Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0006848

Physical Location & Seq

Genomic Coordinates Forward (+)

6180824 .. 6184851

Gene Structure 4028 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g06870.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1941 bp

ATGATCACCGGAAAGGATATTTACGATGTCCTTGCAAGCATTGTGCCGCTTTACGTGGCCATGCTCTTGGCCTACGGCTCGGTCCGGTGGTGGAAGATCTTCACCCCGGATCAATGCTCCGGCATCAACCGCTTCGTGGCTGTCTTTGCCGTTCCTTTGCTTTCCTTTCACTTCATTTCCTCTAACGATCCCTACACCATGGATTACCAGTTCATCGCGGCGGACTCGCTACAGAAAGTGGTGATTCTGGTTGCTCTATTCCTATGGCAGACGTTCTCCAAACGCGGCAACCTCGAGTGGATGATCACGCTCTTCTCCCTCTCCACTCTCCCCAACACTCTCGTCATGGGCATTCCTCTCTTGAAGGCCATGTACGGCGACTTTTCGGGCGGTCTCATGGTTCAAATCGTGGTGCTGCAAAGCGTCATCTGGTACACTCTCATGCTCTTCATGTTCGAGTACAGAGGTGCGAGACTCTTAATTTCAGAGCAGTTTCCGGAAACCGCAGGTTCCATCACCTCGTTCCGAGTGGACTCCGACGTAGTTTCGCTTAACGGACGCGAGCCTTTGCAGACTGATGCCGAGATTGGAGAGGACGGGAAGTTACACGTGGTGGTGAAAAGATCGGCGGCGTCGTCCATGGTGTCATCGTTCAAATCGCACGGGTTGAACTCCTTGAATTCCGGCATGACTCCTAGGGCATCGAACCTCACCGGCGTTGAGATTTACTCGGTTCAGTCGTCTCGTGAACCAACTCCGAGGGCGTCAAGCTTCAACCAGACTGATTTCTACGCCATGTTTAATGCTAGCAAAGCCCCAAGCCCTAAACACGGCTACACCAACAGCTTCCAAGGCGGGTTTGGCGATGTTTACTCGGTTCAGTCATCAAAAGGCGTCACCCCGAGGACTTCCAATTTTGATGAGGAGATGATGAAGATAAGCAACAAGAAGAGAGGGGCCAGAAGCATGAGCGGTGAGCTGTTCAATGCCGGGGCGGTATCTTCTTACCCCCCTCCGAATCCAATGTTTTCGGGGTCTACGAGTGGCGGACCAAAGAAGAAGGAGAGCGGCGGCACCTTTGCCAGTGCCGGTGGTGGTAGTGGTGGTGCAGTGCCTAATAAGGAGCTTCATATGTTTGTTTGGAGCTCGAGTGCTTCGCCTGTTTCCGAGGGGAATATGAAACATGCAGTGAACCGAGCTGCCTCTACTGATTTTGGGAGCATTGATCCTAAGGCTTCTCAACATGACAATCCAATTGCTGGTTCAAAAGGAATGCATGAATTAATTCAGAATATGAGTCCTGGAAGGAAAGTAAATGGAGACGGGGAGCTAGAAATAGAAGAAGGAACAAAGTTTCCGGCAAGTGCATCTCCATATAGTAGTTGCCAGAAGAAGATGGACATGGAAGACGGAGGTGTGGCAAAGAAGCAACAAATGCCTCCTGCAAGTGTCATGACTAGGCTTATACTCATCATGGTTTGGAGGAAGCTCATTAGAAATCCCAACACCTACTCCAGTCTCCTTGGTGTCGCTTGGTCTCTCGTATCATACAAGTGGCACATCAAAATGCCCACAATTATAAGCGGATCCATATCAATATTATCTGATGCTGGCTTGGGAATGGCTATGTTCAGTCTAGGTTTATTCATGGCTCTGCAACCAAAGATCATAGCTTGTGGAAAATCAGTAGCAACATTTGCAATGGCTGTTAGATTCTTGACAGGCCCGGCAGTGATTGCTGCATGCTCCATAGCCGTCGGTCTTCGTGGAGTTCTTTTGCATGTTGCAATAGTTCAGGCTGCTCTTCCACAAGGGATTGTTCCTTTTGTATTTGCCAAAGAATATAATGTGCACCCAGACATACTTAGCACTGCGGTCATTTTTGGAATGCTGGTTGCCTTGCCTATAACAATACTCTACTATATTCTTCTGGGGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0001666 