Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0006848

Physical Location & Seq

Genomic Coordinates Forward (+)

13331671 .. 13334666

Gene Structure 2996 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00343700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGATCAGCGGAAAGGACATTTACGAGGTCCTTGCGAGCCTTGTGCCGCTTTACGTGGCCATGATCTTGGCCTATGGCTCGGTCCGGTGGTGGAAGATCTTCACCCCAGACCAGTGCTCCGGCATCAACCGATTCGTGGCGGTTTTTGCCGTTCCTTTGCTTTCCTTTCACTTTATTTCTTCCAATGATCCGTACGCCATGAACTACCGTTTCATAGCGGCGGACTCGTTGCAGAAAGTAGTGATTCTGGTGGCGCTATTCCTCTGGCAGATCTTCTCCAAGCGCGGCAACCTCGAGTGGATGATCTCGCTCTTCTCCCTCTCTACTCTCCCCAACACTCTCGTCATGGGCATTCCTCTGTTGAAGGCCATGTACGGCGACTTTTCGGCCACTCTCATGGTTCAAATCGTGGTGCTGCAGAGCGTCATCTGGTACACTCTCATGCTCTTCATGTTCGAGTACAGAGGAGCCAAACTCTTGATCTCAGAGCACTTCCCGGAAACCGCCGGGTCCATCACCTCGTTTCGGGTGGACTCAGACGTCGTTTCGCTTAACGGACTAGAGCCTTTGGAGACGGATGCGGAGATTGGAGAGGATGGGAAGTTACACGTGGTGGTGAGAAGATCGGCGGCGTCGTCGATGGTGTCGTCAATCAAGTCGCACGGGTTCAGCTCCTTGAATTCCGGCATGACTCCTCGAGCTTCGAACCTGACCGGCGTTGAGATTTATTCCGTTCAGTCGTCTCGTGAACCAACGCCGAGGGCATCCAGCTTCAACCAGACTGACTTCTACACCATGTTAAATGCCAGAGAGGCGCCGAGCCCTAAACACGGTTACACCAACAGCTTCAAGGGCGGGTTTGGCGATGTTTACTCGCTCCAGTCATTGAAAGGCGTAGCTCCGAGGACTTCAAATTTTGATGAGGATATGAAGAGAGGGGCAAGAAGCATGAGCGGTGAGCTGTTCAATGCCGGGACGGTGTCTTCGTACCCGCCTCCAAATCCCATGTTTTCGAGGTCTACCAGTGGCAGACCGGAGAAGAAGGAAAGCGGCTGCGCCAGTGCCGGTGCCGTTGTCGGTGGTGGTAGTGGTGGTGCAGTGTCTAATAAGGAGCTTCATATGTTTGTTTGGAGCTCGAGTGCTTCGTCGGTTTCCGAAGGGAGTCAGAAACATGCAATTAACCGAGCTGCCTCTACTGATTTTGGGGGCATTGATCCTTCTAGGGCTGCTCAACATGATCATCCAATTGCTGGTTCAAGAGGGGTGCATGAATTGATTCAGAATATGAGTTCTGGAAGGAAAATGAGTGGAGATGTGGAGCTTGAAATAGAAGAAGGAACAAAGTTTCCAGCAAGTGCGACCTCATATAGTAGTCGCCATAAGAAGATGGACATGGAAGACGGAGGTGTGACAAAGAAGCAACAGATGCCTCCTGCAAGTGTCATGACTAGGCTTATACTGATCATGGTGTGGAGAAAGCTCATTAGAAATCCCAACACCTACGCCAGTCTCCTTGGTCTCGCATGGTGGCACATCAAAATGCCCAAAATTGTAAGTGGATCCATATCAATATTATCTGATACTGGCTTAGGGATGGCTATGTTCAGTCTAGGTTTATTCATGGCTTTGCAACCAAAGATCATAGCTTGTGGAAAAGCAGTAGCAACATTCGGAATGGCTATTAGGTTCTTGATAGGCCCAGCAGTGATTGCTGCATGCTCCATAGCTGTTGGTCTTCGTGGAGTTCTTTTGCGTGTTGCAATACTTCAGGCTGCCCTTCCTCAAGGGATTGTTCCTTTTGTATTTGCCAAAGAATACAATGTTCACGCAGACATACTCAGCACTGCGGTCATTTTTGGAATGCTGCTTGCCTTGCCTGTAACAATAGTCTACTATATTCTTATCGGACTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0001666 