Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0006541

Physical Location & Seq

Genomic Coordinates Forward (+)

33612080 .. 33614330

Gene Structure 2251 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0313800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGGTGCAATATAATTTCAAGAAGATGACTATTGTCCCCAGCGGGAAGGGCTTCATTGATATTATCCTATCTCGCACTCAGCGGCAGACCCCAACTGTAGTCCACAAGGGTTATGCCATTAACCGCCTGCGTCTGTTCTATATGCGCAAAGTAAAATACACCCAGACAGATTTTCATGAGAAGCTCTCTACTATCATTGATGAATTTCCTAGGCTGGATGACATCCATCCTTTCTATGGTGATCTTCTACATGTTGTCTACAACAAGGACCATTACAAGCTCGCACTGGATCAAATCGATACTGCAAGGAACCTTATTTCTGAGATTGCTATAGATTATGTCAAGTTATTGAAGTATGGCGATTCACTTTACCGATGCAAGAGTCTCAAGGTTGCTGCTCTTGGCCGTATGTGCACAGTTATAAAGAGGATTGGTCCGACTTTAGCTTATCTAGAACAAATTAGGCAACACATGGCAAGGCTACCTTCAATTGACCCAAACACCAGGACAATATTGATATGCGGCTATCCCAATGTCGGAAAGAGTTCATTCATCAACAAGATCACCAGGGCCGATGTGGATGTCCAGCCTTATGCTTTTACTACAAAGTCACTCTTTGTGGGGCATACAGATTATAAGTACCTGAGGTACCAGTTTATTGATACACCTGGGATTTTGGACCGACCATTTGAAGACTGTAACATTATTGAGATGTGCAGCATCACAGCATTGGCACATTTGAGAGCAGCTGTTTTGTTCTTCTTGGACATCTCAGGGTCTTGTGGTTATACCATTGCTCAACAAGCAGCCCTATTTCACAGCATTAAATCTCTGTTCATGAACAAACCATTAATTATAGTCTGCAACAAGACTGATTTGCAGCCATTGGAGGGCATATCTGAGGAAGACATGAAGTTGGTAACAGAGATGAAAGCTGAAGCTGTGAAGACTGTGATTGGTCAAGGAGGCGAGGCTACAAATGATGATGGAATACTCTTGACCATGAGCACTTTGACCGAGGAGGGGGTTATTTCCGTAAAGAATGCAGCTTGTGAGAGGTTATTGAATCAGAGAGTTGAGTTGAAGATGAAATCTATAAAGATAAATGATTGTTTAGATCGTTTTCATGTTGAGATCCCAAAGCCAGGTGACCAAAAGGAAAGGCCTCCATCTATGCCTCAGGCTGTTTTAGAAGCTAAGGCTAAGCCAGCAGCAGAGAAAGAAAAGAGAACTACTGAAAAGGATTTGGAGAATGAAAATGGTGGTGCTGGTGTATACTCTGCCAGTTTGAAGAAGAATTATATCCTTGCTCATGATGAGTGGAAAGAGGACATCATGCCTGAAATTCTTGATAAGCACAATGTATTTGACTTTGTTGATCCCGATATTTTGAATAGGCTTGAGGAGTTAGAACGAGAAGAAGGAATCAGGCAGGCAGAGGTGGATGATGATGTGGAGATGGGTGGAATGGAGTTGACTCCAGAAGAGCAGAAGACATTGGCTCAGATAAGGAAAAAGAAAAGCTTGCTGATTCAACAACATAGAATTAAGAAAATTACCGCGGAAAGTGGACCTACAGTACCTAGGATATTTGACAAGGACAGGGAGTTCACAACAAAGACAATGTGGAGGCAACTGTCAGAGTTGGGAATTGATCCTCGTAAGGCAACTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000152 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005680 GO:0006139 GO:0006351 GO:0006366 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009555 GO:0009791 GO:0009987 GO:0010152 GO:0010229 GO:0010467 GO:0016070 GO:0018130 GO:0019438 GO:0021700 GO:0022414 GO:0031461 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0048229 GO:0048367 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0061458 GO:0061614 GO:0071704 GO:0090304 GO:0090567 GO:0097659 GO:0099402 GO:1901360 GO:1901362 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04110 ko04114 ko04120 ko04914 map04110 map04114 map04120 map04914

