Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0008737

Physical Location & Seq

Genomic Coordinates Forward (+)

78404349 .. 78406761

Gene Structure 2413 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG560000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1824 bp

ATGGGTGACCTTGGGGAGGTTGGACCTGAAATTAGTTCGGATATAGAAGAAGACTTGAGGTGTGATAATTTAGTGGAGAAAGATGTCAGTGATGAGGAGATTGATCCGGAAGAGCTGGAGAGACGGATGTGGAAGGATCGAATCAAACTCAAAAGGATCAAAGAAAAAGAAAAACAGAAAATTGAGGCTCAACAAGCTGCGGAAAGGCTGAAGCCCAAACAGACCACTGATCAGGCTCGAAGGAAGAAAATGTCAAGAGCACAAGATGGAATTCTAAAGTATATGTTGAAGCTGATGGAAGTGTGTCAAGCTCGTGGATTTGTGTATGGTATCATTCCTGAGAAGGGCAAGCCAGTAAGCGGTGCGTCTGATAACATCAGAGCATGGTGGAAAGAAAAAGTGAAGTTTGATAAGAATGGCCCTGCAGCCATAGACAAGTATGAAGCAGAGATTCTTGCCATGACTGATGCGGACAATAACCGAAATGGTAATTCCCAGACCATCCTCCAAGATCTACAAGATGCAACTCTTGGTTCTCTACTATCTTCATTGATGCAACATTGCGACCCCCCTCAAAGGAAGTATCCATTAGAAAAGGCAGTTCCGCCTCCTTGGTGGCCGACAGGAAATGAGGATTGGTGGATGAAATCAGGGTTACCCTGTGGTCAGAGTCCTCCTTATAAGAAGCCACATGACTTAAAGAAGATGTGGAAAGTTGGGGTGTTAACAGCTGTGATAAAGCACATGTCCCCTGATATTGCAAAGATAAGGCGGCATGTCCGTCAGTCAAAATGCTTACAGGATAAGATGACAGCAAAGGAGAGTGCAATTTGGTTGGGGGTTCTAAGTCGAGAAGAAGCCCTCATTCGACAACCCAGTAGCGATAATGGGACATCTGGCATAACTGAGATGCCACGTCGTGGCCGTGGTGAAAAGCATGCTACTGCTAGTAGTAACAGTGATTATGATGTTGATGGTACTGATAAGGAGCTAATCGATGCAGGATCTGTTTCATCCAAAGATGACAGGAGGACTGAGCTGATGGATGTAGAGCCATCTAGCAATCTACGCAGTGGTACTCCTACTAATCATGTCCAAGATAAAGAGAGAGGTGAAAAGCGAAGAAAGAGAAAAAGGGCTCCTGTAAGACCAAGCTCTGATGATAAACTTCCTGCACCAAGTCACAATGAGCCTTTGCATGTTGAACCATTAAATGCTTTGCCTGATATAAACCACACTGATGCACAGATGATTGGATTTCCAATTCATGAAAATCAACAGGAAAATGTTTCAGTCACAACTTTACGGCCACCAGAGCAAGATCTTGATGTCCAAGCATTACCGGCGTCCGAGTTTAACTACTATGCTGATGTACCTCCTGATGGTGTAACTGCGACGACACAGGGCATGCATGTGGGTGGAACACCGCTGCTTTATCATGGGATGCAAAGTGCTGAGATGCATCATGGAAATATGTATAACCTTTATAATCCATCAGCAGAACATGTGCCCGGTCATGATAGGCAGCTGTCTCAGATTGGCATGAATGAACTGCAAATTGGACCAGCAGATGTTGTCCCTTTACAAACTATAAGAAATGGAAATGAGATTACTGGAGGAGATATGCCATTCTATGCAAAAGACCCATTTCAGAGTGCGCAAGACAGAACTGTAGATGCTAACTTTGGCTCTCCAATTGACAGCCTGTCATTAGATTATGGGGGTCTATTTAACAGCCCATTCCGACTTGACCTTGGAATTGAGGGCACTGGTTCATTAGATGACCTGAATGTGGATGAAATGATGGCATACTTTGCAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000160 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006355 GO:0007154 GO:0007165 GO:0008150 GO:0009719 GO:0009723 GO:0009725 GO:0009755 GO:0009873 GO:0009889 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010039 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031326 GO:0032870 GO:0035556 GO:0042221 GO:0042762 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070887 GO:0071241 GO:0071248 GO:0071281 GO:0071310 GO:0071369 GO:0071495 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

