Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0012768

Physical Location & Seq

Genomic Coordinates Reverse (-)

1763874 .. 1767535

Gene Structure 3662 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g01980.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGACTACGCAAGCGCCGGAGACGTCGTCGAAGCAAACCAGTGTTCATGATCATGATCATGTTCAAGTTACTACTGCTACTACTACTAAGAGAGTGCTTCCGAACTTTCTTCTATCAGTGAGGCTCAAGTACGTGAAGCTTGGATATCACTACCTCATCTCCAACGCCATGTACATCTTACTCGTCCCGCTTCTCATGGTGGCTTTTGCTCATCTCTCAACCCTAACCGTGGAGGACTTGGCTAATTTATGGGACCAGCTCAAGTTCAACTTCGTCTCCGTCACCGTCTGCTCCGGCCTCATAGTCTTCTTGACCACCGTCTACTTCACCACCCGGCCGAGGAAAGTGTACCTGGTAAACTTTTCATGCTACAAACCTGAGGACGAGCGCATGTGCACTCGGGAGATCTTCATGCACAGGTCCAAGCTCACGGGGAGCTTCTCCGACGACAACCTAGCGTTCCAGAAAAAGATTCTGGAACGCTCCGGCCTTGGGCAGAACACGTACATGCCCGAGGCCGTGCTGAGGGTTCCGCCGAACCCGTGTATGGCGGAGGCCAGGAAGGAGGCGGAGATGGTCATGTTTGGGGCGATTGATGAGCTGCTGGAGAAGACGGGAGTGAAGCCTAAGGATATTGGGATTCTGGTAGTGAATTGCAGCTTGTTCAATCCGACGCCGTCTCTGTCCTCCATGGTTGTGAATCATTACAAGCTAAGAGGGAACATTGTGAGCTACAATCTTGGCGGGATGGGTTGCAGTGCTGGCCTCATTTCCATTGATCTTGCCAAGCAGCTTCTGCAGGTGCACCCTAACTCATATGCCCTAGTGGTCAGCATGGAGAACATAACCCTCAATTGGTACTTTGGCAATGATCGCTCTATGCTCCTCTCCAACTGCCTCTTCCGGTTGGGCGGTGCTGCCATCCTCCTCTCCAATCGCTCATCTGACCGCCGCCGCTCCAAGTACCAACTCATGCACACTGTCCGAACCCACAAGGGCTCAGACGACAGGGCGTACAACTGTGTTTTCCAAAAGGAGGATGACACCAAAAGAATTGGTGTCGCCCTCTCAAAAGACCTAATGGCCGTAGCCGGAGAGGCCCTCAAAACGAACATCACTACACTCGGCCCTATTGTCCTACCCATGTCAGAACAGCTCCTGTTTTTCGCTACTCTAGTGGCAAGAAAGGTGTTCAAGATGAAGAAGATCAAGCCCTACATCCCTGATTTCAAGCTGGCATTCGAGCATTTCTGTATCCATGCCGGTGGGAGAGCAGTGTTGGATGAGATGGAGAAGAACCTTGAGCTCAGCGATTGGCACATGGAGCCTTCAAGAATGACACTAAACAGGTTTGGAAACACTTCTAGCAGTTCATTGTGGTATGAACTGGCTTACTCTGAGGCTAAGGGAAGAGTGAGGAAGGGTGATAGGATGTGGCAGATTGCATTCGGGTCAGGATTCAAGTGTAACAGTGCTGTGTGGAGGGCCTTGAAGACTGTTAATCCAGCAAAGGAGAAGAATCCCTGGATTGATGAGATTCATTTGTTTCCTGTTGAGGTGCCTAAAGTTGCAGCCATCAAAACTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004312 GO:0006725 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009611 GO:0009628 GO:0009698 GO:0009699 GO:0009922 GO:0009987 GO:0010345 GO:0016740 GO:0016746 GO:0016747 GO:0019438 GO:0019748 GO:0044237 GO:0044249 GO:0044550 GO:0050896 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00062 ko01110 map00062 map01110

Pfam Domains

Protein Families

ACP_syn_III_C FAE1_CUT1_RppA

Protein Analysis

530

Amino Acids

59.74

Weight (kDa)

