FvH4_3g43580

ETHYLENE INSENSITIVE 3-like 3

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
36320589 .. 36323763
3175 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g43580.t2

Sequence Viewer

Length: 1656 bp
ATGTGGAAGGATCGAATCAAACTCAAAAGGATCAAGGAAAAGCAGAAGCTTGAGGCCCAAATGGCTGCGGAAAAGCAGAAGCCCAAGCAGTCATCTGATCAGGCTCGAAGGAAGAAAATGTCGAGAGCACAAGATGGGATTCTAAAGTATATGTTGAAGTTGATGGAAGTGTGCAAAGCTCGTGGATTTGTGTATGGTATAATTCCTGAGAAGGGCAAGCCAGTAAGCGGTGCTTCTGATAACATCAGAGCTTGGTGGAAAGAAAAAGTGAAGTTTGATAAGAATGGCCCTGCAGCCATAGGCAAGTATGAAGCGGAGATTCTTGCCATGACTGATGCAGACACTAACCGAAATGGTAATTCCCAGAGCATCCTCCAAGATCTACAAGATGCAACTCTTGGTTCTCTACTGTCTTCGTTGATGCAACATTGCGACCCCCCTCAAAGGAAGTATCCATTAGAAAAGGGAATTCCTCCCCCTTGGTGGCCAACAGGGAATGAAGATTGGTGGGTGAAATTAGGGATACCCCATGGTCAGAGTCCTCCTTATAAGAAGCCACATGACTTAAAGAAGATGTGGAAAGTTGGGGTGTTAACAGCTGTGATAAAGCACATGTCCCCTGATATTGCAAAGATAAGGCGGCATGTCCGCCAGTCAAAATGCTTACAGGATAAGATGACAGCAAAGGAGAGTGCAATTTGGTTGGGGGTTCTAAGCCGAGAAGAAGCCCTCATCCGGCAGCCCAGTAGTGATAATGGGACATCTGGCATAACTGAGATGCTATGTCGTGGCCGTGGTGAAAAGCATGCTACTGCTAGTGGTAATAGTGATTATGATGTTGATGGCACTGATAAGGAGTTAATCGATGCCGGATCTGTTTCATCCAAAGATGACAGGAGGACTGAGCTGATAGATGTAGAGCCATCTAGTAATCTACGCAATGGTACTACGACTAATCGTGTCCAAGGTAAAGAGAAAGGTGAAAAGCGAACGAAGAGAAAAAGGTCTCCTGTAAGACCAAGCTCTGATGATCAACTTCCTGCACCAATTGTGAGTGAGCATATGCATGTTGAACCAATAAATGCTTTGCTTGATATAAACCACACTGATGCACAGATGATTGGATTTCCAATTCATGAAGATCATCAGGAAAATGTTTCAGTCACAACTTTACGGCCACAAGTGCATGATCTTGGTGTCCAAGCATTACCAGCGTCCGGGTTTAACTACTATGCTGATGTACCTGATGATGGTGCACTTGCAACGACACAGAGCATGCATGTGGGTGGAACACCCATGCTTTATTATGGGGTGCAAAGTGCTGAGATGCATCATGGAAATATGTTTGACCTTTATAATCCATCTGCAGAATATGTGCCCGGTCATGAGAGGCAGCAGTCTCAGATTGTGATGAATGAACCTCAAATTGGACCAGCAGATGGAGTCCCTATACAAACAGTTAGAAATGGAAATGAGATTACTGGAGGAGATTTACCCTTCTATAAGGACCCATTTCTGAGTGAGCAAGACAGAATGGTCGATCCTAACTTTGATCTTGGGGTAATATTCAACAGCCCATTCCGACCTGACCTTGGATTTGAGGGCACTGCTTCATTCGATGATGAACTGGATGTGATGTCATACTTTGCAGCATAA

Protein Analysis

552

Amino Acids

61.59

Weight (kDa)

6.62

Isoelectric Point (pI)

