Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0006848

Physical Location & Seq

Genomic Coordinates Forward (+)

13369330 .. 13372151

Gene Structure 2822 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00343710.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGATCAGCGGAAAGGACATTTACGAGGTCCTTGCAAGCATTGTGCCGCTTTACGTGGCCATGATCTTGGCCTACGGCTCGGTCCGGTGGTGGAAGATCTTCACCCCGGACCAGTGCTCCGGCATCAACCGCTTCGTGGCGGTTTTTGCGGTTCCTTTGCTTTCATTTCACTTCATTTCTTCCAACGATCCCTACGCCATGGACTACCAGTTCATCGCTGCAGACTCGTTGCAGAAAGTGGTGATTCTTGTGGCTCTATTCCTCTGGCAGACCTTCTCCAAGCGCGGCAACCTCGAGTGGATGATCACGCTCTTCTCCCTTTCCACTCTTCCCAACACTCTCGTCATGGGAATTCCTCTCTTGAAAGCCATGTACGGCGACTTTTCAGGCGCTCTTATGGTTCAAATCGTGGTGCTGCAGAGCGTCATCTGGTACACTCTCATGCTCTTCATGTTCGAGTACAGAGGAGCCAAACTCTTGATCTCAGAGCAGTTCCCGGAAACCGCCGGGTCCATTACCTCGTTTCGAGTGGACTCCGACGTCGTTTCGCTTAACGGACGCGAGCCTTTGCAGACCGATGCCGAGATCGGAGAGGATGGAAAGTTACACGTGGTGGTGAGAAGATCGGCGGCGGCGTCGATGGTGTCGTCTTTCAAGTCGCACGGGTTGAACTCTTTGAATTCCGGCATGACTCCTCGGGCTTCGAACCTGACCGGCGTTGAGATTTACTCCGTTCAGTCGTCTCGTGAGCCGACACCGAGGGCGTCCAGCTTCAACCAGACTGACTTCTACGCCATGTTCAATGCCAGCAAGGCGCCGAGCCCTAAACACGGCTACACCAACAGCTTCCAGGGCGGGTTTGGCGATGTTTACTCGGTCCAGTCGTCGAAAGGCGTGACCCCGAGGACTTCGAATTTTGATGAGGAGATGATGAAGATAAGCAACAAGAAGAGAGGGGCCAGGAGCATGAGCGGTGAGCTGTTCAATGCCGGGACCGTGTCCTCGTATCCGCCTCCGAATCCCATGTTTTCGGGGTCTACTAGTGGCGGACCGAAAAAGAAAGAAAGCGGCGGCGCTGGTGCCGTTGCCGGTGGTGGTAGTGGTGGTGCAGTGCCTAATAAGGAGCTTCATATGTTTGTTTGGAGTTCGAGCGCTTCGCCGGTTTCCGAGGGGAATCTGAAACATGCAGTTAACCGAGCTGCCTCTACTGATTTTGGAGGCATTGATCCTTCCAAGGCTGCTCAACATGATCATCCAATTGCTGGTTCAAAAGGGATACATGAATTGATTCAGAATATGAGTCCTGGTAGGAAAATGAGTGGAGATGGGGAGCTGGAAATAGAAGAAGGAACAAAGTTTCCGGCAAGTGCATCTCCATACAGTAGCTGCCAGAAGAAGATGGACATGGAAGACGGAGGTGTGGCAAAGAAGCAACAAATGCCTCCTGCAAGTGTCATGACTAGGCTTATACTCATCATGGTGTGGAGGAAGCTCATTAGAAATCCCAACACCTACTCCAGTCTCCTTGGTGTCGCATGGTGGCACATCAAAATGCCCACAATTATAAGTGGATCCATATCAATATTATCTGACGCTGGCTTGGGGATGGCTATGTTCAGTCTAGGTTTATTCATGGCTTTACAACCAAAGATCATAGCTTGTGGAAAATCAGTAGCAACATTTGCAATGGCTGTTAGGTTCTTGACAGGCCCAGCAGTTATTGCTGCATGCTCCATAGCTGTTGGTCTTCGTGGAGTTCTTTTGCATGTTGCAATAGTTCAGGCTGCTCTTCCTCAAGGGATTGTTCCTTTTGTATTTGCCAAAGAATACAATGTGCACGCAGACATACTTAGCACCGCGGTCATTTTTGGAATGCTGATTGCCTTGCCTATAACAATACTCTACTATATTCTTCTCGGGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0001666 