Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006848

Physical Location & Seq

Genomic Coordinates Forward (+)

15425454 .. 15428300

Gene Structure 2847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ37091

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1923 bp

ATGATCAGCGGAAAGGACATTTACGAGGTCCTTGCGAGCCTTGTGCCGCTTTACGTAGCCATGATCTTGGCCTATGGCTCGGTCCGGTGGTGGAAGATCTTCACCCCGGACCAATGCTCCGGCATCAACCGATTCGTGGCGGTTTTTGCCGTTCCTTTGCTTTCCTTTCACTTAATTTCTTCCAATGATCCGTACGTCATGAACTACCGGTTCATAGCGGCGGACTCGTTGCAGAAAGTGGTGATTCTGGTGGCTCTATTCCTCTGGCAGATCTTCTCCAAGCGCGGCAACCTCGAGTGGATGATCTCGCTCTTCTCCCTCTCGACTCTCCCCAACACTCTCGTCATGGGCATTCCTCTGTTGAAGGCCATGTACGGCGACTTTTCGGCCACTCTCATGGTTCAAATCGTGGTGCTGCAGAGCGTCATCTGGTACACTCTCATGCTCTTCATGTTCGAGTACAGAGGAGCCAAACTCTTGATCTCAGAGCAGTTCCCGGAAACCGCTGGGTCCATCACCTCGTTTCGGGTGGACTCCGACGTCGTTTCGCTTAACGGACGAGAACCTTTGGAGACGGATGCCGAGATTGGAGAGGATGGGAAGTTACATGTGGTGGTGAGAAGATCGGCGGCGTCGTCGATGGTGTCGTCTATCAAGTCGCACGGGTTCAACTCCTTGAATTCCGGCATGACTCCTCGAGCTTCGAACCTGACCGGCGTTGAGATTTATTCCGTTCAGTCGTCTCGTGAACAGACGCCGAGGGCATCCAGCTTCAACCAGGCTGACTTCTACACCATGTTCAATTCCAGAGAGGCGCAGAGCCCTAAACACGGTTGCACCAACAGCTTCAAGGGCGGGTTTGGCGATGTTTACTCGCTCCAGTCATCGAAAGGCGTAGCTCCGAGGACTTCAAATTTTCATGAGGATATGAAGAGAGGGGCAAGGAGCATGAGCGGTGAGCTTTTCAATGCCGGGACGGTGCCTTCGTACCCGCCTCCAAATCCCATGTTTTCGAGGTCTACCAGTGGCGGACCGGAGAAGAAGGAAAGCGGCGGCGCCGGTGCTGGTGCCGTTGTCAGTGGTGGTGCAGTGTCTAATAAGGAGCTTCATATGTTTGTTTGGAGCTCGAGTGCTTCGTCGGTTTCCGAAGGGAGTCAGAAACATGCAGTTAACCGAGCTGCCTCGACTGAATTTGGGGGCATTGATTCTTCTAGGGCTGCTCAACATGATCATCCAATTGCTGGTTCAAGAGGGATGCATGAATTGAGTCAGAATATGAGTTCTGGAAGGAAAATGAGTGGAGATGTCGAGCTCGAAATAGAAGAAGGAACAAAGTTTCCAGCAAGTGCAACCTCATATAGTAGTCGCCATAAGAAGATGGACATGGAAGACGGAGGTGTGACAAAGAAGCAACAGATGCCTCCTGCAAGTGTCATGACTAGGCTTATACTGATCATGGTGTGGAGAAAGCTCATTAGAAATCCCAACAGCTACGCCAGTCTCCTTGGTCTCGCATGGTCTCTCGTATCATACAAGTGGCACATCAAAATGCCCAAAATTGTAAGTGGATCCATATCAATATTATCTGATACTGGCTTAGGGATGGCTATGTTCAGTCTAGGTTTATTCATGGCTTTGCAACCAAAGATCATAGCTTGTGGAAAAGCAGTAGCAACATTCGGAATGGCTGTTAGGTTCTTGATAGGCCCAGCAGTGATTGCTGCATGCTCCGTAGCTGTTGGTCTTCGTGGAGTTCTTTTGCGTGTTGCAATACTTCAGGCTGCTCTTCCTCAAGGGATTGTTCCTTTTGTATTTGCCAAAGAATACAATGTTCACGCAGACATACTTAGCACTGCGGTCATTTTTGGAATGTTGCTTGCCTTGCCTGTGACAATAGTCTACTATATTCTCATCGGACTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0001666 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0006810 GO:0006950 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009743 GO:0009746 GO:0009749 GO:0009914 GO:0009921 GO:0009925 GO:0009926 GO:0009958 GO:0009966 GO:0010033 GO:0010252 GO:0010315 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0015562 GO:0016020 GO:0016323 GO:0022857 GO:0023051 GO:0032991 GO:0034284 GO:0036293 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045178 GO:0048583 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0070482 GO:0071944 GO:0080161 GO:0098590 GO:0098796 GO:0098797 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mem_trans

