Rh4CG281100
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Reverse (-)
53872200 .. 53877279
5080 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG281100.1

Sequence Viewer

Length: 1491 bp
ATGGCTACTAGTAGTTTTAGTGAAGCCAATCTTTTGGGAAAAGGGGGATTTGCAAAGGTTTTTAAAGGAGTTTGGGAGAACACAGAAATTGCAGTGAAGAGGATGAACAAGATAGGGTCAGGAGTGGAGGCTAGTAATGCTTTAGATATGTTCAGGTCGGAGGTTGAATTGCTTTCCAAACTCCAACACAGAAACTTAGTTACACTCATTGGTTATTGCTGGAATGAAGATGAAAAGATTTTAGTTTATGAATATATGCCTCAGGGGACTCTTAAGAGGCATTTGTTCGAATGGCAACAAGAAAATCTGAGTCCTCTTGACTGGCCTATAAGACTGAGAATAGCTTTTGATGTCGCAAAAGGTGTTGATTATCTACATACTGCAACCAACCAAATACTTGTCCACCGGGACTTGAAACCTACAAATATTTTACTTGGAGCTAATATGCAGGCTAAAGTTGGAGATTTTGGATTAGTGTATTCCTTACCAGAAGGAAAAGACTACATTATGACGCCCATTGCAGGAACACAAGGCTATTGGCCTGAAGAATGTGTTGATGGAAAGATATCTGACACTTCAGATGTGTATACATTTGGAATACTTCTATTGGAACTCGTTAGTGGAAGAAAAGTAAATGATTCTGTCTTCTTGCCAACATGGTTCCAAGATACCCTAAATATCAGGGATGAGAAGGGGAAAATCATCGAGTATGTTAACAAGGCTAATCTTGACCAGGTTATTGATCCGGTAATAGATATATCGAATGAAACTCTGGTAGCTATTGCTAATGTTGCTGAATTGGCCTTGCACTGCATCCACCGTAAGTTTGATAGCAGGCCTTCCATTGCTCGTGTATTGGGTGTACTTACTCTGCTCATTGATAGCTGGAAGCCACCACAGCCTGAAGAAGTCCAACCGAGATTGACAGTAAAAGAAGCATTTAGGAGGATTGATTCGGCTGCATCAACTAGCAAGCGGTGCTTAGGAATGCATAATGTGATGTGGTTGTATGGTTGTTGTTTCTTTAAATATGCAACCTCAGAAGAAGCTGATAGTGCCATTAGAACTTTGCATAATCAACATACTCTTCCTGGGGGAGTAGGTCCTATCCAAGTCAGATATGCTGATGGGGAACGAGAACGCCTTGGCCTGGAGAATCAAGGGCCGGGACCTGCTTTTGGAGGTCCAGGTTTTGGTCATTGGTTTCAAAGCCCAGGGGTCAGACCAGTGCTTAACTTTGGTGATCCTACGAGTGATCAAATTCCAACTAATGCTTGGCATCTAATTAGTCCACCAAACTTGGTGCCATCCCCCAATCCTGGTATTTGTGGTTTTGGGACCCATTTGCTTTCTAGGTCTGGAGACATGGGACGCTTTAATTTGGGTGGGCTTGGCAGCTCTGTAGAGGGTCCTCATTCTGTGATGGCAGTTTCATCTCAAACAAAGTGCAGGTATGGATTACTGGAGTTTATCTCAAGTAGCATGTTTTGA

Protein Analysis

496

Amino Acids

54.98

Weight (kDa)

6.03

Isoelectric Point (pI)