9.31

Isoelectric Point (pI)

36.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAE1_CUT1_RppA	PF08392	108 - 397	7.8e-145	FAE1/Type III polyketide synthase-like protein
ACP_syn_III_C	PF08541	415 - 495	1.3e-10	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Chal_sti_synt_C	PF02797	417 - 495	2.5e-08	Chalcone and stilbene synthases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012768)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04220 AT5G43760
fragaria_vesca	FvH4_4g01980 FvH4_7g17470
malus_domestica	MD13G1203100.v1.1
prunus_persica	Prupe.1G025600_v2.0.a1
pyrus_communis	pycom07g15420 pycom13g17640 pycom16g17200
rosa_chinensis	RchiOBHm_Chr4g0388941
rosa_laevigata	RLG00000010005
rosa_multiflora	Rmu_sc0005486.1_g000002
rosa_roxburghii	Rroxscaffold_5G00335260
rosa_rugosa	Rorug03G0321500
rosa_samantha	Rh4AG025900 Rh4BG019200 Rh4DG019700
rosa_wichuraiana	Rw4G001870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	790
AatII	GACGTC	1 cut(s)	26
Acc36I	ACCTGC	1 cut(s)	790
AccB1I	GGYRCC	1 cut(s)	1558
AccBSI	CCGCTC	1 cut(s)	957
AccI	GTMKAC	1 cut(s)	321
AciI	CCGC	9 cut(s)	188, 533, 551, 569, 744, 912, 949, 952, 955
AcoI	YGGCCR	2 cut(s)	335, 1083
AcyI	GRCGYC	2 cut(s)	23, 674
AfaI	GTAC	7 cut(s)	131, 173, 350, 506, 860, 965, 1016
AfiI	CCNNNNNNNGG	7 cut(s)	229, 339, 492, 525, 547, 855, 1036
AflIII	ACRYGT	1 cut(s)	501
AgsI	TTSAA	8 cut(s)	65, 268, 667, 1195, 1231, 1332, 1462, 1492
AjnI	CCWGG	3 cut(s)	351, 557, 1523
AjuI	GAANNNNNNNTTGG	2 cut(s)	884, 916
Alw21I	GWGCWC	3 cut(s)	398, 807, 1308
Alw26I	GTCTC	3 cut(s)	14, 280, 684
Alw44I	GTGCAC	2 cut(s)	394, 803
AlwNI	CAGNNNCTG	2 cut(s)	796, 1159
Ama87I	CYCGRG	2 cut(s)	399, 512
ApaLI	GTGCAC	2 cut(s)	394, 803
ApeKI	GCWGC	5 cut(s)	601, 657, 790, 917, 1571
Asp700I	GAANNNNTTC	1 cut(s)	1360
AspLEI	GCGC	2 cut(s)	16, 390
AspS9I	GGNCC	5 cut(s)	253, 420, 1099, 1127, 1485
AsuC2I	CCSGG	1 cut(s)	334
AsuHPI	GGTGA	3 cut(s)	274, 319, 1436
AvaI	CYCGRG	2 cut(s)	399, 512
AvaII	GGWCC	2 cut(s)	253, 420
AxyI	CCTNAGG	2 cut(s)	378, 627
BaeGI	GKGCMC	2 cut(s)	398, 807
BanI	GGYRCC	1 cut(s)	1558
BanII	GRGCYC	2 cut(s)	1001, 1308
BbsI	GAAGAC	3 cut(s)	298, 617, 1499
Bbv12I	GWGCWC	3 cut(s)	398, 807, 1308
BbvCI	CCTCAGC	1 cut(s)	524