Protein Analysis

640

Amino Acids

69.41

Weight (kDa)

9.33

Isoelectric Point (pI)

46.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mem_trans	PF03547	10 - 635	1.1e-117	Membrane transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0006848)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57090 AT5G57090
fragaria_vesca	FvH4_4g06870
malus_domestica	MD13G1239200.v1.1 MD16G1244500.v1.1
prunus_persica	Prupe.1G071700_v2.0.a1 Prupe.1G071800_v2.0.a1
pyrus_communis	pycom16g20590
rosa_chinensis	RchiOBHm_Chr4g0398751 RchiOBHm_Chr4g0398781
rosa_laevigata	RLG00000009323 RLG00000009324
rosa_multiflora	Rmu_sc0000458.1_g000007
rosa_roxburghii	Rroxscaffold_5G00343700 Rroxscaffold_5G00343710
rosa_rugosa	Rorug04G0011300 Rorug04G0011400
rosa_samantha	Rh4AG089200 Rh4AG089300 Rh4BG086600 Rh4CG097200 Rh4CG097400 Rh4DG080900 Rh4DG081100
rosa_wichuraiana	Rw4G007370 Rw4G007380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	539
AatII	GACGTC	1 cut(s)	543
AccB1I	GGYRCC	3 cut(s)	979, 1055, 1067
AccB7I	CCANNNNNTGG	1 cut(s)	1241
AccBSI	CCGCTC	1 cut(s)	954
AccI	GTMKAC	2 cut(s)	1019, 1899
AccII	CGCG	1 cut(s)	285
AclWI	GGATC	3 cut(s)	182, 1563, 1576
AcoI	YGGCCR	1 cut(s)	387
AcsI	RAATTY	3 cut(s)	679, 913, 1190
AcuI	CTGAAG	1 cut(s)	1760
AcyI	GRCGYC	4 cut(s)	540, 632, 755, 1056
AfaI	GTAC	5 cut(s)	194, 374, 434, 461, 989
AfiI	CCNNNNNNNGG	4 cut(s)	136, 525, 830, 1241
AflIII	ACRYGT	1 cut(s)	607
AgeI	ACCGGT	1 cut(s)	207
AjnI	CCWGG	1 cut(s)	777
AjuI	GAANNNNNNNTTGG	2 cut(s)	1228, 1260
AloI	GAACNNNNNNTCC	2 cut(s)	1321, 1353
Alw21I	GWGCWC	2 cut(s)	1127, 1314
Alw26I	GTCTC	5 cut(s)	566, 747, 1505, 1514, 1524
AlwI	GGATC	3 cut(s)	182, 1563, 1576
Ama87I	CYCGRG	3 cut(s)	293, 696, 1126
AoxI	GGCC	4 cut(s)	69, 366, 387, 1705
ApeKI	GCWGC	5 cut(s)	415, 1178, 1217, 1721, 1781
ApoI	RAATTY	3 cut(s)	679, 913, 1190
ArsI	GACNNNNNNTTYG	2 cut(s)	967, 999
AsiGI	ACCGGT	1 cut(s)	207
Asp700I	GAANNNNTTC	1 cut(s)	98
AspLEI	GCGC	3 cut(s)	285, 817, 1058
AspS9I	GGNCC	6 cut(s)	28, 82, 109, 510, 1031, 1706
AsuC2I	CCSGG	3 cut(s)	107, 497, 973
