Paired amphipathic helix protein Sin3-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g13800 |
| malus_domestica | MD04G1010500.v1.1 |
| prunus_persica | Prupe.1G010200_v2.0.a1 |
| pyrus_communis | pycom04g00860 |
| rosa_chinensis | RchiOBHm_Chr4g0414721 |
| rosa_laevigata | RLG00000008100 RLG00000008121 |
| rosa_multiflora | Rmu_sc0001192.1_g000028 Rmu_sc0003611.1_g000015 Rmu_sc0008157.1_g000009 Rmu_sc0010606.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00358530 Rroxscaffold_5G00358820 |
| rosa_rugosa | Rorug04G0130200 Rorug04G0130200 Rorug04G0132000 |
| rosa_samantha | Rh4AG188500 Rh4AG191300 Rh4BG187500 Rh4BG189400 Rh4CG200800 Rh4CG202200 Rh4DG187100 Rh4DG189800 |
| rosa_wichuraiana | Rw4G016080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 34 |
| AcsI | RAATTY | 3 cut(s) | 43, 86, 191 |
| AflIII | ACRYGT | 1 cut(s) | 210 |
| AgsI | TTSAA | 2 cut(s) | 91, 191 |
| Alw21I | GWGCWC | 1 cut(s) | 363 |
| Alw26I | GTCTC | 1 cut(s) | 15 |
| Ama87I | CYCGRG | 1 cut(s) | 356 |
| ApoI | RAATTY | 3 cut(s) | 43, 86, 191 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 86 |
| AsuC2I | CCSGG | 1 cut(s) | 69 |
| AvaI | CYCGRG | 1 cut(s) | 356 |
| BauI | CACGAG | 1 cut(s) | 332 |
| Bbv12I | GWGCWC | 1 cut(s) | 363 |
| BccI | CCATC | 1 cut(s) | 295 |
| BclI | TGATCA | 1 cut(s) | 123 |
| BcnI | CCSGG | 1 cut(s) | 69 |
| BcoDI | GTCTC | 1 cut(s) | 15 |
| BfaI | CTAG | 2 cut(s) | 230, 364 |
| Bme1390I | CCNGG | 1 cut(s) | 69 |
| BmeT110I | CYCGRG | 1 cut(s) | 356 |
| BmrFI | CCNGG | 1 cut(s) | 69 |
| BpuMI | CCSGG | 1 cut(s) | 69 |
| BsaBI | GATNNNNATC | 1 cut(s) | 183 |
| Bse8I | GATNNNNATC | 1 cut(s) | 183 |
| BseGI | GGATG | 3 cut(s) | 30, 310, 352 |
| BseJI | GATNNNNATC | 1 cut(s) | 183 |
| BseMII | CTCAG | 1 cut(s) | 231 |
| BsgI | GTGCAG | 1 cut(s) | 119 |
| BsiHKAI | GWGCWC | 1 cut(s) | 363 |
| BsiHKCI | CYCGRG | 1 cut(s) | 356 |
| BsiSI | CCGG | 1 cut(s) | 69 |
| BsmAI | GTCTC | 1 cut(s) | 15 |
| BsoBI | CYCGRG | 1 cut(s) | 356 |
| Bsp1286I | GDGCHC | 1 cut(s) | 363 |
| Bsp143I | GATC | 1 cut(s) | 123 |
| BspACI | CCGC | 1 cut(s) | 34 |
| BspCNI | CTCAG | 1 cut(s) | 232 |
| BssMI | GATC | 1 cut(s) | 123 |
| BssSI | CACGAG | 1 cut(s) | 332 |
| Bst2BI | CACGAG | 1 cut(s) | 332 |
| BstDEI | CTNAG | 2 cut(s) | 240, 253 |
| BstF5I | GGATG | 3 cut(s) | 30, 310, 352 |
| BstKTI | GATC | 1 cut(s) | 126 |
| BstMAI | GTCTC | 1 cut(s) | 15 |
| BstMBI | GATC | 1 cut(s) | 123 |
| BstNSI | RCATGY | 1 cut(s) | 214 |
| BstSCI | CCNGG | 1 cut(s) | 67 |
| BtsCI | GGATG | 3 cut(s) | 30, 310, 352 |
| BtsI | GCAGTG | 1 cut(s) | 84 |
| BtsIMutI | CAGTG | 1 cut(s) | 84 |
| CviAII | CATG | 2 cut(s) | 211, 298 |
| CviJI | RGCY | 2 cut(s) | 67, 320 |
