Rmu_sc0008339.1_g000024

FAD binding domain of DNA photolyase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008339.1
OG0006855
Physical Location & Seq
Forward (+)
92758 .. 97243
4486 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008339.1_g000024.1.cds

Sequence Viewer

Length: 2013 bp
atgaactgttctttgaatcttgttgattatgggacatgtaggttacgctcaattggtgcagagaaagtgaattataggatgggtagcagcaataagaccatagtttggtttaggagggacctgaggatcgaggacaatccagccttagctgctgctgctagggatggtgctgtctttcctgtttacatatggtgcccgaaagacgaaggacagttctaccccggtcgagtttcgcggtggtggctgaagcagtctcttgctcacttggatcagtccttgaagtctcttggcgctcaacttgtgctgatcaaaacccacagtacactctctgctctcttggaatgcattcaagctattggagccacaaaagtagtgttcaaccatctatatgatcctgtttcactcgtgtgtgatcacaacatcaagggaaagctggtagagctaggagtttctgtgcaaagctataatgcagatttgttgtacgagccatgggaagtatatgatgcaaaaggacaaacatttacaacgtttaaggcatactgggacaagtgcttagacatggaaagggaacttgtgacatttcttcctccctggaaattattgcccgcaacaggaacggtggcgaaatgttcaatcgaagaattgggtctcgaaaatgaaacagaaaaatctagcaatgccctcttaggaagagcatggactccaggctggagccaagctgataaagctttaaatgaattctttgatgggcacctgctagactatgcaaagaacaggacaaaacttgggggcaactcaacatcactgttgtctccatatcttcactttggagaagtgagtgtgaggaaagttttccagatagctcgaatgaagcagatactgtttgcaaaagaagggaactctctaggtgaagagagtgtgactctttttctccgggccattgggcttagagaatactcgcgctatctttgttttaactttccattctcccatgagaaatcactgctgagcaacttgagattctttccatggcaagctgaccaggatcgttttaaggcttggagacaaggtcggaccggctaccctttagttgatgcaggaatgagagagctttgggcaactgggtggattcacaacagaataagagtgattgtttcaagttttgctgtgaaagttttgcttcttccttggaaatggggaatgaagtatttctgggacacgcttatggatgcagacttggaaagtgatatccttggttggcagtatatctcagggagcttaccagatggccatgagcttgagcgtttggatagtccagaggtccaaggctcaaaatttgatccagagggtgaatatgtaaggcaatggctgcctgagttatcacgtttaccaactgagtggatccatcatccttgggacacgcccgataaagtgcttaaagtttcaggagtagagctaggagtcaactatccgagacctataatcgagatagatttggctagagaacatttgactaaagccatattcaagatgtgggaaatggaagcagctgcaaaggctgcaaacctgaatggtacaaatgaagttgttgttgataactctgatgggattgaaaacttgccgatcccaaaggtgatcttaaggaacaacactccttgtgctacttattcatctaatgatcagaaggtacctacatgtcacaattcagagggaaatcaattgaagaagagatccagatttacacaaggagaacggccactaccagataatgggcagagtcctaatcctaatgaagccacctcaagaacaattgaagacatgaactctacagctgaatcttcaatgtctaagaagcagacaaccagcagaacttcattttctgttccacagtcatcttcctcatcaaaagccaacccttttatggagtctgaatcttctgaaatgaagcagtcatggcaagaacggagcgacatggaacagagttcaagcaaagatagagctgttgaagattaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000166 