RLG00000009780

FAD binding domain of DNA photolyase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0006855
Physical Location & Seq
Forward (+)
57665396 .. 57669454
4059 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009780

Sequence Viewer

Length: 1935 bp
ATGGGTAGCAGCAATAAGACCATAGTTTGGTTTAGAAGGGACCTGAGGATCGAGGACAATCCAGCCTTAGCTGCTGCTGCTAGGGATGGTGCTGTCTTTCCTGTTTACATATGGTGCCCGAAAGACGAAGGACAGTTCTACCCCGGTCGAGTTTCGCGGTGGTGGCTGAAGCAGTCTCTTGCTCACTTGGATCAGTCCTTGAAGTCTCTTGGCGCTCAACTTGTGCTGATCAAAACCCACAGTACACTCTCTGCTCTCTTGGACTGCATTCAAGCTATTGGAGCCACAAAAGTAGTGTTCAACCATCTATATGATCCTGTTTCACTCGTGTGTGATCACAACATCAAAGGAAAGCTGGTAGAGCTAGGAGTTTCTGTGCAAAGCTATAATGCAGATTTGTTGTACGAGCCATGGGAAGTATATGATGCAAAAGGACAAACATTTACAACGTTTAAGGCATACTGGGACAAGTGCTTAGACATGGAGAGGGAACTTGTGACATTTCTTCCTCCCTGGAAATTATTGCCTGCAACAGGAACGGTGGCAAAATGTTCAATCGAAGAATTGGGTCTCGAAAATGAAACAGAAAAATCTAGCAATGCCCTCTTAGGAAGAGCATGGACTCCAGGCTGGAGCCAAGCTGATAAAGCTTTAAATGAATTCTTTGATGGGCACCTGCTAGACTATGCAAAGAACAGGACAAAACTTGGGGGCAACTCAACATCACTATTGTCTCCATATCTTCACTTTGGAGAAGTGAGTGTGAGGAAAGTTTTCCAGATAGCTCGAATGAAGCAGATACTGTTTGCAAAAGAAGGGAACTCTCTAGGCGAAGAGAGTGTGACTCTTTTTCTCCGGGCCATTGGGCTTAGAGAATACTCACGCTATCTTTGTTTTAACTTTCCATTCTCCCATGAGAAATCACTGCTGAGCAACTTGAGATTCTTTCCATGGCAAGCTGACCAGGAACGTTTTAAGGCTTGGAGACAAGGTCGGACCGGCTACCCTTTAGTTGATGCAGGAATGAGAGAGCTTTGGGCAACTGGCTGGATTCACAACAGAATAAGAGTGATTGTTTCGAGTTTCGCTGTGAAAGTTTTGCTTCTTCCTTGGAGATGGGGAATGAAGTATTTCTGGGACACACTTATGGATGCAGACTTGGAAAGTGATATCCTTGGTTGGCAGTATATCTCAGGGAGCTTACCAGATGGCCATGAGCTTGAGCGTTTGGATAGTCCAGAGGTCCAAGGCTCAAAATTTGATCCAGAGGGTGAATATGTAAGGCAATGGCTGCCTGAGTTAGCACGTTTACCAACTGAGTGGATCCATCATCCTTGGGACACGCCCGATAAAGTGCTTAAAGTTTCAGGAGTAGAGCTAGGAGTCAACTATCCAAGACCTATAATCGAGATAGATTTGGCTAGAGAAAATTTGACTAAAGCCATATTCAAGATGTGGGAAATGGAAGCGGCTGCAAAGGCTGGAAACCTGAATGGTACAAATGAAGTTGTTGTTGATAACTCTGATGGGATTGAAAACTTGCCGATCCCAAAGGTGATCTTAAGGAATAACACTCCTTGTGCTACTTATTCATCTAATGATCAGAAGGTACCTACATGTCACAATTCTGAGGGAAATCAATTGAAGAAGAGATCCAGATTTACACAAGGAGAACGGCCACTACCAGATAATGGGCACAATCCTAATCCTAATGAAGCCACCTCAAGAACAATTGAAGACATGAGCTCTACAGCTGAATCTTCAATGTCTAAGAAGCAGACAACCAGCAGAACTTCATTTTCTGTTCCACAGTCATGTTCCTCATCAAAAGCCAACCCTTTTATGGAGTCTGAATCTTCTGAAATGAAGCAGTCATGGCAAGAACAGAGCGACATGGAACACAGTTCAAGCAAAGATAGAGCTGCTGAAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000166 