AsuHPI	GGTGA	5 cut(s)	94, 253, 508, 628, 968
AsuII	TTCGAA	1 cut(s)	704
AvaI	CYCGRG	3 cut(s)	293, 696, 1126
AvaII	GGWCC	5 cut(s)	28, 82, 109, 510, 1031
BamHI	GGATCC	1 cut(s)	1568
BanI	GGYRCC	3 cut(s)	979, 1055, 1067
BanII	GRGCYC	3 cut(s)	824, 1127, 1314
BarI	GAAGNNNNNNTAC	2 cut(s)	356, 388
BauI	CACGAG	1 cut(s)	744
BbsI	GAAGAC	2 cut(s)	1395, 1736
Bbv12I	GWGCWC	2 cut(s)	1127, 1314
BbvI	GCAGC	5 cut(s)	402, 1165, 1204, 1708, 1768
BccI	CCATC	5 cut(s)	521, 590, 634, 1372, 1597
BceAI	ACGGC	3 cut(s)	134, 391, 1055
BcgI	CGANNNNNNTGC	4 cut(s)	14, 25, 48, 59
BciT130I	CCWGG	1 cut(s)	779
BclI	TGATCA	3 cut(s)	3, 1228, 1452
BcnI	CCSGG	3 cut(s)	107, 497, 973
BcoDI	GTCTC	5 cut(s)	566, 747, 1505, 1514, 1524
BfaI	CTAG	4 cut(s)	1212, 1440, 1619, 1921
BfmI	CTRYAG	1 cut(s)	416
BfoI	RGCGCY	1 cut(s)	1059
BglII	AGATCT	2 cut(s)	96, 270
Bme1390I	CCNGG	4 cut(s)	107, 497, 779, 973
Bme18I	GGWCC	5 cut(s)	28, 82, 109, 510, 1031
BmeT110I	CYCGRG	3 cut(s)	293, 696, 1126
BmgT120I	GGNCC	6 cut(s)	28, 82, 109, 510, 1031, 1706
BmiI	GGNNCC	6 cut(s)	469, 511, 981, 1057, 1069, 1570
BmrFI	CCNGG	4 cut(s)	107, 497, 779, 973
BmsI	GCATC	5 cut(s)	132, 568, 773, 1245, 1407
BoxI	GACNNNNGTC	1 cut(s)	1895
BpiI	GAAGAC	2 cut(s)	1395, 1736
BplI	GAGNNNNNCTC	2 cut(s)	459, 491
BpmI	CTGGAG	1 cut(s)	863
Bpu10I	CCTNAGC	1 cut(s)	1597
Bpu14I	TTCGAA	1 cut(s)	704
BpuEI	CTTGAG	1 cut(s)	1776
BpuMI	CCSGG	3 cut(s)	107, 497, 973
BsaAI	YACGTR	1 cut(s)	55
BsaBI	GATNNNNATC	1 cut(s)	1573
BsaHI	GRCGYC	4 cut(s)	540, 632, 755, 1056
BsaI	GGTCTC	2 cut(s)	1514, 1524
BsaJI	CCNNGG	4 cut(s)	105, 758, 902, 1504
BsaWI	WCCGGW	3 cut(s)	84, 207, 1033
BsaXI	ACNNNNNCTCC	4 cut(s)	101, 131, 1114, 1144
Bsc4I	CCNNNNNNNGG	4 cut(s)	136, 525, 830, 1241
Bse118I	RCCGGY	3 cut(s)	207, 713, 1058
Bse1I	ACTGG	4 cut(s)	880, 1023, 1497, 1597
Bse8I	GATNNNNATC	1 cut(s)	1573
BseBI	CCWGG	1 cut(s)	779
BseDI	CCNNGG	4 cut(s)	105, 758, 902, 1504
BseGI	GGATG	7 cut(s)	306, 583, 601, 764, 1231, 1260, 1608
BseJI	GATNNNNATC	1 cut(s)	1573
BseLI	CCNNNNNNNGG	4 cut(s)	136, 525, 830, 1241