41.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 8 - 285 6e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 10 - 285 4.6e-40 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1180, 1440
AccB1I GGYRCC 1 cut(s) 1303
AccB7I CCANNNNNTGG 1 cut(s) 1193
AccI GTMKAC 1 cut(s) 587
AciI CCGC 1 cut(s) 976
AclWI GGATC 2 cut(s) 737, 1238
AcsI RAATTY 1 cut(s) 1260
AcuI CTGAAG 3 cut(s) 561, 564, 924
AcyI GRCGYC 1 cut(s) 512
AfaI GTAC 1 cut(s) 864
AfiI CCNNNNNNNGG 5 cut(s) 521, 1150, 1178, 1193, 1319
AflII CTTAAG 1 cut(s) 272
AgsI TTSAA 3 cut(s) 167, 415, 1208
AhlI ACTAGT 1 cut(s) 8
AjnI CCWGG 6 cut(s) 732, 1090, 1149, 1186, 1213, 1318
AluBI AGCT 6 cut(s) 344, 440, 779, 885, 1049, 1398
AluI AGCT 6 cut(s) 344, 440, 779, 885, 1049, 1398
Alw26I GTCTC 1 cut(s) 1356
AlwI GGATC 2 cut(s) 737, 1238
AoxI GGCC 6 cut(s) 323, 539, 801, 836, 1147, 1163
ApeKI GCWGC 2 cut(s) 959, 1395
ApoI RAATTY 1 cut(s) 1260
AspS9I GGNCC 6 cut(s) 1103, 1163, 1169, 1184, 1338, 1409
AsuC2I CCSGG 2 cut(s) 407, 1167
AsuHPI GGTGA 1 cut(s) 1253
AsuII TTCGAA 1 cut(s) 288
AvaII GGWCC 5 cut(s) 1103, 1169, 1184, 1338, 1409
AxyI CCTNAGG 1 cut(s) 261
BanI GGYRCC 1 cut(s) 1303
BauI CACGAG 1 cut(s) 849
BbsI GAAGAC 1 cut(s) 637
BbvI GCAGC 2 cut(s) 946, 1407
BccI CCATC 4 cut(s) 551, 1121, 1315, 1417
BciT130I CCWGG 6 cut(s) 734, 1092, 1151, 1188, 1215, 1320
BclI TGATCA 1 cut(s) 1255
BcnI CCSGG 2 cut(s) 407, 1167
BcoDI GTCTC 1 cut(s) 1356
BcuI ACTAGT 1 cut(s) 8
BfaI CTAG 4 cut(s) 9, 132, 969, 1353
BfmI CTRYAG 1 cut(s) 1401
BfrI CTTAAG 1 cut(s) 272
BfuAI ACCTGC 2 cut(s) 1180, 1440
BisI GCNGC 2 cut(s) 960, 1396
BlsI GCNGC 2 cut(s) 961, 1397
Bme1390I CCNGG 8 cut(s) 407, 734, 1092, 1151, 1167, 1188, 1215, 1320
Bme18I GGWCC 5 cut(s) 1103, 1169, 1184, 1338, 1409
BmgT120I GGNCC 6 cut(s) 1103, 1163, 1169, 1184, 1338, 1409
BmiI GGNNCC 6 cut(s) 662, 1170, 1305, 1339, 1340, 1410
BmrFI CCNGG 8 cut(s) 407, 734, 1092, 1151, 1167, 1188, 1215, 1320
BmsI GCATC 3 cut(s) 822, 971, 1288
BpiI GAAGAC 1 cut(s) 637
BplI GAGNNNNNCTC 2 cut(s) 1457, 1489
BpmI CTGGAG 3 cut(s) 1172, 1380, 1484
Bpu10I CCTNAGC 1 cut(s) 982
Bpu14I TTCGAA 1 cut(s) 288
BpuEI CTTGAG 1 cut(s) 1459
BpuMI CCSGG 2 cut(s) 407, 1167
BsaHI GRCGYC 1 cut(s) 512
BsaJI CCNNGG 4 cut(s) 1091, 1144, 1213, 1214
BsaWI WCCGGW 1 cut(s) 745
Bsc4I CCNNNNNNNGG 5 cut(s) 521, 1150, 1178, 1193, 1319
Bse1I ACTGG 3 cut(s) 326, 1226, 1467
Bse21I CCTNAGG 1 cut(s) 261
Bse3DI GCAATG 2 cut(s) 516, 843
BseBI CCWGG 6 cut(s) 734, 1092, 1151, 1188, 1215, 1320
BseDI CCNNGG 4 cut(s) 1091, 1144, 1213, 1214
BseGI GGATG 4 cut(s) 108, 691, 813, 1307
BseLI CCNNNNNNNGG 5 cut(s) 521, 1150, 1178, 1193, 1319
