FvH4_4g03570

FAD binding domain of DNA photolyase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0006855
Physical Location & Seq
Reverse (-)
3212007 .. 3217938
5932 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g03570.t1

Sequence Viewer

Length: 1938 bp
ATGGGTAGCAGCAATAAGACCATAGTTTGGTTTAGAAGGGATCTGAGGATTGAGGACAATCCAGCCTTAGCTGCTGCTGCTAGGGATGGTGCTGTCTTTCCTGTATACATATGGTGCCCGAAGGACGAAGGACACTTTTACCCAGGTCGAGTTTCGAGGTGGTGGCTGAAGCAGTCTCTTGCTCACTTGGATCAGTCATTGAAGTCTCTCGGGGCTCAACTTGCACTGATCAAAACCGACAGTACTGTTTCTGCTCTCTTGGACTGCATTCAAGCTATTGGAGCCACAAAAGTAGTGTTCAACCATCTATATGATCCTGTTTCACTCGTGCGTGATCACAACATCAAAGGAAAGCTGGTAGAGCTAGGAATTTCTGTGCAAAGCTATAATGCAGATTTGTTGCACGAGCCATGGGAAGTATATGATGCAAAAGGGCAAACATTTACAACATTTAAGGAATACTGGGACAAGTGCTTAAACATGGAGAGGGAACTTGTGACATTTCTTCCTCCGTGGAAATTATTGCAGGCAACAGGAATGGTGGCAAAATATTCACTCGAAGAATTGGGTCTCGAAAATGAAACTGAAAAATCTAGCAATGCACTCTTAGGAAGAGCATGGACTCCAGGCTGGAGCCAAGCTGATAAAGCTTTAACTGAATTCTTTGACGTTCACCTGCTAGACTATGCAAAGAACAGGACAAAACTTGGGGGAAACTCAACATCGCTATTGTCCCCATATCTTCACTTTGGAGAAGTGAGTGTGAGGAAAGTTTTCCAGTTAGCTCGAATGAAACAGATACTGTTTGCAAAAGAAGGGAACTCTCTTGGTGAAGAGAGTGTGACTCTTTTTCTCCGGGCCATTGGGCTTAGAGAATTCTCACGTTATATTTGTTTTAACTTTCCATTCACTCATGAGAAATTACTGCTGAGCAACTTGAGATTCTTTCCATGGAAAGCCGACCAGGGACGTTTTAAGGCTTGGAGACAAGGTCGGACCGGCTACCCTTTAGTTGATGCAGGAATGAGAGAGCTTTGGGCAACTGGGTGGATACACAACAGAATAAGAGTGATTGTTTCAAGTTTTGCTGTGAAGGTTTTGCTTCTTCCTTGGAAATGGGGAATGAAGTATTTCTGGGACACGCTTATGGATGCAGACTTGGAAAGTGATATCCTTGGTTGGCAGTATATCTCAGGGAGCTTACCAGATGGCCATGAGCTTGAGCGTTTGGATAGTCCAGAGGTCCAAGGTTCAAAATTTGATCCAGATGGTGAATATGTAAGGCATTGGCTGCCCGAGTTAGCACGTTTGCCAACTGAGTGGATCCATCATCCTTGGGACACACCCGATAATGTGCTTAAAGTTTCTGGAGTAGAGCTAGGAGTCAACTACCCAAGACCTATCATCGAGATAGATTTGGCTAGAGAACGTTTGACTGAAGCCATATTCAAGATGTGGGAAATCGAAGCAGCTGCAAAGGCTGCAAATCTGAATGGTACAAATGAAGTTGTTGTTGATAACTCTGATGGGATTGAAAACTTTCCGATCCCAAAGGTGATCTTAAGGAACAATACTCCTTGTGCTACTTATTCATCTAATGATCAGAAAGTACCTTCATGTCACAATTCTGAGGGAAATCAATTGAAGAGATCCAGATGTACACAAGAACGGCCACTACCAGATAATGGGCATAATACTAATCCTAATGAAGCGACCTCAAGAACAATTGAAGACAGGAGCTCTACAGCTGAATCTTCAATGTCTAAGAAGCAGACGACCAGCACAACTTCATTTTCTGTTCCACAGTCATGTTCCTCATCAAAAGATAATCCTTTTATGGAGTCTGAATCTTGTGAAATGAAGCAGTCATGGCAAGAACGGATTGACATGGAACAGCATTCAAGTAAAGATGGAGCTTTGGAAGATGAATGCCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000166 GO:0001101 GO:0002252 GO:0002376 