GO:0001101 GO:0002252 GO:0002376 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005773 GO:0006139 GO:0006325 GO:0006338 GO:0006725 GO:0006732 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0006873 GO:0006874 GO:0006875 GO:0006950 GO:0006952 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0007623 GO:0008144 GO:0008150 GO:0008152 GO:0009117 GO:0009314 GO:0009414 GO:0009415 GO:0009416 GO:0009605 GO:0009606 GO:0009607 GO:0009615 GO:0009628 GO:0009637 GO:0009638 GO:0009642 GO:0009645 GO:0009646 GO:0009648 GO:0009719 GO:0009725 GO:0009785 GO:0009791 GO:0009881 GO:0009882 GO:0009888 GO:0009893 GO:0009909 GO:0009911 GO:0009987 GO:0010033 GO:0010035 GO:0010073 GO:0010075 GO:0010118 GO:0010228 GO:0010244 GO:0010617 GO:0014070 GO:0016043 GO:0016604 GO:0017076 GO:0019222 GO:0019637 GO:0019725 GO:0022414 GO:0022603 GO:0023052 GO:0030003 GO:0030522 GO:0030554 GO:0031323 GO:0031325 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0033993 GO:0034641 GO:0035639 GO:0036094 GO:0038023 GO:0040008 GO:0042221 GO:0042592 GO:0042726 GO:0042752 GO:0042802 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048037 GO:0048507 GO:0048509 GO:0048511 GO:0048518 GO:0048522 GO:0048571 GO:0048573 GO:0048574 GO:0048580 GO:0048582 GO:0048583 GO:0048608 GO:0048638 GO:0048731 GO:0048831 GO:0048856 GO:0048878 GO:0050660 GO:0050662 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051094 GO:0051186 GO:0051239 GO:0051240 GO:0051276 GO:0051480 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055086 GO:0060089 GO:0061458 GO:0065007 GO:0065008 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071483 GO:0071704 GO:0071840 GO:0071949 GO:0072387 GO:0072503 GO:0072507 GO:0097159 GO:0097367 GO:0098542 GO:0098771 GO:0104004 GO:1900618 GO:1901265 GO:1901360 GO:1901363 GO:1901371 GO:1901564 GO:1901700 GO:1902347 GO:1905421 GO:2000024 GO:2000026 GO:2000028 GO:2000241 GO:2000243 GO:2000377 GO:2000379
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