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0006810 GO:0006950 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009743 GO:0009746 GO:0009749 GO:0009914 GO:0009921 GO:0009925 GO:0009926 GO:0009958 GO:0009966 GO:0010033 GO:0010252 GO:0010315 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0015562 GO:0016020 GO:0016323 GO:0022857 GO:0023051 GO:0032991 GO:0034284 GO:0036293 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045178 GO:0048583 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0070482 GO:0071944 GO:0080161 GO:0098590 GO:0098796 GO:0098797 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mem_trans

Protein Analysis

647

Amino Acids

69.8

Weight (kDa)

9.16

Isoelectric Point (pI)

42.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mem_trans	PF03547	10 - 641	1.7e-121	Membrane transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006848)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57090 AT5G57090
fragaria_vesca	FvH4_4g06870
malus_domestica	MD13G1239200.v1.1 MD16G1244500.v1.1
prunus_persica	Prupe.1G071700_v2.0.a1 Prupe.1G071800_v2.0.a1
pyrus_communis	pycom16g20590
rosa_chinensis	RchiOBHm_Chr4g0398751 RchiOBHm_Chr4g0398781
rosa_laevigata	RLG00000009323 RLG00000009324
rosa_multiflora	Rmu_sc0000458.1_g000007
rosa_roxburghii	Rroxscaffold_5G00343700 Rroxscaffold_5G00343710
rosa_rugosa	Rorug04G0011300 Rorug04G0011400
rosa_samantha	Rh4AG089200 Rh4AG089300 Rh4BG086600 Rh4CG097200 Rh4CG097400 Rh4DG080900 Rh4DG081100
rosa_wichuraiana	Rw4G007370 Rw4G007380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1580
Acc36I	ACCTGC	1 cut(s)	497
AccB1I	GGYRCC	1 cut(s)	1073
AccB7I	CCANNNNNTGG	1 cut(s)	1259
AccBSI	CCGCTC	2 cut(s)	972, 1068
AccI	GTMKAC	1 cut(s)	1037
AccII	CGCG	3 cut(s)	218, 285, 561
AccIII	TCCGGA	1 cut(s)	496
AclWI	GGATC	5 cut(s)	117, 182, 1220, 1581, 1594
AcoI	YGGCCR	1 cut(s)	57
AcsI	RAATTY	1 cut(s)	679
AcvI	CACGTG	1 cut(s)	610
AcyI	GRCGYC	3 cut(s)	632, 764, 894