BseMI GCAATG 2 cut(s) 516, 843
BseMII CTCAG 4 cut(s) 275, 299, 326, 1053
BseNI ACTGG 3 cut(s) 326, 1226, 1467
BseXI GCAGC 2 cut(s) 946, 1407
BsgI GTGCAG 1 cut(s) 1468
BshFI GGCC 6 cut(s) 325, 541, 803, 838, 1149, 1165
BshNI GGYRCC 1 cut(s) 1303
BsiSI CCGG 3 cut(s) 406, 746, 1166
BslFI GGGAC 5 cut(s) 280, 422, 1182, 1351, 1383
BslI CCNNNNNNNGG 5 cut(s) 521, 1150, 1178, 1193, 1319
BsmAI GTCTC 1 cut(s) 1356
BsmFI GGGAC 5 cut(s) 280, 422, 1182, 1351, 1383
BsmI GAATGC 1 cut(s) 993
BsnI GGCC 6 cut(s) 325, 541, 803, 838, 1149, 1165
Bsp119I TTCGAA 1 cut(s) 288
Bsp143I GATC 3 cut(s) 742, 1243, 1255
BspACI CCGC 1 cut(s) 976
BspANI GGCC 6 cut(s) 325, 541, 803, 838, 1149, 1165
BspCNI CTCAG 4 cut(s) 274, 300, 327, 1052
BspLI GGNNCC 6 cut(s) 662, 1170, 1305, 1339, 1340, 1410
BspMI ACCTGC 2 cut(s) 1180, 1440
BspPI GGATC 2 cut(s) 737, 1238
BspT104I TTCGAA 1 cut(s) 288
BspT107I GGYRCC 1 cut(s) 1303
BspTI CTTAAG 1 cut(s) 272
BsrDI GCAATG 2 cut(s) 516, 843
BsrI ACTGG 3 cut(s) 326, 1226, 1467
BssECI CCNNGG 4 cut(s) 1091, 1144, 1213, 1214
BssMI GATC 3 cut(s) 742, 1243, 1255
BssNAI GTATAC 1 cut(s) 588
BssNI GRCGYC 1 cut(s) 512
BssSI CACGAG 1 cut(s) 849
BssT1I CCWWGG 1 cut(s) 1144
Bst1107I GTATAC 1 cut(s) 588
Bst2BI CACGAG 1 cut(s) 849
Bst2UI CCWGG 6 cut(s) 734, 1092, 1151, 1188, 1215, 1320
Bst4CI ACNGT 2 cut(s) 821, 928
Bst6I CTCTTC 2 cut(s) 92, 1092
BstACI GRCGYC 1 cut(s) 512
BstAFI CTTAAG 1 cut(s) 272
BstAPI GCANNNNNTGC 1 cut(s) 978
BstBI TTCGAA 1 cut(s) 288
BstC8I GCNNGC 3 cut(s) 450, 836, 974
BstDEI CTNAG 6 cut(s) 196, 261, 308, 335, 982, 1039
BstF5I GGATG 4 cut(s) 108, 691, 813, 1307
BstKTI GATC 3 cut(s) 745, 1246, 1258
BstMAI GTCTC 1 cut(s) 1356
BstMBI GATC 3 cut(s) 742, 1243, 1255
BstMWI GCNNNNNNNGC 6 cut(s) 137, 791, 800, 898, 978, 1055
BstNI CCWGG 6 cut(s) 734, 1092, 1151, 1188, 1215, 1320
BstNSI RCATGY 1 cut(s) 1486
BstSCI CCNGG 8 cut(s) 405, 732, 1090, 1149, 1165, 1186, 1213, 1318
BstSFI CTRYAG 1 cut(s) 1401
BstV1I GCAGC 2 cut(s) 946, 1407
BstV2I GAAGAC 1 cut(s) 637
BstXI CCANNNNNNTGG 1 cut(s) 34
BstZ17I GTATAC 1 cut(s) 588
Bsu36I CCTNAGG 1 cut(s) 261
BsuRI GGCC 6 cut(s) 325, 541, 803, 838, 1149, 1165
BtsCI GGATG 4 cut(s) 108, 691, 813, 1307
BtsI GCAGTG 2 cut(s) 99, 808
BtsIMutI CAGTG 3 cut(s) 99, 808, 1233
BveI ACCTGC 2 cut(s) 1180, 1440
Cac8I GCNNGC 3 cut(s) 450, 836, 974
Cfr13I GGNCC 6 cut(s) 1103, 1163, 1169, 1184, 1338, 1409
CseI GACGC 2 cut(s) 520, 1380
CsiI ACCWGGT 1 cut(s) 732
Csp6I GTAC 1 cut(s) 863
CspCI CAANNNNNGTGG 2 cut(s) 1281, 1316
CviAII CATG 3 cut(s) 657, 1366, 1483
CviQI GTAC 1 cut(s) 863
DdeI CTNAG 6 cut(s) 196, 261, 308, 335, 982, 1039
