Prupe.1G025600_v2.0.a1

3-ketoacyl-CoA synthase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0012768
Physical Location & Seq
Reverse (-)
1762070 .. 1765423
3354 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G025600.1

Sequence Viewer

Length: 1566 bp
ATGGCGGCACAGGATCATAACCAGGAAGGGAAGTCGAACTTAGGACCTGAATCGTCGGGAGGGCGTAAAGCTCTTCCGAACTTTCTTTTATCAGTGAGGCTCAAGTATGTCAAACTTGGGTACCACTATTTGATCTCTAATGCCGTCTACTTCTTACTAGTCCCTTTGATGGCCGTAGCGTCGGCCCATCTCTCAACCCTAACCCTCGAGGACTTTGTCCAATTATGGCACCAACTCAAGTTCAACTTTGTGTCAGTCACTTTGTGCTCAGGCCTCTTGGTTTTCTTAACCACCCTCTACTTCACCACCCGCCCAAGAAAAGTTTACTTGATGAACTTTGCTTGTTACAAGCCCGAGTATGCGATCACGTGCACACGTGAGCTGTTCATGGAGAGGTCTAAGCTGACAGGCAGCTTCTCTGATGAGAACTTGGCTTTTCAGCAGAAGATTCTTGAGAGGGCCGGGCTGGGGCAGAAAACCTACATGCCCGAGGCCGTGATGCGGGTCCCGCCGAACCCGTGTATGGCCGAGGCGAGGAAGGAGGCGGAAATGGTGATGTTTGGTGCCATTGACGAGTTGCTGGAGAAGACTGGGGTGAAGCCTAAGGATATTGGGATTTTGGTGGTGAACTGCAGCTTGTTCAATCCGACGCCGTCTTTGTCCGCCATGGTCGTGAATCACTACAAGCTTAGAGGGAATATTGTGAGCTACAATCTTGGTGGGATGGGTTGCAGTGCTGGGCTGATTTCTATTGACCTTGCCAAACAGCTTCTCCAGGTGCACCCAAACTCTTATGCCCTAGTGGTAAGCATGGAGAACATCACCCTCAATTGGTACTTCGGCAATGACCGCTCAATGCTTCTCTCCAACTGCCTCTTCCGATTGGGCGGTGCCGCCATCCTCCTCTCCAACCGTTCCTCTGACCGCCGCCGCTCAAAGTACCAACTCATGCATACTGTCCGCACCCATAAAGGTTCAGATGACAAAGCATACAGCTGTGTTTTCCAAAGGGAAGATGACACAAAAAGAGTCGGCGTTGCTCTCTCAAAAGACTTGATGGCTGTTGCTGGAGAAGCCCTTAAAACCAACATCACCACACTTGGCCCAATAGTCCTACCCATGTCAGAGCAACTCCTCTTCTTTGTTACTTTGGTGGCAAGAAAGGTGTTCAAGATGAAGAATATCAAACCCTACATCCCGGATTTCAAGCTGGCGTTCGAACACTTCTGCATTCACGCCGGTGGGAGAGCAGTGCTGGATGAGATGGAGAAGAACCTTGAGCTCAGTGACTGGCACATGGAGCCTTCGAGAATGACACTTTATAGGTTTGGGAACACTTCAAGCAGCTCTTTGTGGTATGAACTGGCTTACTCTGAGGCCAAGGGAAGAGTGAGGAAGGGTGATAGGATGTGGCAGATTGCGTTCGGGTCGGGTTTCAAGTGTAACAGTGCTGTGTGGAAGGCTTTGAGGACTGTTAATCCAGCTAAAGAGAAGAACCCTTGGATAGATGAGATTGATCAATTTCCTGTTGATGTGCCTAAAGTGGCACCATGCAAGGCTTCTTAA

Protein Analysis

522

Amino Acids

58.64

Weight (kDa)

9.23

Isoelectric Point (pI)

36.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012768)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G04220 AT5G43760
fragaria_vesca FvH4_4g01980 FvH4_7g17470
