Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0014715

Physical Location & Seq

Genomic Coordinates Reverse (-)

57920269 .. 57934162

Gene Structure 13894 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG262900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1977 bp

ATGATGAAGAAGAAGGCAATGTCACTCATCCTCTTGGTCTTGCTGATCGCTGTAGACAGGATCTCAGCATATGGTAGTGATCGGGAGCTATCAGTATTGCAAGGTCTCCACCAAAGCCTCGGTCCTAACAGGTTAAATTGGTCGGGTTCTGACTACTGCAGTTGGTTGAATATATCTTGCAACGAGGATGGAATGGTGGGATCGATTAATTTAAGCGGCCAAAACCTGACGGGAACACTGCCTGCCTCTATTGGAAGCTTGAAATATTTGAAGACACTAGATGTTTCTTACAATCAGATAAGTGGACCCTTCCCAGCCCTATATAGTTTGCAGTTGCTTGAAATTCTTCGAGCCCAAAACAACAACTTCTCTTCATTTCCAGAAGAGTTGTTCAGTTCCCAGCTCACAGCCCTCAGTGACATAGATATCAGTTATAATTCATTTGCACCATGGAATATTACTGGTCACTGTGGGGAGCTTCAGTATTTTCATGCTTCAAATGCCAATATTAGGGGAGCGATAGATGTTCTCACCTGCATCAATTTTCCAAGGTTGGTTAGATTGAACTTGTCTAATAACCAGCTGAATGGTACTATACCATTGGACATTAAAGAATTGCAATTTCTAAGAGTGTTGGATCTTTCCAATAACAAACTGAGTGGTCGGGTACCTGAATTTGGGAAAAAGATTCGTGTTAGATTAGATGGAAACCTGGATCTAAAGTGGGACACTGGCCATTCCCATCACGCTGTGCTCCTTATAGTGATTGGTTGTGTTGGTGGGCTGCTTATTGTAGTGATCGGGATTGTTGGTCTAATATTTTACCTTAAGAAAAAACAACTCCCATCCGGTGAGCAAAATGTGGTAGAGCTCACTGCTAACCCTAGCACGCAATCTAGTCAAGCCATTGATGTGCATTCAAGTCAAGCCCTTGATGTTATTGCGCTTAAACAGTTTTCCCTTGAGAACTTGATGATGGCTACTAGTAGTTTTACTGAAGCCAATCTTTTGGGAAAAGGGGGATTTGCAAAGGTTTTTAAAGGAGTTTGGGAGAACACAGAAATTGCAGTGAAGAGGATGAACAAGATACGGTCGGGAGTGGAGGCTAGTAATGCTTTAGATATGTTCAAGTCGGAGGTTGAATTGCTTTCCAAACTCCAACACAGAAACTTAGTTGCACTCATTGGTTATTGCTGGAATGAAGACGAAAAGATTTTAGTTTATGAATACATGCCTCAAGGGACTCTTAGAAGGCATTTGTTCGAATGGAAACAAGAAAATCTGAGTCCTCTTGACTGGCCTACAAGACTGAGTATAGCTTTCGATATCGCAAAAGGTGTTGATTATCTACATTCTGCAACCAACCAGATACTTGTCCACCGGGACTTGAAACCTACAAATATTTTACTTGGAGCTAACATGCGGGCTAAAGTTGCAGATTTTGGATTAGTGTATTCCTTGCCAGAAGGAAAAGACTACATTATGACTCCCATGGCAGGAACACAAGGCTATTGGCCTGAAGAATGTGTTGATGGAAAGATATCTGACACTTCAGATGTGTATACATTTGGAATACTTCTATTGGAACTCATTAGTGGAGGAAAAGTAAATGATTCTGTCTTCTTGCCAACATGGTTCCTAGATACCCTAAATACCAGGGATGAGAAGGGGAAAATCATCGAGTATGTTAACAAGTCTTATCTTGGCCAGGTTATTGATCCGGTAATAGATATATCGAATGAAACTCTGGTAGCTATTGCTAACGTTGCTGAATTGGCCTTGCACTGCATCCACCGTAAGTTTGATAGCAGGCCTTCCATTGCTCGTGTATTGGGTGTGCTTACTTTGCTCATTGATAGCTGGAAGCCACCACAGCCTGAAGAAGTCCAACAGAGATTGACAGTAAAAGAAGCATTTAGGAGGATTGATTCGGCTGCATCAACTAGCAAGCGGTGCATGTGGTCATGTTTGAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005576 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_4 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