53.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EIN3_DNA-bd PF04873 37 - 284 1.2e-128 Ethylene insensitive 3, DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 549, 1356
AasI GACNNNNNNGTC 1 cut(s) 1535
AccB7I CCANNNNNTGG 1 cut(s) 1439
AciI CCGC 5 cut(s) 68, 228, 314, 640, 649
AclWI GGATC 4 cut(s) 18, 38, 880, 1535
AcoI YGGCCR 3 cut(s) 485, 790, 1175
AcsI RAATTY 1 cut(s) 468
AfaI GTAC 2 cut(s) 946, 1242
AflIII ACRYGT 1 cut(s) 612
AgsI TTSAA 3 cut(s) 157, 1073, 1570
AjuI GAANNNNNNNTTGG 2 cut(s) 1410, 1442
AluBI AGCT 6 cut(s) 49, 179, 251, 599, 907, 1023
AluI AGCT 6 cut(s) 49, 179, 251, 599, 907, 1023
Alw21I GWGCWC 2 cut(s) 130, 1258
Alw26I GTCTC 2 cut(s) 1011, 1404
Alw44I GTGCAC 1 cut(s) 1254
AlwI GGATC 4 cut(s) 18, 38, 880, 1535
AoxI GGCC 5 cut(s) 54, 286, 485, 790, 1175
ApaLI GTGCAC 1 cut(s) 1254
ApeKI GCWGC 5 cut(s) 65, 293, 739, 1393, 1649
ApoI RAATTY 1 cut(s) 468
ArsI GACNNNNNNTTYG 2 cut(s) 1580, 1612
AspS9I GGNCC 4 cut(s) 55, 287, 1430, 1507
AsuC2I CCSGG 2 cut(s) 1219, 1380
AsuHPI GGTGA 3 cut(s) 523, 809, 992
AvaII GGWCC 2 cut(s) 1430, 1507
BaeGI GKGCMC 3 cut(s) 1258, 1380, 1607
BalI TGGCCA 1 cut(s) 487
BauI CACGAG 1 cut(s) 180
BbsI GAAGAC 1 cut(s) 405
Bbv12I GWGCWC 2 cut(s) 130, 1258
BbvI GCAGC 4 cut(s) 52, 305, 751, 1405
BccI CCATC 7 cut(s) 128, 157, 836, 931, 1244, 1369, 1433
BceAI ACGGC 2 cut(s) 777, 1190
BciVI GTATCC 2 cut(s) 462, 516
BclI TGATCA 2 cut(s) 97, 1030
BcnI CCSGG 2 cut(s) 1219, 1380
BcoDI GTCTC 2 cut(s) 1011, 1404
BfaI CTAG 2 cut(s) 816, 927
BfmI CTRYAG 2 cut(s) 291, 1365
BfuI GTATCC 2 cut(s) 462, 516
BglI GCCNNNNNGGC 1 cut(s) 62
BglII AGATCT 1 cut(s) 379
BisI GCNGC 6 cut(s) 66, 294, 641, 740, 1394, 1650
BlsI GCNGC 6 cut(s) 67, 295, 642, 741, 1395, 1651
Bme1390I CCNGG 2 cut(s) 1219, 1380
Bme18I GGWCC 2 cut(s) 1430, 1507
BmgT120I GGNCC 4 cut(s) 55, 287, 1430, 1507
BmiI GGNNCC 1 cut(s) 1509
BmrFI CCNGG 2 cut(s) 1219, 1380
BmrI ACTGGG 1 cut(s) 738
BmsI GCATC 9 cut(s) 325, 378, 379, 411, 768, 856, 1099, 1317, 1339
BmuI ACTGGG 1 cut(s) 738
BpiI GAAGAC 1 cut(s) 405
BpmI CTGGAG 1 cut(s) 1503
BpuEI CTTGAG 1 cut(s) 71
BpuMI CCSGG 2 cut(s) 1219, 1380
Bsa29I ATCGAT 1 cut(s) 864
BsaI GGTCTC 1 cut(s) 1011
BsaJI CCNNGG 5 cut(s) 479, 529, 793, 964, 1591
Bse1I ACTGG 5 cut(s) 221, 652, 744, 1486, 1632
Bse3DI GCAATG 2 cut(s) 427, 946
BseCI ATCGAT 1 cut(s) 864
BseDI CCNNGG 5 cut(s) 479, 529, 793, 964, 1591
BseGI GGATG 4 cut(s) 369, 732, 881, 1636
BseMI GCAATG 2 cut(s) 427, 946