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0006810 GO:0006950 GO:0008150 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009743 GO:0009746 GO:0009749 GO:0009914 GO:0009921 GO:0009925 GO:0009926 GO:0009958 GO:0009966 GO:0010033 GO:0010252 GO:0010315 GO:0010329 GO:0010646 GO:0010817 GO:0010928 GO:0012505 GO:0015562 GO:0016020 GO:0016323 GO:0022857 GO:0023051 GO:0032991 GO:0034284 GO:0036293 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0045178 GO:0048583 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0065007 GO:0065008 GO:0070482 GO:0071944 GO:0080161 GO:0098590 GO:0098796 GO:0098797 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mem_trans

Protein Analysis

637

Amino Acids

69.04

Weight (kDa)

9.21

Isoelectric Point (pI)

43.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mem_trans	PF03547	10 - 632	1.9e-113	Membrane transport protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0006848)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57090 AT5G57090
fragaria_vesca	FvH4_4g06870
malus_domestica	MD13G1239200.v1.1 MD16G1244500.v1.1
prunus_persica	Prupe.1G071700_v2.0.a1 Prupe.1G071800_v2.0.a1
pyrus_communis	pycom16g20590
rosa_chinensis	RchiOBHm_Chr4g0398751 RchiOBHm_Chr4g0398781
rosa_laevigata	RLG00000009323 RLG00000009324
rosa_multiflora	Rmu_sc0000458.1_g000007
rosa_roxburghii	Rroxscaffold_5G00343700 Rroxscaffold_5G00343710
rosa_rugosa	Rorug04G0011300 Rorug04G0011400
rosa_samantha	Rh4AG089200 Rh4AG089300 Rh4BG086600 Rh4CG097200 Rh4CG097400 Rh4DG080900 Rh4DG081100
rosa_wichuraiana	Rw4G007370 Rw4G007380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	539
AatII	GACGTC	1 cut(s)	543
AccB1I	GGYRCC	2 cut(s)	814, 1067
AccB7I	CCANNNNNTGG	1 cut(s)	1250
AccBSI	CCGCTC	1 cut(s)	954
AccI	GTMKAC	2 cut(s)	1019, 1890
AccII	CGCG	1 cut(s)	285
AclWI	GGATC	4 cut(s)	182, 1208, 1554, 1567
AcoI	YGGCCR	2 cut(s)	57, 387
AcsI	RAATTY	2 cut(s)	679, 913
AcuI	CTGAAG	1 cut(s)	1751
AcvI	CACGTG	1 cut(s)	610