Pfam Domains

Protein Families

Apc13p

Protein Analysis

558

Amino Acids

63.65

Weight (kDa)

7.19

Isoelectric Point (pI)

34.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NOG1_N	PF17835	6 - 165	1.8e-56	NOG1 N-terminal helical domain
FeoB_N	PF02421	170 - 319	8.3e-10	Ferrous iron transport protein B
MMR_HSR1	PF01926	171 - 290	3.1e-18	50S ribosome-binding GTPase
NOG1	PF06858	236 - 292	5.2e-25	Nucleolar GTP-binding protein 1 (NOG1)
NOGCT	PF08155	410 - 463	2.2e-24	NOGCT (NUC087) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0006541)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G73177
fragaria_vesca	FvH4_4g00490
malus_domestica	MD09G1239400.v1.1
prunus_persica	Prupe.3G122600_v2.0.a1 Prupe.3G122600_v2.0.a1 Prupe.3G122600_v2.0.a1 Prupe.3G122600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0385941 RchiOBHm_Chr4g0387841 RchiOBHm_Chr4g0387941
rosa_multiflora	Rmu_sc0002509.1_g000032
rosa_roxburghii	Rroxscaffold_5G00334450 Rroxscaffold_5G00334490
rosa_rugosa	Rorug03G0303500 Rorug03G0303600 Rorug03G0313700 Rorug03G0313800 Rorug03G0313900 Rorug03G0314000
rosa_samantha	Rh4AG007700 Rh4AG019000 Rh4BG005700 Rh4CG008500 Rh4DG007200
rosa_wichuraiana	Rw4G000290 Rw4G001240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	422, 636
Acc16I	TGCGCA	1 cut(s)	146
Acc65I	GGTACC	1 cut(s)	648
AccB1I	GGYRCC	1 cut(s)	648
AccI	GTMKAC	2 cut(s)	258, 1275
AccII	CGCG	1 cut(s)	1562
AciI	CCGC	6 cut(s)	42, 82, 124, 522, 1560, 1562
AclWI	GGATC	4 cut(s)	297, 1129, 1373, 1649
AcoI	YGGCCR	1 cut(s)	403
AcsI	RAATTY	2 cut(s)	203, 1344
AcuI	CTGAAG	1 cut(s)	957
AfaI	GTAC	3 cut(s)	641, 650, 1581
AfiI	CCNNNNNNNGG	5 cut(s)	236, 536, 890, 1023, 1145
AflIII	ACRYGT	1 cut(s)	250
AgsI	TTSAA	9 cut(s)	19, 352, 489, 692, 1066, 1084, 1291, 1393, 1535
AjnI	CCWGG	4 cut(s)	503, 566, 667, 1144
AloI	GAACNNNNNNTCC	2 cut(s)	1592, 1624
AluBI	AGCT	9 cut(s)	184, 280, 446, 749, 935, 941, 1049, 1196, 1524
AluI	AGCT	9 cut(s)	184, 280, 446, 749, 935, 941, 1049, 1196, 1524
Alw21I	GWGCWC	2 cut(s)	416, 1010
Alw26I	GTCTC	1 cut(s)	389
Alw44I	GTGCAC	1 cut(s)	412
AlwI	GGATC	4 cut(s)	297, 1129, 1373, 1649
AoxI	GGCC	3 cut(s)	403, 570, 1163
ApaLI	GTGCAC	1 cut(s)	412
