FvH4_4g14150
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0014715
Physical Location & Seq
Reverse (-)
17731726 .. 17733167
1442 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g14150.t1

Sequence Viewer

Length: 1209 bp
ATGGTACCCAAGTTTAGGGCAAGTGTGACTTTGCGATTAGAGGGTAACCATTTCGTATCACCGAGTTCCACTAGAAAGATGAGTGCTATGGTGCTTGTTGTGGTTCTGATTGGAGCCACGATTGGACTAGTGCTTGTCCTAGGGCTTGCCTTTTTCCTCTATAAGAGGAAACTTGAGGCTTCTAACACTGAATCTAATGCACACGGTGATATTAATGTTCCTGATACAAATAGGACTAGAATTTTGGTTGATGTAGTGAGGCATGCAACCAACAATTTCAGACAGGATAATTTAATAGGAACAGGGGGGTTTTCTAGTGTTTTTAGAGCAGAGATAGATAGGAAAATAGTTGCAGTAAAAACCATAGGCCGAATGAGATCTGGTAGGGCAGTTGATGAGGCAATAAGGTCGTTTGAGCGTGAGGTTGACGTCCTCACCAAACTACGACATGCTAACTTGGTAGGACTAGTAGGATATTGTTGGGATGCAGAAACCATGATACTTGTCTACGAGTACATGGCTCAAGGCAATCTGGGGAACCATCTTTTTAATTGGATAGAAAAAGGACTACGACCCCTTTCTTGGACCACAAGACTCCATATTGCGCTAGATGTGGCAAGAGGGGCCAAAGTAGCTGACTTTGGTCTGATTCGCCCTCTCAGTGGCTATAATGCCACATCTGATACCCAGCCAGCAGGAACTGCTGGATACAAGGCTCCAGAATATGCGTTATATAAACAAATATCTGTTAAGGCAGATGTGTTTAGTTTCGGAGTCATCTTACTGGAGTTGATCACCGGTAAGAAGGCAGTTGATCAAAGCTTGACTGAGTCGCATCCACACCTCCCAAATTGGTTCTGCAACAAAGTAATTAACAAGGGCGGGGGCGGCATTGTTTGGGATGAACTCGAGAAGGTTATTGACCCCACAATGGCAGTTTATACGGATCCGAACACTGTTGACTCCTTTTTAGAAATTGCCAAGCTAGCCATTAGCTGCTGCAACAAGGATCCCGACTTGAGGCCCGAAATGACACATGTTGTCAACATAATCGGGCAGCTGGTGAAGCCATGGAAGCCATCAGAACCCCTTCCTGAAAATTTGGAGCAGGCAGCCGATGGAATGGATTGGATCAACATTCCTCTCCCTGATATGGTGAAGCGTTGGGAGCGTGGTGAACCTTCTGGTCAAGCCAGTTCGTCCGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

403

Amino Acids

44.5

Weight (kDa)

7.13

Isoelectric Point (pI)