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005773 GO:0006139 GO:0006325 GO:0006338 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006873 GO:0006874 GO:0006875 GO:0006950 GO:0006952 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0007623 GO:0008144 GO:0008150 GO:0008152 GO:0009117 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009606 GO:0009607 GO:0009615 GO:0009628 GO:0009637 GO:0009638 GO:0009642 GO:0009645 GO:0009646 GO:0009648 GO:0009719 GO:0009725 GO:0009785 GO:0009791 GO:0009881 GO:0009882 GO:0009888 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010033 GO:0010035 GO:0010073 GO:0010075 GO:0010118 GO:0010228 GO:0010244 GO:0010617 GO:0014070 GO:0016043 GO:0016604 GO:0017076 GO:0019222 GO:0019637 GO:0019725 GO:0022414 GO:0022603 GO:0023052 GO:0030003 GO:0030522 GO:0030554 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0033993 GO:0034641 GO:0035639 GO:0036094 GO:0038023 GO:0040008 GO:0042221 GO:0042592 GO:0042726 GO:0042752 GO:0042802 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048037 GO:0048507 GO:0048509 GO:0048511 GO:0048518 GO:0048522 GO:0048571 GO:0048573 GO:0048574 GO:0048580 GO:0048582 GO:0048583 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048856 GO:0048878 GO:0050660 GO:0050662 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051094 GO:0051186 GO:0051239 GO:0051240 GO:0051276 GO:0051480 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055086 GO:0060089 GO:0061458 GO:0065007 GO:0065008 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071949 GO:0072387 GO:0072503 GO:0072507 GO:0097159 GO:0097367 GO:0098542 GO:0098771 GO:0104004 GO:1900618 GO:1901265 GO:1901360 GO:1901363 GO:1901371 GO:1901564 GO:1901700 GO:1902347 GO:1905421 GO:2000024 GO:2000026 GO:2000028 GO:2000241 GO:2000243 GO:2000377 GO:2000379
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
DNA_photolyase FAD_binding_7

Protein Analysis

646

Amino Acids

73.4

Weight (kDa)

5.82

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_photolyase PF00875 7 - 160 2.9e-39 DNA photolyase
FAD_binding_7 PF03441 284 - 482 9.9e-69 FAD binding domain of DNA photolyase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 684
Acc36I ACCTGC 1 cut(s) 684
AccB1I GGYRCC 1 cut(s) 114
AccB7I CCANNNNNTGG 2 cut(s) 27, 1685