malus_domestica MD13G1203100.v1.1
prunus_persica Prupe.1G025600_v2.0.a1
pyrus_communis pycom07g15420 pycom13g17640 pycom16g17200
rosa_chinensis RchiOBHm_Chr4g0388941
rosa_laevigata RLG00000010005
rosa_multiflora Rmu_sc0005486.1_g000002
rosa_roxburghii Rroxscaffold_5G00335260
rosa_rugosa Rorug03G0321500
rosa_samantha Rh4AG025900 Rh4BG019200 Rh4DG019700
rosa_wichuraiana Rw4G001870

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 206
Acc65I GGTACC 1 cut(s) 120
AccB1I GGYRCC 5 cut(s) 120, 228, 563, 890, 1546
AccBSI CCGCTC 2 cut(s) 852, 933
AccI GTMKAC 1 cut(s) 147
AclWI GGATC 1 cut(s) 21
AcoI YGGCCR 2 cut(s) 171, 525
AcvI CACGTG 2 cut(s) 369, 377
AcyI GRCGYC 1 cut(s) 650
AdeI CACNNNGTG 1 cut(s) 264
AfaI GTAC 3 cut(s) 122, 836, 941
AfiI CCNNNNNNNGG 6 cut(s) 169, 468, 501, 523, 534, 831
AflIII ACRYGT 1 cut(s) 374
AgsI TTSAA 6 cut(s) 244, 643, 1171, 1207, 1341, 1438
AhlI ACTAGT 1 cut(s) 157
AjnI CCWGG 2 cut(s) 21, 774
AjuI GAANNNNNNNTTGG 2 cut(s) 860, 892
AleI CACNNNNGTG 1 cut(s) 1239
Alw21I GWGCWC 4 cut(s) 269, 374, 783, 1284
Alw44I GTGCAC 2 cut(s) 370, 779
AlwI GGATC 1 cut(s) 21
AlwNI CAGNNNCTG 1 cut(s) 1290
Ama87I CYCGRG 3 cut(s) 206, 353, 488
AoxI GGCC 8 cut(s) 171, 183, 271, 459, 492, 525, 1102, 1377
ApaLI GTGCAC 2 cut(s) 370, 779
ApeKI GCWGC 3 cut(s) 411, 633, 1344
ArsI GACNNNNNNTTYG 2 cut(s) 640, 672
Asp718I GGTACC 1 cut(s) 120
AspS9I GGNCC 5 cut(s) 44, 184, 459, 505, 1103
AsuC2I CCSGG 2 cut(s) 463, 1199
AsuHPI GGTGA 7 cut(s) 295, 565, 607, 637, 814, 1084, 1412
AsuII TTCGAA 1 cut(s) 1218
AvaI CYCGRG 3 cut(s) 206, 353, 488
AvaII GGWCC 2 cut(s) 44, 505
AxyI CCTNAGG 1 cut(s) 603
BaeGI GKGCMC 2 cut(s) 374, 783
BaeI ACNNNNGTAYC 2 cut(s) 104, 137
BanI GGYRCC 5 cut(s) 120, 228, 563, 890, 1546
BanII GRGCYC 1 cut(s) 1284
BbrPI CACGTG 2 cut(s) 369, 377
BbsI GAAGAC 1 cut(s) 593
Bbv12I GWGCWC 4 cut(s) 269, 374, 783, 1284
BbvI GCAGC 3 cut(s) 423, 645, 1356
BccI CCATC 6 cut(s) 163, 195, 718, 905, 1051, 1258
BceAI ACGGC 4 cut(s) 128, 158, 479, 637
BciT130I CCWGG 2 cut(s) 23, 776
BclI TGATCA 1 cut(s) 1516
BcnI CCSGG 2 cut(s) 463, 1199
BcuI ACTAGT 1 cut(s) 157