35.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 94 - 182 7.3e-12 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 95 - 209 6.1e-15 Protein tyrosine and serine/threonine kinase
PK_Tyr_Ser-Thr PF07714 207 - 349 3e-11 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 208 - 349 1.5e-12 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 432
Acc65I GGTACC 1 cut(s) 4
AccB1I GGYRCC 1 cut(s) 4
AccI GTMKAC 1 cut(s) 507
AciI CCGC 2 cut(s) 882, 888
AclWI GGATC 5 cut(s) 941, 954, 1004, 1017, 1139
AcsI RAATTY 2 cut(s) 240, 1099
AcyI GRCGYC 1 cut(s) 429
AdeI CACNNNGTG 1 cut(s) 206
AfaI GTAC 2 cut(s) 6, 515
AfiI CCNNNNNNNGG 6 cut(s) 15, 582, 662, 931, 1020, 1153
AflIII ACRYGT 1 cut(s) 1036
AgeI ACCGGT 1 cut(s) 797
AhlI ACTAGT 2 cut(s) 127, 466
AluBI AGCT 5 cut(s) 635, 822, 985, 996, 1060
AluI AGCT 5 cut(s) 635, 822, 985, 996, 1060
AlwI GGATC 5 cut(s) 941, 954, 1004, 1017, 1139
AlwNI CAGNNNCTG 1 cut(s) 701
Ama87I CYCGRG 1 cut(s) 908
AoxI GGCC 3 cut(s) 367, 624, 1022
ApeKI GCWGC 4 cut(s) 996, 999, 1057, 1112
ApoI RAATTY 2 cut(s) 240, 1099
ArsI GACNNNNNNTTYG 2 cut(s) 226, 258
AseI ATTAAT 1 cut(s) 213
AsiGI ACCGGT 1 cut(s) 797
Asp700I GAANNNNTTC 1 cut(s) 1089
Asp718I GGTACC 1 cut(s) 4
AspA2I CCTAGG 1 cut(s) 139
AspLEI GCGC 1 cut(s) 607
AspS9I GGNCC 3 cut(s) 585, 624, 1023
AsuHPI GGTGA 7 cut(s) 51, 218, 427, 787, 1075, 1168, 1187
AsuNHI GCTAGC 1 cut(s) 985
AvaI CYCGRG 1 cut(s) 908
AvaII GGWCC 1 cut(s) 585
AvrII CCTAGG 1 cut(s) 139
BaeI ACNNNNGTAYC 1 cut(s) 29
BamHI GGATCC 2 cut(s) 946, 1009
BanI GGYRCC 1 cut(s) 4
BbvI GCAGC 4 cut(s) 983, 986, 1069, 1124
BccI CCATC 3 cut(s) 549, 1087, 1112
BcgI CGANNNNNNTGC 2 cut(s) 390, 424
BciVI GTATCC 1 cut(s) 701
BclI TGATCA 2 cut(s) 792, 814
BcuI ACTAGT 2 cut(s) 127, 466
BfaI CTAG 8 cut(s) 72, 128, 140, 237, 315, 467, 608, 986
BfuI GTATCC 1 cut(s) 701
BglII AGATCT 1 cut(s) 377
BisI GCNGC 5 cut(s) 889, 997, 1000, 1058, 1113
BlnI CCTAGG 1 cut(s) 139
BlsI GCNGC 5 cut(s) 890, 998, 1001, 1059, 1114
Bme18I GGWCC 1 cut(s) 585
BmeT110I CYCGRG 1 cut(s) 908
BmgT120I GGNCC 3 cut(s) 585, 624, 1023
BmiI GGNNCC 7 cut(s) 6, 115, 539, 625, 717, 948, 1011
BmsI GCATC 2 cut(s) 475, 844
BmtI GCTAGC 1 cut(s) 989
BoxI GACNNNNGTC 1 cut(s) 642
BpmI CTGGAG 2 cut(s) 702, 806
BpuEI CTTGAG 3 cut(s) 194, 507, 1039
BsaHI GRCGYC 1 cut(s) 429
BsaJI CCNNGG 2 cut(s) 139, 1070
BsaWI WCCGGW 1 cut(s) 797
Bsc4I CCNNNNNNNGG 6 cut(s) 15, 582, 662, 931, 1020, 1153
Bse118I RCCGGY 1 cut(s) 797
Bse1I ACTGG 2 cut(s) 789, 1194