DpnI GATC 3 cut(s) 744, 1245, 1257
DpnII GATC 3 cut(s) 742, 1243, 1255
DraI TTTAAA 2 cut(s) 64, 1027
Eam1104I CTCTTC 2 cut(s) 92, 1092
EarI CTCTTC 2 cut(s) 92, 1092
Eco130I CCWWGG 1 cut(s) 1144
Eco147I AGGCCT 1 cut(s) 838
Eco32I GATATC 1 cut(s) 567
Eco47I GGWCC 5 cut(s) 1103, 1169, 1184, 1338, 1409
Eco57I CTGAAG 3 cut(s) 561, 564, 924
Eco81I CCTNAGG 1 cut(s) 261
EcoO109I RGGNCCY 4 cut(s) 1103, 1169, 1338, 1409
EcoRII CCWGG 6 cut(s) 732, 1090, 1149, 1186, 1213, 1318
EcoRV GATATC 1 cut(s) 567
EcoT14I CCWWGG 1 cut(s) 1144
EcoT22I ATGCAT 1 cut(s) 993
ErhI CCWWGG 1 cut(s) 1144
FaeI CATG 3 cut(s) 660, 1369, 1486
FalI AAGNNNNNCTT 4 cut(s) 15, 47, 965, 997
FaqI GGGAC 5 cut(s) 280, 422, 1182, 1351, 1383
FatI CATG 3 cut(s) 656, 1365, 1482
FbaI TGATCA 1 cut(s) 1255
FblI GTMKAC 1 cut(s) 587
Fnu4HI GCNGC 2 cut(s) 960, 1396
FokI GGATG 4 cut(s) 115, 698, 800, 1294
Fsp4HI GCNGC 2 cut(s) 960, 1396
FspBI CTAG 4 cut(s) 9, 132, 969, 1353
GluI GCNGC 2 cut(s) 960, 1396
GsuI CTGGAG 3 cut(s) 1172, 1380, 1484
HaeIII GGCC 6 cut(s) 325, 541, 803, 838, 1149, 1165
HapII CCGG 3 cut(s) 406, 746, 1166
HgaI GACGC 2 cut(s) 520, 1380
Hin1I GRCGYC 1 cut(s) 512
Hin1II CATG 3 cut(s) 660, 1369, 1486
HincII GTYRAC 1 cut(s) 715
HindII GTYRAC 1 cut(s) 715
HinfI GANTC 5 cut(s) 268, 310, 638, 953, 1156
HpaI GTTAAC 1 cut(s) 715
HpaII CCGG 3 cut(s) 406, 746, 1166
HphI GGTGA 1 cut(s) 1253
Hpy166II GTNNAC 5 cut(s) 403, 588, 715, 863, 1292
Hpy188I TCNGA 7 cut(s) 160, 309, 571, 580, 1042, 1118, 1223
Hpy188III TCNNGA 4 cut(s) 120, 317, 728, 1359
Hpy8I GTNNAC 5 cut(s) 403, 588, 715, 863, 1292
HpyAV CCTTC 3 cut(s) 485, 685, 849
HpyCH4III ACNGT 2 cut(s) 821, 928
HpyF10VI GCNNNNNNNGC 6 cut(s) 137, 791, 800, 898, 978, 1055
HpyF3I CTNAG 6 cut(s) 196, 261, 308, 335, 982, 1039
Hsp92I GRCGYC 1 cut(s) 512
Hsp92II CATG 3 cut(s) 660, 1369, 1486
KflI GGGWCCC 1 cut(s) 1338
Ksp22I TGATCA 1 cut(s) 1255
KspAI GTTAAC 1 cut(s) 715
Kzo9I GATC 3 cut(s) 742, 1243, 1255
LmnI GCTCC 1 cut(s) 437
Lsp1109I GCAGC 2 cut(s) 946, 1407
LweI GCATC 3 cut(s) 822, 971, 1288
MabI ACCWGGT 1 cut(s) 732
MaeI CTAG 4 cut(s) 9, 132, 969, 1353
MaeIII GTNAC 1 cut(s) 199
MalI GATC 3 cut(s) 744, 1245, 1257
MboI GATC 3 cut(s) 742, 1243, 1255
MboII GAAGA 8 cut(s) 109, 239, 557, 636, 637, 917, 1055, 1079
MluCI AATT 6 cut(s) 87, 167, 797, 1260, 1284, 1378
MlyI GAGTC 2 cut(s) 262, 319
MmeI TCCRAC 5 cut(s) 138, 208, 439, 937, 1289
Mph1103I ATGCAT 1 cut(s) 993
MseI TTAA 6 cut(s) 63, 273, 714, 1026, 1233, 1377
MspCI CTTAAG 1 cut(s) 272
MspI CCGG 3 cut(s) 406, 746, 1166
MspR9I CCNGG 8 cut(s) 407, 734, 1092, 1151, 1167, 1188, 1215, 1320
