Paired amphipathic helix protein Sin3-like
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g13800 |
| malus_domestica | MD04G1010500.v1.1 |
| prunus_persica | Prupe.1G010200_v2.0.a1 |
| pyrus_communis | pycom04g00860 |
| rosa_chinensis | RchiOBHm_Chr4g0414721 |
| rosa_laevigata | RLG00000008100 RLG00000008121 |
| rosa_multiflora | Rmu_sc0001192.1_g000028 Rmu_sc0003611.1_g000015 Rmu_sc0008157.1_g000009 Rmu_sc0010606.1_g000009 |
| rosa_roxburghii | Rroxscaffold_5G00358530 Rroxscaffold_5G00358820 |
| rosa_rugosa | Rorug04G0130200 Rorug04G0130200 Rorug04G0132000 |
| rosa_samantha | Rh4AG188500 Rh4AG191300 Rh4BG187500 Rh4BG189400 Rh4CG200800 Rh4CG202200 Rh4DG187100 Rh4DG189800 |
| rosa_wichuraiana | Rw4G016080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 161 |
| AcsI | RAATTY | 1 cut(s) | 167 |
| AfaI | GTAC | 2 cut(s) | 39, 51 |
| AgsI | TTSAA | 2 cut(s) | 70, 127 |
| Alw26I | GTCTC | 1 cut(s) | 243 |
| AoxI | GGCC | 1 cut(s) | 30 |
| ApoI | RAATTY | 1 cut(s) | 167 |
| BccI | CCATC | 1 cut(s) | 233 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 260, 294 |
| BcoDI | GTCTC | 1 cut(s) | 243 |
| BglII | AGATCT | 1 cut(s) | 259 |
| BmsI | GCATC | 2 cut(s) | 64, 268 |
| Bpu10I | CCTNAGC | 1 cut(s) | 323 |
| BpuEI | CTTGAG | 1 cut(s) | 63 |
| BsaAI | YACGTR | 1 cut(s) | 37 |
| BsaBI | GATNNNNATC | 1 cut(s) | 258 |
| BsaJI | CCNNGG | 1 cut(s) | 27 |
| Bse3DI | GCAATG | 1 cut(s) | 202 |
| Bse8I | GATNNNNATC | 1 cut(s) | 258 |
| BseDI | CCNNGG | 1 cut(s) | 27 |
| BseGI | GGATG | 1 cut(s) | 79 |
| BseJI | GATNNNNATC | 1 cut(s) | 258 |
| BseMI | GCAATG | 1 cut(s) | 202 |
| BseMII | CTCAG | 1 cut(s) | 207 |
| BshFI | GGCC | 1 cut(s) | 32 |
| BsmAI | GTCTC | 1 cut(s) | 243 |
| BsmBI | CGTCTC | 1 cut(s) | 243 |
| BsnI | GGCC | 1 cut(s) | 32 |
| Bsp143I | GATC | 2 cut(s) | 253, 259 |
| BspANI | GGCC | 1 cut(s) | 32 |
| BspCNI | CTCAG | 1 cut(s) | 208 |
| BsrDI | GCAATG | 1 cut(s) | 202 |
| BssECI | CCNNGG | 1 cut(s) | 27 |
| BssMI | GATC | 2 cut(s) | 253, 259 |
| BssT1I | CCWWGG | 1 cut(s) | 27 |
| Bst6I | CTCTTC | 1 cut(s) | 128 |
| BstBAI | YACGTR | 1 cut(s) | 37 |
| BstDEI | CTNAG | 2 cut(s) | 216, 323 |
| BstF5I | GGATG | 1 cut(s) | 79 |
| BstKTI | GATC | 2 cut(s) | 256, 262 |
| BstMAI | GTCTC | 1 cut(s) | 243 |
| BstMBI | GATC | 2 cut(s) | 253, 259 |
| BstSNI | TACGTA | 1 cut(s) | 37 |
| BstX2I | RGATCY | 1 cut(s) | 259 |
| BstYI | RGATCY | 1 cut(s) | 259 |
| BsuRI | GGCC | 1 cut(s) | 32 |
| BtsCI | GGATG | 1 cut(s) | 79 |
| Csp6I | GTAC | 2 cut(s) | 38, 50 |
| CviJI | RGCY | 2 cut(s) | 32, 114 |
