Paired amphipathic helix protein Sin3-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g13800 |
| malus_domestica | MD04G1010500.v1.1 |
| prunus_persica | Prupe.1G010200_v2.0.a1 |
| pyrus_communis | pycom04g00860 |
| rosa_chinensis | RchiOBHm_Chr4g0414721 |
| rosa_laevigata | RLG00000008100 RLG00000008121 |
| rosa_multiflora | Rmu_sc0001192.1_g000028 Rmu_sc0003611.1_g000015 Rmu_sc0008157.1_g000009 Rmu_sc0010606.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00358530 Rroxscaffold_5G00358820 |
| rosa_rugosa | Rorug04G0130200 Rorug04G0130200 Rorug04G0132000 |
| rosa_samantha | Rh4AG188500 Rh4AG191300 Rh4BG187500 Rh4BG189400 Rh4CG200800 Rh4CG202200 Rh4DG187100 Rh4DG189800 |
| rosa_wichuraiana | Rw4G016080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 34 |
| AcsI | RAATTY | 3 cut(s) | 43, 86, 191 |
| AflIII | ACRYGT | 1 cut(s) | 210 |
| AgsI | TTSAA | 3 cut(s) | 91, 158, 191 |
| Alw26I | GTCTC | 2 cut(s) | 15, 290 |
| ApoI | RAATTY | 3 cut(s) | 43, 86, 191 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 86 |
| BclI | TGATCA | 1 cut(s) | 123 |
| BcoDI | GTCTC | 2 cut(s) | 15, 290 |
| BfaI | CTAG | 1 cut(s) | 230 |
| BglII | AGATCT | 1 cut(s) | 350 |
| BpuEI | CTTGAG | 1 cut(s) | 367 |
| BsaBI | GATNNNNATC | 1 cut(s) | 183 |
| Bse1I | ACTGG | 1 cut(s) | 366 |
| Bse8I | GATNNNNATC | 1 cut(s) | 183 |
| BseGI | GGATG | 1 cut(s) | 30 |
| BseJI | GATNNNNATC | 1 cut(s) | 183 |
| BseMII | CTCAG | 1 cut(s) | 231 |
| BseNI | ACTGG | 1 cut(s) | 366 |
| BsgI | GTGCAG | 1 cut(s) | 119 |
| BsmAI | GTCTC | 2 cut(s) | 15, 290 |
| BsmBI | CGTCTC | 1 cut(s) | 290 |
| Bsp143I | GATC | 2 cut(s) | 123, 350 |
| BspACI | CCGC | 1 cut(s) | 34 |
| BspCNI | CTCAG | 1 cut(s) | 232 |
| BsrI | ACTGG | 1 cut(s) | 366 |
| BssMI | GATC | 2 cut(s) | 123, 350 |
| BstDEI | CTNAG | 2 cut(s) | 240, 253 |
| BstF5I | GGATG | 1 cut(s) | 30 |
| BstKTI | GATC | 2 cut(s) | 126, 353 |
| BstMAI | GTCTC | 2 cut(s) | 15, 290 |
| BstMBI | GATC | 2 cut(s) | 123, 350 |
| BstNSI | RCATGY | 1 cut(s) | 214 |
| BstX2I | RGATCY | 1 cut(s) | 350 |
| BstYI | RGATCY | 1 cut(s) | 350 |
| BtsCI | GGATG | 1 cut(s) | 30 |
| CviAII | CATG | 2 cut(s) | 211, 289 |
| CviJI | RGCY | 1 cut(s) | 67 |
| CviKI_1 | RGCY | 1 cut(s) | 67 |
| DdeI | CTNAG | 2 cut(s) | 240, 253 |
| DpnI | GATC | 2 cut(s) | 125, 352 |
| DpnII | GATC | 2 cut(s) | 123, 350 |
| EcoRI | GAATTC | 1 cut(s) | 86 |