BseMII CTCAG 6 cut(s) 198, 765, 894, 1314, 1415, 1508
BseNI ACTGG 5 cut(s) 221, 652, 744, 1486, 1632
BseRI GAGGAG 1 cut(s) 1500
BseSI GKGCMC 3 cut(s) 1258, 1380, 1607
BseXI GCAGC 4 cut(s) 52, 305, 751, 1405
BsgI GTGCAG 1 cut(s) 1026
BshFI GGCC 5 cut(s) 56, 288, 487, 792, 1177
BshVI ATCGAT 1 cut(s) 864
BsiHKAI GWGCWC 2 cut(s) 130, 1258
BsiSI CCGG 4 cut(s) 736, 870, 1218, 1380
BslFI GGGAC 3 cut(s) 601, 772, 1430
BsmAI GTCTC 2 cut(s) 1011, 1404
BsmFI GGGAC 3 cut(s) 601, 772, 1430
BsnI GGCC 5 cut(s) 56, 288, 487, 792, 1177
Bso31I GGTCTC 1 cut(s) 1011
Bsp1286I GDGCHC 4 cut(s) 130, 1258, 1380, 1607
Bsp19I CCATGG 1 cut(s) 529
BspACI CCGC 5 cut(s) 68, 228, 314, 640, 649
BspANI GGCC 5 cut(s) 56, 288, 487, 792, 1177
BspCNI CTCAG 6 cut(s) 199, 766, 895, 1315, 1414, 1509
BspDI ATCGAT 1 cut(s) 864
BspHI TCATGA 2 cut(s) 1135, 1384
BspLI GGNNCC 1 cut(s) 1509
BspMAI CTGCAG 2 cut(s) 295, 1369
BspPI GGATC 4 cut(s) 18, 38, 880, 1535
BspTNI GGTCTC 1 cut(s) 1011
BsrDI GCAATG 2 cut(s) 427, 946
BsrI ACTGG 5 cut(s) 221, 652, 744, 1486, 1632
BssECI CCNNGG 5 cut(s) 479, 529, 793, 964, 1591
BssSI CACGAG 1 cut(s) 180
BssT1I CCWWGG 4 cut(s) 479, 529, 964, 1591
Bst2BI CACGAG 1 cut(s) 180
Bst4CI ACNGT 2 cut(s) 411, 1459
Bst6I CTCTTC 1 cut(s) 989
BstC8I GCNNGC 3 cut(s) 218, 807, 1277
BstDEI CTNAG 7 cut(s) 207, 713, 774, 903, 1323, 1401, 1517
BstDSI CCRYGG 2 cut(s) 529, 793
BstF5I GGATG 4 cut(s) 369, 732, 881, 1636
BstMAI GTCTC 2 cut(s) 1011, 1404
BstMWI GCNNNNNNNGC 3 cut(s) 62, 1183, 1211
BstNSI RCATGY 6 cut(s) 616, 647, 809, 1070, 1279, 1283
BstSCI CCNGG 2 cut(s) 1217, 1378
BstSFI CTRYAG 2 cut(s) 291, 1365
BstSLI GKGCMC 3 cut(s) 1258, 1380, 1607
BstV1I GCAGC 4 cut(s) 52, 305, 751, 1405
BstV2I GAAGAC 1 cut(s) 405
BstX2I RGATCY 2 cut(s) 379, 872
BstYI RGATCY 2 cut(s) 379, 872
Bsu15I ATCGAT 1 cut(s) 864
BsuI GTATCC 2 cut(s) 462, 516
BsuRI GGCC 5 cut(s) 56, 288, 487, 792, 1177
BsuTUI ATCGAT 1 cut(s) 864
BtgI CCRYGG 2 cut(s) 529, 793
BtsCI GGATG 4 cut(s) 369, 732, 881, 1636
BtsI GCAGTG 1 cut(s) 1605
BtsIMutI CAGTG 3 cut(s) 846, 1104, 1605
Cac8I GCNNGC 3 cut(s) 218, 807, 1277
CciI TCATGA 2 cut(s) 1135, 1384
Cfr13I GGNCC 4 cut(s) 55, 287, 1430, 1507
ClaI ATCGAT 1 cut(s) 864
CseI GACGC 1 cut(s) 1203
Csp6I GTAC 2 cut(s) 945, 1241
CspCI CAANNNNNGTGG 2 cut(s) 163, 198
CviQI GTAC 2 cut(s) 945, 1241
DdeI CTNAG 7 cut(s) 207, 713, 774, 903, 1323, 1401, 1517
DrdI GACNNNNNNGTC 1 cut(s) 1535
DseDI GACNNNNNNGTC 1 cut(s) 1535