BseMII	CTCAG	1 cut(s)	498
BseNI	ACTGG	4 cut(s)	880, 1023, 1497, 1597
BseRI	GAGGAG	2 cut(s)	480, 684
BseXI	GCAGC	5 cut(s)	402, 1165, 1204, 1708, 1768
BseYI	CCCAGC	2 cut(s)	506, 1708
BsgI	GTGCAG	1 cut(s)	1107
Bsh1236I	CGCG	1 cut(s)	285
BshFI	GGCC	4 cut(s)	71, 368, 389, 1707
BshNI	GGYRCC	3 cut(s)	979, 1055, 1067
BshTI	ACCGGT	1 cut(s)	207
BsiHKAI	GWGCWC	2 cut(s)	1127, 1314
BsiHKCI	CYCGRG	3 cut(s)	293, 696, 1126
BsiWI	CGTACG	1 cut(s)	192
BslFI	GGGAC	1 cut(s)	988
BslI	CCNNNNNNNGG	4 cut(s)	136, 525, 830, 1241
BsmAI	GTCTC	5 cut(s)	566, 747, 1505, 1514, 1524
BsmBI	CGTCTC	2 cut(s)	566, 747
BsmFI	GGGAC	1 cut(s)	988
BsmI	GAATGC	1 cut(s)	351
BsnI	GGCC	4 cut(s)	71, 368, 389, 1707
Bso31I	GGTCTC	2 cut(s)	1514, 1524
BsoBI	CYCGRG	3 cut(s)	293, 696, 1126
Bsp119I	TTCGAA	1 cut(s)	704
Bsp1286I	GDGCHC	3 cut(s)	824, 1127, 1314
BspANI	GGCC	4 cut(s)	71, 368, 389, 1707
BspCNI	CTCAG	1 cut(s)	497
BspFNI	CGCG	1 cut(s)	285
BspHI	TCATGA	3 cut(s)	198, 919, 1434
BspLI	GGNNCC	6 cut(s)	469, 511, 981, 1057, 1069, 1570
BspMAI	CTGCAG	1 cut(s)	420
BspPI	GGATC	3 cut(s)	182, 1563, 1576
BspQI	GCTCTTC	3 cut(s)	317, 452, 1791
BspT104I	TTCGAA	1 cut(s)	704
BspT107I	GGYRCC	3 cut(s)	979, 1055, 1067
BspTNI	GGTCTC	2 cut(s)	1514, 1524
BsrBI	CCGCTC	1 cut(s)	954
BsrFI	RCCGGY	3 cut(s)	207, 713, 1058
BsrI	ACTGG	4 cut(s)	880, 1023, 1497, 1597
BssAI	RCCGGY	3 cut(s)	207, 713, 1058
BssECI	CCNNGG	4 cut(s)	105, 758, 902, 1504
BssNI	GRCGYC	4 cut(s)	540, 632, 755, 1056
BssSI	CACGAG	1 cut(s)	744
BssT1I	CCWWGG	1 cut(s)	1504
Bst2BI	CACGAG	1 cut(s)	744
Bst2UI	CCWGG	1 cut(s)	779
Bst4CI	ACNGT	2 cut(s)	833, 979
Bst6I	CTCTTC	4 cut(s)	317, 452, 926, 1791
BstACI	GRCGYC	4 cut(s)	540, 632, 755, 1056
BstAPI	GCANNNNNTGC	2 cut(s)	1417, 1718
BstBAI	YACGTR	1 cut(s)	55
BstBI	TTCGAA	1 cut(s)	704
BstC8I	GCNNGC	3 cut(s)	37, 1726, 1878
BstDEI	CTNAG	3 cut(s)	484, 1597, 1847
BstF5I	GGATG	7 cut(s)	306, 583, 601, 764, 1231, 1260, 1608
BstFNI	CGCG	1 cut(s)	285
BstH2I	RGCGCY	1 cut(s)	1059
BstHHI	GCGC	3 cut(s)	285, 817, 1058
BstMAI	GTCTC	5 cut(s)	566, 747, 1505, 1514, 1524