658

Amino Acids

73.27

Weight (kDa)

6.38

Isoelectric Point (pI)

35.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	332 - 536	9.9e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	335 - 610	9e-42	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014715)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g14150
rosa_chinensis	RchiOBHm_Chr3g0492421
rosa_multiflora	Rmu_sc0002094.1_g000015 Rmu_sc0034092.1_g000001
rosa_roxburghii	Rroxscaffold_5G00368510 Rroxscaffold_6G00399240
rosa_rugosa	Rorug03G0196400 Rorug04G0206100
rosa_samantha	Rh3CG280300 Rh3DG276400 Rh4AG262900 Rh4BG269000 Rh4CG281100 Rh4CG281200 Rh4CG288700 Rh4DG265300
rosa_wichuraiana	Rw3G022380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	435
AarI	CACCTGC	1 cut(s)	542
Acc36I	ACCTGC	1 cut(s)	542
Acc65I	GGTACC	1 cut(s)	667
AccB1I	GGYRCC	1 cut(s)	667
AccI	GTMKAC	2 cut(s)	54, 1562
AciI	CCGC	3 cut(s)	216, 1423, 1951
AclI	AACGTT	1 cut(s)	1764
AclWI	GGATC	5 cut(s)	68, 208, 645, 723, 1712
AcoI	YGGCCR	3 cut(s)	217, 733, 1705
AcsI	RAATTY	2 cut(s)	342, 674
AcuI	CTGAAG	5 cut(s)	464, 1017, 1536, 1539, 1899
AdeI	CACNNNGTG	1 cut(s)	751
AfaI	GTAC	2 cut(s)	592, 669
AfiI	CCNNNNNNNGG	3 cut(s)	510, 677, 1496
AflII	CTTAAG	1 cut(s)	827
AhlI	ACTAGT	1 cut(s)	983
AjnI	CCWGG	3 cut(s)	711, 1655, 1707
Alw21I	GWGCWC	2 cut(s)	756, 873
Alw26I	GTCTC	1 cut(s)	110
AlwI	GGATC	5 cut(s)	68, 208, 645, 723, 1712
AoxI	GGCC	7 cut(s)	217, 733, 1298, 1514, 1705, 1776, 1811
ApeKI	GCWGC	2 cut(s)	784, 1934
ApoI	RAATTY	2 cut(s)	342, 674
ArsI	GACNNNNNNTTYG	2 cut(s)	106, 138
AseI	ATTAAT	1 cut(s)	207
Asp700I	GAANNNNTTC	1 cut(s)	345
Asp718I	GGTACC	1 cut(s)	667
AspLEI	GCGC	1 cut(s)	946
AspS9I	GGNCC	2 cut(s)	122, 305
AsuC2I	CCSGG	1 cut(s)	1382
AsuHPI	GGTGA	2 cut(s)	523, 863
AsuII	TTCGAA	1 cut(s)	1263
AvaII	GGWCC	2 cut(s)	122, 305
BalI	TGGCCA	2 cut(s)	735, 1707
BanI	GGYRCC	1 cut(s)	667
BanII	GRGCYC	2 cut(s)	355, 873
BauI	CACGAG	1 cut(s)	1824
BbsI	GAAGAC	3 cut(s)	278, 1209, 1612
Bbv12I	GWGCWC	2 cut(s)	756, 873
BbvI	GCAGC	2 cut(s)	771, 1921
BccI	CCATC	6 cut(s)	182, 698, 750, 853, 970, 1526
BciT130I	CCWGG	3 cut(s)	713, 1657, 1709
BcnI	CCSGG	1 cut(s)	1382
BcoDI	GTCTC	1 cut(s)	110
BcuI	ACTAGT	1 cut(s)	983