Mva1269I GAATGC 1 cut(s) 993
MvaI CCWGG 6 cut(s) 734, 1092, 1151, 1188, 1215, 1320
MwoI GCNNNNNNNGC 6 cut(s) 137, 791, 800, 898, 978, 1055
NciI CCSGG 2 cut(s) 407, 1167
NdeII GATC 3 cut(s) 742, 1243, 1255
NlaIII CATG 3 cut(s) 660, 1369, 1486
NlaIV GGNNCC 6 cut(s) 662, 1170, 1305, 1339, 1340, 1410
NsiI ATGCAT 1 cut(s) 993
NspI RCATGY 1 cut(s) 1486
NspV TTCGAA 1 cut(s) 288
PasI CCCWGGG 1 cut(s) 1214
PceI AGGCCT 1 cut(s) 838
PctI GAATGC 1 cut(s) 993
PfeI GAWTC 3 cut(s) 638, 953, 1156
PflMI CCANNNNNTGG 1 cut(s) 1193
PkrI GCNGC 2 cut(s) 961, 1397
PleI GAGTC 2 cut(s) 262, 318
PpsI GAGTC 2 cut(s) 262, 318
PpuMI RGGWCCY 4 cut(s) 1103, 1169, 1338, 1409
Psp5II RGGWCCY 4 cut(s) 1103, 1169, 1338, 1409
Psp6I CCWGG 6 cut(s) 732, 1090, 1149, 1186, 1213, 1318
PspGI CCWGG 6 cut(s) 732, 1090, 1149, 1186, 1213, 1318
PspN4I GGNNCC 6 cut(s) 662, 1170, 1305, 1339, 1340, 1410
PspPI GGNCC 6 cut(s) 1103, 1163, 1169, 1184, 1338, 1409
PspPPI RGGWCCY 4 cut(s) 1103, 1169, 1338, 1409
RsaI GTAC 1 cut(s) 864
RsaNI GTAC 1 cut(s) 863
SaqAI TTAA 6 cut(s) 63, 273, 714, 1026, 1233, 1377
SatI GCNGC 2 cut(s) 960, 1396
Sau3AI GATC 3 cut(s) 742, 1243, 1255
Sau96I GGNCC 6 cut(s) 1103, 1163, 1169, 1184, 1338, 1409
SchI GAGTC 2 cut(s) 262, 319
ScrFI CCNGG 8 cut(s) 407, 734, 1092, 1151, 1167, 1188, 1215, 1320
SexAI ACCWGGT 1 cut(s) 732
SfaNI GCATC 3 cut(s) 822, 971, 1288
SfcI CTRYAG 1 cut(s) 1401
SfuI TTCGAA 1 cut(s) 288
SinI GGWCC 5 cut(s) 1103, 1169, 1184, 1338, 1409
SmlI CTYRAG 2 cut(s) 272, 1474
SmoI CTYRAG 2 cut(s) 272, 1474
SpeI ACTAGT 1 cut(s) 8
Sse9I AATT 6 cut(s) 87, 167, 797, 1260, 1284, 1378
SseBI AGGCCT 1 cut(s) 838
SsiI CCGC 1 cut(s) 976
SspI AATATT 1 cut(s) 427
SspMI CTAG 4 cut(s) 9, 132, 969, 1353
StuI AGGCCT 1 cut(s) 838
StyD4I CCNGG 8 cut(s) 405, 732, 1090, 1149, 1165, 1186, 1213, 1318
StyI CCWWGG 1 cut(s) 1144
TaaI ACNGT 2 cut(s) 821, 928
TaqI TCGA 3 cut(s) 288, 705, 761
TasI AATT 6 cut(s) 87, 167, 797, 1260, 1284, 1378
TatI WGTACW 1 cut(s) 862
TfiI GAWTC 3 cut(s) 638, 953, 1156
Tru1I TTAA 6 cut(s) 63, 273, 714, 1026, 1233, 1377
Tru9I TTAA 6 cut(s) 63, 273, 714, 1026, 1233, 1377
TscAI CASTG 3 cut(s) 99, 815, 1233
TseI GCWGC 2 cut(s) 959, 1395
TspDTI ATGAA 6 cut(s) 119, 240, 246, 264, 780, 1422
TspRI CASTG 3 cut(s) 99, 815, 1233
Van91I CCANNNNNTGG 1 cut(s) 1193
Vha464I CTTAAG 1 cut(s) 272
VpaK11BI GGWCC 5 cut(s) 1103, 1169, 1184, 1338, 1409
XapI RAATTY 1 cut(s) 1260
XceI RCATGY 1 cut(s) 1486
XcmI CCANNNNNNNNNTGG 1 cut(s) 1272
XmiI GTMKAC 1 cut(s) 587
XspI CTAG 4 cut(s) 9, 132, 969, 1353
Zsp2I ATGCAT 1 cut(s) 993
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.