AdeI	CACNNNGTG	1 cut(s)	613
AfaI	GTAC	3 cut(s)	374, 434, 461
AfiI	CCNNNNNNNGG	3 cut(s)	136, 830, 1259
AflIII	ACRYGT	1 cut(s)	607
AgsI	TTSAA	8 cut(s)	364, 404, 655, 670, 679, 775, 985, 1266
AjnI	CCWGG	1 cut(s)	1300
AjuI	GAANNNNNNNTTGG	2 cut(s)	1246, 1278
AloI	GAACNNNNNNTCC	4 cut(s)	194, 226, 1339, 1371
AluBI	AGCT	9 cut(s)	771, 846, 979, 1126, 1146, 1199, 1330, 1489, 1673
AluI	AGCT	9 cut(s)	771, 846, 979, 1126, 1146, 1199, 1330, 1489, 1673
Alw21I	GWGCWC	2 cut(s)	1148, 1854
Alw26I	GTCTC	6 cut(s)	398, 466, 747, 1314, 1523, 1542
Alw44I	GTGCAC	1 cut(s)	1850
AlwI	GGATC	5 cut(s)	117, 182, 1220, 1581, 1594
Ama87I	CYCGRG	3 cut(s)	293, 901, 1147
Aor13HI	TCCGGA	1 cut(s)	496
AoxI	GGCC	5 cut(s)	57, 69, 366, 957, 1723
ApaLI	GTGCAC	1 cut(s)	1850
ApeKI	GCWGC	4 cut(s)	415, 1199, 1739, 1799
ApoI	RAATTY	1 cut(s)	679
AseI	ATTAAT	1 cut(s)	1283
Asp700I	GAANNNNTTC	2 cut(s)	98, 1284
AspA2I	CCTAGG	1 cut(s)	695
AspS9I	GGNCC	4 cut(s)	82, 957, 1049, 1724
AsuC2I	CCSGG	3 cut(s)	107, 991, 1727
AsuHPI	GGTGA	7 cut(s)	94, 253, 508, 628, 703, 889, 986
AsuNHI	GCTAGC	1 cut(s)	806
AvaI	CYCGRG	3 cut(s)	293, 901, 1147
AvaII	GGWCC	2 cut(s)	82, 1049
AvrII	CCTAGG	1 cut(s)	695
AxyI	CCTNAGG	1 cut(s)	1230
BaeGI	GKGCMC	1 cut(s)	1854
BalI	TGGCCA	1 cut(s)	59
BamHI	GGATCC	1 cut(s)	1586
BanI	GGYRCC	1 cut(s)	1073
BanII	GRGCYC	2 cut(s)	1148, 1938
BarI	GAAGNNNNNNTAC	2 cut(s)	356, 388
BauI	CACGAG	1 cut(s)	744
BbrPI	CACGTG	1 cut(s)	610
BbsI	GAAGAC	2 cut(s)	1413, 1754
Bbv12I	GWGCWC	2 cut(s)	1148, 1854
BbvI	GCAGC	4 cut(s)	402, 1186, 1726, 1786
BccI	CCATC	2 cut(s)	521, 1390
BceAI	ACGGC	5 cut(s)	91, 134, 391, 847, 1739
BcgI	CGANNNNNNTGC	2 cut(s)	14, 48
BciT130I	CCWGG	1 cut(s)	1302
BclI	TGATCA	2 cut(s)	3, 303
BcnI	CCSGG	3 cut(s)	107, 991, 1727
BcoDI	GTCTC	6 cut(s)	398, 466, 747, 1314, 1523, 1542
BfaI	CTAG	6 cut(s)	696, 807, 1331, 1458, 1637, 1939
BfmI	CTRYAG	1 cut(s)	230
BfuAI	ACCTGC	1 cut(s)	497
BglII	AGATCT	1 cut(s)	96
BlnI	CCTAGG	1 cut(s)	695
Bme1390I	CCNGG	4 cut(s)	107, 991, 1302, 1727
Bme18I	GGWCC	2 cut(s)	82, 1049
BmeT110I	CYCGRG	3 cut(s)	293, 901, 1147
BmgT120I	GGNCC	4 cut(s)	82, 957, 1049, 1724
BmiI	GGNNCC	4 cut(s)	511, 958, 1075, 1588