BfaI	CTAG	7 cut(s)	278, 885, 897, 984, 1107, 1640, 1944
BfmI	CTRYAG	2 cut(s)	51, 157
BfrI	CTTAAG	1 cut(s)	827
BfuAI	ACCTGC	1 cut(s)	542
BisI	GCNGC	3 cut(s)	217, 785, 1935
BlsI	GCNGC	3 cut(s)	218, 786, 1936
Bme1390I	CCNGG	4 cut(s)	713, 1382, 1657, 1709
Bme18I	GGWCC	2 cut(s)	122, 305
BmgT120I	GGNCC	2 cut(s)	122, 305
BmiI	GGNNCC	3 cut(s)	307, 669, 1637
BmrFI	CCNGG	4 cut(s)	713, 1382, 1657, 1709
BmsI	GCATC	3 cut(s)	546, 1797, 1946
BpiI	GAAGAC	3 cut(s)	278, 1209, 1612
Bpu14I	TTCGAA	1 cut(s)	1263
BpuEI	CTTGAG	2 cut(s)	983, 1221
BpuMI	CCSGG	1 cut(s)	1382
Bsa29I	ATCGAT	1 cut(s)	203
BsaI	GGTCTC	1 cut(s)	110
BsaJI	CCNNGG	5 cut(s)	118, 449, 548, 1491, 1656
BsaWI	WCCGGW	2 cut(s)	848, 1720
BsaXI	ACNNNNNCTCC	4 cut(s)	467, 497, 1590, 1620
Bsc4I	CCNNNNNNNGG	3 cut(s)	510, 677, 1496
Bse1I	ACTGG	3 cut(s)	466, 736, 1301
Bse3DI	GCAATG	2 cut(s)	24, 1818
BseBI	CCWGG	3 cut(s)	713, 1657, 1709
BseCI	ATCGAT	1 cut(s)	203
BseDI	CCNNGG	5 cut(s)	118, 449, 548, 1491, 1656
BseGI	GGATG	6 cut(s)	27, 193, 845, 1083, 1666, 1788
BseLI	CCNNNNNNNGG	3 cut(s)	510, 677, 1496
BseMI	GCAATG	2 cut(s)	24, 1818
BseMII	CTCAG	5 cut(s)	78, 427, 647, 1274, 1301
BseNI	ACTGG	3 cut(s)	466, 736, 1301
BseXI	GCAGC	2 cut(s)	771, 1921
BseYI	CCCAGC	2 cut(s)	313, 399
Bsh1285I	CGRYCG	1 cut(s)	1094
BshFI	GGCC	7 cut(s)	219, 735, 1300, 1516, 1707, 1778, 1813
BshNI	GGYRCC	1 cut(s)	667
BshVI	ATCGAT	1 cut(s)	203
BsiEI	CGRYCG	1 cut(s)	1094
BsiHKAI	GWGCWC	2 cut(s)	756, 873
BsiSI	CCGG	3 cut(s)	849, 1381, 1721
BslFI	GGGAC	3 cut(s)	740, 1255, 1397
BslI	CCNNNNNNNGG	3 cut(s)	510, 677, 1496
BsmAI	GTCTC	1 cut(s)	110
BsmFI	GGGAC	3 cut(s)	740, 1255, 1397
BsmI	GAATGC	1 cut(s)	916
BsnI	GGCC	7 cut(s)	219, 735, 1300, 1516, 1707, 1778, 1813
Bso31I	GGTCTC	1 cut(s)	110
Bsp119I	TTCGAA	1 cut(s)	1263
Bsp1286I	GDGCHC	3 cut(s)	355, 756, 873
Bsp143I	GATC	8 cut(s)	45, 60, 79, 200, 637, 715, 798, 1717
Bsp19I	CCATGG	2 cut(s)	449, 1491
BspACI	CCGC	3 cut(s)	216, 1423, 1951
BspANI	GGCC	7 cut(s)	219, 735, 1300, 1516, 1707, 1778, 1813
BspCNI	CTCAG	5 cut(s)	77, 426, 648, 1275, 1302
BspDI	ATCGAT	1 cut(s)	203
BspLI	GGNNCC	3 cut(s)	307, 669, 1637
BspMAI	CTGCAG	1 cut(s)	161
BspMI	ACCTGC	1 cut(s)	542
