pycom13g18650

FAD binding domain of DNA photolyase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0006855
Physical Location & Seq
Reverse (-)
14717375 .. 14720574
3200 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g18650.3

Sequence Viewer

Length: 1944 bp
ATGAGTGGCGATAAGACTATAGTTTGGTTTAGGAGGGACCTAAGGATTGAGGACAATCCTGCATTAGCAGCTGCTGCTAGGGATGGTAGTGTTTTCCCTGTTTATATATGGTGCCCCAAAGAGGAAGAGCAATTTTACCCGGGTCGAGTATCACGGTGGTGGCTGAAGCAGTCTCTTGCTCACTTGGACCAGTCCCTGAAATCCCTTGGGGCAGAACTTGTGCTTATCAAAACTCAGAGTACTCTTGCTGCTCTCTTGGAGTGCATTCAAGCCATTGGAGCTACCAAAGTAGTTTTCAACCATCTTTATGATCCCGTTTCACTTGTTGGCGATCACAACATCAAAGGAAAGCTGGTGGAGCTAGGCATTTCTGTGCAAAGCTTCAATGTAGATCTGTTGTATGAGCCATGGGAAATATATGCTGGAAAAGGACAAGCTTATACAACTTTCGAGGCATACTGGGATAAGTGCTTACACATGCAACGGGAACTTGTGACACGTCTTCCTCCTTGGAAATTGATTTCGGCAACAGTGATAGGAACTGTAACAAAATGTTCACTCGAGGAACTGGGTCTCGAAAATGAAACGGAAAAGTCTAGCAATGCCCTCCTAAGAAGAGCATGGTCTCCAGGTTGGAGCAATGCTGACAAGGCTCTAAGTGAATTTTTTGAGTTGCACCTGCTTGACTACTCAAACAACAGGATGAAGGTTGGACAAAACTCCACATCACTTTTGTCCCCATATGTTCACTTCGGAGAATTAAGCGTGAGGAAAGTTTTCCAATCAGCTCGAATGAAGCAGATACTGTGGGCAAAAGAAGGGAACTGTACCGGGGAAGAGAGTGTGACACTTTTTCTGAGGGCCATTGGGCTTAGAGAATACTCACGGTATCTATGTTTTAACTTCCCGTTCACTCATGAGAGACCACTGCTGAGCAACTTGAAGTTTTTTCCATGGCAAGCTGACCAAGCCAATTTTAAGGCTTGGAGACAAGGTCGGACCGGTTACCCTTTGGTTGATGCAGGAATGAGAGAGTTATGGGCAACTGGGTGGATACACAACAGGATAAGAGTGATCGTTTCAAGTTTTGCTGTGAAAGTGTTGCTTCTTCCTTGGAGATGGGGAATGAAGTATTTCTGGGATACGCTTATAGATGCCGATTTGGAAAGCGATATCCTTGGTTGGCAGTATATCTCTGGGAGTTTACCAGATGGCCATGAGCTTGAGCGTTTGGACAGTCCAGAGGTTCAGGGCTCAAAATTTGACCCAGAGGGTGAATATGTAAGGCATTGGCTGCCTGAGTTATCACGTTTGCCAACCGAGTGGATCCACCATCCTTGGGATGCACCTGATTCTGTTCTTAAAGTTTCAGGTGTAGAGTTTGGGTTTAACTATCCTAAACCTATCATTGAGATAGATTTGGCTAGGGAACGCTTGACGAGCGCCATATTCAAGATGTGGGAAATGGAAGCAGCAGCAAGGGCTGCAAGCACAAATGGCACAGATGAAGTTGTTGTTGACAACTCCATCAGTGAAGATTTGCCCATTCCAAAGGTGATATTAAAGAAAACCTCTCCTTGTCCTACATACTCCTCTAATGATCAGAAGGTACCGACATGTCAAAATTCCAAGAATAATCAGTTTATTAGGAAAAGATCAAAATTTATGCAAGACGAAAGCCCACTCCCAGATAATCCGCACAATCCTAACGAAGCTGGGCCCTCGAGAACAAATGAAGACACGAGCTCTACTGCTGAATCTTCAATCTCTAAGAAGCAGACAACTAGCAGAAATTCATTTACGGTTCCACAGTCATGTTCATCATCAGAAGGCAACCCCTTGATGGGGTGTGAATCTTCTGAGATGAAGCAGTCATGGCAAGAACAGAGTGATATGGAGCAGAGTTCAAGCAAAAATGGAGCCGTGGAAGATGAACACCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000166 