AccI GTMKAC 1 cut(s) 105
AclI AACGTT 1 cut(s) 1429
AclWI GGATC 8 cut(s) 48, 198, 308, 1256, 1318, 1331, 1540, 1644
AcoI YGGCCR 2 cut(s) 1210, 1670
AcsI RAATTY 4 cut(s) 369, 659, 875, 1256
AcuI CTGAAG 2 cut(s) 188, 1458
AfaI GTAC 4 cut(s) 244, 1498, 1611, 1660
AfiI CCNNNNNNNGG 2 cut(s) 27, 1685
AflII CTTAAG 1 cut(s) 1561
AjnI CCWGG 3 cut(s) 142, 625, 963
Alw21I GWGCWC 1 cut(s) 1742
Alw26I GTCTC 4 cut(s) 180, 210, 575, 979
AlwI GGATC 8 cut(s) 48, 198, 308, 1256, 1318, 1331, 1540, 1644
AlwNI CAGNNNCTG 1 cut(s) 802
Ama87I CYCGRG 2 cut(s) 209, 1295
AoxI GGCC 3 cut(s) 858, 1210, 1670
ApeKI GCWGC 8 cut(s) 9, 71, 74, 77, 1291, 1469, 1472, 1481
ApoI RAATTY 4 cut(s) 369, 659, 875, 1256
Asp700I GAANNNNTTC 3 cut(s) 773, 1130, 1539
AspS9I GGNCC 3 cut(s) 858, 996, 1243
AsuC2I CCSGG 1 cut(s) 857
AsuHPI GGTGA 4 cut(s) 665, 842, 1283, 1567
AvaI CYCGRG 2 cut(s) 209, 1295
AvaII GGWCC 2 cut(s) 996, 1243
BaeGI GKGCMC 1 cut(s) 119
BalI TGGCCA 1 cut(s) 1212
BamHI GGATCC 1 cut(s) 1323
BanI GGYRCC 1 cut(s) 114
BanII GRGCYC 2 cut(s) 217, 1742
BauI CACGAG 2 cut(s) 326, 404
BbsI GAAGAC 1 cut(s) 1737
Bbv12I GWGCWC 1 cut(s) 1742
BbvI GCAGC 8 cut(s) 21, 58, 61, 64, 1278, 1459, 1468, 1481
BccI CCATC 7 cut(s) 80, 312, 1202, 1262, 1335, 1520, 1904
BceAI ACGGC 1 cut(s) 1685
BcgI CGANNNNNNTGC 2 cut(s) 1454, 1488
BciT130I CCWGG 3 cut(s) 144, 627, 965
BciVI GTATCC 1 cut(s) 1044
BclI TGATCA 3 cut(s) 228, 334, 1600
BcnI CCSGG 1 cut(s) 857
BcoDI GTCTC 4 cut(s) 180, 210, 575, 979
BfaI CTAG 7 cut(s) 81, 365, 594, 680, 1379, 1422, 1936
BfmI CTRYAG 1 cut(s) 1743
BfrI CTTAAG 1 cut(s) 1561
BfuAI ACCTGC 1 cut(s) 684
BfuI GTATCC 1 cut(s) 1044
BisI GCNGC 8 cut(s) 10, 72, 75, 78, 1292, 1470, 1473, 1482
BlpI GCTNAGC 1 cut(s) 929
BlsI GCNGC 8 cut(s) 11, 73, 76, 79, 1293, 1471, 1474, 1483
BmcAI AGTACT 1 cut(s) 244
Bme1390I CCNGG 4 cut(s) 144, 627, 857, 965
Bme18I GGWCC 2 cut(s) 996, 1243
BmeT110I CYCGRG 2 cut(s) 209, 1295
BmgT120I GGNCC 3 cut(s) 858, 996, 1243
BmiI GGNNCC 4 cut(s) 116, 283, 635, 1325
BmrFI CCNGG 4 cut(s) 144, 627, 857, 965
BmrI ACTGGG 2 cut(s) 472, 1053
BmsI GCATC 3 cut(s) 415, 1006, 1141
BmuI ACTGGG 2 cut(s) 472, 1053
BpiI GAAGAC 1 cut(s) 1737
BplI GAGNNNNNCTC 2 cut(s) 829, 861
BpmI CTGGAG 3 cut(s) 609, 652, 1389
Bpu10I CCTNAGC 1 cut(s) 67
Bpu1102I GCTNAGC 1 cut(s) 929
BpuEI CTTGAG 3 cut(s) 958, 1241, 1702