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0006810 GO:0006950 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009743 GO:0009746 GO:0009749 GO:0009914 GO:0009921 GO:0009925 GO:0009926 GO:0009958 GO:0009966 GO:0010033 GO:0010252 GO:0010315 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0015562 GO:0016020 GO:0016323 GO:0022857 GO:0023051 GO:0032991 GO:0034284 GO:0036293 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045178 GO:0048583 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0070482 GO:0071944 GO:0080161 GO:0098590 GO:0098796 GO:0098797 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mem_trans

Protein Analysis

641

Amino Acids

69.03

Weight (kDa)

9.11

Isoelectric Point (pI)

42.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mem_trans	PF03547	10 - 636	3e-116	Membrane transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006848)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57090 AT5G57090
fragaria_vesca	FvH4_4g06870
malus_domestica	MD13G1239200.v1.1 MD16G1244500.v1.1
prunus_persica	Prupe.1G071700_v2.0.a1 Prupe.1G071800_v2.0.a1
pyrus_communis	pycom16g20590
rosa_chinensis	RchiOBHm_Chr4g0398751 RchiOBHm_Chr4g0398781
rosa_laevigata	RLG00000009323 RLG00000009324
rosa_multiflora	Rmu_sc0000458.1_g000007
rosa_roxburghii	Rroxscaffold_5G00343700 Rroxscaffold_5G00343710
rosa_rugosa	Rorug04G0011300 Rorug04G0011400
rosa_samantha	Rh4AG089200 Rh4AG089300 Rh4BG086600 Rh4CG097200 Rh4CG097400 Rh4DG080900 Rh4DG081100
rosa_wichuraiana	Rw4G007370 Rw4G007380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1565
AasI	GACNNNNNNGTC	1 cut(s)	539
AatII	GACGTC	1 cut(s)	543
AccB1I	GGYRCC	2 cut(s)	814, 1079
AccB7I	CCANNNNNTGG	1 cut(s)	1262
AccBSI	CCGCTC	1 cut(s)	972
AccI	GTMKAC	1 cut(s)	1037
AccII	CGCG	3 cut(s)	285, 561, 1859
AclWI	GGATC	4 cut(s)	182, 1220, 1566, 1579
AcoI	YGGCCR	1 cut(s)	57
AcsI	RAATTY	3 cut(s)	351, 679, 913
AcvI	CACGTG	1 cut(s)	610
AcyI	GRCGYC	4 cut(s)	540, 635, 764, 815
AdeI	CACNNNGTG	1 cut(s)	613
AfaI	GTAC	3 cut(s)	374, 434, 461
AfeI	AGCGCT	1 cut(s)	1153
AfiI	CCNNNNNNNGG	3 cut(s)	136, 830, 1262
AflIII	ACRYGT	1 cut(s)	607