AcyI	GRCGYC	3 cut(s)	540, 632, 815
AdeI	CACNNNGTG	1 cut(s)	613
AfaI	GTAC	5 cut(s)	194, 374, 434, 461, 989
AfiI	CCNNNNNNNGG	4 cut(s)	136, 525, 830, 1250
AflIII	ACRYGT	1 cut(s)	607
AjuI	GAANNNNNNNTTGG	2 cut(s)	1237, 1269
AloI	GAACNNNNNNTCC	2 cut(s)	1330, 1362
Alw21I	GWGCWC	3 cut(s)	119, 492, 1136
Alw26I	GTCTC	4 cut(s)	566, 747, 1514, 1523
AlwI	GGATC	4 cut(s)	182, 1208, 1554, 1567
Ama87I	CYCGRG	3 cut(s)	293, 696, 1135
AoxI	GGCC	5 cut(s)	57, 69, 366, 387, 1696
ApeKI	GCWGC	7 cut(s)	415, 1053, 1187, 1226, 1712, 1772, 1864
ApoI	RAATTY	2 cut(s)	679, 913
ArsI	GACNNNNNNTTYG	2 cut(s)	967, 999
Asp700I	GAANNNNTTC	2 cut(s)	98, 1275
AspLEI	GCGC	4 cut(s)	256, 285, 817, 1058
AspS9I	GGNCC	4 cut(s)	28, 82, 510, 1697
AsuC2I	CCSGG	3 cut(s)	497, 508, 973
AsuHPI	GGTGA	4 cut(s)	94, 508, 628, 968
AsuII	TTCGAA	1 cut(s)	704
AvaI	CYCGRG	3 cut(s)	293, 696, 1135
AvaII	GGWCC	3 cut(s)	28, 82, 510
BalI	TGGCCA	1 cut(s)	59
BamHI	GGATCC	1 cut(s)	1559
BanI	GGYRCC	2 cut(s)	814, 1067
BanII	GRGCYC	2 cut(s)	824, 1136
BarI	GAAGNNNNNNTAC	2 cut(s)	356, 388
BauI	CACGAG	1 cut(s)	744
BbrPI	CACGTG	1 cut(s)	610
BbsI	GAAGAC	3 cut(s)	975, 1404, 1727
Bbv12I	GWGCWC	3 cut(s)	119, 492, 1136
BbvI	GCAGC	7 cut(s)	402, 1040, 1174, 1213, 1699, 1759, 1851
BccI	CCATC	5 cut(s)	521, 590, 634, 1381, 1588
BceAI	ACGGC	3 cut(s)	134, 391, 1055
BcgI	CGANNNNNNTGC	4 cut(s)	14, 25, 48, 59
BclI	TGATCA	3 cut(s)	3, 1237, 1461
BcnI	CCSGG	3 cut(s)	497, 508, 973
BcoDI	GTCTC	4 cut(s)	566, 747, 1514, 1523
BfaI	CTAG	5 cut(s)	560, 1221, 1449, 1610, 1912
BfmI	CTRYAG	1 cut(s)	416
BfoI	RGCGCY	2 cut(s)	257, 818
BglI	GCCNNNNNGGC	1 cut(s)	812
BglII	AGATCT	2 cut(s)	96, 270
Bme1390I	CCNGG	3 cut(s)	497, 508, 973
Bme18I	GGWCC	3 cut(s)	28, 82, 510
BmeT110I	CYCGRG	3 cut(s)	293, 696, 1135
BmgT120I	GGNCC	4 cut(s)	28, 82, 510, 1697
BmiI	GGNNCC	5 cut(s)	469, 511, 816, 1069, 1561
BmrFI	CCNGG	3 cut(s)	497, 508, 973
BmsI	GCATC	4 cut(s)	132, 568, 773, 1416
BpiI	GAAGAC	3 cut(s)	975, 1404, 1727
BplI	GAGNNNNNCTC	2 cut(s)	459, 491
BpmI	CTGGAG	1 cut(s)	863
Bpu10I	CCTNAGC	1 cut(s)	1588
Bpu14I	TTCGAA	1 cut(s)	704
BpuEI	CTTGAG	1 cut(s)	1767
BpuMI	CCSGG	3 cut(s)	497, 508, 973
