GGCCGGCC 1 cut(s) 129
FspBI CTAG 1 cut(s) 1359
GlaI GCGC 2 cut(s) 24, 469
GsuI CTGGAG 2 cut(s) 122, 359
HaeIII GGCC 5 cut(s) 125, 129, 350, 673, 1066
HapII CCGG 7 cut(s) 126, 352, 358, 515, 527, 574, 610
HgaI GACGC 4 cut(s) 154, 276, 845, 1445
HhaI GCGC 2 cut(s) 25, 470
Hin1I GRCGYC 2 cut(s) 146, 268
Hin1II CATG 9 cut(s) 475, 544, 556, 987, 1174, 1189, 1210, 1225, 1453
Hin6I GCGC 2 cut(s) 23, 468
HinP1I GCGC 2 cut(s) 23, 468
HincII GTYRAC 2 cut(s) 421, 1111
HindII GTYRAC 2 cut(s) 421, 1111
HindIII AAGCTT 1 cut(s) 209
HinfI GANTC 3 cut(s) 587, 1289, 1453
HpaII CCGG 7 cut(s) 126, 352, 358, 515, 527, 574, 610
HphI GGTGA 5 cut(s) 169, 424, 469, 638, 1205
Hpy166II GTNNAC 6 cut(s) 94, 421, 477, 1111, 1341, 1371
Hpy188I TCNGA 4 cut(s) 12, 111, 1135, 1458
Hpy188III TCNNGA 6 cut(s) 338, 527, 650, 731, 860, 1402
Hpy8I GTNNAC 6 cut(s) 94, 421, 477, 1111, 1341, 1371
Hpy99I CGWCG 5 cut(s) 148, 185, 270, 283, 1384
HpyAV CCTTC 6 cut(s) 71, 670, 745, 938, 1362, 1453
HpyCH4III ACNGT 2 cut(s) 617, 626
HpyCH4V TGCA 6 cut(s) 460, 496, 552, 822, 941, 1371
HpyF10VI GCNNNNNNNGC 4 cut(s) 246, 462, 601, 1368
HpyF3I CTNAG 7 cut(s) 108, 729, 1050, 1119, 1134, 1140, 1181
Hsp92I GRCGYC 2 cut(s) 146, 268
Hsp92II CATG 9 cut(s) 475, 544, 556, 987, 1174, 1189, 1210, 1225, 1453
HspAI GCGC 2 cut(s) 23, 468
Kpn2I TCCGGA 1 cut(s) 526
KroI GCCGGC 1 cut(s) 125
KroNI GCCGGC 1 cut(s) 127
Ksp22I TGATCA 1 cut(s) 628
KspI CCGCGG 1 cut(s) 1039
Kzo9I GATC 6 cut(s) 14, 324, 334, 360, 628, 1189
LguI GCTCTTC 1 cut(s) 693
LmnI GCTCC 4 cut(s) 13, 340, 504, 754
Lsp1109I GCAGC 4 cut(s) 355, 410, 508, 1224
LweI GCATC 1 cut(s) 582
MaeI CTAG 1 cut(s) 1359
MaeIII GTNAC 1 cut(s) 810
MalI GATC 6 cut(s) 16, 326, 336, 362, 630, 1191
MboI GATC 6 cut(s) 14, 324, 334, 360, 628, 1189
MboII GAAGA 5 cut(s) 151, 307, 710, 844, 1021
MflI RGATCY 3 cut(s) 14, 324, 360
MhlI GDGCHC 7 cut(s) 345, 352, 585, 847, 1120, 1128, 1373
MlsI TGGCCA 1 cut(s) 673
MluCI AATT 2 cut(s) 567, 1057
MluNI TGGCCA 1 cut(s) 673
MmeI TCCRAC 1 cut(s) 722
Mox20I TGGCCA 1 cut(s) 673
MroI TCCGGA 1 cut(s) 526
MroNI GCCGGC 1 cut(s) 125
MscI TGGCCA 1 cut(s) 673
MseI TTAA 5 cut(s) 570, 681, 816, 1056, 1332
MslI CAYNNNNRTG 1 cut(s) 833
Msp20I TGGCCA 1 cut(s) 673
MspA1I CMGCKG 2 cut(s) 368, 1038
MspI CCGG 7 cut(s) 126, 352, 358, 515, 527, 574, 610
MspR9I CCNGG 6 cut(s) 346, 352, 358, 508, 516, 694
Mva1269I GAATGC 1 cut(s) 895
MvaI CCWGG 3 cut(s) 346, 508, 694
MvnI CGCG 5 cut(s) 23, 408, 468, 1038, 1346
MwoI GCNNNNNNNGC 4 cut(s) 246, 462, 601, 1368
NaeI GCCGGC 1 cut(s) 127
NciI CCSGG 3 cut(s) 352, 358, 516
NdeII GATC 6 cut(s) 14, 324, 334, 360, 628, 1189
NgoMIV GCCGGC 1 cut(s) 125