GO:0001101 GO:0002252 GO:0002376 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005773 GO:0006139 GO:0006325 GO:0006338 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006873 GO:0006874 GO:0006875 GO:0006950 GO:0006952 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0007623 GO:0008144 GO:0008150 GO:0008152 GO:0009117 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009606 GO:0009607 GO:0009615 GO:0009628 GO:0009637 GO:0009638 GO:0009642 GO:0009645 GO:0009646 GO:0009648 GO:0009719 GO:0009725 GO:0009785 GO:0009791 GO:0009881 GO:0009882 GO:0009888 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010033 GO:0010035 GO:0010073 GO:0010075 GO:0010118 GO:0010228 GO:0010244 GO:0010617 GO:0014070 GO:0016043 GO:0016604 GO:0017076 GO:0019222 GO:0019637 GO:0019725 GO:0022414 GO:0022603 GO:0023052 GO:0030003 GO:0030522 GO:0030554 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0033993 GO:0034641 GO:0035639 GO:0036094 GO:0038023 GO:0040008 GO:0042221 GO:0042592 GO:0042726 GO:0042752 GO:0042802 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048037 GO:0048507 GO:0048509 GO:0048511 GO:0048518 GO:0048522 GO:0048571 GO:0048573 GO:0048574 GO:0048580 GO:0048582 GO:0048583 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048856 GO:0048878 GO:0050660 GO:0050662 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051094 GO:0051186 GO:0051239 GO:0051240 GO:0051276 GO:0051480 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055086 GO:0060089 GO:0061458 GO:0065007 GO:0065008 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071949 GO:0072387 GO:0072503 GO:0072507 GO:0097159 GO:0097367 GO:0098542 GO:0098771 GO:0104004 GO:1900618 GO:1901265 GO:1901360 GO:1901363 GO:1901371 GO:1901564 GO:1901700 GO:1902347 GO:1905421 GO:2000024 GO:2000026 GO:2000028 GO:2000241 GO:2000243 GO:2000377 GO:2000379
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
DNA_photolyase FAD_binding_7

Protein Analysis

648

Amino Acids

73.55

Weight (kDa)

5.67

Isoelectric Point (pI)

47.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 687
Acc36I ACCTGC 1 cut(s) 687
Acc65I GGTACC 1 cut(s) 1609
AccB1I GGYRCC 2 cut(s) 111, 1609
AciI CCGC 1 cut(s) 1697