EaeI YGGCCR 3 cut(s) 485, 790, 1175
Eam1104I CTCTTC 1 cut(s) 989
EarI CTCTTC 1 cut(s) 989
EciI GGCGGA 1 cut(s) 638
Eco130I CCWWGG 4 cut(s) 479, 529, 964, 1591
Eco31I GGTCTC 1 cut(s) 1011
Eco47I GGWCC 2 cut(s) 1430, 1507
EcoO109I RGGNCCY 1 cut(s) 1507
EcoRI GAATTC 1 cut(s) 468
EcoT14I CCWWGG 4 cut(s) 479, 529, 964, 1591
EcoT22I ATGCAT 3 cut(s) 1068, 1281, 1332
ErhI CCWWGG 4 cut(s) 479, 529, 964, 1591
FalI AAGNNNNNCTT 2 cut(s) 217, 249
FaqI GGGAC 3 cut(s) 601, 772, 1430
FauNDI CATATG 1 cut(s) 1062
FbaI TGATCA 2 cut(s) 97, 1030
Fnu4HI GCNGC 6 cut(s) 66, 294, 641, 740, 1394, 1650
FokI GGATG 4 cut(s) 356, 719, 868, 1643
Fsp4HI GCNGC 6 cut(s) 66, 294, 641, 740, 1394, 1650
FspBI CTAG 2 cut(s) 816, 927
GluI GCNGC 6 cut(s) 66, 294, 641, 740, 1394, 1650
GsuI CTGGAG 1 cut(s) 1503
HaeIII GGCC 5 cut(s) 56, 288, 487, 792, 1177
HapII CCGG 4 cut(s) 736, 870, 1218, 1380
HgaI GACGC 1 cut(s) 1203
HincII GTYRAC 1 cut(s) 594
HindII GTYRAC 1 cut(s) 594
HindIII AAGCTT 1 cut(s) 47
HinfI GANTC 5 cut(s) 15, 139, 319, 538, 1443
HpaI GTTAAC 1 cut(s) 594
HpaII CCGG 4 cut(s) 736, 870, 1218, 1380
HphI GGTGA 3 cut(s) 523, 809, 992
Hpy166II GTNNAC 2 cut(s) 594, 1256
Hpy188I TCNGA 8 cut(s) 97, 238, 248, 537, 1027, 1404, 1518, 1583
Hpy188III TCNNGA 5 cut(s) 123, 206, 1136, 1148, 1385
Hpy8I GTNNAC 2 cut(s) 594, 1256
HpyAV CCTTC 3 cut(s) 102, 205, 1507
HpyCH4III ACNGT 2 cut(s) 411, 1459
HpyF10VI GCNNNNNNNGC 3 cut(s) 62, 1183, 1211
HpyF3I CTNAG 7 cut(s) 207, 713, 774, 903, 1323, 1401, 1517
Ksp22I TGATCA 2 cut(s) 97, 1030
KspAI GTTAAC 1 cut(s) 594
Lsp1109I GCAGC 4 cut(s) 52, 305, 751, 1405
LweI GCATC 9 cut(s) 325, 378, 379, 411, 768, 856, 1099, 1317, 1339
MaeI CTAG 2 cut(s) 816, 927
MaeIII GTNAC 1 cut(s) 1162
MboII GAAGA 7 cut(s) 124, 405, 512, 583, 734, 1006, 1151
MfeI CAATTG 1 cut(s) 1047
MflI RGATCY 2 cut(s) 379, 872
MhlI GDGCHC 4 cut(s) 130, 1258, 1380, 1607
MlsI TGGCCA 1 cut(s) 487
MluCI AATT 8 cut(s) 201, 358, 468, 515, 696, 1047, 1131, 1425
MluNI TGGCCA 1 cut(s) 487
MlyI GAGTC 2 cut(s) 547, 1452
MmeI TCCRAC 1 cut(s) 1606
Mox20I TGGCCA 1 cut(s) 487
Mph1103I ATGCAT 3 cut(s) 1068, 1281, 1332
MscI TGGCCA 1 cut(s) 487
MseI TTAA 4 cut(s) 566, 593, 860, 1224
MslI CAYNNNNRTG 4 cut(s) 1065, 1107, 1280, 1284
Msp20I TGGCCA 1 cut(s) 487
MspA1I CMGCKG 1 cut(s) 599
MspI CCGG 4 cut(s) 736, 870, 1218, 1380
MspR9I CCNGG 2 cut(s) 1219, 1380
MunI CAATTG 1 cut(s) 1047
MwoI GCNNNNNNNGC 3 cut(s) 62, 1183, 1211
NciI CCSGG 2 cut(s) 1219, 1380