DNA_photolyase FAD_binding_7

Protein Analysis

645

Amino Acids

73.05

Weight (kDa)

5.95

Isoelectric Point (pI)

45.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DNA_photolyase PF00875 7 - 160 1.5e-38 DNA photolyase
FAD_binding_7 PF03441 284 - 481 4.5e-69 FAD binding domain of DNA photolyase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 684
Acc36I ACCTGC 1 cut(s) 684
Acc65I GGTACC 1 cut(s) 1609
AccB1I GGYRCC 3 cut(s) 114, 672, 1609
AccB7I CCANNNNNTGG 2 cut(s) 27, 1691
AccII CGCG 1 cut(s) 157
AciI CCGC 2 cut(s) 157, 1469
AclI AACGTT 2 cut(s) 449, 970
AclWI GGATC 8 cut(s) 56, 198, 308, 1256, 1318, 1331, 1540, 1647
AcoI YGGCCR 2 cut(s) 1210, 1676
AcsI RAATTY 3 cut(s) 659, 1256, 1429
AcuI CTGAAG 1 cut(s) 188
AfaI GTAC 4 cut(s) 244, 404, 1498, 1611
AfiI CCNNNNNNNGG 4 cut(s) 27, 533, 1691, 1843
AflII CTTAAG 1 cut(s) 1561
AflIII ACRYGT 1 cut(s) 1616
AjnI CCWGG 3 cut(s) 512, 625, 963
AleI CACNNNNGTG 1 cut(s) 328
Alw21I GWGCWC 1 cut(s) 1748
Alw26I GTCTC 5 cut(s) 180, 210, 575, 738, 979
AlwI GGATC 8 cut(s) 56, 198, 308, 1256, 1318, 1331, 1540, 1647
AlwNI CAGNNNCTG 1 cut(s) 802
AoxI GGCC 3 cut(s) 858, 1210, 1676
ApeKI GCWGC 7 cut(s) 9, 71, 74, 77, 1291, 1472, 1922
ApoI RAATTY 3 cut(s) 659, 1256, 1429
Asp700I GAANNNNTTC 2 cut(s) 773, 1130
Asp718I GGTACC 1 cut(s) 1609
AspLEI GCGC 1 cut(s) 215
AspS9I GGNCC 4 cut(s) 40, 858, 996, 1243
AsuC2I CCSGG 2 cut(s) 144, 857
AsuHPI GGTGA 2 cut(s) 1283, 1567
AvaII GGWCC 3 cut(s) 40, 996, 1243
AxyI CCTNAGG 1 cut(s) 44
BaeGI GKGCMC 3 cut(s) 119, 675, 1698
BalI TGGCCA 1 cut(s) 1212
BamHI GGATCC 1 cut(s) 1323
BanI GGYRCC 3 cut(s) 114, 672, 1609
BanII GRGCYC 1 cut(s) 1748
BauI CACGAG 1 cut(s) 326
BbsI GAAGAC 1 cut(s) 1743
Bbv12I GWGCWC 1 cut(s) 1748
BbvI GCAGC 7 cut(s) 21, 58, 61, 64, 1278, 1459, 1909
BccI CCATC 7 cut(s) 80, 312, 662, 1110, 1202, 1335, 1520
BceAI ACGGC 1 cut(s) 1691
BciT130I CCWGG 3 cut(s) 514, 627, 965
BclI TGATCA 3 cut(s) 228, 334, 1600
BcnI CCSGG 2 cut(s) 144, 857
BcoDI GTCTC 5 cut(s) 180, 210, 575, 738, 979
BfaI CTAG 7 cut(s) 81, 365, 594, 680, 827, 1379, 1422
BfmI CTRYAG 1 cut(s) 1749
BfoI RGCGCY 1 cut(s) 216
BfrI CTTAAG 1 cut(s) 1561