EIN3

Protein Analysis

607

Amino Acids

67.91

Weight (kDa)

5.52

Isoelectric Point (pI)

59.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EIN3_DNA-bd	PF04873	37 - 286	1.3e-127	Ethylene insensitive 3, DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0008737)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73730 AT1G73730
fragaria_vesca	FvH4_3g43580 FvH4_3g43580
malus_domestica	MD03G1020800.v1.1 MD11G1022400.v1.1
prunus_persica	Prupe.6G018200_v2.0.a1 Prupe.6G018200_v2.0.a1
pyrus_communis	pycom03g01780 pycom11g01800
rosa_chinensis	RchiOBHm_Chr5g0078151
rosa_laevigata	RLG00000036758
rosa_multiflora	Rmu_sc0018349.1_g000004 Rmu_sc0018349.1_g000007
rosa_roxburghii	Rroxscaffold_1G00003980
rosa_rugosa	Rorug05G0459100 Rorug05G0459200 Rorug05G0459300
rosa_samantha	Rh5AG513600 Rh5BG536600 Rh5CG560000 Rh5DG548200
rosa_wichuraiana	Rw5G047660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	681, 1488
Acc16I	TGCGCA	1 cut(s)	1659
AccB7I	CCANNNNNTGG	1 cut(s)	920
AccIII	TCCGGA	1 cut(s)	106
AciI	CCGC	6 cut(s)	200, 360, 470, 605, 772, 1427
AclWI	GGATC	4 cut(s)	98, 144, 164, 1012
AcoI	YGGCCR	3 cut(s)	617, 922, 1307
AcsI	RAATTY	1 cut(s)	270
AcuI	CTGAAG	1 cut(s)	230
AcyI	GRCGYC	1 cut(s)	1346
AdeI	CACNNNGTG	1 cut(s)	920
AfaI	GTAC	3 cut(s)	979, 1078, 1374
AfiI	CCNNNNNNNGG	7 cut(s)	16, 344, 359, 576, 920, 1382, 1792
AflIII	ACRYGT	2 cut(s)	744, 1504
AgsI	TTSAA	2 cut(s)	289, 1205
AhdI	GACNNNNNGTC	1 cut(s)	1705
AjiI	CACGTC	1 cut(s)	917
AjuI	GAANNNNNNNTTGG	4 cut(s)	619, 651, 1542, 1574
AluBI	AGCT	9 cut(s)	115, 197, 292, 311, 731, 991, 1039, 1155, 1528
AluI	AGCT	9 cut(s)	115, 197, 292, 311, 731, 991, 1039, 1155, 1528
Alw21I	GWGCWC	1 cut(s)	262
Alw26I	GTCTC	2 cut(s)	115, 1536
AlwI	GGATC	4 cut(s)	98, 144, 164, 1012
AlwNI	CAGNNNCTG	1 cut(s)	1007
Aor13HI	TCCGGA	1 cut(s)	106
AoxI	GGCC	4 cut(s)	418, 617, 922, 1307
ApeKI	GCWGC	5 cut(s)	197, 425, 1429, 1525, 1817
ApoI	RAATTY	1 cut(s)	270
AspLEI	GCGC	1 cut(s)	1660
AspS9I	GGNCC	3 cut(s)	23, 419, 1562
AsuC2I	CCSGG	1 cut(s)	1512