GO:0001101 GO:0002252 GO:0002376 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005773 GO:0006139 GO:0006325 GO:0006338 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006873 GO:0006874 GO:0006875 GO:0006950 GO:0006952 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0007623 GO:0008144 GO:0008150 GO:0008152 GO:0009117 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009606 GO:0009607 GO:0009615 GO:0009628 GO:0009637 GO:0009638 GO:0009642 GO:0009645 GO:0009646 GO:0009648 GO:0009719 GO:0009725 GO:0009785 GO:0009791 GO:0009881 GO:0009882 GO:0009888 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010033 GO:0010035 GO:0010073 GO:0010075 GO:0010118 GO:0010228 GO:0010244 GO:0010617 GO:0014070 GO:0016043 GO:0016604 GO:0017076 GO:0019222 GO:0019637 GO:0019725 GO:0022414 GO:0022603 GO:0023052 GO:0030003 GO:0030522 GO:0030554 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0033993 GO:0034641 GO:0035639 GO:0036094 GO:0038023 GO:0040008 GO:0042221 GO:0042592 GO:0042726 GO:0042752 GO:0042802 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048037 GO:0048507 GO:0048509 GO:0048511 GO:0048518 GO:0048522 GO:0048571 GO:0048573 GO:0048574 GO:0048580 GO:0048582 GO:0048583 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048856 GO:0048878 GO:0050660 GO:0050662 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051094 GO:0051186 GO:0051239 GO:0051240 GO:0051276 GO:0051480 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055086 GO:0060089 GO:0061458 GO:0065007 GO:0065008 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071949 GO:0072387 GO:0072503 GO:0072507 GO:0097159 GO:0097367 GO:0098542 GO:0098771 GO:0104004 GO:1900618 GO:1901265 GO:1901360 GO:1901363 GO:1901371 GO:1901564 GO:1901700 GO:1902347 GO:1905421 GO:2000024 GO:2000026 GO:2000028 GO:2000241 GO:2000243 GO:2000377 GO:2000379
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
DNA_photolyase FAD_binding_7

Protein Analysis

670

Amino Acids

76.06

Weight (kDa)

6.18

Isoelectric Point (pI)

44.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 762
Acc36I ACCTGC 1 cut(s) 762
Acc65I GGTACC 1 cut(s) 1687
AccB1I GGYRCC 3 cut(s) 192, 750, 1687
AccB7I CCANNNNNTGG 2 cut(s) 105, 1769
AccII CGCG 2 cut(s) 235, 961
AciI CCGC 2 cut(s) 235, 606
AclI AACGTT 1 cut(s) 527
AclWI GGATC 9 cut(s) 134, 276, 386, 1053, 1334, 1396, 1409, 1618, 1725
