FvH4_4g00490

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
454376 .. 457609
3234 bp
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UTR
Exon/CDS
Intron
FvH4_4g00490.t1

Sequence Viewer

Length: 192 bp
ATGGCTGAATTAAACCTGGGTATACTGATAGATGTTGTGGATGAAGAATGGATGAAAGACACTCTTCCTGATGACGATCTTCCCCTGCCGCCTATGCTGGTTATAAGGACTGATGACACTGAGGATTCAAACCAGGAGACTCGCAAAGTTGATGGAGATACTTGGAATGATCTTGCCTTAGGATCTCAATAA

Protein Analysis

64

Amino Acids

7.11

Weight (kDa)

4.05

Isoelectric Point (pI)

30.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 104
AccI GTMKAC 1 cut(s) 22
AciI CCGC 1 cut(s) 89
AclWI GGATC 1 cut(s) 190
AgsI TTSAA 1 cut(s) 129
AjnI CCWGG 2 cut(s) 15, 132
Alw26I GTCTC 1 cut(s) 131
AlwI GGATC 1 cut(s) 190
AxyI CCTNAGG 1 cut(s) 178
BccI CCATC 1 cut(s) 146
BciT130I CCWGG 2 cut(s) 17, 134
BcoDI GTCTC 1 cut(s) 131
BisI GCNGC 1 cut(s) 89
BlsI GCNGC 1 cut(s) 90
Bme1390I CCNGG 2 cut(s) 17, 134
BmrFI CCNGG 2 cut(s) 17, 134
BsaBI GATNNNNATC 1 cut(s) 75
BsaJI CCNNGG 1 cut(s) 16
Bse21I CCTNAGG 1 cut(s) 178
Bse8I GATNNNNATC 1 cut(s) 75
BseBI CCWGG 2 cut(s) 17, 134
BseDI CCNNGG 1 cut(s) 16
BseGI GGATG 2 cut(s) 46, 57
BseJI GATNNNNATC 1 cut(s) 75
BseMII CTCAG 1 cut(s) 111
BsmAI GTCTC 1 cut(s) 131
Bsp143I GATC 3 cut(s) 76, 169, 182
BspACI CCGC 1 cut(s) 89
BspCNI CTCAG 1 cut(s) 112
BspPI GGATC 1 cut(s) 190
BssECI CCNNGG 1 cut(s) 16
BssMI GATC 3 cut(s) 76, 169, 182
BssNAI GTATAC 1 cut(s) 23
Bst1107I GTATAC 1 cut(s) 23
Bst2UI CCWGG 2 cut(s) 17, 134
Bst6I CTCTTC 1 cut(s) 69
BstDEI CTNAG 2 cut(s) 120, 178
BstF5I GGATG 2 cut(s) 46, 57
BstKTI GATC 3 cut(s) 79, 172, 185
BstMAI GTCTC 1 cut(s) 131
BstMBI GATC 3 cut(s) 76, 169, 182
BstMWI GCNNNNNNNGC 1 cut(s) 94
BstNI CCWGG 2 cut(s) 17, 134
BstSCI CCNGG 2 cut(s) 15, 132
BstX2I RGATCY 1 cut(s) 182
BstYI RGATCY 1 cut(s) 182
BstZ17I GTATAC 1 cut(s) 23
Bsu36I CCTNAGG 1 cut(s) 178
BtsCI GGATG 2 cut(s) 46, 57
BtsIMutI CAGTG 1 cut(s) 117
CviJI RGCY 1 cut(s) 5
CviKI_1 RGCY 1 cut(s) 5
DdeI CTNAG 2 cut(s) 120, 178
DpnI GATC 3 cut(s) 78, 171, 184
DpnII GATC 3 cut(s) 76, 169, 182
Eam1104I CTCTTC 1 cut(s) 69
EarI CTCTTC 1 cut(s) 69
Eco81I CCTNAGG 1 cut(s) 178
EcoRII CCWGG 2 cut(s) 15, 132
FaiI YATR 3 cut(s) 23, 95, 104
FalI AAGNNNNNCTT 2 cut(s) 48, 80
FblI GTMKAC 1 cut(s) 22
Fnu4HI GCNGC 1 cut(s) 89
FokI GGATG 2 cut(s) 53, 64
Fsp4HI GCNGC 1 cut(s) 89
GluI GCNGC 1 cut(s) 89
HinfI GANTC 2 cut(s) 125, 139
Hpy166II GTNNAC 1 cut(s) 23
Hpy188III TCNNGA 1 cut(s) 68
Hpy8I GTNNAC 1 cut(s) 23
HpyF10VI GCNNNNNNNGC 1 cut(s) 94
HpyF3I CTNAG 2 cut(s) 120, 178
Kzo9I GATC 3 cut(s) 76, 169, 182
LpnPI CCDG 7 cut(s) 2, 29, 81, 83, 98, 119, 146
MalI GATC 3 cut(s) 78, 171, 184
MboI GATC 3 cut(s) 76, 169, 182
MboII GAAGA 3 cut(s) 56, 56, 71
MflI RGATCY 1 cut(s) 182
MluCI AATT 1 cut(s) 8
MlyI GAGTC 1 cut(s) 133
MnlI CCTC 1 cut(s) 115
MseI TTAA 1 cut(s) 11
MspR9I CCNGG 2 cut(s) 17, 134
MvaI CCWGG 2 cut(s) 17, 134
MwoI GCNNNNNNNGC 1 cut(s) 94
NdeII GATC 3 cut(s) 76, 169, 182
PfeI GAWTC 1 cut(s) 125
PkrI GCNGC 1 cut(s) 90
PleI GAGTC 1 cut(s) 133
PpsI GAGTC 1 cut(s) 133
PsiI TTATAA 1 cut(s) 104
Psp6I CCWGG 2 cut(s) 15, 132
PspGI CCWGG 2 cut(s) 15, 132
PsuI RGATCY 1 cut(s) 182
SaqAI TTAA 1 cut(s) 11
SatI GCNGC 1 cut(s) 89
Sau3AI GATC 3 cut(s) 76, 169, 182
SchI GAGTC 1 cut(s) 133
ScrFI CCNGG 2 cut(s) 17, 134
SetI ASST 1 cut(s) 18
Sse9I AATT 1 cut(s) 8
SsiI CCGC 1 cut(s) 89
StyD4I CCNGG 2 cut(s) 15, 132
TasI AATT 1 cut(s) 8
TauI GCSGC 1 cut(s) 91
TfiI GAWTC 1 cut(s) 125
Tru1I TTAA 1 cut(s) 11
Tru9I TTAA 1 cut(s) 11
TscAI CASTG 1 cut(s) 124
TspDTI ATGAA 2 cut(s) 57, 68
TspRI CASTG 1 cut(s) 124
XmiI GTMKAC 1 cut(s) 22
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.