BmrFI	CCNGG	4 cut(s)	107, 991, 1302, 1727
BmsI	GCATC	5 cut(s)	132, 568, 710, 1376, 1597
BmtI	GCTAGC	1 cut(s)	810
BpiI	GAAGAC	2 cut(s)	1413, 1754
BplI	GAGNNNNNCTC	2 cut(s)	713, 745
BpmI	CTGGAG	1 cut(s)	1498
BpuMI	CCSGG	3 cut(s)	107, 991, 1727
BsaAI	YACGTR	2 cut(s)	55, 610
BsaBI	GATNNNNATC	1 cut(s)	1591
BsaHI	GRCGYC	3 cut(s)	632, 764, 894
BsaI	GGTCTC	2 cut(s)	398, 1542
BsaWI	WCCGGW	3 cut(s)	8, 84, 496
BsaXI	ACNNNNNCTCC	4 cut(s)	1135, 1165, 1496, 1526
Bsc4I	CCNNNNNNNGG	3 cut(s)	136, 830, 1259
Bse118I	RCCGGY	2 cut(s)	713, 1088
Bse1I	ACTGG	3 cut(s)	208, 1083, 1515
Bse21I	CCTNAGG	1 cut(s)	1230
Bse3DI	GCAATG	1 cut(s)	1707
Bse8I	GATNNNNATC	1 cut(s)	1591
BseAI	TCCGGA	1 cut(s)	496
BseBI	CCWGG	1 cut(s)	1302
BseGI	GGATG	1 cut(s)	306
BseJI	GATNNNNATC	1 cut(s)	1591
BseLI	CCNNNNNNNGG	3 cut(s)	136, 830, 1259
BseMI	GCAATG	1 cut(s)	1707
BseNI	ACTGG	3 cut(s)	208, 1083, 1515
BseRI	GAGGAG	1 cut(s)	938
BseSI	GKGCMC	1 cut(s)	1854
BseXI	GCAGC	4 cut(s)	402, 1186, 1726, 1786
BsgI	GTGCAG	1 cut(s)	1128
Bsh1236I	CGCG	3 cut(s)	218, 285, 561
BshFI	GGCC	5 cut(s)	59, 71, 368, 959, 1725
BshNI	GGYRCC	1 cut(s)	1073
BsiHKAI	GWGCWC	2 cut(s)	1148, 1854
BsiHKCI	CYCGRG	3 cut(s)	293, 901, 1147
BslI	CCNNNNNNNGG	3 cut(s)	136, 830, 1259
BsmAI	GTCTC	6 cut(s)	398, 466, 747, 1314, 1523, 1542
BsmBI	CGTCTC	2 cut(s)	747, 1314
BsmI	GAATGC	3 cut(s)	351, 1278, 1893
BsnI	GGCC	5 cut(s)	59, 71, 368, 959, 1725
Bso31I	GGTCTC	2 cut(s)	398, 1542
BsoBI	CYCGRG	3 cut(s)	293, 901, 1147
Bsp1286I	GDGCHC	3 cut(s)	1148, 1854, 1938
Bsp13I	TCCGGA	1 cut(s)	496
Bsp143I	GATC	9 cut(s)	3, 96, 109, 187, 303, 623, 1225, 1586, 1665
Bsp19I	CCATGG	2 cut(s)	198, 639
BspANI	GGCC	5 cut(s)	59, 71, 368, 959, 1725
BspEI	TCCGGA	1 cut(s)	496
BspFNI	CGCG	3 cut(s)	218, 285, 561
BspHI	TCATGA	1 cut(s)	1452
BspLI	GGNNCC	4 cut(s)	511, 958, 1075, 1588
BspMI	ACCTGC	1 cut(s)	497
BspOI	GCTAGC	1 cut(s)	810
BspPI	GGATC	5 cut(s)	117, 182, 1220, 1581, 1594
BspQI	GCTCTTC	3 cut(s)	317, 452, 1809
BspT107I	GGYRCC	1 cut(s)	1073
BspTNI	GGTCTC	2 cut(s)	398, 1542
BsrBI	CCGCTC	2 cut(s)	972, 1068
BsrDI	GCAATG	1 cut(s)	1707
BsrFI	RCCGGY	2 cut(s)	713, 1088
BsrI	ACTGG	3 cut(s)	208, 1083, 1515