AclWI GGATC 3 cut(s) 305, 1321, 1334
AcoI YGGCCR 1 cut(s) 1213
AcsI RAATTY 5 cut(s) 662, 1259, 1624, 1661, 1792
AcuI CTGAAG 1 cut(s) 185
AfaI GTAC 3 cut(s) 241, 829, 1611
AfiI CCNNNNNNNGG 5 cut(s) 121, 1339, 1843, 1844, 1845
AflIII ACRYGT 2 cut(s) 497, 1616
AgeI ACCGGT 1 cut(s) 1001
AgsI TTSAA 8 cut(s) 269, 298, 385, 943, 1083, 1453, 1764, 1908
AjiI CACGTC 1 cut(s) 500
AjnI CCWGG 1 cut(s) 628
AjuI GAANNNNNNNTTGG 2 cut(s) 278, 310
AleI CACNNNNGTG 1 cut(s) 157
Alw21I GWGCWC 1 cut(s) 1748
Alw26I GTCTC 5 cut(s) 177, 578, 630, 916, 982
AlwI GGATC 3 cut(s) 305, 1321, 1334
AlwNI CAGNNNCTG 3 cut(s) 74, 196, 805
Ama87I CYCGRG 3 cut(s) 139, 560, 1723
AoxI GGCC 3 cut(s) 861, 1213, 1718
ApaI GGGCCC 1 cut(s) 1722
ApeKI GCWGC 8 cut(s) 68, 71, 74, 248, 1294, 1472, 1475, 1484
ApoI RAATTY 5 cut(s) 662, 1259, 1624, 1661, 1792
AsiGI ACCGGT 1 cut(s) 1001
Asp700I GAANNNNTTC 2 cut(s) 776, 1133
Asp718I GGTACC 1 cut(s) 1609
AspLEI GCGC 1 cut(s) 1445
AspS9I GGNCC 6 cut(s) 37, 187, 861, 999, 1718, 1719
AsuC2I CCSGG 3 cut(s) 140, 141, 832
AsuHPI GGTGA 2 cut(s) 1286, 1567
AvaI CYCGRG 3 cut(s) 139, 560, 1723
AvaII GGWCC 3 cut(s) 37, 187, 999
AxyI CCTNAGG 1 cut(s) 41
BaeGI GKGCMC 2 cut(s) 116, 1722
BalI TGGCCA 1 cut(s) 1215
BamHI GGATCC 1 cut(s) 1326
BanI GGYRCC 2 cut(s) 111, 1609
BanII GRGCYC 3 cut(s) 1256, 1722, 1748
BauI CACGAG 1 cut(s) 1741
BbsI GAAGAC 2 cut(s) 494, 1743
Bbv12I GWGCWC 1 cut(s) 1748
BbvI GCAGC 8 cut(s) 58, 61, 80, 235, 1281, 1471, 1484, 1487
BccI CCATC 7 cut(s) 77, 309, 1113, 1205, 1341, 1535, 1837
BceAI ACGGC 1 cut(s) 1907
BciT130I CCWGG 1 cut(s) 630
BciVI GTATCC 2 cut(s) 1047, 1135
BclI TGATCA 1 cut(s) 1600
BcnI CCSGG 3 cut(s) 140, 141, 832
BcoDI GTCTC 5 cut(s) 177, 578, 630, 916, 982
BfaI CTAG 5 cut(s) 78, 362, 597, 1425, 1785
BfmI CTRYAG 1 cut(s) 18
BfoI RGCGCY 1 cut(s) 1446
BfuAI ACCTGC 1 cut(s) 687
BfuI GTATCC 2 cut(s) 1047, 1135
BglII AGATCT 1 cut(s) 391
BisI GCNGC 8 cut(s) 69, 72, 75, 249, 1295, 1473, 1476, 1485
BlpI GCTNAGC 1 cut(s) 932
BlsI GCNGC 8 cut(s) 70, 73, 76, 250, 1296, 1474, 1477, 1486
BmcAI AGTACT 1 cut(s) 241
Bme1390I CCNGG 4 cut(s) 140, 141, 630, 832
Bme18I GGWCC 3 cut(s) 37, 187, 999
BmeT110I CYCGRG 3 cut(s) 139, 560, 1723
BmgBI CACGTC 1 cut(s) 500
BmgT120I GGNCC 6 cut(s) 37, 187, 861, 999, 1718, 1719