BseDI CCNNGG 2 cut(s) 139, 1070
BseGI GGATG 3 cut(s) 490, 835, 907
BseLI CCNNNNNNNGG 6 cut(s) 15, 582, 662, 931, 1020, 1153
BseMII CTCAG 2 cut(s) 673, 819
BseNI ACTGG 2 cut(s) 789, 1194
BseXI GCAGC 4 cut(s) 983, 986, 1069, 1124
BseYI CCCAGC 1 cut(s) 687
BshFI GGCC 3 cut(s) 369, 626, 1024
BshNI GGYRCC 1 cut(s) 4
BshTI ACCGGT 1 cut(s) 797
BsiHKCI CYCGRG 1 cut(s) 908
BsiSI CCGG 1 cut(s) 798
BslI CCNNNNNNNGG 6 cut(s) 15, 582, 662, 931, 1020, 1153
BsnI GGCC 3 cut(s) 369, 626, 1024
BsoBI CYCGRG 1 cut(s) 908
Bsp143I GATC 6 cut(s) 377, 792, 814, 946, 1009, 1131
Bsp19I CCATGG 1 cut(s) 1070
BspACI CCGC 2 cut(s) 882, 888
BspANI GGCC 3 cut(s) 369, 626, 1024
BspCNI CTCAG 2 cut(s) 672, 820
BspLI GGNNCC 7 cut(s) 6, 115, 539, 625, 717, 948, 1011
BspOI GCTAGC 1 cut(s) 989
BspPI GGATC 5 cut(s) 941, 954, 1004, 1017, 1139
BspT107I GGYRCC 1 cut(s) 4
BsrFI RCCGGY 1 cut(s) 797
BsrI ACTGG 2 cut(s) 789, 1194
BssAI RCCGGY 1 cut(s) 797
BssECI CCNNGG 2 cut(s) 139, 1070
BssMI GATC 6 cut(s) 377, 792, 814, 946, 1009, 1131
BssNI GRCGYC 1 cut(s) 429
BssT1I CCWWGG 2 cut(s) 139, 1070
Bst4CI ACNGT 2 cut(s) 206, 958
BstACI GRCGYC 1 cut(s) 429
BstAPI GCANNNNNTGC 1 cut(s) 701
BstC8I GCNNGC 5 cut(s) 147, 264, 693, 987, 1110
BstDEI CTNAG 2 cut(s) 659, 828
BstDSI CCRYGG 1 cut(s) 1070
BstEII GGTNACC 1 cut(s) 44
BstF5I GGATG 3 cut(s) 490, 835, 907
BstHHI GCGC 1 cut(s) 607
BstKTI GATC 6 cut(s) 380, 795, 817, 949, 1012, 1134
BstMBI GATC 6 cut(s) 377, 792, 814, 946, 1009, 1131
BstMWI GCNNNNNNNGC 8 cut(s) 623, 632, 701, 888, 986, 1066, 1075, 1168
BstNSI RCATGY 3 cut(s) 266, 452, 1040
BstPAI GACNNNNGTC 1 cut(s) 642
BstPI GGTNACC 1 cut(s) 44
BstV1I GCAGC 4 cut(s) 983, 986, 1069, 1124
BstX2I RGATCY 3 cut(s) 377, 946, 1009
BstYI RGATCY 3 cut(s) 377, 946, 1009
BsuI GTATCC 1 cut(s) 701
BsuRI GGCC 3 cut(s) 369, 626, 1024
BtgI CCRYGG 1 cut(s) 1070
BtsCI GGATG 3 cut(s) 490, 835, 907
BtsIMutI CAGTG 3 cut(s) 186, 667, 954
Cac8I GCNNGC 5 cut(s) 147, 264, 693, 987, 1110
CaiI CAGNNNCTG 1 cut(s) 701
CfoI GCGC 1 cut(s) 607
Cfr10I RCCGGY 1 cut(s) 797
Cfr13I GGNCC 3 cut(s) 585, 624, 1023
Csp6I GTAC 2 cut(s) 5, 514
CspAI ACCGGT 1 cut(s) 797
CviAII CATG 6 cut(s) 263, 449, 496, 517, 1037, 1071
CviQI GTAC 2 cut(s) 5, 514
DdeI CTNAG 2 cut(s) 659, 828
DpnI GATC 6 cut(s) 379, 794, 816, 948, 1011, 1133
DpnII GATC 6 cut(s) 377, 792, 814, 946, 1009, 1131
DraIII CACNNNGTG 1 cut(s) 206
Eco130I CCWWGG 2 cut(s) 139, 1070
Eco47I GGWCC 1 cut(s) 585
Eco88I CYCGRG 1 cut(s) 908
Eco91I GGTNACC 1 cut(s) 44
EcoO65I GGTNACC 1 cut(s) 44