BssAI	RCCGGY	2 cut(s)	713, 1088
BssMI	GATC	9 cut(s)	3, 96, 109, 187, 303, 623, 1225, 1586, 1665
BssNI	GRCGYC	3 cut(s)	632, 764, 894
BssSI	CACGAG	1 cut(s)	744
BssT1I	CCWWGG	5 cut(s)	198, 639, 695, 850, 1522
Bst2BI	CACGAG	1 cut(s)	744
Bst2UI	CCWGG	1 cut(s)	1302
Bst6I	CTCTTC	4 cut(s)	317, 452, 944, 1809
BstACI	GRCGYC	3 cut(s)	632, 764, 894
BstAPI	GCANNNNNTGC	3 cut(s)	1435, 1697, 1736
BstBAI	YACGTR	2 cut(s)	55, 610
BstC8I	GCNNGC	5 cut(s)	37, 563, 808, 1612, 1744
BstDEI	CTNAG	2 cut(s)	1230, 1865
BstDSI	CCRYGG	2 cut(s)	198, 639
BstF5I	GGATG	1 cut(s)	306
BstFNI	CGCG	3 cut(s)	218, 285, 561
BstKTI	GATC	9 cut(s)	6, 99, 112, 190, 306, 626, 1228, 1589, 1668
BstMAI	GTCTC	6 cut(s)	398, 466, 747, 1314, 1523, 1542
BstMBI	GATC	9 cut(s)	3, 96, 109, 187, 303, 623, 1225, 1586, 1665
BstMWI	GCNNNNNNNGC	8 cut(s)	129, 146, 812, 852, 861, 1435, 1697, 1736
BstNI	CCWGG	1 cut(s)	1302
BstNSI	RCATGY	3 cut(s)	1187, 1746, 1784
BstSCI	CCNGG	4 cut(s)	105, 989, 1300, 1725
BstSFI	CTRYAG	1 cut(s)	230
BstSLI	GKGCMC	1 cut(s)	1854
BstUI	CGCG	3 cut(s)	218, 285, 561
BstV1I	GCAGC	4 cut(s)	402, 1186, 1726, 1786
BstV2I	GAAGAC	2 cut(s)	1413, 1754
BstX2I	RGATCY	2 cut(s)	96, 1586
BstXI	CCANNNNNNTGG	1 cut(s)	67
BstYI	RGATCY	2 cut(s)	96, 1586
Bsu36I	CCTNAGG	1 cut(s)	1230
BsuRI	GGCC	5 cut(s)	59, 71, 368, 959, 1725
BtgI	CCRYGG	2 cut(s)	198, 639
BtgZI	GCGATG	2 cut(s)	199, 879
BtsCI	GGATG	1 cut(s)	306
BtsI	GCAGTG	4 cut(s)	1116, 1194, 1737, 1869
BtsIMutI	CAGTG	5 cut(s)	1090, 1116, 1194, 1737, 1869
BveI	ACCTGC	1 cut(s)	497
Cac8I	GCNNGC	5 cut(s)	37, 563, 808, 1612, 1744
CciI	TCATGA	1 cut(s)	1452
Cfr10I	RCCGGY	2 cut(s)	713, 1088
Cfr13I	GGNCC	4 cut(s)	82, 957, 1049, 1724
CpoI	CGGWCCG	1 cut(s)	82
CseI	GACGC	5 cut(s)	412, 567, 621, 753, 883
Csp6I	GTAC	3 cut(s)	373, 433, 460
CspI	CGGWCCG	1 cut(s)	82
CviQI	GTAC	3 cut(s)	373, 433, 460
DdeI	CTNAG	2 cut(s)	1230, 1865
DpnI	GATC	9 cut(s)	5, 98, 111, 189, 305, 625, 1227, 1588, 1667
DpnII	GATC	9 cut(s)	3, 96, 109, 187, 303, 623, 1225, 1586, 1665
DraIII	CACNNNGTG	1 cut(s)	613
EaeI	YGGCCR	1 cut(s)	57
Eam1104I	CTCTTC	4 cut(s)	317, 452, 944, 1809
EarI	CTCTTC	4 cut(s)	317, 452, 944, 1809