AgsI	TTSAA	9 cut(s)	364, 404, 655, 670, 679, 775, 802, 985, 1269
AhlI	ACTAGT	1 cut(s)	1040
AjnI	CCWGG	3 cut(s)	849, 959, 1303
AjuI	GAANNNNNNNTTGG	2 cut(s)	1249, 1281
AloI	GAACNNNNNNTCC	4 cut(s)	194, 226, 1342, 1374
Alw21I	GWGCWC	2 cut(s)	119, 1839
Alw26I	GTCTC	2 cut(s)	747, 1526
Alw44I	GTGCAC	1 cut(s)	1835
AlwI	GGATC	4 cut(s)	182, 1220, 1566, 1579
AlwNI	CAGNNNCTG	1 cut(s)	1386
Ama87I	CYCGRG	4 cut(s)	293, 696, 901, 1916
Aor51HI	AGCGCT	1 cut(s)	1153
AoxI	GGCC	4 cut(s)	57, 69, 957, 1708
ApaLI	GTGCAC	1 cut(s)	1835
ApeKI	GCWGC	7 cut(s)	218, 415, 1199, 1238, 1386, 1724, 1784
ApoI	RAATTY	3 cut(s)	351, 679, 913
Asp700I	GAANNNNTTC	2 cut(s)	98, 1287
AspLEI	GCGC	5 cut(s)	285, 392, 817, 1076, 1154
AspS9I	GGNCC	9 cut(s)	28, 82, 109, 510, 877, 957, 993, 1049, 1709
AsuC2I	CCSGG	4 cut(s)	107, 497, 508, 991
AsuHPI	GGTGA	4 cut(s)	94, 253, 628, 986
AsuII	TTCGAA	2 cut(s)	704, 911
AvaI	CYCGRG	4 cut(s)	293, 696, 901, 1916
AvaII	GGWCC	7 cut(s)	28, 82, 109, 510, 877, 993, 1049
BaeGI	GKGCMC	1 cut(s)	1839
BalI	TGGCCA	1 cut(s)	59
BamHI	GGATCC	1 cut(s)	1571
BanI	GGYRCC	2 cut(s)	814, 1079
BanII	GRGCYC	2 cut(s)	824, 1923
BauI	CACGAG	1 cut(s)	744
BbrPI	CACGTG	1 cut(s)	610
BbsI	GAAGAC	2 cut(s)	1416, 1739
Bbv12I	GWGCWC	2 cut(s)	119, 1839
BbvI	GCAGC	7 cut(s)	205, 402, 1186, 1225, 1373, 1711, 1771
BccI	CCATC	5 cut(s)	590, 634, 1319, 1393, 1600
BceAI	ACGGC	4 cut(s)	91, 391, 847, 1067
BcgI	CGANNNNNNTGC	2 cut(s)	14, 48
BciT130I	CCWGG	3 cut(s)	851, 961, 1305
BciVI	GTATCC	2 cut(s)	1017, 1269
BclI	TGATCA	3 cut(s)	3, 303, 1249
BcnI	CCSGG	4 cut(s)	107, 497, 508, 991
BcoDI	GTCTC	2 cut(s)	747, 1526
BcuI	ACTAGT	1 cut(s)	1040
BfaI	CTAG	4 cut(s)	1041, 1461, 1622, 1924
BfmI	CTRYAG	2 cut(s)	219, 416
BfoI	RGCGCY	4 cut(s)	393, 818, 1077, 1155
BfuI	GTATCC	2 cut(s)	1017, 1269
BglI	GCCNNNNNGGC	1 cut(s)	812
BglII	AGATCT	1 cut(s)	96
Bme1390I	CCNGG	7 cut(s)	107, 497, 508, 851, 961, 991, 1305
Bme18I	GGWCC	7 cut(s)	28, 82, 109, 510, 877, 993, 1049
BmeT110I	CYCGRG	4 cut(s)	293, 696, 901, 1916
BmgT120I	GGNCC	9 cut(s)	28, 82, 109, 510, 877, 957, 993, 1049, 1709
BmiI	GGNNCC	8 cut(s)	153, 469, 511, 816, 958, 994, 1081, 1573
BmrFI	CCNGG	7 cut(s)	107, 497, 508, 851, 961, 991, 1305
BmsI	GCATC	3 cut(s)	132, 568, 1379
BpiI	GAAGAC	2 cut(s)	1416, 1739