BfaI CTAG 2 cut(s) 158, 800
BfmI CTRYAG 1 cut(s) 631
BisI GCNGC 7 cut(s) 6, 412, 634, 894, 928, 931, 1345
BlsI GCNGC 7 cut(s) 7, 413, 635, 895, 929, 932, 1346
Bme1390I CCNGG 4 cut(s) 23, 463, 776, 1199
Bme18I GGWCC 2 cut(s) 44, 505
BmeT110I CYCGRG 3 cut(s) 206, 353, 488
BmgT120I GGNCC 5 cut(s) 44, 184, 459, 505, 1103
BmiI GGNNCC 8 cut(s) 122, 230, 506, 507, 565, 892, 1302, 1548
BmrFI CCNGG 4 cut(s) 23, 463, 776, 1199
BmrI ACTGGG 1 cut(s) 600
BmsI GCATC 1 cut(s) 489
BmuI ACTGGG 1 cut(s) 600
BpiI GAAGAC 1 cut(s) 593
BpmI CTGGAG 3 cut(s) 602, 758, 1089
Bpu10I CCTNAGC 1 cut(s) 268
Bpu14I TTCGAA 1 cut(s) 1218
BpuEI CTTGAG 4 cut(s) 86, 221, 473, 1298
BpuMI CCSGG 2 cut(s) 463, 1199
BsaAI YACGTR 2 cut(s) 369, 377
BsaHI GRCGYC 1 cut(s) 650
BsaJI CCNNGG 5 cut(s) 489, 528, 666, 1380, 1499
BsaXI ACNNNNNCTCC 2 cut(s) 756, 786
Bsc4I CCNNNNNNNGG 6 cut(s) 169, 468, 501, 523, 534, 831
Bse118I RCCGGY 1 cut(s) 1238
Bse1I ACTGG 3 cut(s) 595, 1295, 1368
Bse21I CCTNAGG 1 cut(s) 603
Bse3DI GCAATG 1 cut(s) 850
BseBI CCWGG 2 cut(s) 23, 776
BseDI CCNNGG 5 cut(s) 489, 528, 666, 1380, 1499
BseGI GGATG 5 cut(s) 729, 897, 1194, 1264, 1413
BseLI CCNNNNNNNGG 6 cut(s) 169, 468, 501, 523, 534, 831
BseMI GCAATG 1 cut(s) 850
BseMII CTCAG 3 cut(s) 282, 1297, 1365
BseNI ACTGG 3 cut(s) 595, 1295, 1368
BseRI GAGGAG 2 cut(s) 893, 1124
BseSI GKGCMC 2 cut(s) 374, 783
BseXI GCAGC 3 cut(s) 423, 645, 1356
BseYI CCCAGC 2 cut(s) 466, 737
BshFI GGCC 8 cut(s) 173, 185, 273, 461, 494, 527, 1104, 1379
BshNI GGYRCC 5 cut(s) 120, 228, 563, 890, 1546
BsiHKAI GWGCWC 4 cut(s) 269, 374, 783, 1284
BsiHKCI CYCGRG 3 cut(s) 206, 353, 488
BsiSI CCGG 3 cut(s) 462, 1199, 1239
BslFI GGGAC 2 cut(s) 146, 491
BslI CCNNNNNNNGG 6 cut(s) 169, 468, 501, 523, 534, 831
BsmFI GGGAC 2 cut(s) 146, 491
BsmI GAATGC 1 cut(s) 1230
BsnI GGCC 8 cut(s) 173, 185, 273, 461, 494, 527, 1104, 1379
BsoBI CYCGRG 3 cut(s) 206, 353, 488
Bsp119I TTCGAA 1 cut(s) 1218
Bsp1286I GDGCHC 4 cut(s) 269, 374, 783, 1284
Bsp143I GATC 4 cut(s) 13, 132, 363, 1516
Bsp19I CCATGG 1 cut(s) 666
BspANI GGCC 8 cut(s) 173, 185, 273, 461, 494, 527, 1104, 1379