BbvI	GCAGC	5 cut(s)	588, 669, 802, 904, 1583
BccI	CCATC	5 cut(s)	568, 742, 929, 1282, 1583
BceAI	ACGGC	3 cut(s)	503, 661, 1070
BciT130I	CCWGG	3 cut(s)	353, 559, 1525
BciVI	GTATCC	1 cut(s)	1265
BclI	TGATCA	2 cut(s)	49, 55
BcnI	CCSGG	1 cut(s)	334
BcoDI	GTCTC	3 cut(s)	14, 280, 684
BfaI	CTAG	4 cut(s)	455, 824, 1175, 1365
BfmI	CTRYAG	1 cut(s)	797
BfoI	RGCGCY	1 cut(s)	17
BfuAI	ACCTGC	1 cut(s)	790
BfuI	GTATCC	1 cut(s)	1265
BglI	GCCNNNNNGGC	1 cut(s)	1097
BglII	AGATCT	1 cut(s)	405
BisI	GCNGC	7 cut(s)	602, 658, 791, 918, 952, 955, 1572
BlpI	GCTNAGC	1 cut(s)	1307
BlsI	GCNGC	7 cut(s)	603, 659, 792, 919, 953, 956, 1573
Bme1390I	CCNGG	4 cut(s)	334, 353, 559, 1525
Bme18I	GGWCC	2 cut(s)	253, 420
BmeT110I	CYCGRG	2 cut(s)	399, 512
BmgT120I	GGNCC	5 cut(s)	253, 420, 1099, 1127, 1485
BmiI	GGNNCC	4 cut(s)	254, 531, 1326, 1560
BmrFI	CCNGG	4 cut(s)	334, 353, 559, 1525
BoxI	GACNNNNGTC	1 cut(s)	317
BpiI	GAAGAC	3 cut(s)	298, 617, 1499
BplI	GAGNNNNNCTC	2 cut(s)	1086, 1118
BpmI	CTGGAG	1 cut(s)	626
Bpu10I	CCTNAGC	2 cut(s)	524, 1404
Bpu1102I	GCTNAGC	1 cut(s)	1307
BpuEI	CTTGAG	3 cut(s)	110, 245, 1322
BpuMI	CCSGG	1 cut(s)	334
BsaAI	YACGTR	2 cut(s)	133, 504
BsaBI	GATNNNNATC	1 cut(s)	54
BsaHI	GRCGYC	2 cut(s)	23, 674
BsaJI	CCNNGG	6 cut(s)	228, 338, 490, 513, 690, 1523
BsaWI	WCCGGW	1 cut(s)	903
BsaXI	ACNNNNNCTCC	6 cut(s)	11, 41, 143, 173, 260, 290
Bsc4I	CCNNNNNNNGG	7 cut(s)	229, 339, 492, 525, 547, 855, 1036
Bse118I	RCCGGY	1 cut(s)	1262
Bse1I	ACTGG	2 cut(s)	39, 1392
Bse21I	CCTNAGG	2 cut(s)	378, 627
Bse3DI	GCAATG	1 cut(s)	874
Bse8I	GATNNNNATC	1 cut(s)	54
BseBI	CCWGG	3 cut(s)	353, 559, 1525
BseDI	CCNNGG	6 cut(s)	228, 338, 490, 513, 690, 1523
BseGI	GGATG	6 cut(s)	753, 921, 1045, 1218, 1288, 1437
BseJI	GATNNNNATC	1 cut(s)	54
BseLI	CCNNNNNNNGG	7 cut(s)	229, 339, 492, 525, 547, 855, 1036
BseMI	GCAATG	1 cut(s)	874
BseMII	CTCAG	5 cut(s)	369, 515, 1014, 1321, 1389
BseNI	ACTGG	2 cut(s)	39, 1392
BseRI	GAGGAG	2 cut(s)	875, 917
BseSI	GKGCMC	2 cut(s)	398, 807
BseX3I	CGGCCG	1 cut(s)	335
BseXI	GCAGC	5 cut(s)	588, 669, 802, 904, 1583
Bsh1285I	CGRYCG	1 cut(s)	338
BshNI	GGYRCC	1 cut(s)	1558
BsiEI	CGRYCG	1 cut(s)	338
BsiHKAI	GWGCWC	3 cut(s)	398, 807, 1308
BsiHKCI	CYCGRG	2 cut(s)	399, 512