BstMWI	GCNNNNNNNGC	7 cut(s)	146, 843, 852, 861, 1417, 1718, 1882
BstNI	CCWGG	1 cut(s)	779
BstNSI	RCATGY	3 cut(s)	611, 1166, 1728
BstPAI	GACNNNNGTC	1 cut(s)	1895
BstSCI	CCNGG	4 cut(s)	105, 495, 777, 971
BstSFI	CTRYAG	1 cut(s)	416
BstSNI	TACGTA	1 cut(s)	55
BstUI	CGCG	1 cut(s)	285
BstV1I	GCAGC	5 cut(s)	402, 1165, 1204, 1708, 1768
BstV2I	GAAGAC	2 cut(s)	1395, 1736
BstX2I	RGATCY	3 cut(s)	96, 270, 1568
BstXI	CCANNNNNNTGG	2 cut(s)	67, 397
BstYI	RGATCY	3 cut(s)	96, 270, 1568
BsuRI	GGCC	4 cut(s)	71, 368, 389, 1707
BtgZI	GCGATG	1 cut(s)	879
BtsCI	GGATG	7 cut(s)	306, 583, 601, 764, 1231, 1260, 1608
BtsI	GCAGTG	3 cut(s)	1095, 1719, 1851
BtsIMutI	CAGTG	5 cut(s)	1030, 1084, 1095, 1719, 1851
Cac8I	GCNNGC	3 cut(s)	37, 1726, 1878
CciI	TCATGA	3 cut(s)	198, 919, 1434
CfoI	GCGC	3 cut(s)	285, 817, 1058
Cfr10I	RCCGGY	3 cut(s)	207, 713, 1058
Cfr13I	GGNCC	6 cut(s)	28, 82, 109, 510, 1031, 1706
CpoI	CGGWCCG	2 cut(s)	82, 1031
CseI	GACGC	3 cut(s)	412, 621, 763
Csp6I	GTAC	5 cut(s)	193, 373, 433, 460, 988
CspAI	ACCGGT	1 cut(s)	207
CspI	CGGWCCG	2 cut(s)	82, 1031
CviQI	GTAC	5 cut(s)	193, 373, 433, 460, 988
DdeI	CTNAG	3 cut(s)	484, 1597, 1847
DinI	GGCGCC	1 cut(s)	1057
DrdI	GACNNNNNNGTC	1 cut(s)	539
DseDI	GACNNNNNNGTC	1 cut(s)	539
EaeI	YGGCCR	1 cut(s)	387
Eam1104I	CTCTTC	4 cut(s)	317, 452, 926, 1791
EarI	CTCTTC	4 cut(s)	317, 452, 926, 1791
EciI	GGCGGA	2 cut(s)	236, 1044
Ecl136II	GAGCTC	2 cut(s)	1125, 1312
Eco105I	TACGTA	1 cut(s)	55
Eco130I	CCWWGG	1 cut(s)	1504
Eco24I	GRGCYC	3 cut(s)	824, 1127, 1314
Eco31I	GGTCTC	2 cut(s)	1514, 1524
Eco47I	GGWCC	5 cut(s)	28, 82, 109, 510, 1031
Eco53kI	GAGCTC	2 cut(s)	1125, 1312
Eco57I	CTGAAG	1 cut(s)	1760
Eco88I	CYCGRG	3 cut(s)	293, 696, 1126
EcoICRI	GAGCTC	2 cut(s)	1125, 1312
EcoO109I	RGGNCCY	1 cut(s)	28
EcoRI	GAATTC	1 cut(s)	679
EcoRII	CCWGG	1 cut(s)	777
EcoT14I	CCWWGG	1 cut(s)	1504
EcoT22I	ATGCAT	1 cut(s)	1260
EcoT38I	GRGCYC	3 cut(s)	824, 1127, 1314
EgeI	GGCGCC	1 cut(s)	1057
EheI	GGCGCC	1 cut(s)	1057
ErhI	CCWWGG	1 cut(s)	1504
Esp3I	CGTCTC	2 cut(s)	566, 747