BpuMI CCSGG 1 cut(s) 857
BsaI GGTCTC 1 cut(s) 575
BsaJI CCNNGG 9 cut(s) 142, 410, 512, 950, 964, 1109, 1174, 1246, 1334
BsaXI ACNNNNNCTCC 2 cut(s) 976, 1006
Bsc4I CCNNNNNNNGG 2 cut(s) 27, 1685
Bse118I RCCGGY 1 cut(s) 998
Bse1I ACTGG 3 cut(s) 467, 778, 1048
Bse3DI GCAATG 1 cut(s) 604
BseBI CCWGG 3 cut(s) 144, 627, 965
BseDI CCNNGG 9 cut(s) 142, 410, 512, 950, 964, 1109, 1174, 1246, 1334
BseGI GGATG 3 cut(s) 91, 1156, 1330
BseLI CCNNNNNNNGG 2 cut(s) 27, 1685
BseMI GCAATG 1 cut(s) 604
BseMII CTCAG 5 cut(s) 35, 920, 1206, 1308, 1620
BseNI ACTGG 3 cut(s) 467, 778, 1048
BseSI GKGCMC 1 cut(s) 119
BseXI GCAGC 8 cut(s) 21, 58, 61, 64, 1278, 1459, 1468, 1481
BshFI GGCC 3 cut(s) 860, 1212, 1672
BshNI GGYRCC 1 cut(s) 114
BsiHKAI GWGCWC 1 cut(s) 1742
BsiHKCI CYCGRG 2 cut(s) 209, 1295
BsiSI CCGG 2 cut(s) 856, 999
BslFI GGGAC 5 cut(s) 479, 718, 981, 1151, 1352
BslI CCNNNNNNNGG 2 cut(s) 27, 1685
BsmAI GTCTC 4 cut(s) 180, 210, 575, 979
BsmFI GGGAC 5 cut(s) 479, 718, 981, 1151, 1352
BsmI GAATGC 3 cut(s) 267, 1897, 1934
BsnI GGCC 3 cut(s) 860, 1212, 1672
Bso31I GGTCTC 1 cut(s) 575
BsoBI CYCGRG 2 cut(s) 209, 1295
Bsp1286I GDGCHC 3 cut(s) 119, 217, 1742
Bsp1407I TGTACA 1 cut(s) 1658
Bsp1720I GCTNAGC 1 cut(s) 929
Bsp19I CCATGG 2 cut(s) 410, 950
BspANI GGCC 3 cut(s) 860, 1212, 1672
BspCNI CTCAG 5 cut(s) 36, 921, 1205, 1309, 1621
BspHI TCATGA 1 cut(s) 913
BspLI GGNNCC 4 cut(s) 116, 283, 635, 1325
BspMI ACCTGC 1 cut(s) 684
BspPI GGATC 8 cut(s) 48, 198, 308, 1256, 1318, 1331, 1540, 1644
BspQI GCTCTTC 1 cut(s) 607
BspT107I GGYRCC 1 cut(s) 114
BspTI CTTAAG 1 cut(s) 1561
BspTNI GGTCTC 1 cut(s) 575
BsrDI GCAATG 1 cut(s) 604
BsrFI RCCGGY 1 cut(s) 998
BsrGI TGTACA 1 cut(s) 1658
BsrI ACTGG 3 cut(s) 467, 778, 1048
BssAI RCCGGY 1 cut(s) 998
BssECI CCNNGG 9 cut(s) 142, 410, 512, 950, 964, 1109, 1174, 1246, 1334
BssNAI GTATAC 1 cut(s) 106
BssSI CACGAG 2 cut(s) 326, 404
BssT1I CCWWGG 6 cut(s) 410, 950, 1109, 1174, 1246, 1334
Bst1107I GTATAC 1 cut(s) 106
Bst2BI CACGAG 2 cut(s) 326, 404
Bst2UI CCWGG 3 cut(s) 144, 627, 965
Bst4CI ACNGT 4 cut(s) 242, 247, 804, 1806
Bst6I CTCTTC 3 cut(s) 607, 828, 1640
BstAFI CTTAAG 1 cut(s) 1561
BstAPI GCANNNNNTGC 2 cut(s) 1291, 1481
BstAUI TGTACA 1 cut(s) 1658
BstC8I GCNNGC 1 cut(s) 528
BstDEI CTNAG 9 cut(s) 44, 67, 607, 869, 929, 1192, 1317, 1629, 1764