AsuHPI	GGTGA	3 cut(s)	17, 941, 1124
AvaII	GGWCC	2 cut(s)	23, 1562
BaeGI	GKGCMC	2 cut(s)	1512, 1769
BanII	GRGCYC	1 cut(s)	1141
BauI	CACGAG	1 cut(s)	312
BbsI	GAAGAC	1 cut(s)	57
Bbv12I	GWGCWC	1 cut(s)	262
BbvI	GCAGC	4 cut(s)	184, 437, 1416, 1537
BccI	CCATC	9 cut(s)	260, 289, 509, 968, 1036, 1063, 1376, 1501, 1798
BceAI	ACGGC	2 cut(s)	909, 1322
BciVI	GTATCC	1 cut(s)	594
BclI	TGATCA	1 cut(s)	229
BcnI	CCSGG	1 cut(s)	1512
BcoDI	GTCTC	2 cut(s)	115, 1536
BfaI	CTAG	2 cut(s)	948, 1059
BfmI	CTRYAG	2 cut(s)	423, 1671
BfuI	GTATCC	1 cut(s)	594
BglII	AGATCT	2 cut(s)	511, 1321
BisI	GCNGC	6 cut(s)	198, 426, 773, 1430, 1526, 1818
BlsI	GCNGC	6 cut(s)	199, 427, 774, 1431, 1527, 1819
Bme1390I	CCNGG	1 cut(s)	1512
Bme18I	GGWCC	2 cut(s)	23, 1562
BmeRI	GACNNNNNGTC	1 cut(s)	1705
BmgBI	CACGTC	1 cut(s)	917
BmgT120I	GGNCC	3 cut(s)	23, 419, 1562
BmiI	GGNNCC	1 cut(s)	1140
BmrFI	CCNGG	1 cut(s)	1512
BmrI	ACTGGG	1 cut(s)	870
BmuI	ACTGGG	1 cut(s)	870
BpiI	GAAGAC	1 cut(s)	57
BpmI	CTGGAG	2 cut(s)	137, 1635
BpuEI	CTTGAG	1 cut(s)	76
BpuMI	CCSGG	1 cut(s)	1512
Bsa29I	ATCGAT	1 cut(s)	996
BsaHI	GRCGYC	1 cut(s)	1346
BsaJI	CCNNGG	4 cut(s)	10, 611, 925, 1753
BsaWI	WCCGGW	1 cut(s)	106
Bsc4I	CCNNNNNNNGG	7 cut(s)	16, 344, 359, 576, 920, 1382, 1792
Bse118I	RCCGGY	1 cut(s)	1342
Bse1I	ACTGG	4 cut(s)	353, 876, 1618, 1774
Bse3DI	GCAATG	1 cut(s)	559
BseAI	TCCGGA	1 cut(s)	106
BseCI	ATCGAT	1 cut(s)	996
BseDI	CCNNGG	4 cut(s)	10, 611, 925, 1753
BseGI	GGATG	7 cut(s)	132, 501, 648, 1013, 1051, 1449, 1801
BseLI	CCNNNNNNNGG	7 cut(s)	16, 344, 359, 576, 920, 1382, 1792
BseMI	GCAATG	1 cut(s)	559
BseMII	CTCAG	5 cut(s)	330, 897, 1026, 1446, 1547
BseNI	ACTGG	4 cut(s)	353, 876, 1618, 1774
BseRI	GAGGAG	2 cut(s)	110, 1632
BseSI	GKGCMC	2 cut(s)	1512, 1769
BseXI	GCAGC	4 cut(s)	184, 437, 1416, 1537
BsgI	GTGCAG	1 cut(s)	1158
BshFI	GGCC	4 cut(s)	420, 619, 924, 1309
BshVI	ATCGAT	1 cut(s)	996
BsiHKAI	GWGCWC	1 cut(s)	262
BsiSI	CCGG	3 cut(s)	107, 1343, 1512
BslFI	GGGAC	3 cut(s)	733, 904, 1562
BslI	CCNNNNNNNGG	7 cut(s)	16, 344, 359, 576, 920, 1382, 1792