BmiI GGNNCC 7 cut(s) 38, 113, 1328, 1611, 1720, 1806, 1921
BmrFI CCNGG 4 cut(s) 140, 141, 630, 832
BmrI ACTGGG 3 cut(s) 469, 578, 1056
BmsI GCATC 3 cut(s) 1009, 1144, 1333
BmuI ACTGGG 3 cut(s) 469, 578, 1056
BpiI GAAGAC 2 cut(s) 494, 1743
BpmI CTGGAG 1 cut(s) 612
Bpu1102I GCTNAGC 1 cut(s) 932
BpuEI CTTGAG 1 cut(s) 1244
BpuMI CCSGG 3 cut(s) 140, 141, 832
BsaI GGTCTC 3 cut(s) 578, 630, 916
BsaWI WCCGGW 1 cut(s) 1001
BsaXI ACNNNNNCTCC 2 cut(s) 979, 1009
Bsc4I CCNNNNNNNGG 5 cut(s) 121, 1339, 1843, 1844, 1845
Bse118I RCCGGY 1 cut(s) 1001
Bse1I ACTGG 4 cut(s) 190, 464, 573, 1051
Bse21I CCTNAGG 1 cut(s) 41
Bse3DI GCAATG 2 cut(s) 607, 646
BseBI CCWGG 1 cut(s) 630
BseGI GGATG 4 cut(s) 88, 708, 1333, 1348
BseLI CCNNNNNNNGG 5 cut(s) 121, 1339, 1843, 1844, 1845
BseMI GCAATG 2 cut(s) 607, 646
BseMII CTCAG 5 cut(s) 248, 848, 923, 1290, 1851
BseNI ACTGG 4 cut(s) 190, 464, 573, 1051
BseRI GAGGAG 1 cut(s) 1582
BseSI GKGCMC 2 cut(s) 116, 1722
BseXI GCAGC 8 cut(s) 58, 61, 80, 235, 1281, 1471, 1484, 1487
BseYI CCCAGC 1 cut(s) 1715
BshFI GGCC 3 cut(s) 863, 1215, 1720
BshNI GGYRCC 2 cut(s) 111, 1609
BshTI ACCGGT 1 cut(s) 1001
BsiHKAI GWGCWC 1 cut(s) 1748
BsiHKCI CYCGRG 3 cut(s) 139, 560, 1723
BsiSI CCGG 3 cut(s) 140, 831, 1002
BslFI GGGAC 3 cut(s) 50, 178, 721
BslI CCNNNNNNNGG 5 cut(s) 121, 1339, 1843, 1844, 1845
BsmAI GTCTC 5 cut(s) 177, 578, 630, 916, 982
BsmFI GGGAC 3 cut(s) 50, 178, 721
BsmI GAATGC 1 cut(s) 264
BsnI GGCC 3 cut(s) 863, 1215, 1720
Bso31I GGTCTC 3 cut(s) 578, 630, 916
BsoBI CYCGRG 3 cut(s) 139, 560, 1723
Bsp120I GGGCCC 1 cut(s) 1718
Bsp1286I GDGCHC 4 cut(s) 116, 1256, 1722, 1748
Bsp143I GATC 7 cut(s) 310, 331, 391, 1074, 1326, 1600, 1655
Bsp1720I GCTNAGC 1 cut(s) 932
Bsp19I CCATGG 2 cut(s) 407, 953
BspACI CCGC 1 cut(s) 1697
BspANI GGCC 3 cut(s) 863, 1215, 1720
BspCNI CTCAG 5 cut(s) 247, 849, 924, 1291, 1852
BspHI TCATGA 1 cut(s) 916
BspLI GGNNCC 7 cut(s) 38, 113, 1328, 1611, 1720, 1806, 1921
BspMI ACCTGC 1 cut(s) 687
BspPI GGATC 3 cut(s) 305, 1321, 1334
BspQI GCTCTTC 2 cut(s) 120, 610
BspT107I GGYRCC 2 cut(s) 111, 1609
BspTNI GGTCTC 3 cut(s) 578, 630, 916
BsrDI GCAATG 2 cut(s) 607, 646
BsrFI RCCGGY 1 cut(s) 1001
BsrI ACTGG 4 cut(s) 190, 464, 573, 1051
BssAI RCCGGY 1 cut(s) 1001