BplI	GAGNNNNNCTC	4 cut(s)	459, 491, 713, 745
BpmI	CTGGAG	1 cut(s)	1501
Bpu14I	TTCGAA	2 cut(s)	704, 911
BpuEI	CTTGAG	1 cut(s)	1779
BpuMI	CCSGG	4 cut(s)	107, 497, 508, 991
BsaAI	YACGTR	2 cut(s)	55, 610
BsaBI	GATNNNNATC	1 cut(s)	1576
BsaHI	GRCGYC	4 cut(s)	540, 635, 764, 815
BsaWI	WCCGGW	1 cut(s)	84
BsaXI	ACNNNNNCTCC	4 cut(s)	101, 131, 1499, 1529
Bsc4I	CCNNNNNNNGG	3 cut(s)	136, 830, 1262
Bse118I	RCCGGY	3 cut(s)	713, 1088, 1159
Bse1I	ACTGG	4 cut(s)	112, 208, 880, 1518
Bse3DI	GCAATG	1 cut(s)	1692
Bse8I	GATNNNNATC	1 cut(s)	1576
BseBI	CCWGG	3 cut(s)	851, 961, 1305
BseGI	GGATG	4 cut(s)	306, 601, 1252, 1611
BseJI	GATNNNNATC	1 cut(s)	1576
BseLI	CCNNNNNNNGG	3 cut(s)	136, 830, 1262
BseMI	GCAATG	1 cut(s)	1692
BseMII	CTCAG	1 cut(s)	498
BseNI	ACTGG	4 cut(s)	112, 208, 880, 1518
BseRI	GAGGAG	3 cut(s)	480, 684, 938
BseSI	GKGCMC	1 cut(s)	1839
BseXI	GCAGC	7 cut(s)	205, 402, 1186, 1225, 1373, 1711, 1771
BseYI	CCCAGC	1 cut(s)	1711
BsgI	GTGCAG	1 cut(s)	1128
Bsh1236I	CGCG	3 cut(s)	285, 561, 1859
BshFI	GGCC	4 cut(s)	59, 71, 959, 1710
BshNI	GGYRCC	2 cut(s)	814, 1079
BsiHKAI	GWGCWC	2 cut(s)	119, 1839
BsiHKCI	CYCGRG	4 cut(s)	293, 696, 901, 1916
BslFI	GGGAC	1 cut(s)	1006
BslI	CCNNNNNNNGG	3 cut(s)	136, 830, 1262
BsmAI	GTCTC	2 cut(s)	747, 1526
BsmBI	CGTCTC	1 cut(s)	747
BsmFI	GGGAC	1 cut(s)	1006
BsmI	GAATGC	1 cut(s)	1878
BsnI	GGCC	4 cut(s)	59, 71, 959, 1710
BsoBI	CYCGRG	4 cut(s)	293, 696, 901, 1916
Bsp119I	TTCGAA	2 cut(s)	704, 911
Bsp1286I	GDGCHC	4 cut(s)	119, 824, 1839, 1923
Bsp19I	CCATGG	1 cut(s)	198
BspANI	GGCC	4 cut(s)	59, 71, 959, 1710
BspCNI	CTCAG	1 cut(s)	497
BspFNI	CGCG	3 cut(s)	285, 561, 1859
BspHI	TCATGA	1 cut(s)	1455
BspLI	GGNNCC	8 cut(s)	153, 469, 511, 816, 958, 994, 1081, 1573
BspMAI	CTGCAG	2 cut(s)	223, 420
BspPI	GGATC	4 cut(s)	182, 1220, 1566, 1579
BspQI	GCTCTTC	3 cut(s)	317, 452, 1794
BspT104I	TTCGAA	2 cut(s)	704, 911
BspT107I	GGYRCC	2 cut(s)	814, 1079
BsrBI	CCGCTC	1 cut(s)	972
BsrDI	GCAATG	1 cut(s)	1692
BsrFI	RCCGGY	3 cut(s)	713, 1088, 1159
BsrI	ACTGG	4 cut(s)	112, 208, 880, 1518
BssAI	RCCGGY	3 cut(s)	713, 1088, 1159
BssNI	GRCGYC	4 cut(s)	540, 635, 764, 815
BssSI	CACGAG	1 cut(s)	744
BssT1I	CCWWGG	3 cut(s)	198, 1233, 1525
Bst2BI	CACGAG	1 cut(s)	744
Bst2UI	CCWGG	3 cut(s)	851, 961, 1305