BspCNI CTCAG 3 cut(s) 281, 1296, 1366
BspLI GGNNCC 8 cut(s) 122, 230, 506, 507, 565, 892, 1302, 1548
BspMAI CTGCAG 1 cut(s) 635
BspPI GGATC 1 cut(s) 21
BspQI GCTCTTC 1 cut(s) 78
BspT104I TTCGAA 1 cut(s) 1218
BspT107I GGYRCC 5 cut(s) 120, 228, 563, 890, 1546
BsrBI CCGCTC 2 cut(s) 852, 933
BsrDI GCAATG 1 cut(s) 850
BsrFI RCCGGY 1 cut(s) 1238
BsrI ACTGG 3 cut(s) 595, 1295, 1368
BssAI RCCGGY 1 cut(s) 1238
BssECI CCNNGG 5 cut(s) 489, 528, 666, 1380, 1499
BssMI GATC 4 cut(s) 13, 132, 363, 1516
BssNI GRCGYC 1 cut(s) 650
BssT1I CCWWGG 3 cut(s) 666, 1380, 1499
Bst2UI CCWGG 2 cut(s) 23, 776
Bst4CI ACNGT 4 cut(s) 914, 958, 1448, 1474
Bst6I CTCTTC 4 cut(s) 78, 881, 1142, 1381
BstACI GRCGYC 1 cut(s) 650
BstBAI YACGTR 2 cut(s) 369, 377
BstBI TTCGAA 1 cut(s) 1218
BstC8I GCNNGC 1 cut(s) 1212
BstDEI CTNAG 7 cut(s) 40, 268, 399, 603, 689, 1283, 1374
BstDSI CCRYGG 1 cut(s) 666
BstF5I GGATG 5 cut(s) 729, 897, 1194, 1264, 1413
BstKTI GATC 4 cut(s) 16, 135, 366, 1519
BstMBI GATC 4 cut(s) 13, 132, 363, 1516
BstMWI GCNNNNNNNGC 4 cut(s) 508, 849, 1073, 1300
BstNI CCWGG 2 cut(s) 23, 776
BstNSI RCATGY 1 cut(s) 487
BstSCI CCNGG 4 cut(s) 21, 461, 774, 1197
BstSFI CTRYAG 1 cut(s) 631
BstSLI GKGCMC 2 cut(s) 374, 783
BstV1I GCAGC 3 cut(s) 423, 645, 1356
BstV2I GAAGAC 1 cut(s) 593
Bsu36I CCTNAGG 1 cut(s) 603
BsuRI GGCC 8 cut(s) 173, 185, 273, 461, 494, 527, 1104, 1379
BtgI CCRYGG 1 cut(s) 666
BtsCI GGATG 5 cut(s) 729, 897, 1194, 1264, 1413
BtsI GCAGTG 2 cut(s) 739, 1257
BtsIMutI CAGTG 5 cut(s) 99, 739, 1257, 1291, 1453
Cac8I GCNNGC 1 cut(s) 1212
CaiI CAGNNNCTG 1 cut(s) 1290
Cfr10I RCCGGY 1 cut(s) 1238
Cfr13I GGNCC 5 cut(s) 44, 184, 459, 505, 1103
CseI GACGC 2 cut(s) 168, 658
Csp6I GTAC 3 cut(s) 121, 835, 940
CspCI CAANNNNNGTGG 2 cut(s) 700, 735
CviAII CATG 8 cut(s) 388, 484, 667, 811, 949, 1120, 1297, 1551
CviQI GTAC 3 cut(s) 121, 835, 940
DdeI CTNAG 7 cut(s) 40, 268, 399, 603, 689, 1283, 1374
DpnI GATC 4 cut(s) 15, 134, 365, 1518
DpnII GATC 4 cut(s) 13, 132, 363, 1516
DraIII CACNNNGTG 1 cut(s) 264
EaeI YGGCCR 2 cut(s) 171, 525
Eam1104I CTCTTC 4 cut(s) 78, 881, 1142, 1381