FaqI	GGGAC	1 cut(s)	988
FauI	CCCGC	2 cut(s)	848, 999
FauNDI	CATATG	1 cut(s)	1110
FbaI	TGATCA	3 cut(s)	3, 1228, 1452
FblI	GTMKAC	2 cut(s)	1019, 1899
FokI	GGATG	7 cut(s)	313, 590, 608, 751, 1218, 1267, 1615
FriOI	GRGCYC	3 cut(s)	824, 1127, 1314
FspBI	CTAG	4 cut(s)	1212, 1440, 1619, 1921
GlaI	GCGC	3 cut(s)	284, 816, 1057
GsaI	CCCAGC	2 cut(s)	510, 1712
GsuI	CTGGAG	1 cut(s)	863
HaeII	RGCGCY	1 cut(s)	1059
HaeIII	GGCC	4 cut(s)	71, 368, 389, 1707
HgaI	GACGC	3 cut(s)	412, 621, 763
HhaI	GCGC	3 cut(s)	285, 817, 1058
Hin1I	GRCGYC	4 cut(s)	540, 632, 755, 1056
Hin6I	GCGC	3 cut(s)	283, 815, 1056
HinP1I	GCGC	3 cut(s)	283, 815, 1056
HincII	GTYRAC	1 cut(s)	1171
HindII	GTYRAC	1 cut(s)	1171
HpaI	GTTAAC	1 cut(s)	1171
HphI	GGTGA	5 cut(s)	94, 253, 508, 628, 968
Hpy166II	GTNNAC	8 cut(s)	435, 532, 749, 871, 1020, 1171, 1834, 1900
Hpy188I	TCNGA	9 cut(s)	487, 538, 903, 1147, 1158, 1272, 1588, 1682, 1916
Hpy8I	GTNNAC	8 cut(s)	435, 532, 749, 871, 1020, 1171, 1834, 1900
Hpy99I	CGWCG	5 cut(s)	542, 545, 637, 640, 1141
HpyAV	CCTTC	6 cut(s)	358, 993, 1036, 1142, 1281, 1319
HpyCH4III	ACNGT	2 cut(s)	833, 979
HpyCH4IV	ACGT	3 cut(s)	54, 195, 540
HpyF10VI	GCNNNNNNNGC	7 cut(s)	146, 843, 852, 861, 1417, 1718, 1882
HpyF3I	CTNAG	3 cut(s)	484, 1597, 1847
HpySE526I	ACGT	3 cut(s)	54, 195, 540
Hsp92I	GRCGYC	4 cut(s)	540, 632, 755, 1056
HspAI	GCGC	3 cut(s)	283, 815, 1056
KasI	GGCGCC	1 cut(s)	1055
Ksp22I	TGATCA	3 cut(s)	3, 1228, 1452
KspAI	GTTAAC	1 cut(s)	1171
LguI	GCTCTTC	3 cut(s)	317, 452, 1791
LmnI	GCTCC	8 cut(s)	122, 467, 882, 904, 945, 1102, 1122, 1733
Lsp1109I	GCAGC	5 cut(s)	402, 1165, 1204, 1708, 1768
LweI	GCATC	5 cut(s)	132, 568, 773, 1245, 1407
MaeI	CTAG	4 cut(s)	1212, 1440, 1619, 1921
MaeII	ACGT	3 cut(s)	54, 195, 540
MaeIII	GTNAC	3 cut(s)	603, 1399, 1888
MbiI	CCGCTC	1 cut(s)	954
MfeI	CAATTG	1 cut(s)	1236
MflI	RGATCY	3 cut(s)	96, 270, 1568
MhlI	GDGCHC	3 cut(s)	824, 1127, 1314
MluCI	AATT	8 cut(s)	174, 679, 802, 913, 1190, 1236, 1262, 1557
Mly113I	GGCGCC	1 cut(s)	1056
MlyI	GAGTC	7 cut(s)	218, 319, 527, 685, 1162, 1276, 1911