BfuAI ACCTGC 1 cut(s) 684
BisI GCNGC 8 cut(s) 10, 72, 75, 78, 1292, 1470, 1473, 1923
BlpI GCTNAGC 1 cut(s) 929
BlsI GCNGC 8 cut(s) 11, 73, 76, 79, 1293, 1471, 1474, 1924
Bme1390I CCNGG 5 cut(s) 144, 514, 627, 857, 965
Bme18I GGWCC 3 cut(s) 40, 996, 1243
BmgT120I GGNCC 4 cut(s) 40, 858, 996, 1243
BmiI GGNNCC 7 cut(s) 41, 116, 283, 635, 674, 1325, 1611
BmrFI CCNGG 5 cut(s) 144, 514, 627, 857, 965
BmrI ACTGGG 1 cut(s) 472
BmsI GCATC 3 cut(s) 415, 1006, 1141
BmuI ACTGGG 1 cut(s) 472
BpiI GAAGAC 1 cut(s) 1743
BplI GAGNNNNNCTC 2 cut(s) 829, 861
BpmI CTGGAG 2 cut(s) 609, 652
Bpu10I CCTNAGC 1 cut(s) 67
Bpu1102I GCTNAGC 1 cut(s) 929
BpuEI CTTGAG 3 cut(s) 958, 1241, 1708
BpuMI CCSGG 2 cut(s) 144, 857
BsaI GGTCTC 1 cut(s) 575
BsaJI CCNNGG 8 cut(s) 142, 410, 512, 950, 1109, 1174, 1246, 1334
BsaXI ACNNNNNCTCC 4 cut(s) 360, 390, 976, 1006
Bsc4I CCNNNNNNNGG 4 cut(s) 27, 533, 1691, 1843
Bse118I RCCGGY 1 cut(s) 998
Bse1I ACTGG 2 cut(s) 467, 1048
Bse21I CCTNAGG 1 cut(s) 44
Bse3DI GCAATG 2 cut(s) 604, 1292
BseBI CCWGG 3 cut(s) 514, 627, 965
BseDI CCNNGG 8 cut(s) 142, 410, 512, 950, 1109, 1174, 1246, 1334
BseGI GGATG 3 cut(s) 91, 1156, 1330
BseLI CCNNNNNNNGG 4 cut(s) 27, 533, 1691, 1843
BseMI GCAATG 2 cut(s) 604, 1292
BseMII CTCAG 6 cut(s) 35, 920, 1206, 1287, 1308, 1620
BseNI ACTGG 2 cut(s) 467, 1048
BseSI GKGCMC 3 cut(s) 119, 675, 1698
BseXI GCAGC 7 cut(s) 21, 58, 61, 64, 1278, 1459, 1909
Bsh1236I CGCG 1 cut(s) 157
Bsh1285I CGRYCG 1 cut(s) 148
BshFI GGCC 3 cut(s) 860, 1212, 1678
BshNI GGYRCC 3 cut(s) 114, 672, 1609
BsiEI CGRYCG 1 cut(s) 148
BsiHKAI GWGCWC 1 cut(s) 1748
BsiSI CCGG 3 cut(s) 144, 856, 999
BslFI GGGAC 4 cut(s) 53, 479, 1151, 1352
BslI CCNNNNNNNGG 4 cut(s) 27, 533, 1691, 1843
BsmAI GTCTC 5 cut(s) 180, 210, 575, 738, 979
BsmFI GGGAC 4 cut(s) 53, 479, 1151, 1352
BsmI GAATGC 1 cut(s) 267
BsnI GGCC 3 cut(s) 860, 1212, 1678
Bso31I GGTCTC 1 cut(s) 575
Bsp1286I GDGCHC 4 cut(s) 119, 675, 1698, 1748
Bsp1720I GCTNAGC 1 cut(s) 929
Bsp19I CCATGG 2 cut(s) 410, 950
BspACI CCGC 2 cut(s) 157, 1469
BspANI GGCC 3 cut(s) 860, 1212, 1678
BspCNI CTCAG 6 cut(s) 36, 921, 1205, 1288, 1309, 1621
BspFNI CGCG 1 cut(s) 157