EarI CTCTTC 4 cut(s) 78, 881, 1142, 1381
EciI GGCGGA 2 cut(s) 560, 652
Ecl136II GAGCTC 1 cut(s) 1282
Eco130I CCWWGG 3 cut(s) 666, 1380, 1499
Eco147I AGGCCT 1 cut(s) 273
Eco24I GRGCYC 1 cut(s) 1284
Eco47I GGWCC 2 cut(s) 44, 505
Eco53kI GAGCTC 1 cut(s) 1282
Eco72I CACGTG 2 cut(s) 369, 377
Eco81I CCTNAGG 1 cut(s) 603
Eco88I CYCGRG 3 cut(s) 206, 353, 488
EcoICRI GAGCTC 1 cut(s) 1282
EcoO109I RGGNCCY 2 cut(s) 44, 505
EcoRII CCWGG 2 cut(s) 21, 774
EcoT14I CCWWGG 3 cut(s) 666, 1380, 1499
EcoT22I ATGCAT 1 cut(s) 954
EcoT38I GRGCYC 1 cut(s) 1284
ErhI CCWWGG 3 cut(s) 666, 1380, 1499
FaeI CATG 8 cut(s) 391, 487, 670, 814, 952, 1123, 1300, 1554
FalI AAGNNNNNCTT 6 cut(s) 23, 55, 230, 262, 1333, 1365
FaqI GGGAC 2 cut(s) 146, 491
FatI CATG 8 cut(s) 387, 483, 666, 810, 948, 1119, 1296, 1550
FauI CCCGC 3 cut(s) 317, 495, 516
FbaI TGATCA 1 cut(s) 1516
FblI GTMKAC 1 cut(s) 147
Fnu4HI GCNGC 7 cut(s) 6, 412, 634, 894, 928, 931, 1345
FokI GGATG 5 cut(s) 736, 884, 1181, 1271, 1420
FriOI GRGCYC 1 cut(s) 1284
Fsp4HI GCNGC 7 cut(s) 6, 412, 634, 894, 928, 931, 1345
FspBI CTAG 2 cut(s) 158, 800
GluI GCNGC 7 cut(s) 6, 412, 634, 894, 928, 931, 1345
GsaI CCCAGC 2 cut(s) 470, 741
GsuI CTGGAG 3 cut(s) 602, 758, 1089
HaeIII GGCC 8 cut(s) 173, 185, 273, 461, 494, 527, 1104, 1379
HapII CCGG 3 cut(s) 462, 1199, 1239
HgaI GACGC 2 cut(s) 168, 658
Hin1I GRCGYC 1 cut(s) 650
Hin1II CATG 8 cut(s) 391, 487, 670, 814, 952, 1123, 1300, 1554
HindIII AAGCTT 1 cut(s) 686
HinfI GANTC 4 cut(s) 50, 448, 676, 1029
HpaII CCGG 3 cut(s) 462, 1199, 1239
HphI GGTGA 7 cut(s) 295, 565, 607, 637, 814, 1084, 1412
Hpy166II GTNNAC 5 cut(s) 148, 325, 372, 628, 781
Hpy188I TCNGA 8 cut(s) 78, 421, 648, 881, 922, 979, 1126, 1375
Hpy188III TCNNGA 5 cut(s) 57, 452, 673, 1171, 1308
Hpy8I GTNNAC 5 cut(s) 148, 325, 372, 628, 781
Hpy99I CGWCG 3 cut(s) 58, 184, 652
HpyAV CCTTC 5 cut(s) 20, 532, 1314, 1390, 1453
HpyCH4III ACNGT 4 cut(s) 914, 958, 1448, 1474
HpyCH4IV ACGT 2 cut(s) 368, 376
HpyCH4V TGCA 7 cut(s) 372, 633, 732, 781, 952, 1230, 1554
HpyF10VI GCNNNNNNNGC 4 cut(s) 508, 849, 1073, 1300
HpyF3I CTNAG 7 cut(s) 40, 268, 399, 603, 689, 1283, 1374