BsiSI	CCGG	7 cut(s)	17, 294, 334, 486, 904, 1092, 1263
BslFI	GGGAC	2 cut(s)	170, 266
BslI	CCNNNNNNNGG	7 cut(s)	229, 339, 492, 525, 547, 855, 1036
BsmAI	GTCTC	3 cut(s)	14, 280, 684
BsmBI	CGTCTC	3 cut(s)	14, 280, 684
BsmFI	GGGAC	2 cut(s)	170, 266
BsmI	GAATGC	2 cut(s)	1238, 1445
BsoBI	CYCGRG	2 cut(s)	399, 512
Bsp1286I	GDGCHC	4 cut(s)	398, 807, 1001, 1308
Bsp1407I	TGTACA	1 cut(s)	171
Bsp143I	GATC	6 cut(s)	49, 55, 405, 778, 871, 1206
Bsp1720I	GCTNAGC	1 cut(s)	1307
Bsp19I	CCATGG	1 cut(s)	690
BspACI	CCGC	9 cut(s)	188, 533, 551, 569, 744, 912, 949, 952, 955
BspCNI	CTCAG	5 cut(s)	370, 516, 1013, 1320, 1390
BspHI	TCATGA	2 cut(s)	46, 52
BspLI	GGNNCC	4 cut(s)	254, 531, 1326, 1560
BspMAI	CTGCAG	1 cut(s)	801
BspMI	ACCTGC	1 cut(s)	790
BspT107I	GGYRCC	1 cut(s)	1558
BsrBI	CCGCTC	1 cut(s)	957
BsrDI	GCAATG	1 cut(s)	874
BsrFI	RCCGGY	1 cut(s)	1262
BsrGI	TGTACA	1 cut(s)	171
BsrI	ACTGG	2 cut(s)	39, 1392
BssAI	RCCGGY	1 cut(s)	1262
BssECI	CCNNGG	6 cut(s)	228, 338, 490, 513, 690, 1523
BssMI	GATC	6 cut(s)	49, 55, 405, 778, 871, 1206
BssNI	GRCGYC	2 cut(s)	23, 674
BssT1I	CCWWGG	2 cut(s)	490, 690
Bst2UI	CCWGG	3 cut(s)	353, 559, 1525
Bst4CI	ACNGT	7 cut(s)	229, 286, 319, 982, 1022, 1472, 1498
Bst6I	CTCTTC	2 cut(s)	905, 1405
BstACI	GRCGYC	2 cut(s)	23, 674
BstAPI	GCANNNNNTGC	1 cut(s)	796
BstAUI	TGTACA	1 cut(s)	171
BstBAI	YACGTR	2 cut(s)	133, 504
BstC8I	GCNNGC	3 cut(s)	12, 763, 1236
BstDSI	CCRYGG	2 cut(s)	228, 690
BstF5I	GGATG	6 cut(s)	753, 921, 1045, 1218, 1288, 1437
BstH2I	RGCGCY	1 cut(s)	17
BstHHI	GCGC	2 cut(s)	16, 390
BstKTI	GATC	6 cut(s)	52, 58, 408, 781, 874, 1209
BstMAI	GTCTC	3 cut(s)	14, 280, 684
BstMBI	GATC	6 cut(s)	49, 55, 405, 778, 871, 1206
BstMCI	CGRYCG	1 cut(s)	338
BstMWI	GCNNNNNNNGC	5 cut(s)	762, 796, 873, 1097, 1324
BstNI	CCWGG	3 cut(s)	353, 559, 1525
BstNSI	RCATGY	2 cut(s)	394, 511
BstPAI	GACNNNNGTC	1 cut(s)	317
BstSCI	CCNGG	4 cut(s)	332, 351, 557, 1523
BstSFI	CTRYAG	1 cut(s)	797
BstSLI	GKGCMC	2 cut(s)	398, 807
BstV1I	GCAGC	5 cut(s)	588, 669, 802, 904, 1583
BstV2I	GAAGAC	3 cut(s)	298, 617, 1499
BstX2I	RGATCY	1 cut(s)	405
BstXI	CCANNNNNNTGG	1 cut(s)	1265
BstYI	RGATCY	1 cut(s)	405
BstZI	CGGCCG	1 cut(s)	335
Bsu36I	CCTNAGG	2 cut(s)	378, 627
BsuI	GTATCC	1 cut(s)	1265
