Rmu_sc0034092.1_g000001
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0034092.1
Physical Location & Seq
Reverse (-)
2 .. 1568
1567 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0034092.1_g000001.1.cds

Sequence Viewer

Length: 1567 bp
atggaagctttccgaaatagtttaggtcctaacactctgggatggtccggctccgattactgtaattggaccggggtaatttgtaacgaggacaatagggtctcgttcattactatccgcaaaaagaacctaactggttcgatcccagcttctatcggaaatatcaagtatcttaagatatttgatgtttccgagaatcaattaactggcccccttccgagatttcgtgatttgccattattggagcggcttttagccaacaacaataatttcacttcaatcccagtagatttcttctcatccgatttacccaccttgttttctattgatattagtcacaacccctttgcaccttggcgcattctaggcgctgctagggagctaacgtttttttcggccacgaacgccaatattataggaaacctggacgcctttagccgcatcaactttcctagtttggtgaatttagacctttcttacaaccatgtcactggcactgtaccatatgaattcacacaactgcctcaacttaagtacttagatttatcgaacaatttacttagtggtaaagtacccgagtttagggcaaatgttactgtgaggttagagggtaactctgtcatgtcatcgagttccactagaaagatgagtgctagggtgcttgttgtagttctgattggggctacaactggactagtgcttgtactaggactttttgttttcttctttaagaggaaaccctgtgttgtccaactcgaggcttctaacactcgatctattgctccaggcgatattgatgttcctgctatggataggattagtatttcagttgatgtagtgaggcacgcgaccaacaatttcagccgagagaatttattaggggaagggggtttttctagtgtttttagagcggaaatagataggaaaatagttgcagtgaaaatgataggtagaataaaattcggtagggtagctgatgaggcaataaggtcgtttgagcgtgaggttcacgtcctcaccaaagtgcgacataccaacttggttgcacttctaggatactgttgggactcagaaattatgatactggtctacgactacatggctcaagggaatcttggaaggcatctttttcactggagagatgaagggctccaaccccttgcttggaccacaagactcaatattgcctatgatgttgcaagaggggttgaatatctccaccagtttgcgaaccagacatttgttcacagagacttaaagccttccaacattttactcacagacgatttgcatgccaaagtagctgactttggactggttcgccctcttagatactgtaatgccacaactgataccacccaaccaggaggaaccgccggttacaaggctccggaatatgctttatatagacaaatatctgccaaggcagatgtgttcagtttcggagtcatcttactggagttgaccaccggtaagagggcagttgataaaagcttccctgagtcagatccacacctaccaacttggttctccaaccaagtcatcaacaagggcaagggcggcattg

Protein Analysis

522

Amino Acids

58.28

Weight (kDa)

8.92

Isoelectric Point (pI)