HpySE526I ACGT 2 cut(s) 368, 376
Hsp92I GRCGYC 1 cut(s) 650
Hsp92II CATG 8 cut(s) 391, 487, 670, 814, 952, 1123, 1300, 1554
KflI GGGWCCC 1 cut(s) 505
KpnI GGTACC 1 cut(s) 124
Ksp22I TGATCA 1 cut(s) 1516
Kzo9I GATC 4 cut(s) 13, 132, 363, 1516
LguI GCTCTTC 1 cut(s) 78
LmnI GCTCC 1 cut(s) 1300
Lsp1109I GCAGC 3 cut(s) 423, 645, 1356
LweI GCATC 1 cut(s) 489
MaeI CTAG 2 cut(s) 158, 800
MaeII ACGT 2 cut(s) 368, 376
MaeIII GTNAC 5 cut(s) 256, 344, 1144, 1286, 1442
MalI GATC 4 cut(s) 15, 134, 365, 1518
MbiI CCGCTC 2 cut(s) 852, 933
MboI GATC 4 cut(s) 13, 132, 363, 1516
MfeI CAATTG 1 cut(s) 829
MhlI GDGCHC 4 cut(s) 269, 374, 783, 1284
MluCI AATT 3 cut(s) 221, 829, 1520
MlyI GAGTC 1 cut(s) 1038
MmeI TCCRAC 3 cut(s) 671, 891, 933
Mph1103I ATGCAT 1 cut(s) 954
MseI TTAA 4 cut(s) 287, 1080, 1476, 1564
MslI CAYNNNNRTG 2 cut(s) 671, 1239
MspA1I CMGCKG 1 cut(s) 996
MspI CCGG 3 cut(s) 462, 1199, 1239
MspR9I CCNGG 4 cut(s) 23, 463, 776, 1199
MunI CAATTG 1 cut(s) 829
Mva1269I GAATGC 1 cut(s) 1230
MvaI CCWGG 2 cut(s) 23, 776
MwoI GCNNNNNNNGC 4 cut(s) 508, 849, 1073, 1300
NciI CCSGG 2 cut(s) 463, 1199
NcoI CCATGG 1 cut(s) 666
NdeII GATC 4 cut(s) 13, 132, 363, 1516
NlaIII CATG 8 cut(s) 391, 487, 670, 814, 952, 1123, 1300, 1554
NlaIV GGNNCC 8 cut(s) 122, 230, 506, 507, 565, 892, 1302, 1548
NmeAIII GCCGAG 1 cut(s) 553
NmuCI GTSAC 2 cut(s) 256, 1286
NsiI ATGCAT 1 cut(s) 954
NspI RCATGY 1 cut(s) 487
NspV TTCGAA 1 cut(s) 1218
OliI CACNNNNGTG 1 cut(s) 1239
PaeR7I CTCGAG 1 cut(s) 206
PceI AGGCCT 1 cut(s) 273
PciSI GCTCTTC 1 cut(s) 78
PctI GAATGC 1 cut(s) 1230
PfeI GAWTC 3 cut(s) 50, 448, 676
PflFI GACNNNGTC 2 cut(s) 215, 652
PfoI TCCNGGA 1 cut(s) 1197
PkrI GCNGC 7 cut(s) 7, 413, 635, 895, 929, 932, 1346
PleI GAGTC 1 cut(s) 1037
PmaCI CACGTG 2 cut(s) 369, 377
PmlI CACGTG 2 cut(s) 369, 377
PpsI GAGTC 1 cut(s) 1037
Ppu21I YACGTR 2 cut(s) 369, 377
PpuMI RGGWCCY 2 cut(s) 44, 505
Psp124BI GAGCTC 1 cut(s) 1284
Psp5II RGGWCCY 2 cut(s) 44, 505
Psp6I CCWGG 2 cut(s) 21, 774
PspCI CACGTG 2 cut(s) 369, 377
PspFI CCCAGC 2 cut(s) 466, 737
PspGI CCWGG 2 cut(s) 21, 774