Bst4CI	ACNGT	2 cut(s)	997, 1382
Bst6I	CTCTTC	5 cut(s)	317, 333, 452, 944, 1794
BstACI	GRCGYC	4 cut(s)	540, 635, 764, 815
BstAPI	GCANNNNNTGC	3 cut(s)	1438, 1682, 1721
BstBAI	YACGTR	2 cut(s)	55, 610
BstBI	TTCGAA	2 cut(s)	704, 911
BstC8I	GCNNGC	6 cut(s)	37, 563, 808, 1597, 1729, 1839
BstDEI	CTNAG	2 cut(s)	484, 1850
BstDSI	CCRYGG	2 cut(s)	198, 1857
BstF5I	GGATG	4 cut(s)	306, 601, 1252, 1611
BstFNI	CGCG	3 cut(s)	285, 561, 1859
BstH2I	RGCGCY	4 cut(s)	393, 818, 1077, 1155
BstHHI	GCGC	5 cut(s)	285, 392, 817, 1076, 1154
BstMAI	GTCTC	2 cut(s)	747, 1526
BstMWI	GCNNNNNNNGC	8 cut(s)	129, 146, 812, 852, 861, 1438, 1682, 1721
BstNI	CCWGG	3 cut(s)	851, 961, 1305
BstNSI	RCATGY	3 cut(s)	1187, 1731, 1769
BstSCI	CCNGG	7 cut(s)	105, 495, 506, 849, 959, 989, 1303
BstSFI	CTRYAG	2 cut(s)	219, 416
BstSLI	GKGCMC	1 cut(s)	1839
BstUI	CGCG	3 cut(s)	285, 561, 1859
BstV1I	GCAGC	7 cut(s)	205, 402, 1186, 1225, 1373, 1711, 1771
BstV2I	GAAGAC	2 cut(s)	1416, 1739
BstX2I	RGATCY	2 cut(s)	96, 1571
BstXI	CCANNNNNNTGG	1 cut(s)	67
BstYI	RGATCY	2 cut(s)	96, 1571
BsuI	GTATCC	2 cut(s)	1017, 1269
BsuRI	GGCC	4 cut(s)	59, 71, 959, 1710
BtgI	CCRYGG	2 cut(s)	198, 1857
BtgZI	GCGATG	2 cut(s)	199, 879
BtsCI	GGATG	4 cut(s)	306, 601, 1252, 1611
BtsI	GCAGTG	1 cut(s)	1116
BtsIMutI	CAGTG	2 cut(s)	119, 1116
Cac8I	GCNNGC	6 cut(s)	37, 563, 808, 1597, 1729, 1839
CaiI	CAGNNNCTG	1 cut(s)	1386
CciI	TCATGA	1 cut(s)	1455
CfoI	GCGC	5 cut(s)	285, 392, 817, 1076, 1154
Cfr10I	RCCGGY	3 cut(s)	713, 1088, 1159
Cfr13I	GGNCC	9 cut(s)	28, 82, 109, 510, 877, 957, 993, 1049, 1709
Cfr42I	CCGCGG	1 cut(s)	1860
CpoI	CGGWCCG	2 cut(s)	82, 1049
CseI	GACGC	5 cut(s)	412, 567, 624, 753, 1601
Csp6I	GTAC	3 cut(s)	373, 433, 460
CspI	CGGWCCG	2 cut(s)	82, 1049
CviQI	GTAC	3 cut(s)	373, 433, 460
DdeI	CTNAG	2 cut(s)	484, 1850
DinI	GGCGCC	1 cut(s)	816
DraIII	CACNNNGTG	1 cut(s)	613
DrdI	GACNNNNNNGTC	1 cut(s)	539
DseDI	GACNNNNNNGTC	1 cut(s)	539
EaeI	YGGCCR	1 cut(s)	57
Eam1104I	CTCTTC	5 cut(s)	317, 333, 452, 944, 1794
EarI	CTCTTC	5 cut(s)	317, 333, 452, 944, 1794
EciI	GGCGGA	2 cut(s)	999, 1062
Eco130I	CCWWGG	3 cut(s)	198, 1233, 1525
Eco24I	GRGCYC	2 cut(s)	824, 1923
Eco47I	GGWCC	7 cut(s)	28, 82, 109, 510, 877, 993, 1049
Eco47III	AGCGCT	1 cut(s)	1153
Eco72I	CACGTG	1 cut(s)	610