BssMI GATC 7 cut(s) 310, 331, 391, 1074, 1326, 1600, 1655
BssSI CACGAG 1 cut(s) 1741
BssT1I CCWWGG 7 cut(s) 205, 407, 509, 953, 1112, 1177, 1337
Bst2BI CACGAG 1 cut(s) 1741
Bst2UI CCWGG 1 cut(s) 630
Bst4CI ACNGT 9 cut(s) 156, 532, 544, 807, 827, 888, 1238, 1804, 1812
Bst6I CTCTTC 3 cut(s) 120, 610, 831
BstAPI GCANNNNNTGC 3 cut(s) 74, 1294, 1484
BstC8I GCNNGC 2 cut(s) 960, 1489
BstDSI CCRYGG 3 cut(s) 407, 953, 1923
BstEII GGTNACC 1 cut(s) 1004
BstF5I GGATG 4 cut(s) 88, 708, 1333, 1348
BstH2I RGCGCY 1 cut(s) 1446
BstHHI GCGC 1 cut(s) 1445
BstKTI GATC 7 cut(s) 313, 334, 394, 1077, 1329, 1603, 1658
BstMAI GTCTC 5 cut(s) 177, 578, 630, 916, 982
BstMBI GATC 7 cut(s) 310, 331, 391, 1074, 1326, 1600, 1655
BstNI CCWGG 1 cut(s) 630
BstNSI RCATGY 2 cut(s) 481, 1620
BstPI GGTNACC 1 cut(s) 1004
BstSCI CCNGG 4 cut(s) 138, 139, 628, 830
BstSFI CTRYAG 1 cut(s) 18
BstSLI GKGCMC 2 cut(s) 116, 1722
BstV1I GCAGC 8 cut(s) 58, 61, 80, 235, 1281, 1471, 1484, 1487
BstV2I GAAGAC 2 cut(s) 494, 1743
BstX2I RGATCY 2 cut(s) 391, 1326
BstXI CCANNNNNNTGG 1 cut(s) 1323
BstYI RGATCY 2 cut(s) 391, 1326
Bsu36I CCTNAGG 1 cut(s) 41
BsuI GTATCC 2 cut(s) 1047, 1135
BsuRI GGCC 3 cut(s) 863, 1215, 1720
BtgI CCRYGG 3 cut(s) 407, 953, 1923
BtrI CACGTC 1 cut(s) 500
BtsCI GGATG 4 cut(s) 88, 708, 1333, 1348
BtsI GCAGTG 1 cut(s) 926
BtsIMutI CAGTG 3 cut(s) 537, 926, 1537
BveI ACCTGC 1 cut(s) 687
Cac8I GCNNGC 2 cut(s) 960, 1489
CaiI CAGNNNCTG 3 cut(s) 74, 196, 805
CciI TCATGA 1 cut(s) 916
CfoI GCGC 1 cut(s) 1445
Cfr10I RCCGGY 1 cut(s) 1001
Cfr13I GGNCC 6 cut(s) 37, 187, 861, 999, 1718, 1719
Cfr9I CCCGGG 1 cut(s) 139
CpoI CGGWCCG 1 cut(s) 999
Csp6I GTAC 3 cut(s) 240, 828, 1610
CspAI ACCGGT 1 cut(s) 1001
CspCI CAANNNNNGTGG 2 cut(s) 1319, 1354
CspI CGGWCCG 1 cut(s) 999
CviAII CATG 9 cut(s) 408, 478, 621, 917, 954, 1217, 1617, 1815, 1875
CviQI GTAC 3 cut(s) 240, 828, 1610
DpnI GATC 7 cut(s) 312, 333, 393, 1076, 1328, 1602, 1657
DpnII GATC 7 cut(s) 310, 331, 391, 1074, 1326, 1600, 1655
EaeI YGGCCR 1 cut(s) 1213
Eam1104I CTCTTC 3 cut(s) 120, 610, 831
EarI CTCTTC 3 cut(s) 120, 610, 831
Ecl136II GAGCTC 1 cut(s) 1746
Eco130I CCWWGG 7 cut(s) 205, 407, 509, 953, 1112, 1177, 1337
Eco24I GRGCYC 3 cut(s) 1256, 1722, 1748
Eco31I GGTCTC 3 cut(s) 578, 630, 916