BtgI	CCRYGG	2 cut(s)	228, 690
BtsCI	GGATG	6 cut(s)	753, 921, 1045, 1218, 1288, 1437
BtsI	GCAGTG	2 cut(s)	763, 1281
BtsIMutI	CAGTG	6 cut(s)	46, 123, 763, 978, 1281, 1477
BveI	ACCTGC	1 cut(s)	790
Cac8I	GCNNGC	3 cut(s)	12, 763, 1236
CaiI	CAGNNNCTG	2 cut(s)	796, 1159
CciI	TCATGA	2 cut(s)	46, 52
CfoI	GCGC	2 cut(s)	16, 390
Cfr10I	RCCGGY	1 cut(s)	1262
Cfr13I	GGNCC	5 cut(s)	253, 420, 1099, 1127, 1485
CseI	GACGC	1 cut(s)	682
CsiI	ACCWGGT	1 cut(s)	351
Csp6I	GTAC	7 cut(s)	130, 172, 349, 505, 859, 964, 1015
CviQI	GTAC	7 cut(s)	130, 172, 349, 505, 859, 964, 1015
DpnI	GATC	6 cut(s)	51, 57, 407, 780, 873, 1208
DpnII	GATC	6 cut(s)	49, 55, 405, 778, 871, 1206
EaeI	YGGCCR	2 cut(s)	335, 1083
EagI	CGGCCG	1 cut(s)	335
Eam1104I	CTCTTC	2 cut(s)	905, 1405
EarI	CTCTTC	2 cut(s)	905, 1405
EciI	GGCGGA	3 cut(s)	522, 566, 584
Ecl136II	GAGCTC	1 cut(s)	1306
EclXI	CGGCCG	1 cut(s)	335
Eco130I	CCWWGG	2 cut(s)	490, 690
Eco24I	GRGCYC	2 cut(s)	1001, 1308
Eco32I	GATATC	1 cut(s)	146
Eco47I	GGWCC	2 cut(s)	253, 420
Eco52I	CGGCCG	1 cut(s)	335
Eco53kI	GAGCTC	1 cut(s)	1306
Eco81I	CCTNAGG	2 cut(s)	378, 627
Eco88I	CYCGRG	2 cut(s)	399, 512
EcoICRI	GAGCTC	1 cut(s)	1306
EcoO109I	RGGNCCY	2 cut(s)	1099, 1485
EcoRII	CCWGG	3 cut(s)	351, 557, 1523
EcoRV	GATATC	1 cut(s)	146
EcoT14I	CCWWGG	2 cut(s)	490, 690
EcoT38I	GRGCYC	2 cut(s)	1001, 1308
ErhI	CCWWGG	2 cut(s)	490, 690
Esp3I	CGTCTC	3 cut(s)	14, 280, 684
FalI	AAGNNNNNCTT	2 cut(s)	254, 286
FaqI	GGGAC	2 cut(s)	170, 266
FauI	CCCGC	2 cut(s)	195, 737
FauNDI	CATATG	1 cut(s)	817
FbaI	TGATCA	2 cut(s)	49, 55
FblI	GTMKAC	1 cut(s)	321
Fnu4HI	GCNGC	7 cut(s)	602, 658, 791, 918, 952, 955, 1572
FokI	GGATG	6 cut(s)	760, 908, 1052, 1205, 1295, 1444
FriOI	GRGCYC	2 cut(s)	1001, 1308
Fsp4HI	GCNGC	7 cut(s)	602, 658, 791, 918, 952, 955, 1572
FspBI	CTAG	4 cut(s)	455, 824, 1175, 1365
GlaI	GCGC	2 cut(s)	15, 389
GluI	GCNGC	7 cut(s)	602, 658, 791, 918, 952, 955, 1572
GsuI	CTGGAG	1 cut(s)	626
HaeII	RGCGCY	1 cut(s)	17
HapII	CCGG	7 cut(s)	17, 294, 334, 486, 904, 1092, 1263
HgaI	GACGC	1 cut(s)	682
HhaI	GCGC	2 cut(s)	16, 390
Hin1I	GRCGYC	2 cut(s)	23, 674
Hin6I	GCGC	2 cut(s)	14, 388
HinP1I	GCGC	2 cut(s)	14, 388
HindIII	AAGCTT	1 cut(s)	137
HinfI	GANTC	6 cut(s)	472, 640, 700, 1458, 1519, 1537