28.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 98
AccBSI CCGCTC 2 cut(s) 247, 911
AccI GTMKAC 1 cut(s) 1089
AccII CGCG 1 cut(s) 848
AccIII TCCGGA 1 cut(s) 1390
AciI CCGC 6 cut(s) 118, 247, 439, 911, 1374, 1560
AclI AACGTT 1 cut(s) 386
AclWI GGATC 2 cut(s) 136, 1502
AcoI YGGCCR 1 cut(s) 396
AcsI RAATTY 4 cut(s) 463, 509, 871, 959
AcyI GRCGYC 1 cut(s) 429
AfaI GTAC 4 cut(s) 501, 536, 573, 705
AfiI CCNNNNNNNGG 4 cut(s) 582, 757, 1164, 1476
AflII CTTAAG 2 cut(s) 173, 530
AgeI ACCGGT 1 cut(s) 1469
AgsI TTSAA 2 cut(s) 279, 1211
AhlI ACTAGT 1 cut(s) 694
AjiI CACGTC 1 cut(s) 1012
AjnI CCWGG 3 cut(s) 423, 784, 1363
AleI CACNNNNGTG 1 cut(s) 1022
AluBI AGCT 6 cut(s) 8, 149, 382, 974, 1304, 1494
AluI AGCT 6 cut(s) 8, 149, 382, 974, 1304, 1494
Alw26I GTCTC 2 cut(s) 106, 1245
AlwI GGATC 2 cut(s) 136, 1502
Ama87I CYCGRG 2 cut(s) 575, 755
Aor13HI TCCGGA 1 cut(s) 1390
AoxI GGCC 2 cut(s) 208, 396
ApeKI GCWGC 1 cut(s) 371
ApoI RAATTY 4 cut(s) 463, 509, 871, 959
AsiGI ACCGGT 1 cut(s) 1469
AspLEI GCGC 2 cut(s) 360, 371
AspS9I GGNCC 5 cut(s) 26, 45, 69, 209, 1167
AsuC2I CCSGG 1 cut(s) 73
AsuHPI GGTGA 2 cut(s) 472, 1009
AvaI CYCGRG 2 cut(s) 575, 755
AvaII GGWCC 4 cut(s) 26, 45, 69, 1167
BanII GRGCYC 1 cut(s) 1152
BbvI GCAGC 1 cut(s) 358
BccI CCATC 1 cut(s) 36
BcgI CGANNNNNNTGC 4 cut(s) 972, 1006, 1274, 1308
BciT130I CCWGG 3 cut(s) 425, 786, 1365
BciVI GTATCC 1 cut(s) 1049
BcnI CCSGG 1 cut(s) 73
BcoDI GTCTC 2 cut(s) 106, 1245
BcuI ACTAGT 1 cut(s) 694
BfaI CTAG 9 cut(s) 365, 375, 453, 639, 654, 695, 707, 897, 1052
BfoI RGCGCY 1 cut(s) 372
BfrI CTTAAG 2 cut(s) 173, 530
BfuI GTATCC 1 cut(s) 1049
BisI GCNGC 4 cut(s) 248, 372, 439, 1561
BlsI GCNGC 4 cut(s) 249, 373, 440, 1562
BmcAI AGTACT 1 cut(s) 536
Bme1390I CCNGG 4 cut(s) 73, 425, 786, 1365
Bme18I GGWCC 4 cut(s) 26, 45, 69, 1167
BmeT110I CYCGRG 2 cut(s) 575, 755
BmgBI CACGTC 1 cut(s) 1012
BmgT120I GGNCC 5 cut(s) 26, 45, 69, 209, 1167
BmiI GGNNCC 5 cut(s) 52, 211, 1151, 1372, 1389
BmrFI CCNGG 4 cut(s) 73, 425, 786, 1365
BmrI ACTGGG 1 cut(s) 278
BmsI GCATC 2 cut(s) 450, 1132
BmuI ACTGGG 1 cut(s) 278
BplI GAGNNNNNCTC 2 cut(s) 599, 631
BpmI CTGGAG 3 cut(s) 768, 1156, 1478
BpuEI CTTGAG 1 cut(s) 1089
BpuMI CCSGG 1 cut(s) 73
BsaHI GRCGYC 1 cut(s) 429
BsaI GGTCTC 1 cut(s) 106
BsaJI CCNNGG 3 cut(s) 72, 353, 1422
BsaWI WCCGGW 2 cut(s) 1390, 1469
BsaXI ACNNNNNCTCC 2 cut(s) 371, 401
Bsc4I CCNNNNNNNGG 4 cut(s) 582, 757, 1164, 1476
Bse118I RCCGGY 2 cut(s) 1376, 1469
BseAI TCCGGA 1 cut(s) 1390
BseBI CCWGG 3 cut(s) 425, 786, 1365