ApeKI	GCWGC	7 cut(s)	395, 717, 746, 806, 880, 1046, 1211
ApoI	RAATTY	2 cut(s)	203, 1344
ArsI	GACNNNNNNTTYG	2 cut(s)	671, 703
AseI	ATTAAT	1 cut(s)	851
Asp700I	GAANNNNTTC	2 cut(s)	50, 544
Asp718I	GGTACC	1 cut(s)	648
AspA2I	CCTAGG	2 cut(s)	209, 1583
AspLEI	GCGC	1 cut(s)	147
AspS9I	GGNCC	5 cut(s)	268, 434, 570, 679, 1571
AsuHPI	GGTGA	3 cut(s)	251, 556, 1160
AvaII	GGWCC	4 cut(s)	268, 434, 679, 1571
AvrII	CCTAGG	2 cut(s)	209, 1583
AxyI	CCTNAGG	2 cut(s)	644, 1179
BaeGI	GKGCMC	1 cut(s)	416
BanI	GGYRCC	1 cut(s)	648
BbsI	GAAGAC	4 cut(s)	699, 912, 953, 1499
Bbv12I	GWGCWC	2 cut(s)	416, 1010
BbvI	GCAGC	7 cut(s)	382, 729, 758, 818, 892, 1058, 1223
BccI	CCATC	4 cut(s)	234, 980, 1177, 1453
BceAI	ACGGC	1 cut(s)	390
BciT130I	CCWGG	4 cut(s)	505, 568, 669, 1146
BcoDI	GTCTC	1 cut(s)	389
BfaI	CTAG	3 cut(s)	210, 452, 1584
BfmI	CTRYAG	3 cut(s)	96, 330, 1575
BisI	GCNGC	9 cut(s)	83, 396, 523, 718, 747, 807, 881, 1047, 1212
BlnI	CCTAGG	2 cut(s)	209, 1583
BlpI	GCTNAGC	1 cut(s)	1203
BlsI	GCNGC	9 cut(s)	84, 397, 524, 719, 748, 808, 882, 1048, 1213
Bme1390I	CCNGG	4 cut(s)	505, 568, 669, 1146
Bme18I	GGWCC	4 cut(s)	268, 434, 679, 1571
BmgT120I	GGNCC	5 cut(s)	268, 434, 570, 679, 1571
BmiI	GGNNCC	2 cut(s)	311, 650
BmrFI	CCNGG	4 cut(s)	505, 568, 669, 1146
BmsI	GCATC	2 cut(s)	365, 729
BoxI	GACNNNNGTC	1 cut(s)	32
BpiI	GAAGAC	4 cut(s)	699, 912, 953, 1499
BplI	GAGNNNNNCTC	2 cut(s)	170, 202
BpmI	CTGGAG	1 cut(s)	1464
Bpu10I	CCTNAGC	1 cut(s)	1197
Bpu1102I	GCTNAGC	1 cut(s)	1203
BpuEI	CTTGAG	2 cut(s)	371, 1421
Bsa29I	ATCGAT	1 cut(s)	297
BsaJI	CCNNGG	6 cut(s)	209, 567, 668, 1017, 1560, 1583
Bsc4I	CCNNNNNNNGG	5 cut(s)	236, 536, 890, 1023, 1145
Bse1I	ACTGG	3 cut(s)	291, 652, 1284
Bse21I	CCTNAGG	2 cut(s)	644, 1179
Bse3DI	GCAATG	1 cut(s)	792
BseBI	CCWGG	4 cut(s)	505, 568, 669, 1146
BseCI	ATCGAT	1 cut(s)	297
BseDI	CCNNGG	6 cut(s)	209, 567, 668, 1017, 1560, 1583
BseGI	GGATG	5 cut(s)	222, 223, 226, 586, 1450
BseLI	CCNNNNNNNGG	5 cut(s)	236, 536, 890, 1023, 1145
BseMI	GCAATG	1 cut(s)	792
BseMII	CTCAG	7 cut(s)	92, 312, 635, 786, 891, 1193, 1517
BseNI	ACTGG	3 cut(s)	291, 652, 1284
BseRI	GAGGAG	2 cut(s)	1034, 1418
BseSI	GKGCMC	1 cut(s)	416