BspLI GGNNCC 7 cut(s) 41, 116, 283, 635, 674, 1325, 1611
BspMI ACCTGC 1 cut(s) 684
BspPI GGATC 8 cut(s) 56, 198, 308, 1256, 1318, 1331, 1540, 1647
BspQI GCTCTTC 1 cut(s) 607
BspT107I GGYRCC 3 cut(s) 114, 672, 1609
BspTI CTTAAG 1 cut(s) 1561
BspTNI GGTCTC 1 cut(s) 575
BsrDI GCAATG 2 cut(s) 604, 1292
BsrFI RCCGGY 1 cut(s) 998
BsrI ACTGG 2 cut(s) 467, 1048
BssAI RCCGGY 1 cut(s) 998
BssECI CCNNGG 8 cut(s) 142, 410, 512, 950, 1109, 1174, 1246, 1334
BssSI CACGAG 1 cut(s) 326
BssT1I CCWWGG 6 cut(s) 410, 950, 1109, 1174, 1246, 1334
Bst2BI CACGAG 1 cut(s) 326
Bst2UI CCWGG 3 cut(s) 514, 627, 965
Bst4CI ACNGT 6 cut(s) 135, 242, 541, 804, 1812, 1904
Bst6I CTCTTC 3 cut(s) 607, 828, 1643
BstAFI CTTAAG 1 cut(s) 1561
BstAPI GCANNNNNTGC 1 cut(s) 1291
BstC8I GCNNGC 2 cut(s) 528, 957
BstDSI CCRYGG 2 cut(s) 410, 950
BstENI CCTNNNNNAGG 1 cut(s) 531
BstF5I GGATG 3 cut(s) 91, 1156, 1330
BstFNI CGCG 1 cut(s) 157
BstH2I RGCGCY 1 cut(s) 216
BstHHI GCGC 1 cut(s) 215
BstMAI GTCTC 5 cut(s) 180, 210, 575, 738, 979
BstMCI CGRYCG 1 cut(s) 148
BstMWI GCNNNNNNNGC 9 cut(s) 71, 77, 163, 281, 361, 647, 1291, 1478, 1876
BstNI CCWGG 3 cut(s) 514, 627, 965
BstNSI RCATGY 1 cut(s) 1620
BstSCI CCNGG 5 cut(s) 142, 512, 625, 855, 963
BstSFI CTRYAG 1 cut(s) 1749
BstSLI GKGCMC 3 cut(s) 119, 675, 1698
BstUI CGCG 1 cut(s) 157
BstV1I GCAGC 7 cut(s) 21, 58, 61, 64, 1278, 1459, 1909
BstV2I GAAGAC 1 cut(s) 1743
BstX2I RGATCY 2 cut(s) 1323, 1652
BstXI CCANNNNNNTGG 1 cut(s) 1320
BstYI RGATCY 2 cut(s) 1323, 1652
Bsu36I CCTNAGG 1 cut(s) 44
BsuRI GGCC 3 cut(s) 860, 1212, 1678
BtgI CCRYGG 2 cut(s) 410, 950
BtsCI GGATG 3 cut(s) 91, 1156, 1330
BtsI GCAGTG 1 cut(s) 923
BtsIMutI CAGTG 1 cut(s) 923
BveI ACCTGC 1 cut(s) 684
Cac8I GCNNGC 2 cut(s) 528, 957
CaiI CAGNNNCTG 1 cut(s) 802
CfoI GCGC 1 cut(s) 215
Cfr10I RCCGGY 1 cut(s) 998
Cfr13I GGNCC 4 cut(s) 40, 858, 996, 1243
CpoI CGGWCCG 1 cut(s) 996
Csp6I GTAC 4 cut(s) 243, 403, 1497, 1610
CspI CGGWCCG 1 cut(s) 996
CviQI GTAC 4 cut(s) 243, 403, 1497, 1610
DraI TTTAAA 1 cut(s) 654
EaeI YGGCCR 2 cut(s) 1210, 1676
Eam1104I CTCTTC 3 cut(s) 607, 828, 1643
EarI CTCTTC 3 cut(s) 607, 828, 1643