BstDSI CCRYGG 3 cut(s) 410, 512, 950
BstF5I GGATG 3 cut(s) 91, 1156, 1330
BstMAI GTCTC 4 cut(s) 180, 210, 575, 979
BstNI CCWGG 3 cut(s) 144, 627, 965
BstSCI CCNGG 4 cut(s) 142, 625, 855, 963
BstSFI CTRYAG 1 cut(s) 1743
BstSLI GKGCMC 1 cut(s) 119
BstV1I GCAGC 8 cut(s) 21, 58, 61, 64, 1278, 1459, 1468, 1481
BstV2I GAAGAC 1 cut(s) 1737
BstX2I RGATCY 3 cut(s) 40, 1323, 1649
BstXI CCANNNNNNTGG 1 cut(s) 1320
BstYI RGATCY 3 cut(s) 40, 1323, 1649
BstZ17I GTATAC 1 cut(s) 106
BsuI GTATCC 1 cut(s) 1044
BsuRI GGCC 3 cut(s) 860, 1212, 1672
BtgI CCRYGG 3 cut(s) 410, 512, 950
BtgZI GCGATG 1 cut(s) 708
BtsCI GGATG 3 cut(s) 91, 1156, 1330
BtsIMutI CAGTG 1 cut(s) 224
BveI ACCTGC 1 cut(s) 684
Cac8I GCNNGC 1 cut(s) 528
CaiI CAGNNNCTG 1 cut(s) 802
CciI TCATGA 1 cut(s) 913
Cfr10I RCCGGY 1 cut(s) 998
Cfr13I GGNCC 3 cut(s) 858, 996, 1243
CpoI CGGWCCG 1 cut(s) 996
Csp6I GTAC 4 cut(s) 243, 1497, 1610, 1659
CspI CGGWCCG 1 cut(s) 996
CviQI GTAC 4 cut(s) 243, 1497, 1610, 1659
DdeI CTNAG 9 cut(s) 44, 67, 607, 869, 929, 1192, 1317, 1629, 1764
EaeI YGGCCR 2 cut(s) 1210, 1670
Eam1104I CTCTTC 3 cut(s) 607, 828, 1640
EarI CTCTTC 3 cut(s) 607, 828, 1640
Ecl136II GAGCTC 1 cut(s) 1740
Eco130I CCWWGG 6 cut(s) 410, 950, 1109, 1174, 1246, 1334
Eco24I GRGCYC 2 cut(s) 217, 1742
Eco31I GGTCTC 1 cut(s) 575
Eco32I GATATC 1 cut(s) 1171
Eco47I GGWCC 2 cut(s) 996, 1243
Eco53kI GAGCTC 1 cut(s) 1740
Eco57I CTGAAG 2 cut(s) 188, 1458
Eco88I CYCGRG 2 cut(s) 209, 1295
EcoICRI GAGCTC 1 cut(s) 1740
EcoRI GAATTC 2 cut(s) 659, 875
EcoRII CCWGG 3 cut(s) 142, 625, 963
EcoRV GATATC 1 cut(s) 1171
EcoT14I CCWWGG 6 cut(s) 410, 950, 1109, 1174, 1246, 1334
EcoT38I GRGCYC 2 cut(s) 217, 1742
ErhI CCWWGG 6 cut(s) 410, 950, 1109, 1174, 1246, 1334
FalI AAGNNNNNCTT 2 cut(s) 1544, 1576
FaqI GGGAC 5 cut(s) 479, 718, 981, 1151, 1352
FauNDI CATATG 1 cut(s) 110
FbaI TGATCA 3 cut(s) 228, 334, 1600
FblI GTMKAC 1 cut(s) 105
Fnu4HI GCNGC 8 cut(s) 10, 72, 75, 78, 1292, 1470, 1473, 1482
FokI GGATG 3 cut(s) 98, 1163, 1317
FriOI GRGCYC 2 cut(s) 217, 1742
Fsp4HI GCNGC 8 cut(s) 10, 72, 75, 78, 1292, 1470, 1473, 1482
FspBI CTAG 7 cut(s) 81, 365, 594, 680, 1379, 1422, 1936
GluI GCNGC 8 cut(s) 10, 72, 75, 78, 1292, 1470, 1473, 1482
GsuI CTGGAG 3 cut(s) 609, 652, 1389
HaeIII GGCC 3 cut(s) 860, 1212, 1672
HapII CCGG 2 cut(s) 856, 999