MmeI	TCCRAC	1 cut(s)	561
Mph1103I	ATGCAT	1 cut(s)	1260
MroXI	GAANNNNTTC	1 cut(s)	98
MseI	TTAA	3 cut(s)	173, 552, 1170
MslI	CAYNNNNRTG	4 cut(s)	395, 440, 1534, 1547
MspA1I	CMGCKG	2 cut(s)	9, 506
MspR9I	CCNGG	4 cut(s)	107, 497, 779, 973
MunI	CAATTG	1 cut(s)	1236
Mva1269I	GAATGC	1 cut(s)	351
MvaI	CCWGG	1 cut(s)	779
MvnI	CGCG	1 cut(s)	285
MwoI	GCNNNNNNNGC	7 cut(s)	146, 843, 852, 861, 1417, 1718, 1882
NarI	GGCGCC	1 cut(s)	1056
NciI	CCSGG	3 cut(s)	107, 497, 973
NdeI	CATATG	1 cut(s)	1110
NlaIV	GGNNCC	6 cut(s)	469, 511, 981, 1057, 1069, 1570
NmeAIII	GCCGAG	2 cut(s)	607, 783
NmuCI	GTSAC	2 cut(s)	1399, 1888
NsiI	ATGCAT	1 cut(s)	1260
NspI	RCATGY	3 cut(s)	611, 1166, 1728
NspV	TTCGAA	1 cut(s)	704
PaeI	GCATGC	1 cut(s)	1728
PaeR7I	CTCGAG	3 cut(s)	293, 696, 1126
PagI	TCATGA	3 cut(s)	198, 919, 1434
PciI	ACATGT	1 cut(s)	607
PciSI	GCTCTTC	3 cut(s)	317, 452, 1791
PcsI	WCGNNNNNNNCGW	4 cut(s)	632, 644, 983, 1133
PctI	GAATGC	1 cut(s)	351
PdmI	GAANNNNTTC	1 cut(s)	98
PfeI	GAWTC	3 cut(s)	132, 244, 1205
Pfl23II	CGTACG	1 cut(s)	192
PflMI	CCANNNNNTGG	1 cut(s)	1241
PfoI	TCCNGGA	1 cut(s)	495
PinAI	ACCGGT	1 cut(s)	207
PleI	GAGTC	7 cut(s)	218, 319, 527, 685, 1161, 1275, 1911
PluTI	GGCGCC	1 cut(s)	1059
PpsI	GAGTC	7 cut(s)	218, 319, 527, 685, 1161, 1275, 1911
Ppu21I	YACGTR	1 cut(s)	55
PpuMI	RGGWCCY	1 cut(s)	28
PscI	ACATGT	1 cut(s)	607
PshAI	GACNNNNGTC	1 cut(s)	1895
Psp124BI	GAGCTC	2 cut(s)	1127, 1314
Psp5II	RGGWCCY	1 cut(s)	28
Psp6I	CCWGG	1 cut(s)	777
PspFI	CCCAGC	2 cut(s)	506, 1708
PspGI	CCWGG	1 cut(s)	777
PspLI	CGTACG	1 cut(s)	192
PspN4I	GGNNCC	6 cut(s)	469, 511, 981, 1057, 1069, 1570
PspPI	GGNCC	6 cut(s)	28, 82, 109, 510, 1031, 1706
PspPPI	RGGWCCY	1 cut(s)	28
PspXI	VCTCGAGB	3 cut(s)	293, 696, 1126
PstI	CTGCAG	1 cut(s)	420
PsuI	RGATCY	3 cut(s)	96, 270, 1568
RsaI	GTAC	5 cut(s)	194, 374, 434, 461, 989
RsaNI	GTAC	5 cut(s)	193, 373, 433, 460, 988
RseI	CAYNNNNRTG	4 cut(s)	395, 440, 1534, 1547
Rsr2I	CGGWCCG	2 cut(s)	82, 1031
RsrII	CGGWCCG	2 cut(s)	82, 1031
SacI	GAGCTC	2 cut(s)	1127, 1314