EciI	GGCGGA	2 cut(s)	236, 1062
Ecl136II	GAGCTC	1 cut(s)	1146
Eco130I	CCWWGG	5 cut(s)	198, 639, 695, 850, 1522
Eco24I	GRGCYC	2 cut(s)	1148, 1938
Eco31I	GGTCTC	2 cut(s)	398, 1542
Eco47I	GGWCC	2 cut(s)	82, 1049
Eco53kI	GAGCTC	1 cut(s)	1146
Eco72I	CACGTG	1 cut(s)	610
Eco81I	CCTNAGG	1 cut(s)	1230
Eco88I	CYCGRG	3 cut(s)	293, 901, 1147
EcoICRI	GAGCTC	1 cut(s)	1146
EcoRI	GAATTC	1 cut(s)	679
EcoRII	CCWGG	1 cut(s)	1300
EcoT14I	CCWWGG	5 cut(s)	198, 639, 695, 850, 1522
EcoT22I	ATGCAT	1 cut(s)	1278
EcoT38I	GRGCYC	2 cut(s)	1148, 1938
ErhI	CCWWGG	5 cut(s)	198, 639, 695, 850, 1522
Esp3I	CGTCTC	2 cut(s)	747, 1314
FauI	CCCGC	1 cut(s)	848
FauNDI	CATATG	1 cut(s)	1131
FbaI	TGATCA	2 cut(s)	3, 303
FblI	GTMKAC	1 cut(s)	1037
FokI	GGATG	1 cut(s)	313
FriOI	GRGCYC	2 cut(s)	1148, 1938
FspBI	CTAG	6 cut(s)	696, 807, 1331, 1458, 1637, 1939
GsuI	CTGGAG	1 cut(s)	1498
HaeIII	GGCC	5 cut(s)	59, 71, 368, 959, 1725
HgaI	GACGC	5 cut(s)	412, 567, 621, 753, 883
Hin1I	GRCGYC	3 cut(s)	632, 764, 894
HindIII	AAGCTT	1 cut(s)	769
HinfI	GANTC	8 cut(s)	224, 244, 474, 533, 691, 1018, 1297, 1713
HphI	GGTGA	7 cut(s)	94, 253, 508, 628, 703, 889, 986
Hpy166II	GTNNAC	7 cut(s)	435, 532, 749, 871, 1038, 1192, 1852
Hpy188I	TCNGA	8 cut(s)	487, 527, 538, 759, 1017, 1168, 1290, 1606
Hpy188III	TCNNGA	5 cut(s)	361, 497, 746, 1453, 1717
Hpy8I	GTNNAC	7 cut(s)	435, 532, 749, 871, 1038, 1192, 1852
Hpy99I	CGWCG	3 cut(s)	542, 637, 1760
HpyAV	CCTTC	4 cut(s)	358, 1054, 1299, 1337
HpyCH4IV	ACGT	4 cut(s)	54, 272, 540, 609
HpyF10VI	GCNNNNNNNGC	8 cut(s)	129, 146, 812, 852, 861, 1435, 1697, 1736
HpyF3I	CTNAG	2 cut(s)	1230, 1865
HpySE526I	ACGT	4 cut(s)	54, 272, 540, 609
Hsp92I	GRCGYC	3 cut(s)	632, 764, 894
Kpn2I	TCCGGA	1 cut(s)	496
Ksp22I	TGATCA	2 cut(s)	3, 303
Kzo9I	GATC	9 cut(s)	3, 96, 109, 187, 303, 623, 1225, 1586, 1665
LguI	GCTCTTC	3 cut(s)	317, 452, 1809
LmnI	GCTCC	6 cut(s)	122, 1123, 1143, 1218, 1327, 1751
Lsp1109I	GCAGC	4 cut(s)	402, 1186, 1726, 1786
LweI	GCATC	5 cut(s)	132, 568, 710, 1376, 1597
MaeI	CTAG	6 cut(s)	696, 807, 1331, 1458, 1637, 1939
MaeII	ACGT	4 cut(s)	54, 272, 540, 609
MaeIII	GTNAC	2 cut(s)	603, 895