HincII GTYRAC 1 cut(s) 1387
HindII GTYRAC 1 cut(s) 1387
HindIII AAGCTT 1 cut(s) 648
HinfI GANTC 7 cut(s) 622, 844, 942, 1383, 1751, 1841, 1847
HpaII CCGG 2 cut(s) 856, 999
HphI GGTGA 4 cut(s) 665, 842, 1283, 1567
Hpy166II GTNNAC 4 cut(s) 106, 673, 1387, 1661
Hpy188I TCNGA 8 cut(s) 45, 996, 1491, 1525, 1545, 1605, 1630, 1846
Hpy188III TCNNGA 9 cut(s) 572, 914, 1238, 1265, 1368, 1408, 1450, 1653, 1719
Hpy8I GTNNAC 4 cut(s) 106, 673, 1387, 1661
HpyAV CCTTC 6 cut(s) 30, 115, 122, 809, 1087, 1623
HpyCH4III ACNGT 4 cut(s) 242, 247, 804, 1806
HpyCH4IV ACGT 5 cut(s) 669, 883, 970, 1306, 1429
HpyF3I CTNAG 9 cut(s) 44, 67, 607, 869, 929, 1192, 1317, 1629, 1764
HpySE526I ACGT 5 cut(s) 669, 883, 970, 1306, 1429
Ksp22I TGATCA 3 cut(s) 228, 334, 1600
LguI GCTCTTC 1 cut(s) 607
LmnI GCTCC 5 cut(s) 281, 633, 1197, 1737, 1913
Lsp1109I GCAGC 8 cut(s) 21, 58, 61, 64, 1278, 1459, 1468, 1481
LweI GCATC 3 cut(s) 415, 1006, 1141
MaeI CTAG 7 cut(s) 81, 365, 594, 680, 1379, 1422, 1936
MaeII ACGT 5 cut(s) 669, 883, 970, 1306, 1429
MaeIII GTNAC 3 cut(s) 496, 841, 1619
MfeI CAATTG 2 cut(s) 1640, 1725
MflI RGATCY 3 cut(s) 40, 1323, 1649
MhlI GDGCHC 3 cut(s) 119, 217, 1742
MlsI TGGCCA 1 cut(s) 1212
MluNI TGGCCA 1 cut(s) 1212
MlyI GAGTC 4 cut(s) 616, 838, 1392, 1850
MmeI TCCRAC 1 cut(s) 974
Mox20I TGGCCA 1 cut(s) 1212
MroXI GAANNNNTTC 3 cut(s) 773, 1130, 1539
MscI TGGCCA 1 cut(s) 1212
MseI TTAA 7 cut(s) 453, 476, 653, 897, 975, 1359, 1562
MslI CAYNNNNRTG 3 cut(s) 309, 1145, 1807
Msp20I TGGCCA 1 cut(s) 1212
MspA1I CMGCKG 2 cut(s) 1472, 1748
MspCI CTTAAG 1 cut(s) 1561
MspI CCGG 2 cut(s) 856, 999
MspR9I CCNGG 4 cut(s) 144, 627, 857, 965
MunI CAATTG 2 cut(s) 1640, 1725
Mva1269I GAATGC 3 cut(s) 267, 1897, 1934
MvaI CCWGG 3 cut(s) 144, 627, 965
NciI CCSGG 1 cut(s) 857
NcoI CCATGG 2 cut(s) 410, 950
NdeI CATATG 1 cut(s) 110
NlaIV GGNNCC 4 cut(s) 116, 283, 635, 1325
NmuCI GTSAC 3 cut(s) 496, 841, 1619
PagI TCATGA 1 cut(s) 913
PaqCI CACCTGC 1 cut(s) 684
PciSI GCTCTTC 1 cut(s) 607
PctI GAATGC 3 cut(s) 267, 1897, 1934
PdmI GAANNNNTTC 3 cut(s) 773, 1130, 1539
PfeI GAWTC 3 cut(s) 942, 1751, 1847
PflFI GACNNNGTC 1 cut(s) 990
PflMI CCANNNNNTGG 2 cut(s) 27, 1685
PkrI GCNGC 8 cut(s) 11, 73, 76, 79, 1293, 1471, 1474, 1483
PleI GAGTC 4 cut(s) 616, 838, 1391, 1849
PpsI GAGTC 4 cut(s) 616, 838, 1391, 1849