Eco32I GATATC 1 cut(s) 1174
Eco47I GGWCC 3 cut(s) 37, 187, 999
Eco53kI GAGCTC 1 cut(s) 1746
Eco57I CTGAAG 1 cut(s) 185
Eco81I CCTNAGG 1 cut(s) 41
Eco88I CYCGRG 3 cut(s) 139, 560, 1723
Eco91I GGTNACC 1 cut(s) 1004
EcoICRI GAGCTC 1 cut(s) 1746
EcoO109I RGGNCCY 2 cut(s) 37, 1719
EcoO65I GGTNACC 1 cut(s) 1004
EcoRII CCWGG 1 cut(s) 628
EcoRV GATATC 1 cut(s) 1174
EcoT14I CCWWGG 7 cut(s) 205, 407, 509, 953, 1112, 1177, 1337
EcoT38I GRGCYC 3 cut(s) 1256, 1722, 1748
ErhI CCWWGG 7 cut(s) 205, 407, 509, 953, 1112, 1177, 1337
FaeI CATG 9 cut(s) 411, 481, 624, 920, 957, 1220, 1620, 1818, 1878
FalI AAGNNNNNCTT 2 cut(s) 1089, 1121
FaqI GGGAC 3 cut(s) 50, 178, 721
FatI CATG 9 cut(s) 407, 477, 620, 916, 953, 1216, 1616, 1814, 1874
FauNDI CATATG 1 cut(s) 742
FbaI TGATCA 1 cut(s) 1600
Fnu4HI GCNGC 8 cut(s) 69, 72, 75, 249, 1295, 1473, 1476, 1485
FokI GGATG 4 cut(s) 95, 715, 1320, 1355
FriOI GRGCYC 3 cut(s) 1256, 1722, 1748
Fsp4HI GCNGC 8 cut(s) 69, 72, 75, 249, 1295, 1473, 1476, 1485
FspBI CTAG 5 cut(s) 78, 362, 597, 1425, 1785
GlaI GCGC 1 cut(s) 1444
GluI GCNGC 8 cut(s) 69, 72, 75, 249, 1295, 1473, 1476, 1485
GsaI CCCAGC 1 cut(s) 1719
GsuI CTGGAG 1 cut(s) 612
HaeII RGCGCY 1 cut(s) 1446
HaeIII GGCC 3 cut(s) 863, 1215, 1720
HapII CCGG 3 cut(s) 140, 831, 1002
HhaI GCGC 1 cut(s) 1445
Hin1II CATG 9 cut(s) 411, 481, 624, 920, 957, 1220, 1620, 1818, 1878
Hin6I GCGC 1 cut(s) 1443
HinP1I GCGC 1 cut(s) 1443
HincII GTYRAC 1 cut(s) 1519
HindII GTYRAC 1 cut(s) 1519
HindIII AAGCTT 2 cut(s) 379, 435
HinfI GANTC 3 cut(s) 1352, 1757, 1853
HpaII CCGG 3 cut(s) 140, 831, 1002
HphI GGTGA 2 cut(s) 1286, 1567
Hpy166II GTNNAC 5 cut(s) 557, 748, 912, 1205, 1519
Hpy188I TCNGA 8 cut(s) 237, 755, 858, 999, 1605, 1828, 1861, 1943
Hpy188III TCNNGA 5 cut(s) 575, 917, 1241, 1453, 1725
Hpy8I GTNNAC 5 cut(s) 557, 748, 912, 1205, 1519
HpyAV CCTTC 4 cut(s) 700, 812, 1600, 1823
HpyCH4III ACNGT 9 cut(s) 156, 532, 544, 807, 827, 888, 1238, 1804, 1812
HpyCH4IV ACGT 2 cut(s) 499, 1309
HpyCH4V TGCA 9 cut(s) 62, 264, 376, 481, 676, 1022, 1346, 1487, 1669
HpySE526I ACGT 2 cut(s) 499, 1309
Hsp92II CATG 9 cut(s) 411, 481, 624, 920, 957, 1220, 1620, 1818, 1878
HspAI GCGC 1 cut(s) 1443
KpnI GGTACC 1 cut(s) 1613
Ksp22I TGATCA 1 cut(s) 1600
Kzo9I GATC 7 cut(s) 310, 331, 391, 1074, 1326, 1600, 1655