| Esp3I | CGTCTC | 1 cut(s) | 290 |
| FaeI | CATG | 2 cut(s) | 214, 292 |
| FaiI | YATR | 5 cut(s) | 38, 212, 216, 290, 358 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 150, 182 |
| FatI | CATG | 2 cut(s) | 210, 288 |
| FbaI | TGATCA | 1 cut(s) | 123 |
| FokI | GGATG | 1 cut(s) | 17 |
| FspBI | CTAG | 1 cut(s) | 230 |
| Hin1II | CATG | 2 cut(s) | 214, 292 |
| HinfI | GANTC | 3 cut(s) | 173, 297, 326 |
| Hpy188I | TCNGA | 3 cut(s) | 20, 49, 178 |
| Hpy188III | TCNNGA | 5 cut(s) | 111, 158, 188, 230, 272 |
| HpyAV | CCTTC | 1 cut(s) | 37 |
| HpyCH4IV | ACGT | 1 cut(s) | 283 |
| HpyCH4V | TGCA | 2 cut(s) | 100, 360 |
| HpyF3I | CTNAG | 2 cut(s) | 240, 253 |
| HpySE526I | ACGT | 1 cut(s) | 283 |
| Hsp92II | CATG | 2 cut(s) | 214, 292 |
| Ksp22I | TGATCA | 1 cut(s) | 123 |
| Kzo9I | GATC | 2 cut(s) | 123, 350 |
| LpnPI | CCDG | 5 cut(s) | 82, 86, 124, 315, 354 |
| MaeI | CTAG | 1 cut(s) | 230 |
| MaeII | ACGT | 1 cut(s) | 283 |
| MalI | GATC | 2 cut(s) | 125, 352 |
| MboI | GATC | 2 cut(s) | 123, 350 |
| MboII | GAAGA | 2 cut(s) | 62, 73 |
| MflI | RGATCY | 1 cut(s) | 350 |
| MluCI | AATT | 4 cut(s) | 43, 72, 86, 191 |
| MnlI | CCTC | 2 cut(s) | 125, 316 |
| MroXI | GAANNNNTTC | 1 cut(s) | 86 |
| MseI | TTAA | 1 cut(s) | 168 |
| NdeII | GATC | 2 cut(s) | 123, 350 |
| NlaIII | CATG | 2 cut(s) | 214, 292 |
| NmeAIII | GCCGAG | 1 cut(s) | 103 |
| NspI | RCATGY | 1 cut(s) | 214 |
| PciI | ACATGT | 1 cut(s) | 210 |
| PdmI | GAANNNNTTC | 1 cut(s) | 86 |
| PfeI | GAWTC | 3 cut(s) | 173, 297, 326 |
| PscI | ACATGT | 1 cut(s) | 210 |
| PsuI | RGATCY | 1 cut(s) | 350 |
| SaqAI | TTAA | 1 cut(s) | 168 |
| Sau3AI | GATC | 2 cut(s) | 123, 350 |
| SetI | ASST | 5 cut(s) | 15, 29, 270, 286, 343 |
| SmlI | CTYRAG | 1 cut(s) | 346 |
| SmoI | CTYRAG | 1 cut(s) | 346 |
| Sse9I | AATT | 4 cut(s) | 43, 72, 86, 191 |
| SsiI | CCGC | 1 cut(s) | 34 |
| SspMI | CTAG | 1 cut(s) | 230 |
| TaiI | ACGT | 1 cut(s) | 286 |
| TaqI | TCGA | 2 cut(s) | 271, 300 |
| TasI | AATT | 4 cut(s) | 43, 72, 86, 191 |
| TfiI | GAWTC | 3 cut(s) | 173, 297, 326 |
| Tru1I | TTAA | 1 cut(s) | 168 |
| Tru9I | TTAA | 1 cut(s) | 168 |
| TspDTI | ATGAA | 2 cut(s) | 17, 19 |
| XapI | RAATTY | 3 cut(s) | 43, 86, 191 |
| XbaI | TCTAGA | 1 cut(s) | 229 |
| XceI | RCATGY | 1 cut(s) | 214 |
| XmnI | GAANNNNTTC | 1 cut(s) | 86 |
| XspI | CTAG | 1 cut(s) | 230 |