BseXI	GCAGC	7 cut(s)	382, 729, 758, 818, 892, 1058, 1223
BseYI	CCCAGC	1 cut(s)	38
BsgI	GTGCAG	1 cut(s)	736
Bsh1236I	CGCG	1 cut(s)	1562
BshFI	GGCC	3 cut(s)	405, 572, 1165
BshNI	GGYRCC	1 cut(s)	648
BshVI	ATCGAT	1 cut(s)	297
BsiHKAI	GWGCWC	2 cut(s)	416, 1010
BslFI	GGGAC	1 cut(s)	20
BslI	CCNNNNNNNGG	5 cut(s)	236, 536, 890, 1023, 1145
BsmAI	GTCTC	1 cut(s)	389
BsmFI	GGGAC	1 cut(s)	20
BsmI	GAATGC	1 cut(s)	1048
BsnI	GGCC	3 cut(s)	405, 572, 1165
Bsp1286I	GDGCHC	2 cut(s)	416, 1010
Bsp143I	GATC	7 cut(s)	241, 289, 561, 1117, 1134, 1378, 1654
Bsp1720I	GCTNAGC	1 cut(s)	1203
BspACI	CCGC	6 cut(s)	42, 82, 124, 522, 1560, 1562
BspANI	GGCC	3 cut(s)	405, 572, 1165
BspCNI	CTCAG	7 cut(s)	91, 313, 636, 785, 892, 1192, 1516
BspDI	ATCGAT	1 cut(s)	297
BspFNI	CGCG	1 cut(s)	1562
BspHI	TCATGA	3 cut(s)	175, 837, 1312
BspLI	GGNNCC	2 cut(s)	311, 650
BspPI	GGATC	4 cut(s)	297, 1129, 1373, 1649
BspQI	GCTCTTC	1 cut(s)	1479
BspT107I	GGYRCC	1 cut(s)	648
BsrDI	GCAATG	1 cut(s)	792
BsrI	ACTGG	3 cut(s)	291, 652, 1284
BssECI	CCNNGG	6 cut(s)	209, 567, 668, 1017, 1560, 1583
BssMI	GATC	7 cut(s)	241, 289, 561, 1117, 1134, 1378, 1654
BssNAI	GTATAC	1 cut(s)	1276
BssT1I	CCWWGG	2 cut(s)	209, 1583
Bst1107I	GTATAC	1 cut(s)	1276
Bst2UI	CCWGG	4 cut(s)	505, 568, 669, 1146
Bst4CI	ACNGT	6 cut(s)	97, 418, 698, 952, 1579, 1638
Bst6I	CTCTTC	1 cut(s)	1479
BstC8I	GCNNGC	5 cut(s)	128, 282, 1209, 1434, 1526
BstDEI	CTNAG	9 cut(s)	78, 321, 644, 772, 900, 1179, 1197, 1203, 1503
BstDSI	CCRYGG	1 cut(s)	1560
BstEII	GGTNACC	1 cut(s)	1148
BstF5I	GGATG	5 cut(s)	222, 223, 226, 586, 1450
BstFNI	CGCG	1 cut(s)	1562
BstHHI	GCGC	1 cut(s)	147
BstKTI	GATC	7 cut(s)	244, 292, 564, 1120, 1137, 1381, 1657
BstMAI	GTCTC	1 cut(s)	389
BstMBI	GATC	7 cut(s)	241, 289, 561, 1117, 1134, 1378, 1654
BstMWI	GCNNNNNNNGC	4 cut(s)	48, 411, 803, 1208
BstNI	CCWGG	4 cut(s)	505, 568, 669, 1146
BstNSI	RCATGY	1 cut(s)	254
BstPAI	GACNNNNGTC	1 cut(s)	32
BstPI	GGTNACC	1 cut(s)	1148
BstSCI	CCNGG	4 cut(s)	503, 566, 667, 1144
BstSFI	CTRYAG	3 cut(s)	96, 330, 1575
BstSLI	GKGCMC	1 cut(s)	416
BstUI	CGCG	1 cut(s)	1562
BstV1I	GCAGC	7 cut(s)	382, 729, 758, 818, 892, 1058, 1223
BstV2I	GAAGAC	4 cut(s)	699, 912, 953, 1499
BstX2I	RGATCY	1 cut(s)	1134