AcoI YGGCCR 2 cut(s) 1288, 1754
AcsI RAATTY 2 cut(s) 737, 1334
AcuI CTGAAG 1 cut(s) 266
AfaI GTAC 4 cut(s) 322, 482, 1576, 1689
AfiI CCNNNNNNNGG 4 cut(s) 105, 611, 1769, 1921
AflII CTTAAG 1 cut(s) 1639
AflIII ACRYGT 2 cut(s) 35, 1694
AjnI CCWGG 3 cut(s) 590, 703, 1041
AleI CACNNNNGTG 1 cut(s) 406
Alw26I GTCTC 6 cut(s) 258, 288, 653, 816, 1057, 1468
AlwI GGATC 9 cut(s) 134, 276, 386, 1053, 1334, 1396, 1409, 1618, 1725
AlwNI CAGNNNCTG 1 cut(s) 880
AoxI GGCC 3 cut(s) 936, 1288, 1754
ApeKI GCWGC 8 cut(s) 87, 149, 152, 155, 1369, 1547, 1550, 1559
ApoI RAATTY 2 cut(s) 737, 1334
Asp700I GAANNNNTTC 3 cut(s) 345, 851, 1208
Asp718I GGTACC 1 cut(s) 1687
AspLEI GCGC 2 cut(s) 293, 963
AspS9I GGNCC 4 cut(s) 118, 936, 1074, 1321
AsuC2I CCSGG 2 cut(s) 222, 935
AsuHPI GGTGA 3 cut(s) 920, 1361, 1645
AvaII GGWCC 3 cut(s) 118, 1074, 1321
AxyI CCTNAGG 1 cut(s) 122
BaeGI GKGCMC 2 cut(s) 197, 753
BalI TGGCCA 1 cut(s) 1290
BamHI GGATCC 1 cut(s) 1401
BanI GGYRCC 3 cut(s) 192, 750, 1687
BauI CACGAG 1 cut(s) 404
BbsI GAAGAC 1 cut(s) 1821
BbvI GCAGC 8 cut(s) 99, 136, 139, 142, 1356, 1537, 1546, 1559
BccI CCATC 7 cut(s) 73, 158, 390, 740, 1280, 1413, 1598
BceAI ACGGC 1 cut(s) 1769
BciT130I CCWGG 3 cut(s) 592, 705, 1043
BclI TGATCA 3 cut(s) 306, 412, 1678
BcnI CCSGG 2 cut(s) 222, 935
BcoDI GTCTC 6 cut(s) 258, 288, 653, 816, 1057, 1468
BfaI CTAG 7 cut(s) 159, 443, 672, 758, 905, 1457, 1500
BfmI CTRYAG 1 cut(s) 1827
BfoI RGCGCY 1 cut(s) 294
BfrI CTTAAG 1 cut(s) 1639
BfuAI ACCTGC 1 cut(s) 762
BisI GCNGC 8 cut(s) 88, 150, 153, 156, 1370, 1548, 1551, 1560
BlpI GCTNAGC 1 cut(s) 1007
BlsI GCNGC 8 cut(s) 89, 151, 154, 157, 1371, 1549, 1552, 1561
Bme1390I CCNGG 5 cut(s) 222, 592, 705, 935, 1043
Bme18I GGWCC 3 cut(s) 118, 1074, 1321
BmgT120I GGNCC 4 cut(s) 118, 936, 1074, 1321
BmiI GGNNCC 7 cut(s) 119, 194, 361, 713, 752, 1403, 1689
BmrFI CCNGG 5 cut(s) 222, 592, 705, 935, 1043
BmrI ACTGGG 2 cut(s) 550, 1131
BmsI GCATC 3 cut(s) 493, 1084, 1219
BmuI ACTGGG 2 cut(s) 550, 1131
BpiI GAAGAC 1 cut(s) 1821
BplI GAGNNNNNCTC 2 cut(s) 907, 939
BpmI CTGGAG 2 cut(s) 687, 730
Bpu10I CCTNAGC 1 cut(s) 145
Bpu1102I GCTNAGC 1 cut(s) 1007
BpuEI CTTGAG 3 cut(s) 1036, 1319, 1786
BpuMI CCSGG 2 cut(s) 222, 935
BsaI GGTCTC 2 cut(s) 653, 1468
BsaJI CCNNGG 8 cut(s) 220, 488, 590, 1028, 1187, 1252, 1324, 1412
BsaXI ACNNNNNCTCC 4 cut(s) 438, 468, 1054, 1084
Bsc4I CCNNNNNNNGG 4 cut(s) 105, 611, 1769, 1921