BspPI	GGATC	5 cut(s)	68, 208, 645, 723, 1712
BspT104I	TTCGAA	1 cut(s)	1263
BspT107I	GGYRCC	1 cut(s)	667
BspTI	CTTAAG	1 cut(s)	827
BspTNI	GGTCTC	1 cut(s)	110
BsrDI	GCAATG	2 cut(s)	24, 1818
BsrI	ACTGG	3 cut(s)	466, 736, 1301
BssECI	CCNNGG	5 cut(s)	118, 449, 548, 1491, 1656
BssMI	GATC	8 cut(s)	45, 60, 79, 200, 637, 715, 798, 1717
BssNAI	GTATAC	1 cut(s)	1563
BssSI	CACGAG	1 cut(s)	1824
BssT1I	CCWWGG	3 cut(s)	449, 548, 1491
Bst1107I	GTATAC	1 cut(s)	1563
Bst2BI	CACGAG	1 cut(s)	1824
Bst2UI	CCWGG	3 cut(s)	713, 1657, 1709
Bst4CI	ACNGT	5 cut(s)	470, 954, 1092, 1796, 1903
Bst6I	CTCTTC	3 cut(s)	376, 378, 1067
BstAFI	CTTAAG	1 cut(s)	827
BstAPI	GCANNNNNTGC	1 cut(s)	1953
BstBI	TTCGAA	1 cut(s)	1263
BstC8I	GCNNGC	5 cut(s)	243, 890, 1425, 1811, 1949
BstDEI	CTNAG	8 cut(s)	64, 413, 626, 656, 1171, 1247, 1283, 1310
BstDSI	CCRYGG	2 cut(s)	449, 1491
BstF5I	GGATG	6 cut(s)	27, 193, 845, 1083, 1666, 1788
BstHHI	GCGC	1 cut(s)	946
BstKTI	GATC	8 cut(s)	48, 63, 82, 203, 640, 718, 801, 1720
BstMAI	GTCTC	1 cut(s)	110
BstMBI	GATC	8 cut(s)	45, 60, 79, 200, 637, 715, 798, 1717
BstMCI	CGRYCG	1 cut(s)	1094
BstMWI	GCNNNNNNNGC	8 cut(s)	500, 1112, 1433, 1766, 1775, 1846, 1873, 1953
BstNI	CCWGG	3 cut(s)	713, 1657, 1709
BstNSI	RCATGY	3 cut(s)	1234, 1423, 1960
BstSCI	CCNGG	4 cut(s)	711, 1380, 1655, 1707
BstSFI	CTRYAG	2 cut(s)	51, 157
BstV1I	GCAGC	2 cut(s)	771, 1921
BstV2I	GAAGAC	3 cut(s)	278, 1209, 1612
BstX2I	RGATCY	3 cut(s)	60, 637, 715
BstXI	CCANNNNNNTGG	2 cut(s)	587, 1009
BstYI	RGATCY	3 cut(s)	60, 637, 715
BstZ17I	GTATAC	1 cut(s)	1563
Bsu15I	ATCGAT	1 cut(s)	203
BsuRI	GGCC	7 cut(s)	219, 735, 1300, 1516, 1707, 1778, 1813
BsuTUI	ATCGAT	1 cut(s)	203
BtgI	CCRYGG	2 cut(s)	449, 1491
BtsCI	GGATG	6 cut(s)	27, 193, 845, 1083, 1666, 1788
BtsI	GCAGTG	4 cut(s)	236, 873, 1074, 1783
BtsIMutI	CAGTG	7 cut(s)	236, 421, 466, 729, 873, 1074, 1783
BveI	ACCTGC	1 cut(s)	542
Cac8I	GCNNGC	5 cut(s)	243, 890, 1425, 1811, 1949
CfoI	GCGC	1 cut(s)	946
Cfr13I	GGNCC	2 cut(s)	122, 305
ClaI	ATCGAT	1 cut(s)	203
Csp6I	GTAC	2 cut(s)	591, 668
CspCI	CAANNNNNGTGG	2 cut(s)	640, 675
CviAII	CATG	8 cut(s)	450, 491, 1231, 1420, 1492, 1632, 1957, 1965
CviQI	GTAC	2 cut(s)	591, 668
DdeI	CTNAG	8 cut(s)	64, 413, 626, 656, 1171, 1247, 1283, 1310
