Paired amphipathic helix protein Sin3-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g13800 |
| malus_domestica | MD04G1010500.v1.1 |
| prunus_persica | Prupe.1G010200_v2.0.a1 |
| pyrus_communis | pycom04g00860 |
| rosa_chinensis | RchiOBHm_Chr4g0414721 |
| rosa_laevigata | RLG00000008100 RLG00000008121 |
| rosa_multiflora | Rmu_sc0001192.1_g000028 Rmu_sc0003611.1_g000015 Rmu_sc0008157.1_g000009 Rmu_sc0010606.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00358530 Rroxscaffold_5G00358820 |
| rosa_rugosa | Rorug04G0130200 Rorug04G0130200 Rorug04G0132000 |
| rosa_samantha | Rh4AG188500 Rh4AG191300 Rh4BG187500 Rh4BG189400 Rh4CG200800 Rh4CG202200 Rh4DG187100 Rh4DG189800 |
| rosa_wichuraiana | Rw4G016080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 287, 445 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 125 |
| AflIII | ACRYGT | 1 cut(s) | 306 |
| AgsI | TTSAA | 4 cut(s) | 208, 295, 346, 368 |
| AleI | CACNNNNGTG | 1 cut(s) | 309 |
| Alw21I | GWGCWC | 3 cut(s) | 165, 218, 414 |
| Alw26I | GTCTC | 1 cut(s) | 444 |
| Ama87I | CYCGRG | 1 cut(s) | 263 |
| AoxI | GGCC | 2 cut(s) | 36, 102 |
| ApoI | RAATTY | 2 cut(s) | 287, 445 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 325, 357 |
| AvaI | CYCGRG | 1 cut(s) | 263 |
| Bbv12I | GWGCWC | 3 cut(s) | 165, 218, 414 |
| BcoDI | GTCTC | 1 cut(s) | 444 |
| BfaI | CTAG | 2 cut(s) | 315, 455 |
| BmeT110I | CYCGRG | 1 cut(s) | 263 |
| BmsI | GCATC | 2 cut(s) | 319, 418 |
| BpmI | CTGGAG | 1 cut(s) | 179 |
| BsaAI | YACGTR | 1 cut(s) | 219 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 125 |
| BseGI | GGATG | 1 cut(s) | 361 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BseMII | CTCAG | 1 cut(s) | 264 |
| BshFI | GGCC | 2 cut(s) | 38, 104 |
| BsiHKAI | GWGCWC | 3 cut(s) | 165, 218, 414 |
| BsiHKCI | CYCGRG | 1 cut(s) | 263 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 125 |
| BsmAI | GTCTC | 1 cut(s) | 444 |
| BsmI | GAATGC | 1 cut(s) | 274 |
| BsnI | GGCC | 2 cut(s) | 38, 104 |
| BsoBI | CYCGRG | 1 cut(s) | 263 |
| Bsp1286I | GDGCHC | 3 cut(s) | 165, 218, 414 |
| Bsp143I | GATC | 1 cut(s) | 373 |
| BspANI | GGCC | 2 cut(s) | 38, 104 |
| BspCNI | CTCAG | 1 cut(s) | 265 |
| BspQI | GCTCTTC | 1 cut(s) | 206 |
| BssMI | GATC | 1 cut(s) | 373 |
| Bst4CI | ACNGT | 1 cut(s) | 468 |
| Bst6I | CTCTTC | 1 cut(s) | 206 |
| BstBAI | YACGTR | 1 cut(s) | 219 |
| BstC8I | GCNNGC | 2 cut(s) | 40, 106 |
| BstDEI | CTNAG | 1 cut(s) | 273 |
| BstF5I | GGATG | 1 cut(s) | 361 |
| BstKTI | GATC | 1 cut(s) | 376 |
| BstMAI | GTCTC | 1 cut(s) | 444 |
| BstMBI | GATC | 1 cut(s) | 373 |
| BstNSI | RCATGY | 1 cut(s) | 310 |
| BsuRI | GGCC | 2 cut(s) | 38, 104 |
| BtsCI | GGATG | 1 cut(s) | 361 |
| Cac8I | GCNNGC | 2 cut(s) | 40, 106 |
| CviAII | CATG | 2 cut(s) | 307, 389 |
| CviJI | RGCY | 2 cut(s) | 38, 104 |
| CviKI_1 | RGCY | 2 cut(s) | 38, 104 |
| DdeI | CTNAG | 1 cut(s) | 273 |
| DpnI | GATC | 1 cut(s) | 375 |
| DpnII | GATC | 1 cut(s) | 373 |