NcoI CCATGG 1 cut(s) 529
NdeI CATATG 1 cut(s) 1062
NlaIV GGNNCC 1 cut(s) 1509
NmeAIII GCCGAG 1 cut(s) 743
NmuCI GTSAC 1 cut(s) 1162
NsiI ATGCAT 3 cut(s) 1068, 1281, 1332
NspI RCATGY 6 cut(s) 616, 647, 809, 1070, 1279, 1283
PaeI GCATGC 2 cut(s) 809, 1279
PagI TCATGA 2 cut(s) 1135, 1384
PciI ACATGT 1 cut(s) 612
PfeI GAWTC 3 cut(s) 15, 139, 319
PflMI CCANNNNNTGG 1 cut(s) 1439
PkrI GCNGC 6 cut(s) 67, 295, 642, 741, 1395, 1651
PleI GAGTC 2 cut(s) 546, 1451
PpsI GAGTC 2 cut(s) 546, 1451
PpuMI RGGWCCY 1 cut(s) 1507
PscI ACATGT 1 cut(s) 612
PsiI TTATAA 2 cut(s) 549, 1356
Psp5II RGGWCCY 1 cut(s) 1507
PspN4I GGNNCC 1 cut(s) 1509
PspPI GGNCC 4 cut(s) 55, 287, 1430, 1507
PspPPI RGGWCCY 1 cut(s) 1507
PstI CTGCAG 2 cut(s) 295, 1369
PsuI RGATCY 2 cut(s) 379, 872
PvuII CAGCTG 1 cut(s) 599
RsaI GTAC 2 cut(s) 946, 1242
RsaNI GTAC 2 cut(s) 945, 1241
RseI CAYNNNNRTG 4 cut(s) 1065, 1107, 1280, 1284
SaqAI TTAA 4 cut(s) 566, 593, 860, 1224
SatI GCNGC 6 cut(s) 66, 294, 641, 740, 1394, 1650
Sau96I GGNCC 4 cut(s) 55, 287, 1430, 1507
SchI GAGTC 2 cut(s) 547, 1452
ScrFI CCNGG 2 cut(s) 1219, 1380
SduI GDGCHC 4 cut(s) 130, 1258, 1380, 1607
SfaNI GCATC 9 cut(s) 325, 378, 379, 411, 768, 856, 1099, 1317, 1339
SfcI CTRYAG 2 cut(s) 291, 1365
SinI GGWCC 2 cut(s) 1430, 1507
SmiMI CAYNNNNRTG 4 cut(s) 1065, 1107, 1280, 1284
SmlI CTYRAG 1 cut(s) 50
SmoI CTYRAG 1 cut(s) 50
SphI GCATGC 2 cut(s) 809, 1279
Sse9I AATT 8 cut(s) 201, 358, 468, 515, 696, 1047, 1131, 1425
SsiI CCGC 5 cut(s) 68, 228, 314, 640, 649
SspI AATATT 1 cut(s) 1566
SspMI CTAG 2 cut(s) 816, 927
StyD4I CCNGG 2 cut(s) 1217, 1378
StyI CCWWGG 4 cut(s) 479, 529, 964, 1591
TaaI ACNGT 2 cut(s) 411, 1459
TaqI TCGA 6 cut(s) 13, 106, 122, 864, 1539, 1617
TasI AATT 8 cut(s) 201, 358, 468, 515, 696, 1047, 1131, 1425
TauI GCSGC 1 cut(s) 643
TfiI GAWTC 3 cut(s) 15, 139, 319
Tru1I TTAA 4 cut(s) 566, 593, 860, 1224
Tru9I TTAA 4 cut(s) 566, 593, 860, 1224
TscAI CASTG 3 cut(s) 853, 1111, 1612
TseFI GTSAC 1 cut(s) 1162
TseI GCWGC 5 cut(s) 65, 293, 739, 1393, 1649
Tsp45I GTSAC 1 cut(s) 1162
TspDTI ATGAA 9 cut(s) 324, 513, 870, 1124, 1152, 1427, 1431, 1602, 1638
TspRI CASTG 3 cut(s) 853, 1111, 1612
Van91I CCANNNNNTGG 1 cut(s) 1439
VneI GTGCAC 1 cut(s) 1254
VpaK11BI GGWCC 2 cut(s) 1430, 1507
XapI RAATTY 1 cut(s) 468
XceI RCATGY 6 cut(s) 616, 647, 809, 1070, 1279, 1283
XspI CTAG 2 cut(s) 816, 927
Zsp2I ATGCAT 3 cut(s) 1068, 1281, 1332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.