DpnI	GATC	8 cut(s)	47, 62, 81, 202, 639, 717, 800, 1719
DpnII	GATC	8 cut(s)	45, 60, 79, 200, 637, 715, 798, 1717
DraI	TTTAAA	1 cut(s)	1039
DraIII	CACNNNGTG	1 cut(s)	751
EaeI	YGGCCR	3 cut(s)	217, 733, 1705
Eam1104I	CTCTTC	3 cut(s)	376, 378, 1067
EarI	CTCTTC	3 cut(s)	376, 378, 1067
Ecl136II	GAGCTC	1 cut(s)	871
Eco130I	CCWWGG	3 cut(s)	449, 548, 1491
Eco147I	AGGCCT	1 cut(s)	1813
Eco24I	GRGCYC	2 cut(s)	355, 873
Eco31I	GGTCTC	1 cut(s)	110
Eco32I	GATATC	3 cut(s)	427, 1327, 1542
Eco47I	GGWCC	2 cut(s)	122, 305
Eco53kI	GAGCTC	1 cut(s)	871
Eco57I	CTGAAG	5 cut(s)	464, 1017, 1536, 1539, 1899
EcoICRI	GAGCTC	1 cut(s)	871
EcoRII	CCWGG	3 cut(s)	711, 1655, 1707
EcoRV	GATATC	3 cut(s)	427, 1327, 1542
EcoT14I	CCWWGG	3 cut(s)	449, 548, 1491
EcoT38I	GRGCYC	2 cut(s)	355, 873
ErhI	CCWWGG	3 cut(s)	449, 548, 1491
FaeI	CATG	8 cut(s)	453, 494, 1234, 1423, 1495, 1635, 1960, 1968
FalI	AAGNNNNNCTT	4 cut(s)	990, 1022, 1230, 1262
FaqI	GGGAC	3 cut(s)	740, 1255, 1397
FatI	CATG	8 cut(s)	449, 490, 1230, 1419, 1491, 1631, 1956, 1964
FauI	CCCGC	1 cut(s)	1416
FauNDI	CATATG	1 cut(s)	70
FblI	GTMKAC	2 cut(s)	54, 1562
Fnu4HI	GCNGC	3 cut(s)	217, 785, 1935
FokI	GGATG	6 cut(s)	14, 200, 832, 1090, 1673, 1775
FriOI	GRGCYC	2 cut(s)	355, 873
Fsp4HI	GCNGC	3 cut(s)	217, 785, 1935
FspBI	CTAG	7 cut(s)	278, 885, 897, 984, 1107, 1640, 1944
GlaI	GCGC	1 cut(s)	945
GluI	GCNGC	3 cut(s)	217, 785, 1935
GsaI	CCCAGC	2 cut(s)	317, 403
HaeIII	GGCC	7 cut(s)	219, 735, 1300, 1516, 1707, 1778, 1813
HapII	CCGG	3 cut(s)	849, 1381, 1721
HhaI	GCGC	1 cut(s)	946
Hin1II	CATG	8 cut(s)	453, 494, 1234, 1423, 1495, 1635, 1960, 1968
Hin6I	GCGC	1 cut(s)	944
HinP1I	GCGC	1 cut(s)	944
HincII	GTYRAC	1 cut(s)	1690
HindII	GTYRAC	1 cut(s)	1690
HindIII	AAGCTT	1 cut(s)	256
HinfI	GANTC	6 cut(s)	688, 1243, 1285, 1486, 1613, 1928
HpaI	GTTAAC	1 cut(s)	1690
HpaII	CCGG	3 cut(s)	849, 1381, 1721
HphI	GGTGA	2 cut(s)	523, 863
Hpy166II	GTNNAC	5 cut(s)	55, 305, 1378, 1563, 1690
Hpy188I	TCNGA	6 cut(s)	151, 297, 1135, 1284, 1546, 1555
Hpy188III	TCNNGA	5 cut(s)	83, 380, 802, 1095, 1292
Hpy8I	GTNNAC	5 cut(s)	55, 305, 1378, 1563, 1690
HpyAV	CCTTC	6 cut(s)	7, 319, 1245, 1460, 1660, 1824