BsaAI	YACGTR	2 cut(s)	55, 610
BsaBI	GATNNNNATC	1 cut(s)	1564
BsaHI	GRCGYC	3 cut(s)	540, 632, 815
BsaI	GGTCTC	1 cut(s)	1523
BsaJI	CCNNGG	3 cut(s)	758, 902, 1513
BsaWI	WCCGGW	2 cut(s)	84, 1033
BsaXI	ACNNNNNCTCC	4 cut(s)	101, 131, 1123, 1153
Bsc4I	CCNNNNNNNGG	4 cut(s)	136, 525, 830, 1250
Bse118I	RCCGGY	2 cut(s)	713, 1064
Bse1I	ACTGG	6 cut(s)	112, 880, 1023, 1059, 1506, 1588
Bse8I	GATNNNNATC	1 cut(s)	1564
BseDI	CCNNGG	3 cut(s)	758, 902, 1513
BseGI	GGATG	6 cut(s)	306, 583, 601, 764, 1240, 1599
BseJI	GATNNNNATC	1 cut(s)	1564
BseLI	CCNNNNNNNGG	4 cut(s)	136, 525, 830, 1250
BseMII	CTCAG	3 cut(s)	498, 549, 1852
BseNI	ACTGG	6 cut(s)	112, 880, 1023, 1059, 1506, 1588
BseRI	GAGGAG	2 cut(s)	480, 684
BseXI	GCAGC	7 cut(s)	402, 1040, 1174, 1213, 1699, 1759, 1851
BseYI	CCCAGC	1 cut(s)	1699
BsgI	GTGCAG	1 cut(s)	1116
Bsh1236I	CGCG	1 cut(s)	285
BshFI	GGCC	5 cut(s)	59, 71, 368, 389, 1698
BshNI	GGYRCC	2 cut(s)	814, 1067
BsiHKAI	GWGCWC	3 cut(s)	119, 492, 1136
BsiHKCI	CYCGRG	3 cut(s)	293, 696, 1135
BsiSI	CCGG	9 cut(s)	85, 120, 497, 507, 684, 714, 972, 1034, 1065
BsiWI	CGTACG	1 cut(s)	192
BslFI	GGGAC	1 cut(s)	988
BslI	CCNNNNNNNGG	4 cut(s)	136, 525, 830, 1250
BsmAI	GTCTC	4 cut(s)	566, 747, 1514, 1523
BsmBI	CGTCTC	2 cut(s)	566, 747
BsmFI	GGGAC	1 cut(s)	988
BsmI	GAATGC	2 cut(s)	351, 1866
BsnI	GGCC	5 cut(s)	59, 71, 368, 389, 1698
Bso31I	GGTCTC	1 cut(s)	1523
BsoBI	CYCGRG	3 cut(s)	293, 696, 1135
Bsp119I	TTCGAA	1 cut(s)	704
Bsp1286I	GDGCHC	4 cut(s)	119, 492, 824, 1136
BspANI	GGCC	5 cut(s)	59, 71, 368, 389, 1698
BspCNI	CTCAG	3 cut(s)	497, 548, 1851
BspFNI	CGCG	1 cut(s)	285
BspHI	TCATGA	1 cut(s)	1443
BspLI	GGNNCC	5 cut(s)	469, 511, 816, 1069, 1561
BspMAI	CTGCAG	1 cut(s)	420
BspPI	GGATC	4 cut(s)	182, 1208, 1554, 1567
BspQI	GCTCTTC	2 cut(s)	317, 452
BspT104I	TTCGAA	1 cut(s)	704
BspT107I	GGYRCC	2 cut(s)	814, 1067
BspTNI	GGTCTC	1 cut(s)	1523
BsrBI	CCGCTC	1 cut(s)	954
BsrFI	RCCGGY	2 cut(s)	713, 1064
BsrI	ACTGG	6 cut(s)	112, 880, 1023, 1059, 1506, 1588
BssAI	RCCGGY	2 cut(s)	713, 1064
BssECI	CCNNGG	3 cut(s)	758, 902, 1513
BssNI	GRCGYC	3 cut(s)	540, 632, 815
BssSI	CACGAG	1 cut(s)	744
BssT1I	CCWWGG	1 cut(s)	1513