EcoT14I CCWWGG 2 cut(s) 139, 1070
ErhI CCWWGG 2 cut(s) 139, 1070
FaeI CATG 6 cut(s) 266, 452, 499, 520, 1040, 1074
FalI AAGNNNNNCTT 2 cut(s) 13, 45
FatI CATG 6 cut(s) 262, 448, 495, 516, 1036, 1070
FauI CCCGC 1 cut(s) 875
FbaI TGATCA 2 cut(s) 792, 814
FblI GTMKAC 1 cut(s) 507
Fnu4HI GCNGC 5 cut(s) 889, 997, 1000, 1058, 1113
FokI GGATG 3 cut(s) 497, 822, 914
Fsp4HI GCNGC 5 cut(s) 889, 997, 1000, 1058, 1113
FspBI CTAG 8 cut(s) 72, 128, 140, 237, 315, 467, 608, 986
GlaI GCGC 1 cut(s) 606
GluI GCNGC 5 cut(s) 889, 997, 1000, 1058, 1113
GsaI CCCAGC 1 cut(s) 691
GsuI CTGGAG 2 cut(s) 702, 806
HaeIII GGCC 3 cut(s) 369, 626, 1024
HapII CCGG 1 cut(s) 798
HhaI GCGC 1 cut(s) 607
Hin1I GRCGYC 1 cut(s) 429
Hin1II CATG 6 cut(s) 266, 452, 499, 520, 1040, 1074
Hin6I GCGC 1 cut(s) 605
HinP1I GCGC 1 cut(s) 605
HincII GTYRAC 3 cut(s) 427, 961, 1045
HindII GTYRAC 3 cut(s) 427, 961, 1045
HindIII AAGCTT 1 cut(s) 820
HinfI GANTC 6 cut(s) 191, 594, 649, 774, 830, 962
HpaII CCGG 1 cut(s) 798
HphI GGTGA 7 cut(s) 51, 218, 427, 787, 1075, 1168, 1187
Hpy166II GTNNAC 5 cut(s) 427, 508, 961, 1045, 1178
Hpy188I TCNGA 8 cut(s) 108, 281, 648, 682, 773, 951, 1084, 1204
Hpy188III TCNNGA 5 cut(s) 221, 719, 910, 1013, 1094
Hpy8I GTNNAC 5 cut(s) 427, 508, 961, 1045, 1178
HpyAV CCTTC 4 cut(s) 799, 907, 1100, 1191
HpyCH4III ACNGT 2 cut(s) 206, 958
HpyCH4IV ACGT 1 cut(s) 429
HpyCH4V TGCA 6 cut(s) 200, 266, 353, 488, 861, 1002
HpyF10VI GCNNNNNNNGC 8 cut(s) 623, 632, 701, 888, 986, 1066, 1075, 1168
HpyF3I CTNAG 2 cut(s) 659, 828
HpySE526I ACGT 1 cut(s) 429
Hsp92I GRCGYC 1 cut(s) 429
Hsp92II CATG 6 cut(s) 266, 452, 499, 520, 1040, 1074
HspAI GCGC 1 cut(s) 605
KpnI GGTACC 1 cut(s) 8
Ksp22I TGATCA 2 cut(s) 792, 814
Kzo9I GATC 6 cut(s) 377, 792, 814, 946, 1009, 1131
LmnI GCTCC 4 cut(s) 113, 721, 1105, 1168
Lsp1109I GCAGC 4 cut(s) 983, 986, 1069, 1124
LweI GCATC 2 cut(s) 475, 844
MaeI CTAG 8 cut(s) 72, 128, 140, 237, 315, 467, 608, 986
MaeII ACGT 1 cut(s) 429
MaeIII GTNAC 2 cut(s) 25, 44
MalI GATC 6 cut(s) 379, 794, 816, 948, 1011, 1133
MboI GATC 6 cut(s) 377, 792, 814, 946, 1009, 1131
MflI RGATCY 3 cut(s) 377, 946, 1009
MluCI AATT 8 cut(s) 240, 274, 289, 550, 850, 870, 975, 1099
MlyI GAGTC 4 cut(s) 588, 783, 839, 956
MroXI GAANNNNTTC 1 cut(s) 1089
MseI TTAA 5 cut(s) 213, 293, 549, 750, 873
MspA1I CMGCKG 1 cut(s) 1060
MspI CCGG 1 cut(s) 798
MwoI GCNNNNNNNGC 8 cut(s) 623, 632, 701, 888, 986, 1066, 1075, 1168
NcoI CCATGG 1 cut(s) 1070
NdeII GATC 6 cut(s) 377, 792, 814, 946, 1009, 1131