HpyCH4III	ACNGT	5 cut(s)	470, 954, 1092, 1796, 1903
HpyCH4IV	ACGT	1 cut(s)	1764
HpyF10VI	GCNNNNNNNGC	8 cut(s)	500, 1112, 1433, 1766, 1775, 1846, 1873, 1953
HpyF3I	CTNAG	8 cut(s)	64, 413, 626, 656, 1171, 1247, 1283, 1310
HpySE526I	ACGT	1 cut(s)	1764
Hsp92II	CATG	8 cut(s)	453, 494, 1234, 1423, 1495, 1635, 1960, 1968
HspAI	GCGC	1 cut(s)	944
KpnI	GGTACC	1 cut(s)	671
KspAI	GTTAAC	1 cut(s)	1690
Kzo9I	GATC	8 cut(s)	45, 60, 79, 200, 637, 715, 798, 1717
LmnI	GCTCC	5 cut(s)	85, 475, 515, 759, 1412
Lsp1109I	GCAGC	2 cut(s)	771, 1921
LweI	GCATC	3 cut(s)	546, 1797, 1946
MaeI	CTAG	7 cut(s)	278, 885, 897, 984, 1107, 1640, 1944
MaeII	ACGT	1 cut(s)	1764
MaeIII	GTNAC	3 cut(s)	21, 416, 464
MalI	GATC	8 cut(s)	47, 62, 81, 202, 639, 717, 800, 1719
MboI	GATC	8 cut(s)	45, 60, 79, 200, 637, 715, 798, 1717
MflI	RGATCY	3 cut(s)	60, 637, 715
MhlI	GDGCHC	3 cut(s)	355, 756, 873
MlsI	TGGCCA	2 cut(s)	735, 1707
MluNI	TGGCCA	2 cut(s)	735, 1707
MlyI	GAGTC	3 cut(s)	1237, 1294, 1480
MmeI	TCCRAC	4 cut(s)	615, 1113, 1183, 1912
Mox20I	TGGCCA	2 cut(s)	735, 1707
MroXI	GAANNNNTTC	1 cut(s)	345
MscI	TGGCCA	2 cut(s)	735, 1707
MseI	TTAA	8 cut(s)	134, 207, 212, 609, 828, 948, 1038, 1689
MslI	CAYNNNNRTG	1 cut(s)	911
Msp20I	TGGCCA	2 cut(s)	735, 1707
MspA1I	CMGCKG	1 cut(s)	583
MspCI	CTTAAG	1 cut(s)	827
MspI	CCGG	3 cut(s)	849, 1381, 1721
MspR9I	CCNGG	4 cut(s)	713, 1382, 1657, 1709
Mva1269I	GAATGC	1 cut(s)	916
MvaI	CCWGG	3 cut(s)	713, 1657, 1709
MwoI	GCNNNNNNNGC	8 cut(s)	500, 1112, 1433, 1766, 1775, 1846, 1873, 1953
NciI	CCSGG	1 cut(s)	1382
NcoI	CCATGG	2 cut(s)	449, 1491
NdeI	CATATG	1 cut(s)	70
NdeII	GATC	8 cut(s)	45, 60, 79, 200, 637, 715, 798, 1717
NlaIII	CATG	8 cut(s)	453, 494, 1234, 1423, 1495, 1635, 1960, 1968
NlaIV	GGNNCC	3 cut(s)	307, 669, 1637
NmuCI	GTSAC	3 cut(s)	21, 416, 464
NspI	RCATGY	3 cut(s)	1234, 1423, 1960
NspV	TTCGAA	1 cut(s)	1263
PaqCI	CACCTGC	1 cut(s)	542
PceI	AGGCCT	1 cut(s)	1813
PctI	GAATGC	1 cut(s)	916
PdmI	GAANNNNTTC	1 cut(s)	345
PfeI	GAWTC	3 cut(s)	688, 1613, 1928
PkrI	GCNGC	3 cut(s)	218, 786, 1936
PleI	GAGTC	3 cut(s)	1237, 1293, 1480
PpsI	GAGTC	3 cut(s)	1237, 1293, 1480
PshBI	ATTAAT	1 cut(s)	207
PsiI	TTATAA	1 cut(s)	435
Psp124BI	GAGCTC	1 cut(s)	873
Psp1406I	AACGTT	1 cut(s)	1764