Ecl136II GAGCTC 1 cut(s) 1746
Eco130I CCWWGG 6 cut(s) 410, 950, 1109, 1174, 1246, 1334
Eco24I GRGCYC 1 cut(s) 1748
Eco31I GGTCTC 1 cut(s) 575
Eco32I GATATC 1 cut(s) 1171
Eco47I GGWCC 3 cut(s) 40, 996, 1243
Eco53kI GAGCTC 1 cut(s) 1746
Eco57I CTGAAG 1 cut(s) 188
Eco81I CCTNAGG 1 cut(s) 44
EcoICRI GAGCTC 1 cut(s) 1746
EcoNI CCTNNNNNAGG 1 cut(s) 531
EcoO109I RGGNCCY 1 cut(s) 40
EcoRI GAATTC 1 cut(s) 659
EcoRII CCWGG 3 cut(s) 512, 625, 963
EcoRV GATATC 1 cut(s) 1171
EcoT14I CCWWGG 6 cut(s) 410, 950, 1109, 1174, 1246, 1334
EcoT38I GRGCYC 1 cut(s) 1748
ErhI CCWWGG 6 cut(s) 410, 950, 1109, 1174, 1246, 1334
FalI AAGNNNNNCTT 4 cut(s) 1086, 1118, 1544, 1576
FaqI GGGAC 4 cut(s) 53, 479, 1151, 1352
FauNDI CATATG 1 cut(s) 110
FbaI TGATCA 3 cut(s) 228, 334, 1600
Fnu4HI GCNGC 8 cut(s) 10, 72, 75, 78, 1292, 1470, 1473, 1923
FokI GGATG 3 cut(s) 98, 1163, 1317
FriOI GRGCYC 1 cut(s) 1748
Fsp4HI GCNGC 8 cut(s) 10, 72, 75, 78, 1292, 1470, 1473, 1923
FspBI CTAG 7 cut(s) 81, 365, 594, 680, 827, 1379, 1422
GlaI GCGC 1 cut(s) 214
GluI GCNGC 8 cut(s) 10, 72, 75, 78, 1292, 1470, 1473, 1923
GsuI CTGGAG 2 cut(s) 609, 652
HaeII RGCGCY 1 cut(s) 216
HaeIII GGCC 3 cut(s) 860, 1212, 1678
HapII CCGG 3 cut(s) 144, 856, 999
HhaI GCGC 1 cut(s) 215
Hin6I GCGC 1 cut(s) 213
HinP1I GCGC 1 cut(s) 213
HincII GTYRAC 1 cut(s) 1387
HindII GTYRAC 1 cut(s) 1387
HindIII AAGCTT 1 cut(s) 648
HinfI GANTC 8 cut(s) 622, 844, 942, 1051, 1383, 1757, 1847, 1853
HpaII CCGG 3 cut(s) 144, 856, 999
HphI GGTGA 2 cut(s) 1283, 1567
Hpy166II GTNNAC 4 cut(s) 106, 245, 1310, 1387
Hpy188I TCNGA 6 cut(s) 996, 1525, 1605, 1630, 1852, 1861
Hpy188III TCNNGA 9 cut(s) 572, 778, 1238, 1265, 1368, 1408, 1450, 1656, 1725
Hpy8I GTNNAC 4 cut(s) 106, 245, 1310, 1387
HpyAV CCTTC 4 cut(s) 30, 122, 809, 1600
HpyCH4III ACNGT 6 cut(s) 135, 242, 541, 804, 1812, 1904
HpyCH4IV ACGT 3 cut(s) 449, 970, 1306
HpyF10VI GCNNNNNNNGC 9 cut(s) 71, 77, 163, 281, 361, 647, 1291, 1478, 1876
HpySE526I ACGT 3 cut(s) 449, 970, 1306
HspAI GCGC 1 cut(s) 213
KpnI GGTACC 1 cut(s) 1613
Ksp22I TGATCA 3 cut(s) 228, 334, 1600
LguI GCTCTTC 1 cut(s) 607
LmnI GCTCC 3 cut(s) 281, 633, 1197