Bse118I RCCGGY 1 cut(s) 1076
Bse1I ACTGG 2 cut(s) 545, 1126
Bse21I CCTNAGG 1 cut(s) 122
Bse3DI GCAATG 2 cut(s) 682, 1370
BseBI CCWGG 3 cut(s) 592, 705, 1043
BseDI CCNNGG 8 cut(s) 220, 488, 590, 1028, 1187, 1252, 1324, 1412
BseGI GGATG 4 cut(s) 84, 169, 1234, 1408
BseLI CCNNNNNNNGG 4 cut(s) 105, 611, 1769, 1921
BseMI GCAATG 2 cut(s) 682, 1370
BseMII CTCAG 5 cut(s) 113, 998, 1284, 1365, 1386
BseNI ACTGG 2 cut(s) 545, 1126
BseSI GKGCMC 2 cut(s) 197, 753
BseXI GCAGC 8 cut(s) 99, 136, 139, 142, 1356, 1537, 1546, 1559
BsgI GTGCAG 1 cut(s) 78
Bsh1236I CGCG 2 cut(s) 235, 961
Bsh1285I CGRYCG 1 cut(s) 226
BshFI GGCC 3 cut(s) 938, 1290, 1756
BshNI GGYRCC 3 cut(s) 192, 750, 1687
BsiEI CGRYCG 1 cut(s) 226
BsiSI CCGG 3 cut(s) 222, 934, 1077
BslFI GGGAC 5 cut(s) 46, 131, 557, 1229, 1430
BslI CCNNNNNNNGG 4 cut(s) 105, 611, 1769, 1921
BsmAI GTCTC 6 cut(s) 258, 288, 653, 816, 1057, 1468
BsmFI GGGAC 5 cut(s) 46, 131, 557, 1229, 1430
BsmI GAATGC 2 cut(s) 345, 347
BsnI GGCC 3 cut(s) 938, 1290, 1756
Bso31I GGTCTC 2 cut(s) 653, 1468
Bsp1286I GDGCHC 2 cut(s) 197, 753
Bsp1720I GCTNAGC 1 cut(s) 1007
Bsp19I CCATGG 2 cut(s) 488, 1028
BspACI CCGC 2 cut(s) 235, 606
BspANI GGCC 3 cut(s) 938, 1290, 1756
BspCNI CTCAG 5 cut(s) 114, 999, 1283, 1366, 1387
BspFNI CGCG 2 cut(s) 235, 961
BspLI GGNNCC 7 cut(s) 119, 194, 361, 713, 752, 1403, 1689
BspMI ACCTGC 1 cut(s) 762
BspPI GGATC 9 cut(s) 134, 276, 386, 1053, 1334, 1396, 1409, 1618, 1725
BspQI GCTCTTC 1 cut(s) 685
BspT107I GGYRCC 3 cut(s) 192, 750, 1687
BspTI CTTAAG 1 cut(s) 1639
BspTNI GGTCTC 2 cut(s) 653, 1468
BsrDI GCAATG 2 cut(s) 682, 1370
BsrFI RCCGGY 1 cut(s) 1076
BsrI ACTGG 2 cut(s) 545, 1126
BssAI RCCGGY 1 cut(s) 1076
BssECI CCNNGG 8 cut(s) 220, 488, 590, 1028, 1187, 1252, 1324, 1412
BssSI CACGAG 1 cut(s) 404
BssT1I CCWWGG 6 cut(s) 488, 1028, 1187, 1252, 1324, 1412
Bst2BI CACGAG 1 cut(s) 404
Bst2UI CCWGG 3 cut(s) 592, 705, 1043
Bst4CI ACNGT 7 cut(s) 8, 213, 320, 619, 807, 882, 1890
Bst6I CTCTTC 3 cut(s) 685, 906, 1721
BstAFI CTTAAG 1 cut(s) 1639
BstAPI GCANNNNNTGC 2 cut(s) 1369, 1559
BstC8I GCNNGC 2 cut(s) 606, 1035
BstDSI CCRYGG 2 cut(s) 488, 1028
BstF5I GGATG 4 cut(s) 84, 169, 1234, 1408
BstFNI CGCG 2 cut(s) 235, 961
BstH2I RGCGCY 1 cut(s) 294
BstHHI GCGC 2 cut(s) 293, 963
BstMAI GTCTC 6 cut(s) 258, 288, 653, 816, 1057, 1468
BstMCI CGRYCG 1 cut(s) 226
BstNI CCWGG 3 cut(s) 592, 705, 1043