BsmAI	GTCTC	2 cut(s)	115, 1536
BsmBI	CGTCTC	1 cut(s)	115
BsmFI	GGGAC	3 cut(s)	733, 904, 1562
BsnI	GGCC	4 cut(s)	420, 619, 924, 1309
Bsp1286I	GDGCHC	4 cut(s)	262, 1141, 1512, 1769
Bsp13I	TCCGGA	1 cut(s)	106
Bsp143I	GATC	7 cut(s)	103, 136, 156, 229, 511, 1004, 1321
BspACI	CCGC	6 cut(s)	200, 360, 470, 605, 772, 1427
BspANI	GGCC	4 cut(s)	420, 619, 924, 1309
BspCNI	CTCAG	5 cut(s)	331, 898, 1027, 1447, 1546
BspDI	ATCGAT	1 cut(s)	996
BspEI	TCCGGA	1 cut(s)	106
BspHI	TCATGA	2 cut(s)	1267, 1516
BspLI	GGNNCC	1 cut(s)	1140
BspMAI	CTGCAG	1 cut(s)	427
BspPI	GGATC	4 cut(s)	98, 144, 164, 1012
BspQI	GCTCTTC	1 cut(s)	105
BsrDI	GCAATG	1 cut(s)	559
BsrFI	RCCGGY	1 cut(s)	1342
BsrI	ACTGG	4 cut(s)	353, 876, 1618, 1774
BssAI	RCCGGY	1 cut(s)	1342
BssECI	CCNNGG	4 cut(s)	10, 611, 925, 1753
BssMI	GATC	7 cut(s)	103, 136, 156, 229, 511, 1004, 1321
BssNI	GRCGYC	1 cut(s)	1346
BssSI	CACGAG	1 cut(s)	312
BssT1I	CCWWGG	3 cut(s)	10, 611, 1753
Bst2BI	CACGAG	1 cut(s)	312
Bst4CI	ACNGT	2 cut(s)	959, 1672
Bst6I	CTCTTC	1 cut(s)	105
BstACI	GRCGYC	1 cut(s)	1346
BstAPI	GCANNNNNTGC	1 cut(s)	1814
BstC8I	GCNNGC	3 cut(s)	350, 939, 1409
BstDEI	CTNAG	6 cut(s)	339, 845, 906, 1035, 1455, 1533
BstDSI	CCRYGG	1 cut(s)	925
BstEII	GGTNACC	2 cut(s)	5, 654
BstENI	CCTNNNNNAGG	1 cut(s)	14
BstF5I	GGATG	7 cut(s)	132, 501, 648, 1013, 1051, 1449, 1801
BstHHI	GCGC	1 cut(s)	1660
BstKTI	GATC	7 cut(s)	106, 139, 159, 232, 514, 1007, 1324
BstMAI	GTCTC	2 cut(s)	115, 1536
BstMBI	GATC	7 cut(s)	103, 136, 156, 229, 511, 1004, 1321
BstMWI	GCNNNNNNNGC	5 cut(s)	194, 1068, 1315, 1343, 1814
BstNSI	RCATGY	7 cut(s)	748, 779, 941, 1202, 1411, 1415, 1508
BstPI	GGTNACC	2 cut(s)	5, 654
BstSCI	CCNGG	1 cut(s)	1510
BstSFI	CTRYAG	2 cut(s)	423, 1671
BstSLI	GKGCMC	2 cut(s)	1512, 1769
BstV1I	GCAGC	4 cut(s)	184, 437, 1416, 1537
BstV2I	GAAGAC	1 cut(s)	57
BstX2I	RGATCY	3 cut(s)	511, 1004, 1321
BstYI	RGATCY	3 cut(s)	511, 1004, 1321
Bsu15I	ATCGAT	1 cut(s)	996
BsuI	GTATCC	1 cut(s)	594
BsuRI	GGCC	4 cut(s)	420, 619, 924, 1309
BsuTUI	ATCGAT	1 cut(s)	996