BstYI	RGATCY	1 cut(s)	1134
BstZ17I	GTATAC	1 cut(s)	1276
Bsu15I	ATCGAT	1 cut(s)	297
Bsu36I	CCTNAGG	2 cut(s)	644, 1179
BsuRI	GGCC	3 cut(s)	405, 572, 1165
BsuTUI	ATCGAT	1 cut(s)	297
BtgI	CCRYGG	1 cut(s)	1560
BtsCI	GGATG	5 cut(s)	222, 223, 226, 586, 1450
BtsIMutI	CAGTG	1 cut(s)	284
Cac8I	GCNNGC	5 cut(s)	128, 282, 1209, 1434, 1526
CciI	TCATGA	3 cut(s)	175, 837, 1312
CfoI	GCGC	1 cut(s)	147
Cfr13I	GGNCC	5 cut(s)	268, 434, 570, 679, 1571
Cfr42I	CCGCGG	1 cut(s)	1563
ClaI	ATCGAT	1 cut(s)	297
CseI	GACGC	1 cut(s)	119
Csp6I	GTAC	3 cut(s)	640, 649, 1580
CviAII	CATG	9 cut(s)	176, 251, 472, 838, 910, 1003, 1127, 1313, 1336
CviQI	GTAC	3 cut(s)	640, 649, 1580
DdeI	CTNAG	9 cut(s)	78, 321, 644, 772, 900, 1179, 1197, 1203, 1503
DpnI	GATC	7 cut(s)	243, 291, 563, 1119, 1136, 1380, 1656
DpnII	GATC	7 cut(s)	241, 289, 561, 1117, 1134, 1378, 1654
EaeI	YGGCCR	1 cut(s)	403
Eam1104I	CTCTTC	1 cut(s)	1479
EarI	CTCTTC	1 cut(s)	1479
Eco130I	CCWWGG	2 cut(s)	209, 1583
Eco147I	AGGCCT	1 cut(s)	1165
Eco47I	GGWCC	4 cut(s)	268, 434, 679, 1571
Eco57I	CTGAAG	1 cut(s)	957
Eco81I	CCTNAGG	2 cut(s)	644, 1179
Eco91I	GGTNACC	1 cut(s)	1148
EcoO65I	GGTNACC	1 cut(s)	1148
EcoRII	CCWGG	4 cut(s)	503, 566, 667, 1144
EcoT14I	CCWWGG	2 cut(s)	209, 1583
ErhI	CCWWGG	2 cut(s)	209, 1583
FaeI	CATG	9 cut(s)	179, 254, 475, 841, 913, 1006, 1130, 1316, 1339
FalI	AAGNNNNNCTT	6 cut(s)	469, 501, 599, 631, 1508, 1540
FaqI	GGGAC	1 cut(s)	20
FatI	CATG	9 cut(s)	175, 250, 471, 837, 909, 1002, 1126, 1312, 1335
FauI	CCCGC	1 cut(s)	35
FblI	GTMKAC	2 cut(s)	258, 1275
Fnu4HI	GCNGC	9 cut(s)	83, 396, 523, 718, 747, 807, 881, 1047, 1212
FokI	GGATG	5 cut(s)	209, 213, 230, 593, 1457
Fsp4HI	GCNGC	9 cut(s)	83, 396, 523, 718, 747, 807, 881, 1047, 1212
FspBI	CTAG	3 cut(s)	210, 452, 1584
FspI	TGCGCA	1 cut(s)	146
GlaI	GCGC	1 cut(s)	146
GluI	GCNGC	9 cut(s)	83, 396, 523, 718, 747, 807, 881, 1047, 1212
GsaI	CCCAGC	1 cut(s)	42
GsuI	CTGGAG	1 cut(s)	1464
HaeIII	GGCC	3 cut(s)	405, 572, 1165
HgaI	GACGC	1 cut(s)	119
HhaI	GCGC	1 cut(s)	147
Hin1II	CATG	9 cut(s)	179, 254, 475, 841, 913, 1006, 1130, 1316, 1339
Hin6I	GCGC	1 cut(s)	145
HinP1I	GCGC	1 cut(s)	145
HincII	GTYRAC	1 cut(s)	1476
HindII	GTYRAC	1 cut(s)	1476