Bst2BI	CACGAG	1 cut(s)	744
Bst4CI	ACNGT	3 cut(s)	209, 833, 979
Bst6I	CTCTTC	3 cut(s)	317, 452, 926
BstACI	GRCGYC	3 cut(s)	540, 632, 815
BstAPI	GCANNNNNTGC	2 cut(s)	1426, 1709
BstBAI	YACGTR	2 cut(s)	55, 610
BstBI	TTCGAA	1 cut(s)	704
BstC8I	GCNNGC	3 cut(s)	37, 1717, 1869
BstDEI	CTNAG	4 cut(s)	484, 535, 1588, 1838
BstF5I	GGATG	6 cut(s)	306, 583, 601, 764, 1240, 1599
BstFNI	CGCG	1 cut(s)	285
BstH2I	RGCGCY	2 cut(s)	257, 818
BstHHI	GCGC	4 cut(s)	256, 285, 817, 1058
BstMAI	GTCTC	4 cut(s)	566, 747, 1514, 1523
BstMWI	GCNNNNNNNGC	7 cut(s)	146, 812, 852, 861, 1426, 1709, 1873
BstNSI	RCATGY	2 cut(s)	1175, 1719
BstSCI	CCNGG	3 cut(s)	495, 506, 971
BstSFI	CTRYAG	1 cut(s)	416
BstUI	CGCG	1 cut(s)	285
BstV1I	GCAGC	7 cut(s)	402, 1040, 1174, 1213, 1699, 1759, 1851
BstV2I	GAAGAC	3 cut(s)	975, 1404, 1727
BstX2I	RGATCY	3 cut(s)	96, 270, 1559
BstXI	CCANNNNNNTGG	2 cut(s)	67, 397
BstYI	RGATCY	3 cut(s)	96, 270, 1559
BsuRI	GGCC	5 cut(s)	59, 71, 368, 389, 1698
BtgZI	GCGATG	1 cut(s)	879
BtsCI	GGATG	6 cut(s)	306, 583, 601, 764, 1240, 1599
BtsI	GCAGTG	3 cut(s)	1104, 1710, 1842
BtsIMutI	CAGTG	6 cut(s)	119, 1030, 1066, 1104, 1710, 1842
Cac8I	GCNNGC	3 cut(s)	37, 1717, 1869
CciI	TCATGA	1 cut(s)	1443
CfoI	GCGC	4 cut(s)	256, 285, 817, 1058
Cfr10I	RCCGGY	2 cut(s)	713, 1064
Cfr13I	GGNCC	4 cut(s)	28, 82, 510, 1697
CpoI	CGGWCCG	1 cut(s)	82
CseI	GACGC	2 cut(s)	412, 621
Csp6I	GTAC	5 cut(s)	193, 373, 433, 460, 988
CspI	CGGWCCG	1 cut(s)	82
CviQI	GTAC	5 cut(s)	193, 373, 433, 460, 988
DdeI	CTNAG	4 cut(s)	484, 535, 1588, 1838
DinI	GGCGCC	1 cut(s)	816
DraIII	CACNNNGTG	1 cut(s)	613
DrdI	GACNNNNNNGTC	1 cut(s)	539
DseDI	GACNNNNNNGTC	1 cut(s)	539
EaeI	YGGCCR	2 cut(s)	57, 387
Eam1104I	CTCTTC	3 cut(s)	317, 452, 926
EarI	CTCTTC	3 cut(s)	317, 452, 926
EciI	GGCGGA	1 cut(s)	236
Ecl136II	GAGCTC	1 cut(s)	1134
Eco130I	CCWWGG	1 cut(s)	1513
Eco24I	GRGCYC	2 cut(s)	824, 1136
Eco31I	GGTCTC	1 cut(s)	1523
Eco47I	GGWCC	3 cut(s)	28, 82, 510
Eco53kI	GAGCTC	1 cut(s)	1134
Eco57I	CTGAAG	1 cut(s)	1751
Eco72I	CACGTG	1 cut(s)	610
Eco88I	CYCGRG	3 cut(s)	293, 696, 1135
EcoICRI	GAGCTC	1 cut(s)	1134
EcoO109I	RGGNCCY	1 cut(s)	28