BtgI	CCRYGG	1 cut(s)	925
BtrI	CACGTC	1 cut(s)	917
BtsCI	GGATG	7 cut(s)	132, 501, 648, 1013, 1051, 1449, 1801
BtsI	GCAGTG	1 cut(s)	1078
BtsIMutI	CAGTG	6 cut(s)	94, 225, 964, 1078, 1236, 1767
Cac8I	GCNNGC	3 cut(s)	350, 939, 1409
CaiI	CAGNNNCTG	1 cut(s)	1007
CciI	TCATGA	2 cut(s)	1267, 1516
CfoI	GCGC	1 cut(s)	1660
Cfr10I	RCCGGY	1 cut(s)	1342
Cfr13I	GGNCC	3 cut(s)	23, 419, 1562
ClaI	ATCGAT	1 cut(s)	996
CseI	GACGC	2 cut(s)	354, 1335
Csp6I	GTAC	3 cut(s)	978, 1077, 1373
CviQI	GTAC	3 cut(s)	978, 1077, 1373
DdeI	CTNAG	6 cut(s)	339, 845, 906, 1035, 1455, 1533
DpnI	GATC	7 cut(s)	105, 138, 158, 231, 513, 1006, 1323
DpnII	GATC	7 cut(s)	103, 136, 156, 229, 511, 1004, 1321
DraIII	CACNNNGTG	1 cut(s)	920
DriI	GACNNNNNGTC	1 cut(s)	1705
EaeI	YGGCCR	3 cut(s)	617, 922, 1307
Eam1104I	CTCTTC	1 cut(s)	105
Eam1105I	GACNNNNNGTC	1 cut(s)	1705
EarI	CTCTTC	1 cut(s)	105
EciI	GGCGGA	1 cut(s)	594
Eco130I	CCWWGG	3 cut(s)	10, 611, 1753
Eco24I	GRGCYC	1 cut(s)	1141
Eco47I	GGWCC	2 cut(s)	23, 1562
Eco57I	CTGAAG	1 cut(s)	230
Eco91I	GGTNACC	2 cut(s)	5, 654
EcoNI	CCTNNNNNAGG	1 cut(s)	14
EcoO65I	GGTNACC	2 cut(s)	5, 654
EcoRI	GAATTC	1 cut(s)	270
EcoT14I	CCWWGG	3 cut(s)	10, 611, 1753
EcoT22I	ATGCAT	2 cut(s)	1413, 1464
EcoT38I	GRGCYC	1 cut(s)	1141
ErhI	CCWWGG	3 cut(s)	10, 611, 1753
Esp3I	CGTCTC	1 cut(s)	115
FaqI	GGGAC	3 cut(s)	733, 904, 1562
FbaI	TGATCA	1 cut(s)	229
Fnu4HI	GCNGC	6 cut(s)	198, 426, 773, 1430, 1526, 1818
FokI	GGATG	7 cut(s)	139, 488, 655, 1000, 1058, 1456, 1808
FriOI	GRGCYC	1 cut(s)	1141
Fsp4HI	GCNGC	6 cut(s)	198, 426, 773, 1430, 1526, 1818
FspBI	CTAG	2 cut(s)	948, 1059
FspI	TGCGCA	1 cut(s)	1659
GlaI	GCGC	1 cut(s)	1659
GluI	GCNGC	6 cut(s)	198, 426, 773, 1430, 1526, 1818
GsuI	CTGGAG	2 cut(s)	137, 1635
HaeIII	GGCC	4 cut(s)	420, 619, 924, 1309
HapII	CCGG	3 cut(s)	107, 1343, 1512
HgaI	GACGC	2 cut(s)	354, 1335
HhaI	GCGC	1 cut(s)	1660
Hin1I	GRCGYC	1 cut(s)	1346
Hin6I	GCGC	1 cut(s)	1658
HinP1I	GCGC	1 cut(s)	1658
HincII	GTYRAC	1 cut(s)	726
HindII	GTYRAC	1 cut(s)	726
HinfI	GANTC	3 cut(s)	141, 451, 670