HindIII	AAGCTT	1 cut(s)	1522
HinfI	GANTC	6 cut(s)	362, 382, 1066, 1425, 1477, 1531
HphI	GGTGA	3 cut(s)	251, 556, 1160
Hpy166II	GTNNAC	7 cut(s)	103, 259, 414, 1276, 1476, 1571, 1611
Hpy188I	TCNGA	7 cut(s)	322, 438, 539, 901, 1071, 1506, 1642
Hpy188III	TCNNGA	9 cut(s)	19, 176, 452, 838, 997, 1313, 1349, 1382, 1481
Hpy8I	GTNNAC	7 cut(s)	103, 259, 414, 1276, 1476, 1571, 1611
HpyAV	CCTTC	3 cut(s)	40, 495, 1415
HpyCH4III	ACNGT	6 cut(s)	97, 418, 698, 952, 1579, 1638
HpyCH4V	TGCA	8 cut(s)	7, 305, 378, 414, 717, 864, 880, 1046
HpyF10VI	GCNNNNNNNGC	4 cut(s)	48, 411, 803, 1208
HpyF3I	CTNAG	9 cut(s)	78, 321, 644, 772, 900, 1179, 1197, 1203, 1503
Hsp92II	CATG	9 cut(s)	179, 254, 475, 841, 913, 1006, 1130, 1316, 1339
HspAI	GCGC	1 cut(s)	145
KpnI	GGTACC	1 cut(s)	652
KspI	CCGCGG	1 cut(s)	1563
Kzo9I	GATC	7 cut(s)	241, 289, 561, 1117, 1134, 1378, 1654
LguI	GCTCTTC	1 cut(s)	1479
Lsp1109I	GCAGC	7 cut(s)	382, 729, 758, 818, 892, 1058, 1223
LweI	GCATC	2 cut(s)	365, 729
MaeI	CTAG	3 cut(s)	210, 452, 1584
MaeIII	GTNAC	4 cut(s)	609, 698, 919, 1148
MalI	GATC	7 cut(s)	243, 291, 563, 1119, 1136, 1380, 1656
MboI	GATC	7 cut(s)	241, 289, 561, 1117, 1134, 1378, 1654
MfeI	CAATTG	1 cut(s)	489
MflI	RGATCY	1 cut(s)	1134
MhlI	GDGCHC	2 cut(s)	416, 1010
MlyI	GAGTC	2 cut(s)	391, 1471
MmeI	TCCRAC	2 cut(s)	461, 517
MroXI	GAANNNNTTC	2 cut(s)	50, 544
MseI	TTAA	4 cut(s)	120, 825, 851, 1548
MspA1I	CMGCKG	4 cut(s)	42, 82, 749, 1562
MspR9I	CCNGG	4 cut(s)	505, 568, 669, 1146
MunI	CAATTG	1 cut(s)	489
Mva1269I	GAATGC	1 cut(s)	1048
MvaI	CCWGG	4 cut(s)	505, 568, 669, 1146
MvnI	CGCG	1 cut(s)	1562
MwoI	GCNNNNNNNGC	4 cut(s)	48, 411, 803, 1208
NdeII	GATC	7 cut(s)	241, 289, 561, 1117, 1134, 1378, 1654
NlaIII	CATG	9 cut(s)	179, 254, 475, 841, 913, 1006, 1130, 1316, 1339
NlaIV	GGNNCC	2 cut(s)	311, 650
NmuCI	GTSAC	2 cut(s)	609, 1148
NsbI	TGCGCA	1 cut(s)	146
NspI	RCATGY	1 cut(s)	254
PagI	TCATGA	3 cut(s)	175, 837, 1312
PceI	AGGCCT	1 cut(s)	1165
PciI	ACATGT	1 cut(s)	250
PciSI	GCTCTTC	1 cut(s)	1479
PctI	GAATGC	1 cut(s)	1048
PdmI	GAANNNNTTC	2 cut(s)	50, 544
PfeI	GAWTC	4 cut(s)	362, 1066, 1425, 1531
PkrI	GCNGC	9 cut(s)	84, 397, 524, 719, 748, 808, 882, 1048, 1213
PleI	GAGTC	2 cut(s)	390, 1471