BseDI CCNNGG 3 cut(s) 72, 353, 1422
BseGI GGATG 2 cut(s) 47, 299
BseLI CCNNNNNNNGG 4 cut(s) 582, 757, 1164, 1476
BseMII CTCAG 2 cut(s) 1083, 1491
BseXI GCAGC 1 cut(s) 358
BseYI CCCAGC 1 cut(s) 145
Bsh1236I CGCG 1 cut(s) 848
BshFI GGCC 2 cut(s) 210, 398
BshTI ACCGGT 1 cut(s) 1469
BsiHKCI CYCGRG 2 cut(s) 575, 755
BsiSI CCGG 5 cut(s) 48, 72, 1377, 1391, 1470
BslFI GGGAC 1 cut(s) 1079
BslI CCNNNNNNNGG 4 cut(s) 582, 757, 1164, 1476
BsmAI GTCTC 2 cut(s) 106, 1245
BsmFI GGGAC 1 cut(s) 1079
BsmI GAATGC 1 cut(s) 360
BsnI GGCC 2 cut(s) 210, 398
Bso31I GGTCTC 1 cut(s) 106
BsoBI CYCGRG 2 cut(s) 575, 755
Bsp1286I GDGCHC 1 cut(s) 1152
Bsp13I TCCGGA 1 cut(s) 1390
Bsp143I GATC 3 cut(s) 141, 773, 1507
BspACI CCGC 6 cut(s) 118, 247, 439, 911, 1374, 1560
BspANI GGCC 2 cut(s) 210, 398
BspCNI CTCAG 2 cut(s) 1082, 1492
BspEI TCCGGA 1 cut(s) 1390
BspFNI CGCG 1 cut(s) 848
BspLI GGNNCC 5 cut(s) 52, 211, 1151, 1372, 1389
BspPI GGATC 2 cut(s) 136, 1502
BspTI CTTAAG 2 cut(s) 173, 530
BspTNI GGTCTC 1 cut(s) 106
BsrBI CCGCTC 2 cut(s) 247, 911
BsrFI RCCGGY 2 cut(s) 1376, 1469
BssAI RCCGGY 2 cut(s) 1376, 1469
BssECI CCNNGG 3 cut(s) 72, 353, 1422
BssMI GATC 3 cut(s) 141, 773, 1507
BssNI GRCGYC 1 cut(s) 429
BssT1I CCWWGG 2 cut(s) 353, 1422
Bst2UI CCWGG 3 cut(s) 425, 786, 1365
Bst4CI ACNGT 5 cut(s) 62, 499, 598, 1061, 1337
BstACI GRCGYC 1 cut(s) 429
BstAFI CTTAAG 2 cut(s) 173, 530
BstC8I GCNNGC 2 cut(s) 846, 1293
BstDEI CTNAG 5 cut(s) 538, 560, 1069, 1328, 1500
BstF5I GGATG 2 cut(s) 47, 299
BstFNI CGCG 1 cut(s) 848
BstH2I RGCGCY 1 cut(s) 372
BstHHI GCGC 2 cut(s) 360, 371
BstKTI GATC 3 cut(s) 144, 776, 1510
BstMAI GTCTC 2 cut(s) 106, 1245
BstMBI GATC 3 cut(s) 141, 773, 1507
BstMWI GCNNNNNNNGC 5 cut(s) 366, 404, 980, 1301, 1560
BstNI CCWGG 3 cut(s) 425, 786, 1365
BstNSI RCATGY 1 cut(s) 1295
BstSCI CCNGG 4 cut(s) 71, 423, 784, 1363
BstUI CGCG 1 cut(s) 848
BstV1I GCAGC 1 cut(s) 358
BstX2I RGATCY 1 cut(s) 1507
BstXI CCANNNNNNTGG 1 cut(s) 491
BstYI RGATCY 1 cut(s) 1507
BsuI GTATCC 1 cut(s) 1049
BsuRI GGCC 2 cut(s) 210, 398
BtrI CACGTC 1 cut(s) 1012
BtsCI GGATG 2 cut(s) 47, 299
BtsI GCAGTG 1 cut(s) 942
BtsIMutI CAGTG 4 cut(s) 489, 495, 942, 1132
Cac8I GCNNGC 2 cut(s) 846, 1293
CfoI GCGC 2 cut(s) 360, 371
Cfr10I RCCGGY 2 cut(s) 1376, 1469
Cfr13I GGNCC 5 cut(s) 26, 45, 69, 209, 1167
CseI GACGC 1 cut(s) 437
Csp6I GTAC 4 cut(s) 500, 535, 572, 704
CspAI ACCGGT 1 cut(s) 1469
CviAII CATG 4 cut(s) 485, 622, 1099, 1292
CviQI GTAC 4 cut(s) 500, 535, 572, 704
DdeI CTNAG 5 cut(s) 538, 560, 1069, 1328, 1500
DpnI GATC 3 cut(s) 143, 775, 1509