Eco88I	CYCGRG	4 cut(s)	293, 696, 901, 1916
EcoO109I	RGGNCCY	1 cut(s)	28
EcoRI	GAATTC	2 cut(s)	351, 679
EcoRII	CCWGG	3 cut(s)	849, 959, 1303
EcoT14I	CCWWGG	3 cut(s)	198, 1233, 1525
EcoT38I	GRGCYC	2 cut(s)	824, 1923
EgeI	GGCGCC	1 cut(s)	816
EheI	GGCGCC	1 cut(s)	816
ErhI	CCWWGG	3 cut(s)	198, 1233, 1525
Esp3I	CGTCTC	1 cut(s)	747
FaqI	GGGAC	1 cut(s)	1006
FauI	CCCGC	1 cut(s)	848
FauNDI	CATATG	1 cut(s)	1131
FbaI	TGATCA	3 cut(s)	3, 303, 1249
FblI	GTMKAC	1 cut(s)	1037
FokI	GGATG	4 cut(s)	313, 608, 1239, 1618
FriOI	GRGCYC	2 cut(s)	824, 1923
FspBI	CTAG	4 cut(s)	1041, 1461, 1622, 1924
GlaI	GCGC	5 cut(s)	284, 391, 816, 1075, 1153
GsaI	CCCAGC	1 cut(s)	1715
GsuI	CTGGAG	1 cut(s)	1501
HaeII	RGCGCY	4 cut(s)	393, 818, 1077, 1155
HaeIII	GGCC	4 cut(s)	59, 71, 959, 1710
HgaI	GACGC	5 cut(s)	412, 567, 624, 753, 1601
HhaI	GCGC	5 cut(s)	285, 392, 817, 1076, 1154
Hin1I	GRCGYC	4 cut(s)	540, 635, 764, 815
Hin6I	GCGC	5 cut(s)	283, 390, 815, 1074, 1152
HinP1I	GCGC	5 cut(s)	283, 390, 815, 1074, 1152
HincII	GTYRAC	1 cut(s)	1192
HindII	GTYRAC	1 cut(s)	1192
HinfI	GANTC	8 cut(s)	224, 244, 533, 691, 1018, 1174, 1288, 1300
HpaI	GTTAAC	1 cut(s)	1192
HphI	GGTGA	4 cut(s)	94, 253, 628, 986
Hpy166II	GTNNAC	6 cut(s)	435, 532, 871, 1038, 1192, 1837
Hpy188I	TCNGA	8 cut(s)	487, 538, 590, 1017, 1168, 1179, 1293, 1591
Hpy188III	TCNNGA	5 cut(s)	361, 478, 746, 1456, 1702
Hpy8I	GTNNAC	6 cut(s)	435, 532, 871, 1038, 1192, 1837
Hpy99I	CGWCG	4 cut(s)	542, 545, 640, 889
HpyAV	CCTTC	3 cut(s)	283, 1239, 1340
HpyCH4III	ACNGT	2 cut(s)	997, 1382
HpyCH4IV	ACGT	3 cut(s)	54, 540, 609
HpyF10VI	GCNNNNNNNGC	8 cut(s)	129, 146, 812, 852, 861, 1438, 1682, 1721
HpyF3I	CTNAG	2 cut(s)	484, 1850
HpySE526I	ACGT	3 cut(s)	54, 540, 609
Hsp92I	GRCGYC	4 cut(s)	540, 635, 764, 815
HspAI	GCGC	5 cut(s)	283, 390, 815, 1074, 1152
KasI	GGCGCC	1 cut(s)	814
Ksp22I	TGATCA	3 cut(s)	3, 303, 1249
KspAI	GTTAAC	1 cut(s)	1192
KspI	CCGCGG	1 cut(s)	1860
LguI	GCTCTTC	3 cut(s)	317, 452, 1794
LmnI	GCTCC	6 cut(s)	122, 467, 963, 1123, 1330, 1736
Lsp1109I	GCAGC	7 cut(s)	205, 402, 1186, 1225, 1373, 1711, 1771
LweI	GCATC	3 cut(s)	132, 568, 1379
MaeI	CTAG	4 cut(s)	1041, 1461, 1622, 1924
MaeII	ACGT	3 cut(s)	54, 540, 609
MaeIII	GTNAC	2 cut(s)	603, 895