HpaI	GTTAAC	1 cut(s)	726
HpaII	CCGG	3 cut(s)	107, 1343, 1512
HphI	GGTGA	3 cut(s)	17, 941, 1124
Hpy166II	GTNNAC	1 cut(s)	726
Hpy188I	TCNGA	9 cut(s)	40, 370, 380, 669, 1159, 1351, 1536, 1653, 1745
Hpy188III	TCNNGA	8 cut(s)	107, 255, 338, 851, 1268, 1325, 1379, 1517
Hpy8I	GTNNAC	1 cut(s)	726
Hpy99I	CGWCG	2 cut(s)	921, 1399
HpyAV	CCTTC	3 cut(s)	127, 234, 337
HpyCH4III	ACNGT	2 cut(s)	959, 1672
HpyCH4IV	ACGT	1 cut(s)	916
HpyF10VI	GCNNNNNNNGC	5 cut(s)	194, 1068, 1315, 1343, 1814
HpyF3I	CTNAG	6 cut(s)	339, 845, 906, 1035, 1455, 1533
HpySE526I	ACGT	1 cut(s)	916
Hsp92I	GRCGYC	1 cut(s)	1346
HspAI	GCGC	1 cut(s)	1658
Kpn2I	TCCGGA	1 cut(s)	106
Ksp22I	TGATCA	1 cut(s)	229
KspAI	GTTAAC	1 cut(s)	726
Kzo9I	GATC	7 cut(s)	103, 136, 156, 229, 511, 1004, 1321
LguI	GCTCTTC	1 cut(s)	105
LmnI	GCTCC	2 cut(s)	988, 1144
Lsp1109I	GCAGC	4 cut(s)	184, 437, 1416, 1537
MaeI	CTAG	2 cut(s)	948, 1059
MaeII	ACGT	1 cut(s)	916
MaeIII	GTNAC	6 cut(s)	5, 654, 953, 1181, 1294, 1387
MalI	GATC	7 cut(s)	105, 138, 158, 231, 513, 1006, 1323
MboI	GATC	7 cut(s)	103, 136, 156, 229, 511, 1004, 1321
MboII	GAAGA	8 cut(s)	59, 62, 122, 256, 537, 715, 866, 1134
MfeI	CAATTG	1 cut(s)	1695
MflI	RGATCY	3 cut(s)	511, 1004, 1321
MhlI	GDGCHC	4 cut(s)	262, 1141, 1512, 1769
MlyI	GAGTC	1 cut(s)	679
MmeI	TCCRAC	1 cut(s)	1768
Mph1103I	ATGCAT	2 cut(s)	1413, 1464
MroI	TCCGGA	1 cut(s)	106
MseI	TTAA	5 cut(s)	698, 725, 1211, 1356, 1731
MslI	CAYNNNNRTG	3 cut(s)	1239, 1412, 1416
MspA1I	CMGCKG	3 cut(s)	731, 1429, 1528
MspI	CCGG	3 cut(s)	107, 1343, 1512
MspR9I	CCNGG	1 cut(s)	1512
MunI	CAATTG	1 cut(s)	1695
MwoI	GCNNNNNNNGC	5 cut(s)	194, 1068, 1315, 1343, 1814
NciI	CCSGG	1 cut(s)	1512
NdeII	GATC	7 cut(s)	103, 136, 156, 229, 511, 1004, 1321
NlaIV	GGNNCC	1 cut(s)	1140
NmuCI	GTSAC	3 cut(s)	5, 1181, 1294
NsbI	TGCGCA	1 cut(s)	1659
NsiI	ATGCAT	2 cut(s)	1413, 1464
NspI	RCATGY	7 cut(s)	748, 779, 941, 1202, 1411, 1415, 1508
PaeI	GCATGC	2 cut(s)	941, 1411
PagI	TCATGA	2 cut(s)	1267, 1516
PciI	ACATGT	2 cut(s)	744, 1504
PciSI	GCTCTTC	1 cut(s)	105