EcoRI	GAATTC	1 cut(s)	679
EcoT14I	CCWWGG	1 cut(s)	1513
EcoT38I	GRGCYC	2 cut(s)	824, 1136
EgeI	GGCGCC	1 cut(s)	816
EheI	GGCGCC	1 cut(s)	816
ErhI	CCWWGG	1 cut(s)	1513
Esp3I	CGTCTC	2 cut(s)	566, 747
FaqI	GGGAC	1 cut(s)	988
FauI	CCCGC	2 cut(s)	848, 999
FauNDI	CATATG	1 cut(s)	1119
FbaI	TGATCA	3 cut(s)	3, 1237, 1461
FblI	GTMKAC	2 cut(s)	1019, 1890
FokI	GGATG	6 cut(s)	313, 590, 608, 751, 1227, 1606
FriOI	GRGCYC	2 cut(s)	824, 1136
FspBI	CTAG	5 cut(s)	560, 1221, 1449, 1610, 1912
GlaI	GCGC	4 cut(s)	255, 284, 816, 1057
GsaI	CCCAGC	1 cut(s)	1703
GsuI	CTGGAG	1 cut(s)	863
HaeII	RGCGCY	2 cut(s)	257, 818
HaeIII	GGCC	5 cut(s)	59, 71, 368, 389, 1698
HapII	CCGG	9 cut(s)	85, 120, 497, 507, 684, 714, 972, 1034, 1065
HgaI	GACGC	2 cut(s)	412, 621
HhaI	GCGC	4 cut(s)	256, 285, 817, 1058
Hin1I	GRCGYC	3 cut(s)	540, 632, 815
Hin6I	GCGC	4 cut(s)	254, 283, 815, 1056
HinP1I	GCGC	4 cut(s)	254, 283, 815, 1056
HinfI	GANTC	8 cut(s)	132, 224, 244, 533, 691, 1162, 1276, 1908
HpaII	CCGG	9 cut(s)	85, 120, 497, 507, 684, 714, 972, 1034, 1065
HphI	GGTGA	4 cut(s)	94, 508, 628, 968
Hpy166II	GTNNAC	7 cut(s)	435, 532, 749, 871, 1020, 1825, 1891
Hpy188I	TCNGA	9 cut(s)	487, 538, 903, 1156, 1167, 1281, 1579, 1673, 1907
Hpy188III	TCNNGA	6 cut(s)	478, 746, 1257, 1293, 1444, 1690
Hpy8I	GTNNAC	7 cut(s)	435, 532, 749, 871, 1020, 1825, 1891
Hpy99I	CGWCG	4 cut(s)	545, 637, 640, 1150
HpyAV	CCTTC	7 cut(s)	358, 1036, 1151, 1227, 1290, 1328, 1787
HpyCH4III	ACNGT	3 cut(s)	209, 833, 979
HpyCH4IV	ACGT	3 cut(s)	54, 540, 609
HpyCH4V	TGCA	9 cut(s)	232, 418, 1097, 1175, 1267, 1436, 1630, 1715, 1760
HpyF10VI	GCNNNNNNNGC	7 cut(s)	146, 812, 852, 861, 1426, 1709, 1873
HpyF3I	CTNAG	4 cut(s)	484, 535, 1588, 1838
HpySE526I	ACGT	3 cut(s)	54, 540, 609
Hsp92I	GRCGYC	3 cut(s)	540, 632, 815
HspAI	GCGC	4 cut(s)	254, 283, 815, 1056
KasI	GGCGCC	1 cut(s)	814
Ksp22I	TGATCA	3 cut(s)	3, 1237, 1461
LguI	GCTCTTC	2 cut(s)	317, 452
LmnI	GCTCC	9 cut(s)	122, 467, 677, 882, 904, 1111, 1131, 1318, 1724
Lsp1109I	GCAGC	7 cut(s)	402, 1040, 1174, 1213, 1699, 1759, 1851
LweI	GCATC	4 cut(s)	132, 568, 773, 1416
MaeI	CTAG	5 cut(s)	560, 1221, 1449, 1610, 1912