Psp124BI GAGCTC 1 cut(s) 1742
Psp1406I AACGTT 1 cut(s) 1429
Psp6I CCWGG 3 cut(s) 142, 625, 963
PspGI CCWGG 3 cut(s) 142, 625, 963
PspN4I GGNNCC 4 cut(s) 116, 283, 635, 1325
PspPI GGNCC 3 cut(s) 858, 996, 1243
PsrI GAACNNNNNNTAC 2 cut(s) 1659, 1691
PstNI CAGNNNCTG 1 cut(s) 802
PsuI RGATCY 3 cut(s) 40, 1323, 1649
PsyI GACNNNGTC 1 cut(s) 990
PvuII CAGCTG 2 cut(s) 1472, 1748
RsaI GTAC 4 cut(s) 244, 1498, 1611, 1660
RsaNI GTAC 4 cut(s) 243, 1497, 1610, 1659
RseI CAYNNNNRTG 3 cut(s) 309, 1145, 1807
Rsr2I CGGWCCG 1 cut(s) 996
RsrII CGGWCCG 1 cut(s) 996
SacI GAGCTC 1 cut(s) 1742
SapI GCTCTTC 1 cut(s) 607
SaqAI TTAA 7 cut(s) 453, 476, 653, 897, 975, 1359, 1562
SatI GCNGC 8 cut(s) 10, 72, 75, 78, 1292, 1470, 1473, 1482
Sau96I GGNCC 3 cut(s) 858, 996, 1243
ScaI AGTACT 1 cut(s) 244
SchI GAGTC 4 cut(s) 616, 838, 1392, 1850
ScrFI CCNGG 4 cut(s) 144, 627, 857, 965
SduI GDGCHC 3 cut(s) 119, 217, 1742
SfaNI GCATC 3 cut(s) 415, 1006, 1141
SfcI CTRYAG 1 cut(s) 1743
SinI GGWCC 2 cut(s) 996, 1243
SmiMI CAYNNNNRTG 3 cut(s) 309, 1145, 1807
SmlI CTYRAG 4 cut(s) 937, 1220, 1561, 1717
SmoI CTYRAG 4 cut(s) 937, 1220, 1561, 1717
SspI AATATT 1 cut(s) 551
SspMI CTAG 7 cut(s) 81, 365, 594, 680, 1379, 1422, 1936
SstI GAGCTC 1 cut(s) 1742
StyD4I CCNGG 4 cut(s) 142, 625, 855, 963
StyI CCWWGG 6 cut(s) 410, 950, 1109, 1174, 1246, 1334
TaaI ACNGT 4 cut(s) 242, 247, 804, 1806
TaiI ACGT 5 cut(s) 672, 886, 973, 1309, 1432
TaqI TCGA 7 cut(s) 148, 155, 558, 573, 787, 1407, 1464
TatI WGTACW 2 cut(s) 242, 1658
TfiI GAWTC 3 cut(s) 942, 1751, 1847
Tru1I TTAA 7 cut(s) 453, 476, 653, 897, 975, 1359, 1562
Tru9I TTAA 7 cut(s) 453, 476, 653, 897, 975, 1359, 1562
TscAI CASTG 1 cut(s) 231
TseFI GTSAC 3 cut(s) 496, 841, 1619
TseI GCWGC 8 cut(s) 9, 71, 74, 77, 1291, 1469, 1472, 1481
Tsp45I GTSAC 3 cut(s) 496, 841, 1619
TspDTI ATGAA 9 cut(s) 594, 806, 1139, 1518, 1581, 1605, 1722, 1779, 1874
TspGWI ACGGA 2 cut(s) 501, 1894
TspRI CASTG 1 cut(s) 231
Tth111I GACNNNGTC 1 cut(s) 990
Van91I CCANNNNNTGG 2 cut(s) 27, 1685
Vha464I CTTAAG 1 cut(s) 1561
VpaK11BI GGWCC 2 cut(s) 996, 1243
XapI RAATTY 4 cut(s) 369, 659, 875, 1256
XmiI GTMKAC 1 cut(s) 105
XmnI GAANNNNTTC 3 cut(s) 773, 1130, 1539
XspI CTAG 7 cut(s) 81, 365, 594, 680, 1379, 1422, 1936
ZrmI AGTACT 1 cut(s) 244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.