No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G73177 |
| fragaria_vesca | FvH4_4g00490 |
| malus_domestica | MD09G1239400.v1.1 |
| prunus_persica | Prupe.3G122600_v2.0.a1 Prupe.3G122600_v2.0.a1 Prupe.3G122600_v2.0.a1 Prupe.3G122600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr4g0385941 RchiOBHm_Chr4g0387841 RchiOBHm_Chr4g0387941 |
| rosa_multiflora | Rmu_sc0002509.1_g000032 |
| rosa_roxburghii | Rroxscaffold_5G00334450 Rroxscaffold_5G00334490 |
| rosa_rugosa | Rorug03G0303500 Rorug03G0303600 Rorug03G0313700 Rorug03G0313800 Rorug03G0313900 Rorug03G0314000 |
| rosa_samantha | Rh4AG007700 Rh4AG019000 Rh4BG005700 Rh4CG008500 Rh4DG007200 |
| rosa_wichuraiana | Rw4G000290 Rw4G001240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 104 |
| AccI | GTMKAC | 1 cut(s) | 22 |
| AciI | CCGC | 1 cut(s) | 89 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AjnI | CCWGG | 1 cut(s) | 15 |
| AoxI | GGCC | 1 cut(s) | 3 |
| AsuII | TTCGAA | 1 cut(s) | 128 |
| BciT130I | CCWGG | 1 cut(s) | 17 |
| BisI | GCNGC | 1 cut(s) | 89 |
| BlsI | GCNGC | 1 cut(s) | 90 |
| Bme1390I | CCNGG | 1 cut(s) | 17 |
| BmrFI | CCNGG | 1 cut(s) | 17 |
| Bpu14I | TTCGAA | 1 cut(s) | 128 |
| BsaBI | GATNNNNATC | 2 cut(s) | 75, 129 |
| BsaJI | CCNNGG | 2 cut(s) | 16, 120 |
| Bse8I | GATNNNNATC | 2 cut(s) | 75, 129 |
| BseBI | CCWGG | 1 cut(s) | 17 |
| BseDI | CCNNGG | 2 cut(s) | 16, 120 |
| BseGI | GGATG | 2 cut(s) | 46, 57 |
| BseJI | GATNNNNATC | 2 cut(s) | 75, 129 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp119I | TTCGAA | 1 cut(s) | 128 |
| Bsp143I | GATC | 2 cut(s) | 76, 169 |
| BspACI | CCGC | 1 cut(s) | 89 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspHI | TCATGA | 1 cut(s) | 185 |
| BspT104I | TTCGAA | 1 cut(s) | 128 |
| BssECI | CCNNGG | 2 cut(s) | 16, 120 |
| BssMI | GATC | 2 cut(s) | 76, 169 |
| BssNAI | GTATAC | 1 cut(s) | 23 |
| Bst1107I | GTATAC | 1 cut(s) | 23 |
| Bst2UI | CCWGG | 1 cut(s) | 17 |
| Bst6I | CTCTTC | 1 cut(s) | 69 |
| BstBI | TTCGAA | 1 cut(s) | 128 |
| BstF5I | GGATG | 2 cut(s) | 46, 57 |
| BstKTI | GATC | 2 cut(s) | 79, 172 |
| BstMBI | GATC | 2 cut(s) | 76, 169 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 94 |
| BstNI | CCWGG | 1 cut(s) | 17 |
| BstSCI | CCNGG | 1 cut(s) | 15 |
| BstZ17I | GTATAC | 1 cut(s) | 23 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 2 cut(s) | 46, 57 |
| CciI | TCATGA | 1 cut(s) | 185 |
| CviAII | CATG | 2 cut(s) | 167, 186 |
| CviJI | RGCY | 2 cut(s) | 5, 140 |
| CviKI_1 | RGCY | 2 cut(s) | 5, 140 |
| DpnI | GATC | 2 cut(s) | 78, 171 |
| DpnII | GATC | 2 cut(s) | 76, 169 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 69 |
| EarI | CTCTTC | 1 cut(s) | 69 |
| EcoRII | CCWGG | 1 cut(s) | 15 |
| FaeI | CATG | 2 cut(s) | 170, 189 |
| FaiI | YATR | 5 cut(s) | 23, 29, 104, 168, 187 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 48, 80 |
| FatI | CATG | 2 cut(s) | 166, 185 |
| FblI | GTMKAC | 1 cut(s) | 22 |
| Fnu4HI | GCNGC | 1 cut(s) | 89 |
| FokI | GGATG | 2 cut(s) | 53, 64 |
| Fsp4HI | GCNGC | 1 cut(s) | 89 |
| GluI | GCNGC | 1 cut(s) | 89 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| Hin1II | CATG | 2 cut(s) | 170, 189 |
| HinfI | GANTC | 2 cut(s) | 125, 130 |
| Hpy166II | GTNNAC | 1 cut(s) | 23 |
| Hpy188III | TCNNGA | 3 cut(s) | 68, 134, 186 |
| Hpy8I | GTNNAC | 1 cut(s) | 23 |
| HpyCH4V | TGCA | 1 cut(s) | 176 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 94 |
| Hsp92II | CATG | 2 cut(s) | 170, 189 |
| Kzo9I | GATC | 2 cut(s) | 76, 169 |
| LpnPI | CCDG | 6 cut(s) | 2, 29, 81, 83, 98, 119 |
| MalI | GATC | 2 cut(s) | 78, 171 |
| MboI | GATC | 2 cut(s) | 76, 169 |
| MboII | GAAGA | 3 cut(s) | 56, 56, 71 |
| MluCI | AATT | 2 cut(s) | 8, 147 |
| MnlI | CCTC | 3 cut(s) | 115, 130, 145 |
| MseI | TTAA | 1 cut(s) | 11 |
| MspR9I | CCNGG | 1 cut(s) | 17 |
| MvaI | CCWGG | 1 cut(s) | 17 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 94 |
| NdeII | GATC | 2 cut(s) | 76, 169 |
| NlaIII | CATG | 2 cut(s) | 170, 189 |
| NspV | TTCGAA | 1 cut(s) | 128 |
| PagI | TCATGA | 1 cut(s) | 185 |
| PfeI | GAWTC | 2 cut(s) | 125, 130 |
| PkrI | GCNGC | 1 cut(s) | 90 |
| PsiI | TTATAA | 1 cut(s) | 104 |
| Psp6I | CCWGG | 1 cut(s) | 15 |
| PspGI | CCWGG | 1 cut(s) | 15 |
| SaqAI | TTAA | 1 cut(s) | 11 |
| SatI | GCNGC | 1 cut(s) | 89 |
| Sau3AI | GATC | 2 cut(s) | 76, 169 |
| ScrFI | CCNGG | 1 cut(s) | 17 |
| SetI | ASST | 1 cut(s) | 18 |
| SfuI | TTCGAA | 1 cut(s) | 128 |
| Sse9I | AATT | 2 cut(s) | 8, 147 |
| SsiI | CCGC | 1 cut(s) | 89 |
| StyD4I | CCNGG | 1 cut(s) | 15 |
| TaqI | TCGA | 2 cut(s) | 128, 142 |
| TasI | AATT | 2 cut(s) | 8, 147 |
| TauI | GCSGC | 1 cut(s) | 91 |
| TfiI | GAWTC | 2 cut(s) | 125, 130 |
| Tru1I | TTAA | 1 cut(s) | 11 |
| Tru9I | TTAA | 1 cut(s) | 11 |
| TspDTI | ATGAA | 2 cut(s) | 57, 68 |
| XmiI | GTMKAC | 1 cut(s) | 22 |