SapI	GCTCTTC	3 cut(s)	317, 452, 1791
SaqAI	TTAA	3 cut(s)	173, 552, 1170
Sau96I	GGNCC	6 cut(s)	28, 82, 109, 510, 1031, 1706
SchI	GAGTC	7 cut(s)	218, 319, 527, 685, 1162, 1276, 1911
ScrFI	CCNGG	4 cut(s)	107, 497, 779, 973
SduI	GDGCHC	3 cut(s)	824, 1127, 1314
SfaNI	GCATC	5 cut(s)	132, 568, 773, 1245, 1407
SfcI	CTRYAG	1 cut(s)	416
SfoI	GGCGCC	1 cut(s)	1057
Sfr274I	CTCGAG	3 cut(s)	293, 696, 1126
SfuI	TTCGAA	1 cut(s)	704
SgrAI	CRCCGGYG	1 cut(s)	1058
SinI	GGWCC	5 cut(s)	28, 82, 109, 510, 1031
SlaI	CTCGAG	3 cut(s)	293, 696, 1126
SmiMI	CAYNNNNRTG	4 cut(s)	395, 440, 1534, 1547
SmlI	CTYRAG	4 cut(s)	293, 696, 1126, 1791
SmoI	CTYRAG	4 cut(s)	293, 696, 1126, 1791
SnaBI	TACGTA	1 cut(s)	55
SphI	GCATGC	1 cut(s)	1728
Sse9I	AATT	8 cut(s)	174, 679, 802, 913, 1190, 1236, 1262, 1557
SspDI	GGCGCC	1 cut(s)	1055
SspI	AATATT	1 cut(s)	1581
SspMI	CTAG	4 cut(s)	1212, 1440, 1619, 1921
SstI	GAGCTC	2 cut(s)	1127, 1314
StyD4I	CCNGG	4 cut(s)	105, 495, 777, 971
StyI	CCWWGG	1 cut(s)	1504
TaaI	ACNGT	2 cut(s)	833, 979
TaiI	ACGT	3 cut(s)	57, 198, 543
TaqII	GACCGA	1 cut(s)	70
TasI	AATT	8 cut(s)	174, 679, 802, 913, 1190, 1236, 1262, 1557
TatI	WGTACW	1 cut(s)	459
TauI	GCSGC	6 cut(s)	49, 221, 288, 632, 1053, 1056
TfiI	GAWTC	3 cut(s)	132, 244, 1205
Tru1I	TTAA	3 cut(s)	173, 552, 1170
Tru9I	TTAA	3 cut(s)	173, 552, 1170
TscAI	CASTG	5 cut(s)	1030, 1084, 1095, 1719, 1858
TseFI	GTSAC	2 cut(s)	1399, 1888
TseI	GCWGC	5 cut(s)	415, 1178, 1217, 1721, 1781
Tsp45I	GTSAC	2 cut(s)	1399, 1888
TspDTI	ATGAA	8 cut(s)	202, 215, 439, 908, 944, 1097, 1275, 1618
TspGWI	ACGGA	6 cut(s)	180, 570, 590, 721, 1407, 1720
TspRI	CASTG	5 cut(s)	1030, 1084, 1095, 1719, 1858
Van91I	CCANNNNNTGG	1 cut(s)	1241
VpaK11BI	GGWCC	5 cut(s)	28, 82, 109, 510, 1031
XapI	RAATTY	3 cut(s)	679, 913, 1190
XceI	RCATGY	3 cut(s)	611, 1166, 1728
XhoI	CTCGAG	3 cut(s)	293, 696, 1126
XmiI	GTMKAC	2 cut(s)	1019, 1899
XmnI	GAANNNNTTC	1 cut(s)	98
XspI	CTAG	4 cut(s)	1212, 1440, 1619, 1921
ZraI	GACGTC	1 cut(s)	541
Zsp2I	ATGCAT	1 cut(s)	1260

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.