NlaIII CATG 9 cut(s) 475, 544, 556, 987, 1174, 1189, 1210, 1225, 1453
NlaIV GGNNCC 8 cut(s) 9, 326, 342, 350, 356, 525, 756, 1127
NmeAIII GCCGAG 1 cut(s) 51
NspI RCATGY 1 cut(s) 1210
PasI CCCWGGG 2 cut(s) 345, 693
PciI ACATGT 1 cut(s) 1206
PciSI GCTCTTC 1 cut(s) 693
PcsI WCGNNNNNNNCGW 1 cut(s) 287
PctI GAATGC 1 cut(s) 895
PdiI GCCGGC 1 cut(s) 127
PfeI GAWTC 3 cut(s) 587, 1289, 1453
Pfl23II CGTACG 1 cut(s) 803
PflFI GACNNNGTC 1 cut(s) 270
PflMI CCANNNNNTGG 1 cut(s) 337
PscI ACATGT 1 cut(s) 1206
PshBI ATTAAT 1 cut(s) 1056
Psp6I CCWGG 3 cut(s) 344, 506, 692
PspGI CCWGG 3 cut(s) 344, 506, 692
PspLI CGTACG 1 cut(s) 803
PspN4I GGNNCC 8 cut(s) 9, 326, 342, 350, 356, 525, 756, 1127
PspOMI GGGCCC 1 cut(s) 348
PspPI GGNCC 6 cut(s) 348, 349, 354, 576, 657, 1065
PstI CTGCAG 1 cut(s) 498
PstNI CAGNNNCTG 1 cut(s) 1268
PsuI RGATCY 3 cut(s) 14, 324, 360
PsyI GACNNNGTC 1 cut(s) 270
RigI GGCCGGCC 1 cut(s) 129
RsaI GTAC 7 cut(s) 614, 619, 805, 929, 1229, 1285, 1349
RsaNI GTAC 7 cut(s) 613, 618, 804, 928, 1228, 1284, 1348
RseI CAYNNNNRTG 1 cut(s) 833
Rsr2I CGGWCCG 1 cut(s) 576
RsrII CGGWCCG 1 cut(s) 576
SacII CCGCGG 1 cut(s) 1039
SapI GCTCTTC 1 cut(s) 693
SaqAI TTAA 5 cut(s) 570, 681, 816, 1056, 1332
Sau3AI GATC 6 cut(s) 14, 324, 334, 360, 628, 1189
Sau96I GGNCC 6 cut(s) 348, 349, 354, 576, 657, 1065
ScaI AGTACT 1 cut(s) 1229
ScrFI CCNGG 6 cut(s) 346, 352, 358, 508, 516, 694
SduI GDGCHC 7 cut(s) 345, 352, 585, 847, 1120, 1128, 1373
SfaNI GCATC 1 cut(s) 582
SfcI CTRYAG 1 cut(s) 494
Sfr303I CCGCGG 1 cut(s) 1039
SgrBI CCGCGG 1 cut(s) 1039
SinI GGWCC 3 cut(s) 354, 576, 657
SmiMI CAYNNNNRTG 1 cut(s) 833
Sse9I AATT 2 cut(s) 567, 1057
SspMI CTAG 1 cut(s) 1359
StyD4I CCNGG 6 cut(s) 344, 350, 356, 506, 514, 692
StyI CCWWGG 1 cut(s) 149
TaaI ACNGT 2 cut(s) 617, 626
TaqI TCGA 2 cut(s) 590, 1248
TaqII GACCGA 2 cut(s) 213, 593
TasI AATT 2 cut(s) 567, 1057
TatI WGTACW 3 cut(s) 927, 1227, 1283
TauI GCSGC 6 cut(s) 8, 23, 240, 468, 604, 1038
TfiI GAWTC 3 cut(s) 587, 1289, 1453
Tru1I TTAA 5 cut(s) 570, 681, 816, 1056, 1332
Tru9I TTAA 5 cut(s) 570, 681, 816, 1056, 1332
TscAI CASTG 3 cut(s) 126, 224, 920
TseI GCWGC 4 cut(s) 368, 398, 496, 1237
TspDTI ATGAA 3 cut(s) 677, 1159, 1466
TspGWI ACGGA 5 cut(s) 34, 267, 275, 635, 821
TspRI CASTG 3 cut(s) 126, 224, 920
Tth111I GACNNNGTC 1 cut(s) 270
Van91I CCANNNNNTGG 1 cut(s) 337
VneI GTGCAC 1 cut(s) 1369
VpaK11BI GGWCC 3 cut(s) 354, 576, 657
VspI ATTAAT 1 cut(s) 1056
XceI RCATGY 1 cut(s) 1210
XcmI CCANNNNNNNNNTGG 1 cut(s) 651
XmiI GTMKAC 1 cut(s) 1340
XspI CTAG 1 cut(s) 1359
ZrmI AGTACT 1 cut(s) 1229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.