PpsI	GAGTC	2 cut(s)	390, 1471
PscI	ACATGT	1 cut(s)	250
PshAI	GACNNNNGTC	1 cut(s)	32
PshBI	ATTAAT	1 cut(s)	851
PsiI	TTATAA	2 cut(s)	422, 636
Psp6I	CCWGG	4 cut(s)	503, 566, 667, 1144
PspEI	GGTNACC	1 cut(s)	1148
PspFI	CCCAGC	1 cut(s)	38
PspGI	CCWGG	4 cut(s)	503, 566, 667, 1144
PspN4I	GGNNCC	2 cut(s)	311, 650
PspPI	GGNCC	5 cut(s)	268, 434, 570, 679, 1571
PsuI	RGATCY	1 cut(s)	1134
PvuII	CAGCTG	1 cut(s)	749
RsaI	GTAC	3 cut(s)	641, 650, 1581
RsaNI	GTAC	3 cut(s)	640, 649, 1580
SacII	CCGCGG	1 cut(s)	1563
SapI	GCTCTTC	1 cut(s)	1479
SaqAI	TTAA	4 cut(s)	120, 825, 851, 1548
SatI	GCNGC	9 cut(s)	83, 396, 523, 718, 747, 807, 881, 1047, 1212
Sau3AI	GATC	7 cut(s)	241, 289, 561, 1117, 1134, 1378, 1654
Sau96I	GGNCC	5 cut(s)	268, 434, 570, 679, 1571
SchI	GAGTC	2 cut(s)	391, 1471
ScrFI	CCNGG	4 cut(s)	505, 568, 669, 1146
SduI	GDGCHC	2 cut(s)	416, 1010
SfaNI	GCATC	2 cut(s)	365, 729
SfcI	CTRYAG	3 cut(s)	96, 330, 1575
Sfr303I	CCGCGG	1 cut(s)	1563
SgrBI	CCGCGG	1 cut(s)	1563
SinI	GGWCC	4 cut(s)	268, 434, 679, 1571
SmlI	CTYRAG	2 cut(s)	386, 1400
SmoI	CTYRAG	2 cut(s)	386, 1400
SseBI	AGGCCT	1 cut(s)	1165
SsiI	CCGC	6 cut(s)	42, 82, 124, 522, 1560, 1562
SspI	AATATT	1 cut(s)	513
SspMI	CTAG	3 cut(s)	210, 452, 1584
StuI	AGGCCT	1 cut(s)	1165
StyD4I	CCNGG	4 cut(s)	503, 566, 667, 1144
StyI	CCWWGG	2 cut(s)	209, 1583
TaaI	ACNGT	6 cut(s)	97, 418, 698, 952, 1579, 1638
TaqI	TCGA	1 cut(s)	297
TaqII	GACCGA	2 cut(s)	696, 1031
TauI	GCSGC	2 cut(s)	85, 525
TfiI	GAWTC	4 cut(s)	362, 1066, 1425, 1531
Tru1I	TTAA	4 cut(s)	120, 825, 851, 1548
Tru9I	TTAA	4 cut(s)	120, 825, 851, 1548
TscAI	CASTG	1 cut(s)	291
TseFI	GTSAC	2 cut(s)	609, 1148
TseI	GCWGC	7 cut(s)	395, 717, 746, 806, 880, 1046, 1211
Tsp45I	GTSAC	2 cut(s)	609, 1148
TspGWI	ACGGA	1 cut(s)	1024
TspRI	CASTG	1 cut(s)	291
VneI	GTGCAC	1 cut(s)	412
VpaK11BI	GGWCC	4 cut(s)	268, 434, 679, 1571
VspI	ATTAAT	1 cut(s)	851
XapI	RAATTY	2 cut(s)	203, 1344
XbaI	TCTAGA	1 cut(s)	451
XceI	RCATGY	1 cut(s)	254
XcmI	CCANNNNNNNNNTGG	2 cut(s)	233, 574
XmaJI	CCTAGG	2 cut(s)	209, 1583
XmiI	GTMKAC	2 cut(s)	258, 1275
XmnI	GAANNNNTTC	2 cut(s)	50, 544
XspI	CTAG	3 cut(s)	210, 452, 1584

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.