LguI GCTCTTC 2 cut(s) 120, 610
LmnI GCTCC 5 cut(s) 278, 358, 636, 1897, 1919
Lsp1109I GCAGC 8 cut(s) 58, 61, 80, 235, 1281, 1471, 1484, 1487
LweI GCATC 3 cut(s) 1009, 1144, 1333
MaeI CTAG 5 cut(s) 78, 362, 597, 1425, 1785
MaeII ACGT 2 cut(s) 499, 1309
MaeIII GTNAC 4 cut(s) 493, 544, 844, 1004
MalI GATC 7 cut(s) 312, 333, 393, 1076, 1328, 1602, 1657
MboI GATC 7 cut(s) 310, 331, 391, 1074, 1326, 1600, 1655
MflI RGATCY 2 cut(s) 391, 1326
MhlI GDGCHC 4 cut(s) 116, 1256, 1722, 1748
MlsI TGGCCA 1 cut(s) 1215
MluCI AATT 9 cut(s) 131, 515, 662, 758, 973, 1259, 1624, 1661, 1792
MluNI TGGCCA 1 cut(s) 1215
MmeI TCCRAC 3 cut(s) 614, 691, 977
Mox20I TGGCCA 1 cut(s) 1215
MroXI GAANNNNTTC 2 cut(s) 776, 1133
MscI TGGCCA 1 cut(s) 1215
MseI TTAA 6 cut(s) 761, 900, 978, 1362, 1389, 1562
MslI CAYNNNNRTG 4 cut(s) 157, 306, 371, 1813
Msp20I TGGCCA 1 cut(s) 1215
MspA1I CMGCKG 1 cut(s) 71
MspI CCGG 3 cut(s) 140, 831, 1002
MspR9I CCNGG 4 cut(s) 140, 141, 630, 832
Mva1269I GAATGC 1 cut(s) 264
MvaI CCWGG 1 cut(s) 630
NciI CCSGG 3 cut(s) 140, 141, 832
NcoI CCATGG 2 cut(s) 407, 953
NdeI CATATG 1 cut(s) 742
NdeII GATC 7 cut(s) 310, 331, 391, 1074, 1326, 1600, 1655
NlaIII CATG 9 cut(s) 411, 481, 624, 920, 957, 1220, 1620, 1818, 1878
NlaIV GGNNCC 7 cut(s) 38, 113, 1328, 1611, 1720, 1806, 1921
NmuCI GTSAC 2 cut(s) 493, 844
NspI RCATGY 2 cut(s) 481, 1620
OliI CACNNNNGTG 1 cut(s) 157
PaeR7I CTCGAG 2 cut(s) 560, 1723
PagI TCATGA 1 cut(s) 916
PaqCI CACCTGC 1 cut(s) 687
PciI ACATGT 1 cut(s) 1616
PciSI GCTCTTC 2 cut(s) 120, 610
PctI GAATGC 1 cut(s) 264
PdmI GAANNNNTTC 2 cut(s) 776, 1133
PfeI GAWTC 3 cut(s) 1352, 1757, 1853
PflFI GACNNNGTC 1 cut(s) 993
PinAI ACCGGT 1 cut(s) 1001
PkrI GCNGC 8 cut(s) 70, 73, 76, 250, 1296, 1474, 1477, 1486
PpuMI RGGWCCY 1 cut(s) 37
PscI ACATGT 1 cut(s) 1616
Psp124BI GAGCTC 1 cut(s) 1748
Psp5II RGGWCCY 1 cut(s) 37
Psp6I CCWGG 1 cut(s) 628
PspEI GGTNACC 1 cut(s) 1004
PspFI CCCAGC 1 cut(s) 1715
PspGI CCWGG 1 cut(s) 628
PspN4I GGNNCC 7 cut(s) 38, 113, 1328, 1611, 1720, 1806, 1921
PspOMI GGGCCC 1 cut(s) 1718
PspPI GGNCC 6 cut(s) 37, 187, 861, 999, 1718, 1719
PspPPI RGGWCCY 1 cut(s) 37
PspXI VCTCGAGB 1 cut(s) 560
PstNI CAGNNNCTG 3 cut(s) 74, 196, 805
PsuI RGATCY 2 cut(s) 391, 1326