HpaII	CCGG	7 cut(s)	17, 294, 334, 486, 904, 1092, 1263
HphI	GGTGA	3 cut(s)	274, 319, 1436
Hpy166II	GTNNAC	5 cut(s)	322, 349, 358, 396, 805
Hpy188I	TCNGA	8 cut(s)	102, 445, 672, 946, 986, 1003, 1150, 1399
Hpy188III	TCNNGA	9 cut(s)	47, 53, 310, 401, 463, 476, 1195, 1332, 1455
Hpy8I	GTNNAC	5 cut(s)	322, 349, 358, 396, 805
Hpy99I	CGWCG	4 cut(s)	28, 31, 449, 676
HpyAV	CCTTC	3 cut(s)	556, 1338, 1414
HpyCH4III	ACNGT	7 cut(s)	229, 286, 319, 982, 1022, 1472, 1498
HpyCH4IV	ACGT	3 cut(s)	23, 132, 503
HpyCH4V	TGCA	9 cut(s)	396, 415, 657, 756, 799, 805, 976, 1445, 1571
HpyF10VI	GCNNNNNNNGC	5 cut(s)	762, 796, 873, 1097, 1324
HpySE526I	ACGT	3 cut(s)	23, 132, 503
Hsp92I	GRCGYC	2 cut(s)	23, 674
HspAI	GCGC	2 cut(s)	14, 388
Ksp22I	TGATCA	2 cut(s)	49, 55
Kzo9I	GATC	6 cut(s)	49, 55, 405, 778, 871, 1206
LmnI	GCTCC	7 cut(s)	296, 435, 488, 888, 962, 1161, 1324
Lsp1109I	GCAGC	5 cut(s)	588, 669, 802, 904, 1583
MabI	ACCWGGT	1 cut(s)	351
MaeI	CTAG	4 cut(s)	455, 824, 1175, 1365
MaeII	ACGT	3 cut(s)	23, 132, 503
MaeIII	GTNAC	3 cut(s)	67, 280, 1466
MalI	GATC	6 cut(s)	51, 57, 407, 780, 873, 1208
MbiI	CCGCTC	1 cut(s)	957
MboI	GATC	6 cut(s)	49, 55, 405, 778, 871, 1206
MfeI	CAATTG	1 cut(s)	853
MflI	RGATCY	1 cut(s)	405
MhlI	GDGCHC	4 cut(s)	398, 807, 1001, 1308
MluCI	AATT	4 cut(s)	244, 652, 853, 1053
MmeI	TCCRAC	5 cut(s)	186, 468, 695, 915, 1260
MroXI	GAANNNNTTC	1 cut(s)	1360
MseI	TTAA	1 cut(s)	1500
MslI	CAYNNNNRTG	5 cut(s)	51, 57, 506, 695, 1263
MspI	CCGG	7 cut(s)	17, 294, 334, 486, 904, 1092, 1263
MspR9I	CCNGG	4 cut(s)	334, 353, 559, 1525
MunI	CAATTG	1 cut(s)	853
Mva1269I	GAATGC	2 cut(s)	1238, 1445
MvaI	CCWGG	3 cut(s)	353, 559, 1525
MwoI	GCNNNNNNNGC	5 cut(s)	762, 796, 873, 1097, 1324
NciI	CCSGG	1 cut(s)	334
NcoI	CCATGG	1 cut(s)	690
NdeI	CATATG	1 cut(s)	817
NdeII	GATC	6 cut(s)	49, 55, 405, 778, 871, 1206
NlaIV	GGNNCC	4 cut(s)	254, 531, 1326, 1560
NmeAIII	GCCGAG	2 cut(s)	363, 1104
NmuCI	GTSAC	1 cut(s)	280
NspI	RCATGY	2 cut(s)	394, 511
PagI	TCATGA	2 cut(s)	46, 52
PaqCI	CACCTGC	1 cut(s)	790
PctI	GAATGC	2 cut(s)	1238, 1445
PdmI	GAANNNNTTC	1 cut(s)	1360
PfeI	GAWTC	6 cut(s)	472, 640, 700, 1458, 1519, 1537
PflFI	GACNNNGTC	2 cut(s)	25, 676
PkrI	GCNGC	7 cut(s)	603, 659, 792, 919, 953, 956, 1573