Psp6I	CCWGG	3 cut(s)	711, 1655, 1707
PspFI	CCCAGC	2 cut(s)	313, 399
PspGI	CCWGG	3 cut(s)	711, 1655, 1707
PspN4I	GGNNCC	3 cut(s)	307, 669, 1637
PspPI	GGNCC	2 cut(s)	122, 305
PstI	CTGCAG	1 cut(s)	161
PsuI	RGATCY	3 cut(s)	60, 637, 715
PvuII	CAGCTG	1 cut(s)	583
RsaI	GTAC	2 cut(s)	592, 669
RsaNI	GTAC	2 cut(s)	591, 668
RseI	CAYNNNNRTG	1 cut(s)	911
SacI	GAGCTC	1 cut(s)	873
SaqAI	TTAA	8 cut(s)	134, 207, 212, 609, 828, 948, 1038, 1689
SatI	GCNGC	3 cut(s)	217, 785, 1935
Sau3AI	GATC	8 cut(s)	45, 60, 79, 200, 637, 715, 798, 1717
Sau96I	GGNCC	2 cut(s)	122, 305
SchI	GAGTC	3 cut(s)	1237, 1294, 1480
ScrFI	CCNGG	4 cut(s)	713, 1382, 1657, 1709
SduI	GDGCHC	3 cut(s)	355, 756, 873
SfaNI	GCATC	3 cut(s)	546, 1797, 1946
SfcI	CTRYAG	2 cut(s)	51, 157
SfuI	TTCGAA	1 cut(s)	1263
SinI	GGWCC	2 cut(s)	122, 305
SmiMI	CAYNNNNRTG	1 cut(s)	911
SmlI	CTYRAG	3 cut(s)	827, 962, 1236
SmoI	CTYRAG	3 cut(s)	827, 962, 1236
SpeI	ACTAGT	1 cut(s)	983
SseBI	AGGCCT	1 cut(s)	1813
SsiI	CCGC	3 cut(s)	216, 1423, 1951
SspI	AATATT	5 cut(s)	266, 457, 508, 819, 1402
SspMI	CTAG	7 cut(s)	278, 885, 897, 984, 1107, 1640, 1944
SstI	GAGCTC	1 cut(s)	873
StuI	AGGCCT	1 cut(s)	1813
StyD4I	CCNGG	4 cut(s)	711, 1380, 1655, 1707
StyI	CCWWGG	3 cut(s)	449, 548, 1491
TaaI	ACNGT	5 cut(s)	470, 954, 1092, 1796, 1903
TaiI	ACGT	1 cut(s)	1767
TaqI	TCGA	6 cut(s)	203, 349, 1263, 1323, 1680, 1736
TaqII	GACCGA	1 cut(s)	110
TauI	GCSGC	1 cut(s)	219
TfiI	GAWTC	3 cut(s)	688, 1613, 1928
Tru1I	TTAA	8 cut(s)	134, 207, 212, 609, 828, 948, 1038, 1689
Tru9I	TTAA	8 cut(s)	134, 207, 212, 609, 828, 948, 1038, 1689
TscAI	CASTG	7 cut(s)	243, 421, 473, 736, 880, 1074, 1790
TseFI	GTSAC	3 cut(s)	21, 416, 464
TseI	GCWGC	2 cut(s)	784, 1934
Tsp45I	GTSAC	3 cut(s)	21, 416, 464
TspDTI	ATGAA	8 cut(s)	20, 363, 429, 479, 1094, 1215, 1239, 1755
TspRI	CASTG	7 cut(s)	243, 421, 473, 736, 880, 1074, 1790
Vha464I	CTTAAG	1 cut(s)	827
VpaK11BI	GGWCC	2 cut(s)	122, 305
VspI	ATTAAT	1 cut(s)	207
XapI	RAATTY	2 cut(s)	342, 674
XceI	RCATGY	3 cut(s)	1234, 1423, 1960
XmiI	GTMKAC	2 cut(s)	54, 1562
XmnI	GAANNNNTTC	1 cut(s)	345
XspI	CTAG	7 cut(s)	278, 885, 897, 984, 1107, 1640, 1944

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.