BstNSI RCATGY 2 cut(s) 39, 1698
BstSCI CCNGG 5 cut(s) 220, 590, 703, 933, 1041
BstSFI CTRYAG 1 cut(s) 1827
BstSLI GKGCMC 2 cut(s) 197, 753
BstUI CGCG 2 cut(s) 235, 961
BstV1I GCAGC 8 cut(s) 99, 136, 139, 142, 1356, 1537, 1546, 1559
BstV2I GAAGAC 1 cut(s) 1821
BstX2I RGATCY 2 cut(s) 1401, 1730
BstXI CCANNNNNNTGG 1 cut(s) 1398
BstYI RGATCY 2 cut(s) 1401, 1730
Bsu36I CCTNAGG 1 cut(s) 122
BsuRI GGCC 3 cut(s) 938, 1290, 1756
BtgI CCRYGG 2 cut(s) 488, 1028
BtsCI GGATG 4 cut(s) 84, 169, 1234, 1408
BtsI GCAGTG 1 cut(s) 1001
BtsIMutI CAGTG 2 cut(s) 803, 1001
BveI ACCTGC 1 cut(s) 762
Cac8I GCNNGC 2 cut(s) 606, 1035
CaiI CAGNNNCTG 1 cut(s) 880
CfoI GCGC 2 cut(s) 293, 963
Cfr10I RCCGGY 1 cut(s) 1076
Cfr13I GGNCC 4 cut(s) 118, 936, 1074, 1321
CpoI CGGWCCG 1 cut(s) 1074
Csp6I GTAC 4 cut(s) 321, 481, 1575, 1688
CspI CGGWCCG 1 cut(s) 1074
CviQI GTAC 4 cut(s) 321, 481, 1575, 1688
DraI TTTAAA 1 cut(s) 732
EaeI YGGCCR 2 cut(s) 1288, 1754
Eam1104I CTCTTC 3 cut(s) 685, 906, 1721
EarI CTCTTC 3 cut(s) 685, 906, 1721
Eco130I CCWWGG 6 cut(s) 488, 1028, 1187, 1252, 1324, 1412
Eco31I GGTCTC 2 cut(s) 653, 1468
Eco32I GATATC 1 cut(s) 1249
Eco47I GGWCC 3 cut(s) 118, 1074, 1321
Eco57I CTGAAG 1 cut(s) 266
Eco81I CCTNAGG 1 cut(s) 122
EcoO109I RGGNCCY 1 cut(s) 118
EcoRI GAATTC 1 cut(s) 737
EcoRII CCWGG 3 cut(s) 590, 703, 1041
EcoRV GATATC 1 cut(s) 1249
EcoT14I CCWWGG 6 cut(s) 488, 1028, 1187, 1252, 1324, 1412
EcoT22I ATGCAT 1 cut(s) 347
ErhI CCWWGG 6 cut(s) 488, 1028, 1187, 1252, 1324, 1412
FalI AAGNNNNNCTT 4 cut(s) 1164, 1196, 1622, 1654
FaqI GGGAC 5 cut(s) 46, 131, 557, 1229, 1430
FauI CCCGC 1 cut(s) 613
FauNDI CATATG 1 cut(s) 188
FbaI TGATCA 3 cut(s) 306, 412, 1678
Fnu4HI GCNGC 8 cut(s) 88, 150, 153, 156, 1370, 1548, 1551, 1560
FokI GGATG 4 cut(s) 91, 176, 1241, 1395
Fsp4HI GCNGC 8 cut(s) 88, 150, 153, 156, 1370, 1548, 1551, 1560
FspBI CTAG 7 cut(s) 159, 443, 672, 758, 905, 1457, 1500
GlaI GCGC 2 cut(s) 292, 962
GluI GCNGC 8 cut(s) 88, 150, 153, 156, 1370, 1548, 1551, 1560
GsuI CTGGAG 2 cut(s) 687, 730
HaeII RGCGCY 1 cut(s) 294
HaeIII GGCC 3 cut(s) 938, 1290, 1756
HapII CCGG 3 cut(s) 222, 934, 1077
HhaI GCGC 2 cut(s) 293, 963
Hin6I GCGC 2 cut(s) 291, 961
HinP1I GCGC 2 cut(s) 291, 961
HincII GTYRAC 1 cut(s) 1465
HindII GTYRAC 1 cut(s) 1465
HindIII AAGCTT 1 cut(s) 726
HpaII CCGG 3 cut(s) 222, 934, 1077
HphI GGTGA 3 cut(s) 920, 1361, 1645