| Eam1104I | CTCTTC | 1 cut(s) | 206 |
| EarI | CTCTTC | 1 cut(s) | 206 |
| Eco32I | GATATC | 1 cut(s) | 184 |
| Eco88I | CYCGRG | 1 cut(s) | 263 |
| EcoRI | GAATTC | 1 cut(s) | 287 |
| EcoRV | GATATC | 1 cut(s) | 184 |
| EcoT22I | ATGCAT | 1 cut(s) | 390 |
| FaeI | CATG | 2 cut(s) | 310, 392 |
| FaiI | YATR | 8 cut(s) | 44, 147, 222, 282, 308, 386, 390, 417 |
| FatI | CATG | 2 cut(s) | 306, 388 |
| FokI | GGATG | 1 cut(s) | 368 |
| FspBI | CTAG | 2 cut(s) | 315, 455 |
| GsuI | CTGGAG | 1 cut(s) | 179 |
| HaeIII | GGCC | 2 cut(s) | 38, 104 |
| Hin1II | CATG | 2 cut(s) | 310, 392 |
| HinfI | GANTC | 3 cut(s) | 49, 115, 359 |
| Hpy188I | TCNGA | 2 cut(s) | 120, 444 |
| Hpy188III | TCNNGA | 5 cut(s) | 158, 175, 197, 265, 292 |
| Hpy99I | CGWCG | 1 cut(s) | 176 |
| HpyCH4III | ACNGT | 1 cut(s) | 468 |
| HpyCH4IV | ACGT | 1 cut(s) | 218 |
| HpyCH4V | TGCA | 6 cut(s) | 20, 42, 108, 243, 388, 431 |
| HpyF3I | CTNAG | 1 cut(s) | 273 |
| HpySE526I | ACGT | 1 cut(s) | 218 |
| Hsp92II | CATG | 2 cut(s) | 310, 392 |
| Kzo9I | GATC | 1 cut(s) | 373 |
| LguI | GCTCTTC | 1 cut(s) | 206 |
| LmnI | GCTCC | 2 cut(s) | 160, 409 |
| LpnPI | CCDG | 4 cut(s) | 52, 118, 143, 182 |
| LweI | GCATC | 2 cut(s) | 319, 418 |
| MaeI | CTAG | 2 cut(s) | 315, 455 |
| MaeII | ACGT | 1 cut(s) | 218 |
| MalI | GATC | 1 cut(s) | 375 |
| MboI | GATC | 1 cut(s) | 373 |
| MboII | GAAGA | 3 cut(s) | 91, 220, 223 |
| MhlI | GDGCHC | 3 cut(s) | 165, 218, 414 |
| MluCI | AATT | 5 cut(s) | 203, 287, 299, 363, 445 |
| MlyI | GAGTC | 1 cut(s) | 353 |
| MnlI | CCTC | 1 cut(s) | 64 |
| Mph1103I | ATGCAT | 1 cut(s) | 390 |
| MslI | CAYNNNNRTG | 1 cut(s) | 309 |
| Mva1269I | GAATGC | 1 cut(s) | 274 |
| NdeII | GATC | 1 cut(s) | 373 |
| NlaIII | CATG | 2 cut(s) | 310, 392 |
| NsiI | ATGCAT | 1 cut(s) | 390 |
| NspI | RCATGY | 1 cut(s) | 310 |
| OliI | CACNNNNGTG | 1 cut(s) | 309 |
| PciI | ACATGT | 1 cut(s) | 306 |
| PciSI | GCTCTTC | 1 cut(s) | 206 |
| PctI | GAATGC | 1 cut(s) | 274 |
| PfeI | GAWTC | 2 cut(s) | 49, 115 |
| PleI | GAGTC | 1 cut(s) | 353 |
| PpsI | GAGTC | 1 cut(s) | 353 |
| Ppu21I | YACGTR | 1 cut(s) | 219 |
| PscI | ACATGT | 1 cut(s) | 306 |
| RseI | CAYNNNNRTG | 1 cut(s) | 309 |
| SapI | GCTCTTC | 1 cut(s) | 206 |
| Sau3AI | GATC | 1 cut(s) | 373 |
| SchI | GAGTC | 1 cut(s) | 353 |
| SduI | GDGCHC | 3 cut(s) | 165, 218, 414 |
| SetI | ASST | 5 cut(s) | 9, 75, 130, 221, 426 |
| SfaNI | GCATC | 2 cut(s) | 319, 418 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 309 |
| Sse9I | AATT | 5 cut(s) | 203, 287, 299, 363, 445 |
| SspMI | CTAG | 2 cut(s) | 315, 455 |
| TaaI | ACNGT | 1 cut(s) | 468 |
| TaiI | ACGT | 1 cut(s) | 221 |
| TaqI | TCGA | 1 cut(s) | 69 |
| TasI | AATT | 5 cut(s) | 203, 287, 299, 363, 445 |
| TfiI | GAWTC | 2 cut(s) | 49, 115 |
| TspDTI | ATGAA | 1 cut(s) | 237 |
| XapI | RAATTY | 2 cut(s) | 287, 445 |
| XceI | RCATGY | 1 cut(s) | 310 |
| XspI | CTAG | 2 cut(s) | 315, 455 |
| Zsp2I | ATGCAT | 1 cut(s) | 390 |