Lsp1109I GCAGC 7 cut(s) 21, 58, 61, 64, 1278, 1459, 1909
LweI GCATC 3 cut(s) 415, 1006, 1141
MaeI CTAG 7 cut(s) 81, 365, 594, 680, 827, 1379, 1422
MaeII ACGT 3 cut(s) 449, 970, 1306
MaeIII GTNAC 3 cut(s) 496, 841, 1619
MfeI CAATTG 2 cut(s) 1640, 1731
MflI RGATCY 2 cut(s) 1323, 1652
MhlI GDGCHC 4 cut(s) 119, 675, 1698, 1748
MlsI TGGCCA 1 cut(s) 1212
MluCI AATT 8 cut(s) 518, 563, 659, 1256, 1429, 1624, 1640, 1731
MluNI TGGCCA 1 cut(s) 1212
MlyI GAGTC 4 cut(s) 616, 838, 1392, 1856
MmeI TCCRAC 1 cut(s) 974
Mox20I TGGCCA 1 cut(s) 1212
MroXI GAANNNNTTC 2 cut(s) 773, 1130
MscI TGGCCA 1 cut(s) 1212
MseI TTAA 7 cut(s) 453, 653, 897, 975, 1359, 1562, 1933
MslI CAYNNNNRTG 4 cut(s) 309, 328, 1145, 1813
Msp20I TGGCCA 1 cut(s) 1212
MspA1I CMGCKG 1 cut(s) 1754
MspCI CTTAAG 1 cut(s) 1561
MspI CCGG 3 cut(s) 144, 856, 999
MspR9I CCNGG 5 cut(s) 144, 514, 627, 857, 965
MunI CAATTG 2 cut(s) 1640, 1731
Mva1269I GAATGC 1 cut(s) 267
MvaI CCWGG 3 cut(s) 514, 627, 965
MvnI CGCG 1 cut(s) 157
MwoI GCNNNNNNNGC 9 cut(s) 71, 77, 163, 281, 361, 647, 1291, 1478, 1876
NciI CCSGG 2 cut(s) 144, 857
NcoI CCATGG 2 cut(s) 410, 950
NdeI CATATG 1 cut(s) 110
NlaIV GGNNCC 7 cut(s) 41, 116, 283, 635, 674, 1325, 1611
NmuCI GTSAC 3 cut(s) 496, 841, 1619
NspI RCATGY 1 cut(s) 1620
OliI CACNNNNGTG 1 cut(s) 328
PaqCI CACCTGC 1 cut(s) 684
PciI ACATGT 1 cut(s) 1616
PciSI GCTCTTC 1 cut(s) 607
PctI GAATGC 1 cut(s) 267
PdmI GAANNNNTTC 2 cut(s) 773, 1130
PfeI GAWTC 4 cut(s) 942, 1051, 1757, 1853
PflFI GACNNNGTC 1 cut(s) 990
PflMI CCANNNNNTGG 2 cut(s) 27, 1691
PkrI GCNGC 8 cut(s) 11, 73, 76, 79, 1293, 1471, 1474, 1924
PleI GAGTC 4 cut(s) 616, 838, 1391, 1855
PpsI GAGTC 4 cut(s) 616, 838, 1391, 1855
PpuMI RGGWCCY 1 cut(s) 40
PscI ACATGT 1 cut(s) 1616
Psp124BI GAGCTC 1 cut(s) 1748
Psp1406I AACGTT 2 cut(s) 449, 970
Psp5II RGGWCCY 1 cut(s) 40
Psp6I CCWGG 3 cut(s) 512, 625, 963
PspGI CCWGG 3 cut(s) 512, 625, 963
PspN4I GGNNCC 7 cut(s) 41, 116, 283, 635, 674, 1325, 1611
PspPI GGNCC 4 cut(s) 40, 858, 996, 1243
PspPPI RGGWCCY 1 cut(s) 40
PsrI GAACNNNNNNTAC 2 cut(s) 1665, 1697
PstNI CAGNNNCTG 1 cut(s) 802
PsuI RGATCY 2 cut(s) 1323, 1652
PsyI GACNNNGTC 1 cut(s) 990