MbiI	CCGCTC	1 cut(s)	972
MfeI	CAATTG	1 cut(s)	1257
MflI	RGATCY	2 cut(s)	96, 1571
MhlI	GDGCHC	4 cut(s)	119, 824, 1839, 1923
MlsI	TGGCCA	1 cut(s)	59
MluCI	AATT	6 cut(s)	351, 679, 913, 1257, 1283, 1560
MluNI	TGGCCA	1 cut(s)	59
Mly113I	GGCGCC	1 cut(s)	815
MlyI	GAGTC	4 cut(s)	218, 527, 685, 1309
MmeI	TCCRAC	2 cut(s)	207, 561
Mox20I	TGGCCA	1 cut(s)	59
MroXI	GAANNNNTTC	2 cut(s)	98, 1287
MscI	TGGCCA	1 cut(s)	59
MseI	TTAA	2 cut(s)	552, 1191
MslI	CAYNNNNRTG	3 cut(s)	440, 1478, 1550
Msp20I	TGGCCA	1 cut(s)	59
MspA1I	CMGCKG	2 cut(s)	9, 1859
MspR9I	CCNGG	7 cut(s)	107, 497, 508, 851, 961, 991, 1305
MunI	CAATTG	1 cut(s)	1257
Mva1269I	GAATGC	1 cut(s)	1878
MvaI	CCWGG	3 cut(s)	851, 961, 1305
MvnI	CGCG	3 cut(s)	285, 561, 1859
MwoI	GCNNNNNNNGC	8 cut(s)	129, 146, 812, 852, 861, 1438, 1682, 1721
NarI	GGCGCC	1 cut(s)	815
NciI	CCSGG	4 cut(s)	107, 497, 508, 991
NcoI	CCATGG	1 cut(s)	198
NdeI	CATATG	1 cut(s)	1131
NlaIV	GGNNCC	8 cut(s)	153, 469, 511, 816, 958, 994, 1081, 1573
NmeAIII	GCCGAG	2 cut(s)	607, 843
NmuCI	GTSAC	1 cut(s)	895
NspI	RCATGY	3 cut(s)	1187, 1731, 1769
NspV	TTCGAA	2 cut(s)	704, 911
PaeI	GCATGC	1 cut(s)	1731
PaeR7I	CTCGAG	1 cut(s)	293
PagI	TCATGA	1 cut(s)	1455
PciSI	GCTCTTC	3 cut(s)	317, 452, 1794
PcsI	WCGNNNNNNNCGW	3 cut(s)	632, 644, 881
PctI	GAATGC	1 cut(s)	1878
PdmI	GAANNNNTTC	2 cut(s)	98, 1287
PfeI	GAWTC	4 cut(s)	244, 1018, 1174, 1288
PflFI	GACNNNGTC	1 cut(s)	997
PflMI	CCANNNNNTGG	1 cut(s)	1262
PfoI	TCCNGGA	1 cut(s)	495
PleI	GAGTC	4 cut(s)	218, 527, 685, 1308
PluTI	GGCGCC	1 cut(s)	818
PmaCI	CACGTG	1 cut(s)	610
PmlI	CACGTG	1 cut(s)	610
PpsI	GAGTC	4 cut(s)	218, 527, 685, 1308
Ppu21I	YACGTR	2 cut(s)	55, 610
PpuMI	RGGWCCY	1 cut(s)	28
PsiI	TTATAA	1 cut(s)	1565
Psp5II	RGGWCCY	1 cut(s)	28
Psp6I	CCWGG	3 cut(s)	849, 959, 1303
PspCI	CACGTG	1 cut(s)	610
PspFI	CCCAGC	1 cut(s)	1711
PspGI	CCWGG	3 cut(s)	849, 959, 1303
PspN4I	GGNNCC	8 cut(s)	153, 469, 511, 816, 958, 994, 1081, 1573
PspPI	GGNCC	9 cut(s)	28, 82, 109, 510, 877, 957, 993, 1049, 1709
PspPPI	RGGWCCY	1 cut(s)	28
PspXI	VCTCGAGB	1 cut(s)	293
PstI	CTGCAG	2 cut(s)	223, 420
PstNI	CAGNNNCTG	1 cut(s)	1386
PsuI	RGATCY	2 cut(s)	96, 1571
PsyI	GACNNNGTC	1 cut(s)	997
RsaI	GTAC	3 cut(s)	374, 434, 461
RsaNI	GTAC	3 cut(s)	373, 433, 460