MalI	GATC	9 cut(s)	5, 98, 111, 189, 305, 625, 1227, 1588, 1667
MbiI	CCGCTC	2 cut(s)	972, 1068
MboI	GATC	9 cut(s)	3, 96, 109, 187, 303, 623, 1225, 1586, 1665
MfeI	CAATTG	1 cut(s)	1254
MflI	RGATCY	2 cut(s)	96, 1586
MhlI	GDGCHC	3 cut(s)	1148, 1854, 1938
MlsI	TGGCCA	1 cut(s)	59
MluCI	AATT	7 cut(s)	480, 679, 913, 1254, 1280, 1284, 1575
MluNI	TGGCCA	1 cut(s)	59
MlyI	GAGTC	5 cut(s)	218, 468, 527, 685, 1306
MmeI	TCCRAC	1 cut(s)	561
Mox20I	TGGCCA	1 cut(s)	59
Mph1103I	ATGCAT	1 cut(s)	1278
MroI	TCCGGA	1 cut(s)	496
MroXI	GAANNNNTTC	2 cut(s)	98, 1284
MscI	TGGCCA	1 cut(s)	59
MseI	TTAA	4 cut(s)	479, 552, 801, 1283
MslI	CAYNNNNRTG	3 cut(s)	440, 1552, 1565
Msp20I	TGGCCA	1 cut(s)	59
MspR9I	CCNGG	4 cut(s)	107, 991, 1302, 1727
MunI	CAATTG	1 cut(s)	1254
Mva1269I	GAATGC	3 cut(s)	351, 1278, 1893
MvaI	CCWGG	1 cut(s)	1302
MvnI	CGCG	3 cut(s)	218, 285, 561
MwoI	GCNNNNNNNGC	8 cut(s)	129, 146, 812, 852, 861, 1435, 1697, 1736
NciI	CCSGG	3 cut(s)	107, 991, 1727
NcoI	CCATGG	2 cut(s)	198, 639
NdeI	CATATG	1 cut(s)	1131
NdeII	GATC	9 cut(s)	3, 96, 109, 187, 303, 623, 1225, 1586, 1665
NheI	GCTAGC	1 cut(s)	806
NlaIV	GGNNCC	4 cut(s)	511, 958, 1075, 1588
NmeAIII	GCCGAG	1 cut(s)	607
NmuCI	GTSAC	1 cut(s)	895
NsiI	ATGCAT	1 cut(s)	1278
NspI	RCATGY	3 cut(s)	1187, 1746, 1784
PaeI	GCATGC	1 cut(s)	1746
PaeR7I	CTCGAG	2 cut(s)	293, 1147
PagI	TCATGA	1 cut(s)	1452
PciSI	GCTCTTC	3 cut(s)	317, 452, 1809
PcsI	WCGNNNNNNNCGW	3 cut(s)	632, 737, 1037
PctI	GAATGC	3 cut(s)	351, 1278, 1893
PdmI	GAANNNNTTC	2 cut(s)	98, 1284
PfeI	GAWTC	3 cut(s)	244, 1018, 1713
PflMI	CCANNNNNTGG	1 cut(s)	1259
PfoI	TCCNGGA	1 cut(s)	1300
PleI	GAGTC	5 cut(s)	218, 468, 527, 685, 1305
PmaCI	CACGTG	1 cut(s)	610
PmlI	CACGTG	1 cut(s)	610
PpsI	GAGTC	5 cut(s)	218, 468, 527, 685, 1305
Ppu21I	YACGTR	2 cut(s)	55, 610
PshBI	ATTAAT	1 cut(s)	1283
PsiI	TTATAA	1 cut(s)	1580
Psp124BI	GAGCTC	1 cut(s)	1148
Psp6I	CCWGG	1 cut(s)	1300
PspCI	CACGTG	1 cut(s)	610
PspGI	CCWGG	1 cut(s)	1300
PspN4I	GGNNCC	4 cut(s)	511, 958, 1075, 1588
PspPI	GGNCC	4 cut(s)	82, 957, 1049, 1724
PspXI	VCTCGAGB	2 cut(s)	293, 1147
PsuI	RGATCY	2 cut(s)	96, 1586
RsaI	GTAC	3 cut(s)	374, 434, 461
RsaNI	GTAC	3 cut(s)	373, 433, 460