PvuII CAGCTG 1 cut(s) 1754
RsaI GTAC 4 cut(s) 244, 404, 1498, 1611
RsaNI GTAC 4 cut(s) 243, 403, 1497, 1610
RseI CAYNNNNRTG 4 cut(s) 309, 328, 1145, 1813
Rsr2I CGGWCCG 1 cut(s) 996
RsrII CGGWCCG 1 cut(s) 996
SacI GAGCTC 1 cut(s) 1748
SapI GCTCTTC 1 cut(s) 607
SaqAI TTAA 7 cut(s) 453, 653, 897, 975, 1359, 1562, 1933
SatI GCNGC 8 cut(s) 10, 72, 75, 78, 1292, 1470, 1473, 1923
Sau96I GGNCC 4 cut(s) 40, 858, 996, 1243
SchI GAGTC 4 cut(s) 616, 838, 1392, 1856
ScrFI CCNGG 5 cut(s) 144, 514, 627, 857, 965
SduI GDGCHC 4 cut(s) 119, 675, 1698, 1748
SfaNI GCATC 3 cut(s) 415, 1006, 1141
SfcI CTRYAG 1 cut(s) 1749
SinI GGWCC 3 cut(s) 40, 996, 1243
SmiMI CAYNNNNRTG 4 cut(s) 309, 328, 1145, 1813
SmlI CTYRAG 4 cut(s) 937, 1220, 1561, 1723
SmoI CTYRAG 4 cut(s) 937, 1220, 1561, 1723
Sse9I AATT 8 cut(s) 518, 563, 659, 1256, 1429, 1624, 1640, 1731
SsiI CCGC 2 cut(s) 157, 1469
SspMI CTAG 7 cut(s) 81, 365, 594, 680, 827, 1379, 1422
SstI GAGCTC 1 cut(s) 1748
StyD4I CCNGG 5 cut(s) 142, 512, 625, 855, 963
StyI CCWWGG 6 cut(s) 410, 950, 1109, 1174, 1246, 1334
TaaI ACNGT 6 cut(s) 135, 242, 541, 804, 1812, 1904
TaiI ACGT 3 cut(s) 452, 973, 1309
TaqI TCGA 7 cut(s) 51, 148, 558, 573, 787, 1079, 1407
TasI AATT 8 cut(s) 518, 563, 659, 1256, 1429, 1624, 1640, 1731
TatI WGTACW 1 cut(s) 242
TauI GCSGC 1 cut(s) 1472
TfiI GAWTC 4 cut(s) 942, 1051, 1757, 1853
Tru1I TTAA 7 cut(s) 453, 653, 897, 975, 1359, 1562, 1933
Tru9I TTAA 7 cut(s) 453, 653, 897, 975, 1359, 1562, 1933
TscAI CASTG 1 cut(s) 930
TseFI GTSAC 3 cut(s) 496, 841, 1619
TseI GCWGC 7 cut(s) 9, 71, 74, 77, 1291, 1472, 1922
Tsp45I GTSAC 3 cut(s) 496, 841, 1619
TspDTI ATGAA 9 cut(s) 594, 672, 806, 1139, 1518, 1581, 1728, 1785, 1880
TspRI CASTG 1 cut(s) 930
Tth111I GACNNNGTC 1 cut(s) 990
Van91I CCANNNNNTGG 2 cut(s) 27, 1691
Vha464I CTTAAG 1 cut(s) 1561
VpaK11BI GGWCC 3 cut(s) 40, 996, 1243
XagI CCTNNNNNAGG 1 cut(s) 531
XapI RAATTY 3 cut(s) 659, 1256, 1429
XceI RCATGY 1 cut(s) 1620
XcmI CCANNNNNNNNNTGG 1 cut(s) 1840
XmnI GAANNNNTTC 2 cut(s) 773, 1130
XspI CTAG 7 cut(s) 81, 365, 594, 680, 827, 1379, 1422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.