PspN4I GGNNCC 8 cut(s) 122, 230, 506, 507, 565, 892, 1302, 1548
PspPI GGNCC 5 cut(s) 44, 184, 459, 505, 1103
PspPPI RGGWCCY 2 cut(s) 44, 505
PspXI VCTCGAGB 1 cut(s) 206
PstI CTGCAG 1 cut(s) 635
PstNI CAGNNNCTG 1 cut(s) 1290
PsyI GACNNNGTC 2 cut(s) 215, 652
PvuII CAGCTG 1 cut(s) 996
RsaI GTAC 3 cut(s) 122, 836, 941
RsaNI GTAC 3 cut(s) 121, 835, 940
RseI CAYNNNNRTG 2 cut(s) 671, 1239
SacI GAGCTC 1 cut(s) 1284
SapI GCTCTTC 1 cut(s) 78
SaqAI TTAA 4 cut(s) 287, 1080, 1476, 1564
SatI GCNGC 7 cut(s) 6, 412, 634, 894, 928, 931, 1345
Sau3AI GATC 4 cut(s) 13, 132, 363, 1516
Sau96I GGNCC 5 cut(s) 44, 184, 459, 505, 1103
SchI GAGTC 1 cut(s) 1038
ScrFI CCNGG 4 cut(s) 23, 463, 776, 1199
SduI GDGCHC 4 cut(s) 269, 374, 783, 1284
SfaNI GCATC 1 cut(s) 489
SfcI CTRYAG 1 cut(s) 631
Sfr274I CTCGAG 1 cut(s) 206
SfuI TTCGAA 1 cut(s) 1218
SgrAI CRCCGGYG 1 cut(s) 1238
SinI GGWCC 2 cut(s) 44, 505
SlaI CTCGAG 1 cut(s) 206
SmiMI CAYNNNNRTG 2 cut(s) 671, 1239
SmlI CTYRAG 5 cut(s) 101, 206, 236, 452, 1277
SmoI CTYRAG 5 cut(s) 101, 206, 236, 452, 1277
SpeI ACTAGT 1 cut(s) 157
Sse9I AATT 3 cut(s) 221, 829, 1520
SseBI AGGCCT 1 cut(s) 273
SspI AATATT 1 cut(s) 700
SspMI CTAG 2 cut(s) 158, 800
SstI GAGCTC 1 cut(s) 1284
StuI AGGCCT 1 cut(s) 273
StyD4I CCNGG 4 cut(s) 21, 461, 774, 1197
StyI CCWWGG 3 cut(s) 666, 1380, 1499
TaaI ACNGT 4 cut(s) 914, 958, 1448, 1474
TaiI ACGT 2 cut(s) 371, 379
TaqI TCGA 4 cut(s) 35, 207, 1218, 1307
TasI AATT 3 cut(s) 221, 829, 1520
TauI GCSGC 4 cut(s) 8, 896, 930, 933
TfiI GAWTC 3 cut(s) 50, 448, 676
Tru1I TTAA 4 cut(s) 287, 1080, 1476, 1564
Tru9I TTAA 4 cut(s) 287, 1080, 1476, 1564
TscAI CASTG 5 cut(s) 99, 739, 1257, 1291, 1453
TseFI GTSAC 2 cut(s) 256, 1286
TseI GCWGC 3 cut(s) 411, 633, 1344
Tsp45I GTSAC 2 cut(s) 256, 1286
TspDTI ATGAA 4 cut(s) 347, 376, 1190, 1374
TspRI CASTG 5 cut(s) 99, 739, 1257, 1291, 1453
Tth111I GACNNNGTC 2 cut(s) 215, 652
VneI GTGCAC 2 cut(s) 370, 779
VpaK11BI GGWCC 2 cut(s) 44, 505
XceI RCATGY 1 cut(s) 487
XhoI CTCGAG 1 cut(s) 206
XmiI GTMKAC 1 cut(s) 147
XspI CTAG 2 cut(s) 158, 800
Zsp2I ATGCAT 1 cut(s) 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.