| CviKI_1 | RGCY | 2 cut(s) | 67, 320 |
| DdeI | CTNAG | 2 cut(s) | 240, 253 |
| DpnI | GATC | 1 cut(s) | 125 |
| DpnII | GATC | 1 cut(s) | 123 |
| Eco88I | CYCGRG | 1 cut(s) | 356 |
| EcoRI | GAATTC | 1 cut(s) | 86 |
| FaeI | CATG | 2 cut(s) | 214, 301 |
| FaiI | YATR | 5 cut(s) | 38, 212, 216, 299, 312 |
| FatI | CATG | 2 cut(s) | 210, 297 |
| FbaI | TGATCA | 1 cut(s) | 123 |
| FokI | GGATG | 3 cut(s) | 17, 317, 359 |
| FspBI | CTAG | 2 cut(s) | 230, 364 |
| HapII | CCGG | 1 cut(s) | 69 |
| Hin1II | CATG | 2 cut(s) | 214, 301 |
| HinfI | GANTC | 1 cut(s) | 173 |
| HpaII | CCGG | 1 cut(s) | 69 |
| Hpy188I | TCNGA | 4 cut(s) | 20, 49, 178, 294 |
| Hpy188III | TCNNGA | 7 cut(s) | 111, 158, 188, 230, 275, 334, 356 |
| HpyCH4V | TGCA | 2 cut(s) | 77, 100 |
| HpyF3I | CTNAG | 2 cut(s) | 240, 253 |
| Hsp92II | CATG | 2 cut(s) | 214, 301 |
| Ksp22I | TGATCA | 1 cut(s) | 123 |
| Kzo9I | GATC | 1 cut(s) | 123 |
| LpnPI | CCDG | 5 cut(s) | 82, 86, 124, 143, 260 |
| MaeI | CTAG | 2 cut(s) | 230, 364 |
| MalI | GATC | 1 cut(s) | 125 |
| MboI | GATC | 1 cut(s) | 123 |
| MboII | GAAGA | 2 cut(s) | 62, 73 |
| MhlI | GDGCHC | 1 cut(s) | 363 |
| MluCI | AATT | 4 cut(s) | 43, 72, 86, 191 |
| MnlI | CCTC | 2 cut(s) | 125, 214 |
| MroXI | GAANNNNTTC | 1 cut(s) | 86 |
| MseI | TTAA | 1 cut(s) | 168 |
| MspI | CCGG | 1 cut(s) | 69 |
| MspR9I | CCNGG | 1 cut(s) | 69 |
| NciI | CCSGG | 1 cut(s) | 69 |
| NdeII | GATC | 1 cut(s) | 123 |
| NlaIII | CATG | 2 cut(s) | 214, 301 |
| NspI | RCATGY | 1 cut(s) | 214 |
| PaeR7I | CTCGAG | 1 cut(s) | 356 |
| PciI | ACATGT | 1 cut(s) | 210 |
| PdmI | GAANNNNTTC | 1 cut(s) | 86 |
| PfeI | GAWTC | 1 cut(s) | 173 |
| PscI | ACATGT | 1 cut(s) | 210 |
| SaqAI | TTAA | 1 cut(s) | 168 |
| Sau3AI | GATC | 1 cut(s) | 123 |
| ScrFI | CCNGG | 1 cut(s) | 69 |
| SduI | GDGCHC | 1 cut(s) | 363 |
| SetI | ASST | 2 cut(s) | 15, 29 |
| Sfr274I | CTCGAG | 1 cut(s) | 356 |
| SlaI | CTCGAG | 1 cut(s) | 356 |
| SmlI | CTYRAG | 1 cut(s) | 356 |
| SmoI | CTYRAG | 1 cut(s) | 356 |
| Sse9I | AATT | 4 cut(s) | 43, 72, 86, 191 |
| SsiI | CCGC | 1 cut(s) | 34 |
| SspMI | CTAG | 2 cut(s) | 230, 364 |
| StyD4I | CCNGG | 1 cut(s) | 67 |
| TaqI | TCGA | 2 cut(s) | 316, 357 |
| TasI | AATT | 4 cut(s) | 43, 72, 86, 191 |
| TfiI | GAWTC | 1 cut(s) | 173 |
| Tru1I | TTAA | 1 cut(s) | 168 |
| Tru9I | TTAA | 1 cut(s) | 168 |
| TscAI | CASTG | 1 cut(s) | 84 |
| TspDTI | ATGAA | 2 cut(s) | 17, 339 |
| TspGWI | ACGGA | 1 cut(s) | 299 |
| TspRI | CASTG | 1 cut(s) | 84 |
| XapI | RAATTY | 3 cut(s) | 43, 86, 191 |
| XbaI | TCTAGA | 1 cut(s) | 229 |
| XceI | RCATGY | 1 cut(s) | 214 |
| XhoI | CTCGAG | 1 cut(s) | 356 |
| XmnI | GAANNNNTTC | 1 cut(s) | 86 |
| XspI | CTAG | 2 cut(s) | 230, 364 |