DpnII GATC 3 cut(s) 141, 773, 1507
DrdI GACNNNNNNGTC 1 cut(s) 98
DseDI GACNNNNNNGTC 1 cut(s) 98
EaeI YGGCCR 1 cut(s) 396
Eco130I CCWWGG 2 cut(s) 353, 1422
Eco24I GRGCYC 1 cut(s) 1152
Eco31I GGTCTC 1 cut(s) 106
Eco47I GGWCC 4 cut(s) 26, 45, 69, 1167
Eco88I CYCGRG 2 cut(s) 575, 755
EcoO109I RGGNCCY 1 cut(s) 26
EcoRI GAATTC 1 cut(s) 509
EcoRII CCWGG 3 cut(s) 423, 784, 1363
EcoT14I CCWWGG 2 cut(s) 353, 1422
EcoT38I GRGCYC 1 cut(s) 1152
ErhI CCWWGG 2 cut(s) 353, 1422
FaeI CATG 4 cut(s) 488, 625, 1102, 1295
FalI AAGNNNNNCTT 2 cut(s) 1098, 1130
FaqI GGGAC 1 cut(s) 1079
FatI CATG 4 cut(s) 484, 621, 1098, 1291
FauNDI CATATG 1 cut(s) 505
FblI GTMKAC 1 cut(s) 1089
Fnu4HI GCNGC 4 cut(s) 248, 372, 439, 1561
FokI GGATG 2 cut(s) 54, 286
FriOI GRGCYC 1 cut(s) 1152
Fsp4HI GCNGC 4 cut(s) 248, 372, 439, 1561
FspBI CTAG 9 cut(s) 365, 375, 453, 639, 654, 695, 707, 897, 1052
GlaI GCGC 2 cut(s) 359, 370
GluI GCNGC 4 cut(s) 248, 372, 439, 1561
GsaI CCCAGC 1 cut(s) 149
GsuI CTGGAG 3 cut(s) 768, 1156, 1478
HaeII RGCGCY 1 cut(s) 372
HaeIII GGCC 2 cut(s) 210, 398
HapII CCGG 5 cut(s) 48, 72, 1377, 1391, 1470
HgaI GACGC 1 cut(s) 437
HhaI GCGC 2 cut(s) 360, 371
Hin1I GRCGYC 1 cut(s) 429
Hin1II CATG 4 cut(s) 488, 625, 1102, 1295
Hin6I GCGC 2 cut(s) 358, 369
HinP1I GCGC 2 cut(s) 358, 369
HincII GTYRAC 1 cut(s) 1464
HindII GTYRAC 1 cut(s) 1464
HindIII AAGCTT 2 cut(s) 6, 1492
HinfI GANTC 6 cut(s) 196, 1067, 1111, 1176, 1446, 1502
HpaII CCGG 5 cut(s) 48, 72, 1377, 1391, 1470
HphI GGTGA 2 cut(s) 472, 1009
Hpy166II GTNNAC 4 cut(s) 1009, 1090, 1246, 1464
Hpy188III TCNNGA 2 cut(s) 227, 1391
Hpy8I GTNNAC 4 cut(s) 1009, 1090, 1246, 1464
HpyAV CCTTC 5 cut(s) 224, 878, 1113, 1139, 1272
HpyCH4III ACNGT 5 cut(s) 62, 499, 598, 1061, 1337
HpyCH4IV ACGT 2 cut(s) 386, 1011
HpyCH4V TGCA 5 cut(s) 350, 935, 1046, 1199, 1291
HpyF10VI GCNNNNNNNGC 5 cut(s) 366, 404, 980, 1301, 1560
HpyF3I CTNAG 5 cut(s) 538, 560, 1069, 1328, 1500
HpySE526I ACGT 2 cut(s) 386, 1011
Hsp92I GRCGYC 1 cut(s) 429
Hsp92II CATG 4 cut(s) 488, 625, 1102, 1295
HspAI GCGC 2 cut(s) 358, 369
Kpn2I TCCGGA 1 cut(s) 1390
Kzo9I GATC 3 cut(s) 141, 773, 1507
LmnI GCTCC 6 cut(s) 56, 244, 379, 787, 1155, 1393
Lsp1109I GCAGC 1 cut(s) 358
LweI GCATC 2 cut(s) 450, 1132
MaeI CTAG 9 cut(s) 365, 375, 453, 639, 654, 695, 707, 897, 1052
MaeII ACGT 2 cut(s) 386, 1011
MaeIII GTNAC 6 cut(s) 83, 335, 487, 592, 611, 1379
MalI GATC 3 cut(s) 143, 775, 1509
MbiI CCGCTC 2 cut(s) 247, 911
MboI GATC 3 cut(s) 141, 773, 1507
MboII GAAGA 2 cut(s) 286, 715