NheI GCTAGC 1 cut(s) 985
NlaIII CATG 6 cut(s) 266, 452, 499, 520, 1040, 1074
NlaIV GGNNCC 7 cut(s) 6, 115, 539, 625, 717, 948, 1011
NmuCI GTSAC 1 cut(s) 25
NspI RCATGY 3 cut(s) 266, 452, 1040
PaeI GCATGC 1 cut(s) 266
PaeR7I CTCGAG 1 cut(s) 908
PciI ACATGT 1 cut(s) 1036
PdmI GAANNNNTTC 1 cut(s) 1089
PfeI GAWTC 2 cut(s) 191, 649
PflFI GACNNNGTC 1 cut(s) 829
PinAI ACCGGT 1 cut(s) 797
PkrI GCNGC 5 cut(s) 890, 998, 1001, 1059, 1114
PleI GAGTC 4 cut(s) 588, 782, 838, 956
PpsI GAGTC 4 cut(s) 588, 782, 838, 956
PscI ACATGT 1 cut(s) 1036
PshAI GACNNNNGTC 1 cut(s) 642
PshBI ATTAAT 1 cut(s) 213
PspEI GGTNACC 1 cut(s) 44
PspFI CCCAGC 1 cut(s) 687
PspN4I GGNNCC 7 cut(s) 6, 115, 539, 625, 717, 948, 1011
PspPI GGNCC 3 cut(s) 585, 624, 1023
PstNI CAGNNNCTG 1 cut(s) 701
PsuI RGATCY 3 cut(s) 377, 946, 1009
PsyI GACNNNGTC 1 cut(s) 829
PvuII CAGCTG 1 cut(s) 1060
RsaI GTAC 2 cut(s) 6, 515
RsaNI GTAC 2 cut(s) 5, 514
SaqAI TTAA 5 cut(s) 213, 293, 549, 750, 873
SatI GCNGC 5 cut(s) 889, 997, 1000, 1058, 1113
Sau3AI GATC 6 cut(s) 377, 792, 814, 946, 1009, 1131
Sau96I GGNCC 3 cut(s) 585, 624, 1023
SchI GAGTC 4 cut(s) 588, 783, 839, 956
SfaNI GCATC 2 cut(s) 475, 844
Sfr274I CTCGAG 1 cut(s) 908
SinI GGWCC 1 cut(s) 585
SlaI CTCGAG 1 cut(s) 908
SmlI CTYRAG 4 cut(s) 173, 522, 908, 1018
SmoI CTYRAG 4 cut(s) 173, 522, 908, 1018
SpeI ACTAGT 2 cut(s) 127, 466
SphI GCATGC 1 cut(s) 266
Sse9I AATT 8 cut(s) 240, 274, 289, 550, 850, 870, 975, 1099
SsiI CCGC 2 cut(s) 882, 888
SspMI CTAG 8 cut(s) 72, 128, 140, 237, 315, 467, 608, 986
StyI CCWWGG 2 cut(s) 139, 1070
TaaI ACNGT 2 cut(s) 206, 958
TaiI ACGT 1 cut(s) 432
TaqI TCGA 1 cut(s) 909
TasI AATT 8 cut(s) 240, 274, 289, 550, 850, 870, 975, 1099
TatI WGTACW 1 cut(s) 513
TauI GCSGC 1 cut(s) 891
TfiI GAWTC 2 cut(s) 191, 649
Tru1I TTAA 5 cut(s) 213, 293, 549, 750, 873
Tru9I TTAA 5 cut(s) 213, 293, 549, 750, 873
TscAI CASTG 3 cut(s) 193, 667, 961
TseFI GTSAC 1 cut(s) 25
TseI GCWGC 4 cut(s) 996, 999, 1057, 1112
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 1 cut(s) 918
TspGWI ACGGA 1 cut(s) 959
TspRI CASTG 3 cut(s) 193, 667, 961
Tth111I GACNNNGTC 1 cut(s) 829
VpaK11BI GGWCC 1 cut(s) 585
VspI ATTAAT 1 cut(s) 213
XapI RAATTY 2 cut(s) 240, 1099
XceI RCATGY 3 cut(s) 266, 452, 1040
XhoI CTCGAG 1 cut(s) 908
XmaJI CCTAGG 1 cut(s) 139
XmiI GTMKAC 1 cut(s) 507
XmnI GAANNNNTTC 1 cut(s) 1089
XspI CTAG 8 cut(s) 72, 128, 140, 237, 315, 467, 608, 986
ZraI GACGTC 1 cut(s) 430
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.