RseI	CAYNNNNRTG	3 cut(s)	440, 1552, 1565
Rsr2I	CGGWCCG	1 cut(s)	82
RsrII	CGGWCCG	1 cut(s)	82
SacI	GAGCTC	1 cut(s)	1148
SapI	GCTCTTC	3 cut(s)	317, 452, 1809
SaqAI	TTAA	4 cut(s)	479, 552, 801, 1283
Sau3AI	GATC	9 cut(s)	3, 96, 109, 187, 303, 623, 1225, 1586, 1665
Sau96I	GGNCC	4 cut(s)	82, 957, 1049, 1724
SchI	GAGTC	5 cut(s)	218, 468, 527, 685, 1306
ScrFI	CCNGG	4 cut(s)	107, 991, 1302, 1727
SduI	GDGCHC	3 cut(s)	1148, 1854, 1938
SfaNI	GCATC	5 cut(s)	132, 568, 710, 1376, 1597
SfcI	CTRYAG	1 cut(s)	230
Sfr274I	CTCGAG	2 cut(s)	293, 1147
SgrAI	CRCCGGYG	1 cut(s)	713
SinI	GGWCC	2 cut(s)	82, 1049
SlaI	CTCGAG	2 cut(s)	293, 1147
SmiMI	CAYNNNNRTG	3 cut(s)	440, 1552, 1565
SmlI	CTYRAG	2 cut(s)	293, 1147
SmoI	CTYRAG	2 cut(s)	293, 1147
SphI	GCATGC	1 cut(s)	1746
Sse9I	AATT	7 cut(s)	480, 679, 913, 1254, 1280, 1284, 1575
SspI	AATATT	1 cut(s)	1599
SspMI	CTAG	6 cut(s)	696, 807, 1331, 1458, 1637, 1939
SstI	GAGCTC	1 cut(s)	1148
StyD4I	CCNGG	4 cut(s)	105, 989, 1300, 1725
StyI	CCWWGG	5 cut(s)	198, 639, 695, 850, 1522
TaiI	ACGT	4 cut(s)	57, 275, 543, 612
TaqI	TCGA	4 cut(s)	294, 456, 704, 1148
TaqII	GACCGA	2 cut(s)	70, 1748
TasI	AATT	7 cut(s)	480, 679, 913, 1254, 1280, 1284, 1575
TatI	WGTACW	1 cut(s)	459
TauI	GCSGC	6 cut(s)	49, 221, 288, 632, 1071, 1074
TfiI	GAWTC	3 cut(s)	244, 1018, 1713
Tru1I	TTAA	4 cut(s)	479, 552, 801, 1283
Tru9I	TTAA	4 cut(s)	479, 552, 801, 1283
TscAI	CASTG	5 cut(s)	1090, 1116, 1194, 1737, 1876
TseFI	GTSAC	1 cut(s)	895
TseI	GCWGC	4 cut(s)	415, 1199, 1739, 1799
Tsp45I	GTSAC	1 cut(s)	895
TspDTI	ATGAA	8 cut(s)	163, 202, 439, 947, 1118, 1193, 1293, 1636
TspGWI	ACGGA	2 cut(s)	570, 1425
TspRI	CASTG	5 cut(s)	1090, 1116, 1194, 1737, 1876
Van91I	CCANNNNNTGG	1 cut(s)	1259
VneI	GTGCAC	1 cut(s)	1850
VpaK11BI	GGWCC	2 cut(s)	82, 1049
VspI	ATTAAT	1 cut(s)	1283
XapI	RAATTY	1 cut(s)	679
XceI	RCATGY	3 cut(s)	1187, 1746, 1784
XcmI	CCANNNNNNNNNTGG	1 cut(s)	857
XhoI	CTCGAG	2 cut(s)	293, 1147
XmaJI	CCTAGG	1 cut(s)	695
XmiI	GTMKAC	1 cut(s)	1037
XmnI	GAANNNNTTC	2 cut(s)	98, 1284
XspI	CTAG	6 cut(s)	696, 807, 1331, 1458, 1637, 1939
Zsp2I	ATGCAT	1 cut(s)	1278

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.