PsyI GACNNNGTC 1 cut(s) 993
PvuII CAGCTG 1 cut(s) 71
RsaI GTAC 3 cut(s) 241, 829, 1611
RsaNI GTAC 3 cut(s) 240, 828, 1610
RseI CAYNNNNRTG 4 cut(s) 157, 306, 371, 1813
Rsr2I CGGWCCG 1 cut(s) 999
RsrII CGGWCCG 1 cut(s) 999
SacI GAGCTC 1 cut(s) 1748
SapI GCTCTTC 2 cut(s) 120, 610
SaqAI TTAA 6 cut(s) 761, 900, 978, 1362, 1389, 1562
SatI GCNGC 8 cut(s) 69, 72, 75, 249, 1295, 1473, 1476, 1485
Sau3AI GATC 7 cut(s) 310, 331, 391, 1074, 1326, 1600, 1655
Sau96I GGNCC 6 cut(s) 37, 187, 861, 999, 1718, 1719
ScaI AGTACT 1 cut(s) 241
ScrFI CCNGG 4 cut(s) 140, 141, 630, 832
SduI GDGCHC 4 cut(s) 116, 1256, 1722, 1748
SfaNI GCATC 3 cut(s) 1009, 1144, 1333
SfcI CTRYAG 1 cut(s) 18
Sfr274I CTCGAG 2 cut(s) 560, 1723
SinI GGWCC 3 cut(s) 37, 187, 999
SlaI CTCGAG 2 cut(s) 560, 1723
SmaI CCCGGG 1 cut(s) 141
SmiMI CAYNNNNRTG 4 cut(s) 157, 306, 371, 1813
SmlI CTYRAG 3 cut(s) 560, 1223, 1723
SmoI CTYRAG 3 cut(s) 560, 1223, 1723
Sse9I AATT 9 cut(s) 131, 515, 662, 758, 973, 1259, 1624, 1661, 1792
SsiI CCGC 1 cut(s) 1697
SspMI CTAG 5 cut(s) 78, 362, 597, 1425, 1785
SstI GAGCTC 1 cut(s) 1748
StyD4I CCNGG 4 cut(s) 138, 139, 628, 830
StyI CCWWGG 7 cut(s) 205, 407, 509, 953, 1112, 1177, 1337
TaaI ACNGT 9 cut(s) 156, 532, 544, 807, 827, 888, 1238, 1804, 1812
TaiI ACGT 2 cut(s) 502, 1312
TaqI TCGA 6 cut(s) 145, 450, 561, 576, 790, 1724
TasI AATT 9 cut(s) 131, 515, 662, 758, 973, 1259, 1624, 1661, 1792
TatI WGTACW 1 cut(s) 239
TfiI GAWTC 3 cut(s) 1352, 1757, 1853
Tru1I TTAA 6 cut(s) 761, 900, 978, 1362, 1389, 1562
Tru9I TTAA 6 cut(s) 761, 900, 978, 1362, 1389, 1562
TscAI CASTG 3 cut(s) 537, 933, 1537
TseFI GTSAC 2 cut(s) 493, 844
TseI GCWGC 8 cut(s) 68, 71, 74, 248, 1294, 1472, 1475, 1484
Tsp45I GTSAC 2 cut(s) 493, 844
TspDTI ATGAA 9 cut(s) 597, 719, 809, 1142, 1521, 1749, 1785, 1809, 1880
TspGWI ACGGA 1 cut(s) 602
TspMI CCCGGG 1 cut(s) 139
TspRI CASTG 3 cut(s) 537, 933, 1537
Tth111I GACNNNGTC 1 cut(s) 993
VpaK11BI GGWCC 3 cut(s) 37, 187, 999
XapI RAATTY 5 cut(s) 662, 1259, 1624, 1661, 1792
XceI RCATGY 2 cut(s) 481, 1620
XhoI CTCGAG 2 cut(s) 560, 1723
XmaI CCCGGG 1 cut(s) 139
XmnI GAANNNNTTC 2 cut(s) 776, 1133
XspI CTAG 5 cut(s) 78, 362, 597, 1425, 1785
ZrmI AGTACT 1 cut(s) 241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.