RseI	CAYNNNNRTG	3 cut(s)	440, 1478, 1550
Rsr2I	CGGWCCG	2 cut(s)	82, 1049
RsrII	CGGWCCG	2 cut(s)	82, 1049
SacII	CCGCGG	1 cut(s)	1860
SapI	GCTCTTC	3 cut(s)	317, 452, 1794
SaqAI	TTAA	2 cut(s)	552, 1191
Sau96I	GGNCC	9 cut(s)	28, 82, 109, 510, 877, 957, 993, 1049, 1709
SchI	GAGTC	4 cut(s)	218, 527, 685, 1309
ScrFI	CCNGG	7 cut(s)	107, 497, 508, 851, 961, 991, 1305
SduI	GDGCHC	4 cut(s)	119, 824, 1839, 1923
SfaNI	GCATC	3 cut(s)	132, 568, 1379
SfcI	CTRYAG	2 cut(s)	219, 416
SfoI	GGCGCC	1 cut(s)	816
Sfr274I	CTCGAG	1 cut(s)	293
Sfr303I	CCGCGG	1 cut(s)	1860
SfuI	TTCGAA	2 cut(s)	704, 911
SgrBI	CCGCGG	1 cut(s)	1860
SinI	GGWCC	7 cut(s)	28, 82, 109, 510, 877, 993, 1049
SlaI	CTCGAG	1 cut(s)	293
SmiMI	CAYNNNNRTG	3 cut(s)	440, 1478, 1550
SmlI	CTYRAG	2 cut(s)	293, 1794
SmoI	CTYRAG	2 cut(s)	293, 1794
SpeI	ACTAGT	1 cut(s)	1040
SphI	GCATGC	1 cut(s)	1731
Sse9I	AATT	6 cut(s)	351, 679, 913, 1257, 1283, 1560
SspDI	GGCGCC	1 cut(s)	814
SspI	AATATT	1 cut(s)	1584
SspMI	CTAG	4 cut(s)	1041, 1461, 1622, 1924
StyD4I	CCNGG	7 cut(s)	105, 495, 506, 849, 959, 989, 1303
StyI	CCWWGG	3 cut(s)	198, 1233, 1525
TaaI	ACNGT	2 cut(s)	997, 1382
TaiI	ACGT	3 cut(s)	57, 543, 612
TaqI	TCGA	8 cut(s)	294, 456, 526, 638, 704, 887, 911, 1148
TaqII	GACCGA	4 cut(s)	70, 590, 865, 1066
TasI	AATT	6 cut(s)	351, 679, 913, 1257, 1283, 1560
TatI	WGTACW	1 cut(s)	459
TauI	GCSGC	6 cut(s)	49, 288, 632, 635, 1071, 1074
TfiI	GAWTC	4 cut(s)	244, 1018, 1174, 1288
Tru1I	TTAA	2 cut(s)	552, 1191
Tru9I	TTAA	2 cut(s)	552, 1191
TscAI	CASTG	2 cut(s)	119, 1116
TseFI	GTSAC	1 cut(s)	895
TseI	GCWGC	7 cut(s)	218, 415, 1199, 1238, 1386, 1724, 1784
Tsp45I	GTSAC	1 cut(s)	895
TspDTI	ATGAA	8 cut(s)	153, 163, 202, 439, 947, 1118, 1296, 1621
TspGWI	ACGGA	3 cut(s)	570, 721, 1428
TspRI	CASTG	2 cut(s)	119, 1116
Tth111I	GACNNNGTC	1 cut(s)	997
Van91I	CCANNNNNTGG	1 cut(s)	1262
VneI	GTGCAC	1 cut(s)	1835
VpaK11BI	GGWCC	7 cut(s)	28, 82, 109, 510, 877, 993, 1049
XapI	RAATTY	3 cut(s)	351, 679, 913
XceI	RCATGY	3 cut(s)	1187, 1731, 1769
XcmI	CCANNNNNNNNNTGG	1 cut(s)	857
XhoI	CTCGAG	1 cut(s)	293
XmiI	GTMKAC	1 cut(s)	1037
XmnI	GAANNNNTTC	2 cut(s)	98, 1287
XspI	CTAG	4 cut(s)	1041, 1461, 1622, 1924
ZraI	GACGTC	1 cut(s)	541

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.