Ppu21I	YACGTR	2 cut(s)	133, 504
PshAI	GACNNNNGTC	1 cut(s)	317
Psp124BI	GAGCTC	1 cut(s)	1308
Psp6I	CCWGG	3 cut(s)	351, 557, 1523
PspGI	CCWGG	3 cut(s)	351, 557, 1523
PspN4I	GGNNCC	4 cut(s)	254, 531, 1326, 1560
PspPI	GGNCC	5 cut(s)	253, 420, 1099, 1127, 1485
PstI	CTGCAG	1 cut(s)	801
PstNI	CAGNNNCTG	2 cut(s)	796, 1159
PsuI	RGATCY	1 cut(s)	405
PsyI	GACNNNGTC	2 cut(s)	25, 676
RsaI	GTAC	7 cut(s)	131, 173, 350, 506, 860, 965, 1016
RsaNI	GTAC	7 cut(s)	130, 172, 349, 505, 859, 964, 1015
RseI	CAYNNNNRTG	5 cut(s)	51, 57, 506, 695, 1263
SacI	GAGCTC	1 cut(s)	1308
SaqAI	TTAA	1 cut(s)	1500
SatI	GCNGC	7 cut(s)	602, 658, 791, 918, 952, 955, 1572
Sau3AI	GATC	6 cut(s)	49, 55, 405, 778, 871, 1206
Sau96I	GGNCC	5 cut(s)	253, 420, 1099, 1127, 1485
ScrFI	CCNGG	4 cut(s)	334, 353, 559, 1525
SduI	GDGCHC	4 cut(s)	398, 807, 1001, 1308
SexAI	ACCWGGT	1 cut(s)	351
SfcI	CTRYAG	1 cut(s)	797
SinI	GGWCC	2 cut(s)	253, 420
SmiMI	CAYNNNNRTG	5 cut(s)	51, 57, 506, 695, 1263
SmlI	CTYRAG	3 cut(s)	125, 260, 1301
SmoI	CTYRAG	3 cut(s)	125, 260, 1301
Sse9I	AATT	4 cut(s)	244, 652, 853, 1053
SsiI	CCGC	9 cut(s)	188, 533, 551, 569, 744, 912, 949, 952, 955
SspMI	CTAG	4 cut(s)	455, 824, 1175, 1365
SstI	GAGCTC	1 cut(s)	1308
StyD4I	CCNGG	4 cut(s)	332, 351, 557, 1523
StyI	CCWWGG	2 cut(s)	490, 690
TaaI	ACNGT	7 cut(s)	229, 286, 319, 982, 1022, 1472, 1498
TaiI	ACGT	3 cut(s)	26, 135, 506
TaqI	TCGA	2 cut(s)	29, 1242
TasI	AATT	4 cut(s)	244, 652, 853, 1053
TatI	WGTACW	1 cut(s)	171
TauI	GCSGC	2 cut(s)	954, 957
TfiI	GAWTC	6 cut(s)	472, 640, 700, 1458, 1519, 1537
Tru1I	TTAA	1 cut(s)	1500
Tru9I	TTAA	1 cut(s)	1500
TscAI	CASTG	6 cut(s)	46, 123, 763, 985, 1281, 1477
TseFI	GTSAC	1 cut(s)	280
TseI	GCWGC	5 cut(s)	601, 657, 790, 917, 1571
Tsp45I	GTSAC	1 cut(s)	280
TspDTI	ATGAA	7 cut(s)	35, 354, 400, 1214, 1362, 1398, 1529
TspGWI	ACGGA	1 cut(s)	268
TspRI	CASTG	6 cut(s)	46, 123, 763, 985, 1281, 1477
Tth111I	GACNNNGTC	2 cut(s)	25, 676
VneI	GTGCAC	2 cut(s)	394, 803
VpaK11BI	GGWCC	2 cut(s)	253, 420
XceI	RCATGY	2 cut(s)	394, 511
XmiI	GTMKAC	1 cut(s)	321
XmnI	GAANNNNTTC	1 cut(s)	1360
XspI	CTAG	4 cut(s)	455, 824, 1175, 1365
ZraI	GACGTC	1 cut(s)	24

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.