PcsI	WCGNNNNNNNCGW	1 cut(s)	922
PfeI	GAWTC	2 cut(s)	141, 451
PflMI	CCANNNNNTGG	1 cut(s)	920
PkrI	GCNGC	6 cut(s)	199, 427, 774, 1431, 1527, 1819
PleI	GAGTC	1 cut(s)	678
PpsI	GAGTC	1 cut(s)	678
PscI	ACATGT	2 cut(s)	744, 1504
PsiI	TTATAA	2 cut(s)	681, 1488
PspEI	GGTNACC	2 cut(s)	5, 654
PspN4I	GGNNCC	1 cut(s)	1140
PspPI	GGNCC	3 cut(s)	23, 419, 1562
PstI	CTGCAG	1 cut(s)	427
PstNI	CAGNNNCTG	1 cut(s)	1007
PsuI	RGATCY	3 cut(s)	511, 1004, 1321
PvuII	CAGCTG	2 cut(s)	731, 1528
RsaI	GTAC	3 cut(s)	979, 1078, 1374
RsaNI	GTAC	3 cut(s)	978, 1077, 1373
RseI	CAYNNNNRTG	3 cut(s)	1239, 1412, 1416
SapI	GCTCTTC	1 cut(s)	105
SaqAI	TTAA	5 cut(s)	698, 725, 1211, 1356, 1731
SatI	GCNGC	6 cut(s)	198, 426, 773, 1430, 1526, 1818
Sau3AI	GATC	7 cut(s)	103, 136, 156, 229, 511, 1004, 1321
Sau96I	GGNCC	3 cut(s)	23, 419, 1562
SchI	GAGTC	1 cut(s)	679
ScrFI	CCNGG	1 cut(s)	1512
SduI	GDGCHC	4 cut(s)	262, 1141, 1512, 1769
SfcI	CTRYAG	2 cut(s)	423, 1671
SinI	GGWCC	2 cut(s)	23, 1562
SmiMI	CAYNNNNRTG	3 cut(s)	1239, 1412, 1416
SmlI	CTYRAG	1 cut(s)	55
SmoI	CTYRAG	1 cut(s)	55
SphI	GCATGC	2 cut(s)	941, 1411
SsiI	CCGC	6 cut(s)	200, 360, 470, 605, 772, 1427
SspMI	CTAG	2 cut(s)	948, 1059
StyD4I	CCNGG	1 cut(s)	1510
StyI	CCWWGG	3 cut(s)	10, 611, 1753
TaaI	ACNGT	2 cut(s)	959, 1672
TaiI	ACGT	1 cut(s)	919
TaqI	TCGA	5 cut(s)	139, 238, 850, 868, 996
TauI	GCSGC	1 cut(s)	775
TfiI	GAWTC	2 cut(s)	141, 451
Tru1I	TTAA	5 cut(s)	698, 725, 1211, 1356, 1731
Tru9I	TTAA	5 cut(s)	698, 725, 1211, 1356, 1731
TscAI	CASTG	6 cut(s)	94, 232, 964, 1078, 1243, 1774
TseFI	GTSAC	3 cut(s)	5, 1181, 1294
TseI	GCWGC	5 cut(s)	197, 425, 1429, 1525, 1817
Tsp45I	GTSAC	3 cut(s)	5, 1181, 1294
TspGWI	ACGGA	2 cut(s)	139, 770
TspRI	CASTG	6 cut(s)	94, 232, 964, 1078, 1243, 1774
Van91I	CCANNNNNTGG	1 cut(s)	920
VpaK11BI	GGWCC	2 cut(s)	23, 1562
XagI	CCTNNNNNAGG	1 cut(s)	14
XapI	RAATTY	1 cut(s)	270
XceI	RCATGY	7 cut(s)	748, 779, 941, 1202, 1411, 1415, 1508
XspI	CTAG	2 cut(s)	948, 1059
Zsp2I	ATGCAT	2 cut(s)	1413, 1464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.