MaeII	ACGT	3 cut(s)	54, 540, 609
MaeIII	GTNAC	4 cut(s)	603, 833, 1408, 1879
MbiI	CCGCTC	1 cut(s)	954
MfeI	CAATTG	1 cut(s)	1245
MflI	RGATCY	3 cut(s)	96, 270, 1559
MhlI	GDGCHC	4 cut(s)	119, 492, 824, 1136
MlsI	TGGCCA	1 cut(s)	59
MluCI	AATT	6 cut(s)	679, 913, 1176, 1245, 1271, 1548
MluNI	TGGCCA	1 cut(s)	59
Mly113I	GGCGCC	1 cut(s)	815
MlyI	GAGTC	5 cut(s)	218, 527, 685, 1171, 1902
Mox20I	TGGCCA	1 cut(s)	59
MroXI	GAANNNNTTC	2 cut(s)	98, 1275
MscI	TGGCCA	1 cut(s)	59
MseI	TTAA	3 cut(s)	552, 800, 1179
MslI	CAYNNNNRTG	3 cut(s)	395, 440, 1538
Msp20I	TGGCCA	1 cut(s)	59
MspA1I	CMGCKG	1 cut(s)	9
MspI	CCGG	9 cut(s)	85, 120, 497, 507, 684, 714, 972, 1034, 1065
MspR9I	CCNGG	3 cut(s)	497, 508, 973
MunI	CAATTG	1 cut(s)	1245
Mva1269I	GAATGC	2 cut(s)	351, 1866
MvnI	CGCG	1 cut(s)	285
MwoI	GCNNNNNNNGC	7 cut(s)	146, 812, 852, 861, 1426, 1709, 1873
NarI	GGCGCC	1 cut(s)	815
NciI	CCSGG	3 cut(s)	497, 508, 973
NdeI	CATATG	1 cut(s)	1119
NlaIV	GGNNCC	5 cut(s)	469, 511, 816, 1069, 1561
NmeAIII	GCCGAG	2 cut(s)	783, 843
NmuCI	GTSAC	1 cut(s)	1408
NspI	RCATGY	2 cut(s)	1175, 1719
NspV	TTCGAA	1 cut(s)	704
PaeI	GCATGC	1 cut(s)	1719
PaeR7I	CTCGAG	3 cut(s)	293, 696, 1135
PagI	TCATGA	1 cut(s)	1443
PciSI	GCTCTTC	2 cut(s)	317, 452
PcsI	WCGNNNNNNNCGW	4 cut(s)	632, 644, 983, 1142
PctI	GAATGC	2 cut(s)	351, 1866
PdmI	GAANNNNTTC	2 cut(s)	98, 1275
PfeI	GAWTC	3 cut(s)	132, 244, 1276
Pfl23II	CGTACG	1 cut(s)	192
PflFI	GACNNNGTC	1 cut(s)	979
PflMI	CCANNNNNTGG	1 cut(s)	1250
PfoI	TCCNGGA	1 cut(s)	495
PleI	GAGTC	5 cut(s)	218, 527, 685, 1170, 1902
PluTI	GGCGCC	1 cut(s)	818
PmaCI	CACGTG	1 cut(s)	610
PmlI	CACGTG	1 cut(s)	610
PpsI	GAGTC	5 cut(s)	218, 527, 685, 1170, 1902
Ppu21I	YACGTR	2 cut(s)	55, 610
PpuMI	RGGWCCY	1 cut(s)	28
Psp124BI	GAGCTC	1 cut(s)	1136
Psp5II	RGGWCCY	1 cut(s)	28
PspCI	CACGTG	1 cut(s)	610
PspFI	CCCAGC	1 cut(s)	1699
PspLI	CGTACG	1 cut(s)	192
PspN4I	GGNNCC	5 cut(s)	469, 511, 816, 1069, 1561
PspPI	GGNCC	4 cut(s)	28, 82, 510, 1697
PspPPI	RGGWCCY	1 cut(s)	28
PspXI	VCTCGAGB	3 cut(s)	293, 696, 1135
PstI	CTGCAG	1 cut(s)	420
PsuI	RGATCY	3 cut(s)	96, 270, 1559
PsyI	GACNNNGTC	1 cut(s)	979
RsaI	GTAC	5 cut(s)	194, 374, 434, 461, 989