Hpy166II GTNNAC 4 cut(s) 184, 323, 1388, 1465
Hpy188I TCNGA 7 cut(s) 1074, 1473, 1603, 1683, 1708, 1930, 1939
Hpy188III TCNNGA 9 cut(s) 650, 856, 1316, 1343, 1446, 1486, 1528, 1734, 1803
Hpy8I GTNNAC 4 cut(s) 184, 323, 1388, 1465
HpyAV CCTTC 3 cut(s) 200, 887, 1678
HpyCH4III ACNGT 7 cut(s) 8, 213, 320, 619, 807, 882, 1890
HpyCH4IV ACGT 2 cut(s) 527, 1384
HpySE526I ACGT 2 cut(s) 527, 1384
HspAI GCGC 2 cut(s) 291, 961
KpnI GGTACC 1 cut(s) 1691
Ksp22I TGATCA 3 cut(s) 306, 412, 1678
LguI GCTCTTC 1 cut(s) 685
LmnI GCTCC 4 cut(s) 359, 711, 1275, 1965
Lsp1109I GCAGC 8 cut(s) 99, 136, 139, 142, 1356, 1537, 1546, 1559
LweI GCATC 3 cut(s) 493, 1084, 1219
MaeI CTAG 7 cut(s) 159, 443, 672, 758, 905, 1457, 1500
MaeII ACGT 2 cut(s) 527, 1384
MaeIII GTNAC 4 cut(s) 42, 574, 919, 1697
MfeI CAATTG 3 cut(s) 51, 1718, 1809
MflI RGATCY 2 cut(s) 1401, 1730
MhlI GDGCHC 2 cut(s) 197, 753
MlsI TGGCCA 1 cut(s) 1290
MluCI AATT 9 cut(s) 51, 70, 596, 641, 737, 1334, 1702, 1718, 1809
MluNI TGGCCA 1 cut(s) 1290
MlyI GAGTC 5 cut(s) 694, 916, 1470, 1786, 1934
MmeI TCCRAC 1 cut(s) 1052
Mox20I TGGCCA 1 cut(s) 1290
Mph1103I ATGCAT 1 cut(s) 347
MroXI GAANNNNTTC 3 cut(s) 345, 851, 1208
MscI TGGCCA 1 cut(s) 1290
MseI TTAA 7 cut(s) 531, 731, 975, 1053, 1437, 1640, 2011
MslI CAYNNNNRTG 3 cut(s) 387, 406, 1223
Msp20I TGGCCA 1 cut(s) 1290
MspA1I CMGCKG 2 cut(s) 1550, 1832
MspCI CTTAAG 1 cut(s) 1639
MspI CCGG 3 cut(s) 222, 934, 1077
MspR9I CCNGG 5 cut(s) 222, 592, 705, 935, 1043
MunI CAATTG 3 cut(s) 51, 1718, 1809
Mva1269I GAATGC 2 cut(s) 345, 347
MvaI CCWGG 3 cut(s) 592, 705, 1043
MvnI CGCG 2 cut(s) 235, 961
NciI CCSGG 2 cut(s) 222, 935
NcoI CCATGG 2 cut(s) 488, 1028
NdeI CATATG 1 cut(s) 188
NlaIV GGNNCC 7 cut(s) 119, 194, 361, 713, 752, 1403, 1689
NmuCI GTSAC 3 cut(s) 574, 919, 1697
NsiI ATGCAT 1 cut(s) 347
NspI RCATGY 2 cut(s) 39, 1698
OliI CACNNNNGTG 1 cut(s) 406
PaqCI CACCTGC 1 cut(s) 762
PciI ACATGT 2 cut(s) 35, 1694
PciSI GCTCTTC 1 cut(s) 685
PctI GAATGC 2 cut(s) 345, 347
PdmI GAANNNNTTC 3 cut(s) 345, 851, 1208
PfeI GAWTC 5 cut(s) 16, 1020, 1129, 1835, 1931
PflFI GACNNNGTC 1 cut(s) 1068
PflMI CCANNNNNTGG 2 cut(s) 105, 1769
PkrI GCNGC 8 cut(s) 89, 151, 154, 157, 1371, 1549, 1552, 1561
PleI GAGTC 5 cut(s) 694, 916, 1469, 1785, 1933
PpsI GAGTC 5 cut(s) 694, 916, 1469, 1785, 1933
PpuMI RGGWCCY 1 cut(s) 118
PscI ACATGT 2 cut(s) 35, 1694
Psp1406I AACGTT 1 cut(s) 527