| CviKI_1 | RGCY | 2 cut(s) | 32, 114 |
| CviQI | GTAC | 2 cut(s) | 38, 50 |
| DdeI | CTNAG | 2 cut(s) | 216, 323 |
| DpnI | GATC | 2 cut(s) | 255, 261 |
| DpnII | GATC | 2 cut(s) | 253, 259 |
| DraI | TTTAAA | 1 cut(s) | 225 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 161 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 161 |
| Eam1104I | CTCTTC | 1 cut(s) | 128 |
| EarI | CTCTTC | 1 cut(s) | 128 |
| Eco105I | TACGTA | 1 cut(s) | 37 |
| Eco130I | CCWWGG | 1 cut(s) | 27 |
| EcoRI | GAATTC | 1 cut(s) | 167 |
| EcoT14I | CCWWGG | 1 cut(s) | 27 |
| ErhI | CCWWGG | 1 cut(s) | 27 |
| Esp3I | CGTCTC | 1 cut(s) | 243 |
| FaiI | YATR | 6 cut(s) | 101, 103, 105, 192, 206, 266 |
| FokI | GGATG | 1 cut(s) | 86 |
| HaeIII | GGCC | 1 cut(s) | 32 |
| HinfI | GANTC | 2 cut(s) | 43, 57 |
| Hpy166II | GTNNAC | 1 cut(s) | 235 |
| Hpy188III | TCNNGA | 3 cut(s) | 80, 248, 257 |
| Hpy8I | GTNNAC | 1 cut(s) | 235 |
| Hpy99I | CGWCG | 1 cut(s) | 167 |
| HpyCH4IV | ACGT | 1 cut(s) | 36 |
| HpyCH4V | TGCA | 1 cut(s) | 184 |
| HpyF3I | CTNAG | 2 cut(s) | 216, 323 |
| HpySE526I | ACGT | 1 cut(s) | 36 |
| Kzo9I | GATC | 2 cut(s) | 253, 259 |
| LmnI | GCTCC | 2 cut(s) | 289, 304 |
| LweI | GCATC | 2 cut(s) | 64, 268 |
| MaeII | ACGT | 1 cut(s) | 36 |
| MalI | GATC | 2 cut(s) | 255, 261 |
| MboI | GATC | 2 cut(s) | 253, 259 |
| MboII | GAAGA | 2 cut(s) | 110, 115 |
| MflI | RGATCY | 1 cut(s) | 259 |
| MluCI | AATT | 3 cut(s) | 167, 201, 313 |
| MlyI | GAGTC | 1 cut(s) | 66 |
| MnlI | CCTC | 1 cut(s) | 104 |
| MseI | TTAA | 2 cut(s) | 89, 224 |
| NdeII | GATC | 2 cut(s) | 253, 259 |
| PfeI | GAWTC | 1 cut(s) | 43 |
| PleI | GAGTC | 1 cut(s) | 65 |
| PpsI | GAGTC | 1 cut(s) | 65 |
| Ppu21I | YACGTR | 1 cut(s) | 37 |
| PsuI | RGATCY | 1 cut(s) | 259 |
| RsaI | GTAC | 2 cut(s) | 39, 51 |
| RsaNI | GTAC | 2 cut(s) | 38, 50 |
| SaqAI | TTAA | 2 cut(s) | 89, 224 |
| Sau3AI | GATC | 2 cut(s) | 253, 259 |
| SchI | GAGTC | 1 cut(s) | 66 |
| SetI | ASST | 3 cut(s) | 39, 135, 191 |
| SfaNI | GCATC | 2 cut(s) | 64, 268 |
| SmlI | CTYRAG | 1 cut(s) | 78 |
| SmoI | CTYRAG | 1 cut(s) | 78 |
| SnaBI | TACGTA | 1 cut(s) | 37 |
| Sse9I | AATT | 3 cut(s) | 167, 201, 313 |
| StyI | CCWWGG | 1 cut(s) | 27 |
| TaiI | ACGT | 1 cut(s) | 39 |
| TaqI | TCGA | 2 cut(s) | 165, 247 |
| TasI | AATT | 3 cut(s) | 167, 201, 313 |
| TatI | WGTACW | 1 cut(s) | 49 |
| TfiI | GAWTC | 1 cut(s) | 43 |
| Tru1I | TTAA | 2 cut(s) | 89, 224 |
| Tru9I | TTAA | 2 cut(s) | 89, 224 |
| TspDTI | ATGAA | 2 cut(s) | 281, 326 |
| XapI | RAATTY | 1 cut(s) | 167 |