RsaNI	GTAC	5 cut(s)	193, 373, 433, 460, 988
RseI	CAYNNNNRTG	3 cut(s)	395, 440, 1538
Rsr2I	CGGWCCG	1 cut(s)	82
RsrII	CGGWCCG	1 cut(s)	82
SacI	GAGCTC	1 cut(s)	1136
SapI	GCTCTTC	2 cut(s)	317, 452
SaqAI	TTAA	3 cut(s)	552, 800, 1179
Sau96I	GGNCC	4 cut(s)	28, 82, 510, 1697
SchI	GAGTC	5 cut(s)	218, 527, 685, 1171, 1902
ScrFI	CCNGG	3 cut(s)	497, 508, 973
SduI	GDGCHC	4 cut(s)	119, 492, 824, 1136
SfaNI	GCATC	4 cut(s)	132, 568, 773, 1416
SfcI	CTRYAG	1 cut(s)	416
SfoI	GGCGCC	1 cut(s)	816
Sfr274I	CTCGAG	3 cut(s)	293, 696, 1135
SfuI	TTCGAA	1 cut(s)	704
SinI	GGWCC	3 cut(s)	28, 82, 510
SlaI	CTCGAG	3 cut(s)	293, 696, 1135
SmiMI	CAYNNNNRTG	3 cut(s)	395, 440, 1538
SmlI	CTYRAG	4 cut(s)	293, 696, 1135, 1782
SmoI	CTYRAG	4 cut(s)	293, 696, 1135, 1782
SphI	GCATGC	1 cut(s)	1719
Sse9I	AATT	6 cut(s)	679, 913, 1176, 1245, 1271, 1548
SspDI	GGCGCC	1 cut(s)	814
SspI	AATATT	1 cut(s)	1572
SspMI	CTAG	5 cut(s)	560, 1221, 1449, 1610, 1912
SstI	GAGCTC	1 cut(s)	1136
StyD4I	CCNGG	3 cut(s)	495, 506, 971
StyI	CCWWGG	1 cut(s)	1513
TaaI	ACNGT	3 cut(s)	209, 833, 979
TaiI	ACGT	3 cut(s)	57, 543, 612
TaqI	TCGA	7 cut(s)	294, 456, 638, 697, 704, 1013, 1136
TaqII	GACCGA	1 cut(s)	70
TasI	AATT	6 cut(s)	679, 913, 1176, 1245, 1271, 1548
TatI	WGTACW	1 cut(s)	459
TauI	GCSGC	5 cut(s)	49, 221, 288, 632, 1053
TfiI	GAWTC	3 cut(s)	132, 244, 1276
Tru1I	TTAA	3 cut(s)	552, 800, 1179
Tru9I	TTAA	3 cut(s)	552, 800, 1179
TscAI	CASTG	6 cut(s)	119, 1030, 1066, 1104, 1710, 1849
TseFI	GTSAC	1 cut(s)	1408
TseI	GCWGC	7 cut(s)	415, 1053, 1187, 1226, 1712, 1772, 1864
Tsp45I	GTSAC	1 cut(s)	1408
TspDTI	ATGAA	7 cut(s)	202, 215, 439, 944, 1106, 1284, 1609
TspGWI	ACGGA	5 cut(s)	180, 570, 590, 721, 1416
TspRI	CASTG	6 cut(s)	119, 1030, 1066, 1104, 1710, 1849
Tth111I	GACNNNGTC	1 cut(s)	979
Van91I	CCANNNNNTGG	1 cut(s)	1250
VpaK11BI	GGWCC	3 cut(s)	28, 82, 510
XapI	RAATTY	2 cut(s)	679, 913
XceI	RCATGY	2 cut(s)	1175, 1719
XhoI	CTCGAG	3 cut(s)	293, 696, 1135
XmiI	GTMKAC	2 cut(s)	1019, 1890
XmnI	GAANNNNTTC	2 cut(s)	98, 1275
XspI	CTAG	5 cut(s)	560, 1221, 1449, 1610, 1912
ZraI	GACGTC	1 cut(s)	541

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.