Psp5II RGGWCCY 1 cut(s) 118
Psp6I CCWGG 3 cut(s) 590, 703, 1041
PspGI CCWGG 3 cut(s) 590, 703, 1041
PspN4I GGNNCC 7 cut(s) 119, 194, 361, 713, 752, 1403, 1689
PspPI GGNCC 4 cut(s) 118, 936, 1074, 1321
PspPPI RGGWCCY 1 cut(s) 118
PsrI GAACNNNNNNTAC 2 cut(s) 1743, 1775
PstNI CAGNNNCTG 1 cut(s) 880
PsuI RGATCY 2 cut(s) 1401, 1730
PsyI GACNNNGTC 1 cut(s) 1068
PvuII CAGCTG 2 cut(s) 1550, 1832
RsaI GTAC 4 cut(s) 322, 482, 1576, 1689
RsaNI GTAC 4 cut(s) 321, 481, 1575, 1688
RseI CAYNNNNRTG 3 cut(s) 387, 406, 1223
Rsr2I CGGWCCG 1 cut(s) 1074
RsrII CGGWCCG 1 cut(s) 1074
SapI GCTCTTC 1 cut(s) 685
SaqAI TTAA 7 cut(s) 531, 731, 975, 1053, 1437, 1640, 2011
SatI GCNGC 8 cut(s) 88, 150, 153, 156, 1370, 1548, 1551, 1560
Sau96I GGNCC 4 cut(s) 118, 936, 1074, 1321
SchI GAGTC 5 cut(s) 694, 916, 1470, 1786, 1934
ScrFI CCNGG 5 cut(s) 222, 592, 705, 935, 1043
SduI GDGCHC 2 cut(s) 197, 753
SfaNI GCATC 3 cut(s) 493, 1084, 1219
SfcI CTRYAG 1 cut(s) 1827
SinI GGWCC 3 cut(s) 118, 1074, 1321
SmiMI CAYNNNNRTG 3 cut(s) 387, 406, 1223
SmlI CTYRAG 4 cut(s) 1015, 1298, 1639, 1801
SmoI CTYRAG 4 cut(s) 1015, 1298, 1639, 1801
Sse9I AATT 9 cut(s) 51, 70, 596, 641, 737, 1334, 1702, 1718, 1809
SsiI CCGC 2 cut(s) 235, 606
SspMI CTAG 7 cut(s) 159, 443, 672, 758, 905, 1457, 1500
StyD4I CCNGG 5 cut(s) 220, 590, 703, 933, 1041
StyI CCWWGG 6 cut(s) 488, 1028, 1187, 1252, 1324, 1412
TaaI ACNGT 7 cut(s) 8, 213, 320, 619, 807, 882, 1890
TaiI ACGT 2 cut(s) 530, 1387
TaqI TCGA 6 cut(s) 129, 226, 636, 651, 865, 1485
TasI AATT 9 cut(s) 51, 70, 596, 641, 737, 1334, 1702, 1718, 1809
TatI WGTACW 1 cut(s) 320
TfiI GAWTC 5 cut(s) 16, 1020, 1129, 1835, 1931
Tru1I TTAA 7 cut(s) 531, 731, 975, 1053, 1437, 1640, 2011
Tru9I TTAA 7 cut(s) 531, 731, 975, 1053, 1437, 1640, 2011
TscAI CASTG 2 cut(s) 810, 1008
TseFI GTSAC 3 cut(s) 574, 919, 1697
TseI GCWGC 8 cut(s) 87, 149, 152, 155, 1369, 1547, 1550, 1559
Tsp45I GTSAC 3 cut(s) 574, 919, 1697
TspGWI ACGGA 1 cut(s) 1978
TspRI CASTG 2 cut(s) 810, 1008
Tth111I GACNNNGTC 1 cut(s) 1068
Van91I CCANNNNNTGG 2 cut(s) 105, 1769
Vha464I CTTAAG 1 cut(s) 1639
VpaK11BI GGWCC 3 cut(s) 118, 1074, 1321
XapI RAATTY 2 cut(s) 737, 1334
XceI RCATGY 2 cut(s) 39, 1698
XcmI CCANNNNNNNNNTGG 1 cut(s) 1918
XmnI GAANNNNTTC 3 cut(s) 345, 851, 1208
XspI CTAG 7 cut(s) 159, 443, 672, 758, 905, 1457, 1500
Zsp2I ATGCAT 1 cut(s) 347
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.