MflI RGATCY 1 cut(s) 1507
MhlI GDGCHC 1 cut(s) 1152
MlyI GAGTC 4 cut(s) 1061, 1170, 1455, 1511
MmeI TCCRAC 4 cut(s) 775, 1177, 1290, 1557
MroI TCCGGA 1 cut(s) 1390
MseI TTAA 5 cut(s) 174, 203, 531, 729, 1256
MslI CAYNNNNRTG 1 cut(s) 1022
MspCI CTTAAG 2 cut(s) 173, 530
MspI CCGG 5 cut(s) 48, 72, 1377, 1391, 1470
MspR9I CCNGG 4 cut(s) 73, 425, 786, 1365
Mva1269I GAATGC 1 cut(s) 360
MvaI CCWGG 3 cut(s) 425, 786, 1365
MvnI CGCG 1 cut(s) 848
MwoI GCNNNNNNNGC 5 cut(s) 366, 404, 980, 1301, 1560
NciI CCSGG 1 cut(s) 73
NdeI CATATG 1 cut(s) 505
NdeII GATC 3 cut(s) 141, 773, 1507
NlaIII CATG 4 cut(s) 488, 625, 1102, 1295
NlaIV GGNNCC 5 cut(s) 52, 211, 1151, 1372, 1389
NmeAIII GCCGAG 1 cut(s) 890
NmuCI GTSAC 2 cut(s) 335, 487
NspI RCATGY 1 cut(s) 1295
OliI CACNNNNGTG 1 cut(s) 1022
PaeI GCATGC 1 cut(s) 1295
PaeR7I CTCGAG 1 cut(s) 755
PctI GAATGC 1 cut(s) 360
PfeI GAWTC 2 cut(s) 196, 1111
PinAI ACCGGT 1 cut(s) 1469
PkrI GCNGC 4 cut(s) 249, 373, 440, 1562
PleI GAGTC 4 cut(s) 1061, 1170, 1454, 1510
PpsI GAGTC 4 cut(s) 1061, 1170, 1454, 1510
PpuMI RGGWCCY 1 cut(s) 26
Psp1406I AACGTT 1 cut(s) 386
Psp5II RGGWCCY 1 cut(s) 26
Psp6I CCWGG 3 cut(s) 423, 784, 1363
PspFI CCCAGC 1 cut(s) 145
PspGI CCWGG 3 cut(s) 423, 784, 1363
PspN4I GGNNCC 5 cut(s) 52, 211, 1151, 1372, 1389
PspPI GGNCC 5 cut(s) 26, 45, 69, 209, 1167
PspPPI RGGWCCY 1 cut(s) 26
PspXI VCTCGAGB 1 cut(s) 755
PsuI RGATCY 1 cut(s) 1507
RsaI GTAC 4 cut(s) 501, 536, 573, 705
RsaNI GTAC 4 cut(s) 500, 535, 572, 704
RseI CAYNNNNRTG 1 cut(s) 1022
SaqAI TTAA 5 cut(s) 174, 203, 531, 729, 1256
SatI GCNGC 4 cut(s) 248, 372, 439, 1561
Sau3AI GATC 3 cut(s) 141, 773, 1507
Sau96I GGNCC 5 cut(s) 26, 45, 69, 209, 1167
ScaI AGTACT 1 cut(s) 536
SchI GAGTC 4 cut(s) 1061, 1170, 1455, 1511
ScrFI CCNGG 4 cut(s) 73, 425, 786, 1365
SduI GDGCHC 1 cut(s) 1152
SfaNI GCATC 2 cut(s) 450, 1132
Sfr274I CTCGAG 1 cut(s) 755
SinI GGWCC 4 cut(s) 26, 45, 69, 1167
SlaI CTCGAG 1 cut(s) 755
SmiMI CAYNNNNRTG 1 cut(s) 1022
SmlI CTYRAG 4 cut(s) 173, 530, 755, 1104
SmoI CTYRAG 4 cut(s) 173, 530, 755, 1104
SpeI ACTAGT 1 cut(s) 694
SphI GCATGC 1 cut(s) 1295
SsiI CCGC 6 cut(s) 118, 247, 439, 911, 1374, 1560
SspI AATATT 2 cut(s) 412, 1183
SspMI CTAG 9 cut(s) 365, 375, 453, 639, 654, 695, 707, 897, 1052
StyD4I CCNGG 4 cut(s) 71, 423, 784, 1363
StyI CCWWGG 2 cut(s) 353, 1422
TaaI ACNGT 5 cut(s) 62, 499, 598, 1061, 1337
TaiI ACGT 2 cut(s) 389, 1014
TaqI TCGA 5 cut(s) 140, 548, 629, 756, 772
TatI WGTACW 2 cut(s) 534, 703
TauI GCSGC 3 cut(s) 250, 441, 1563
TfiI GAWTC 2 cut(s) 196, 1111
Tru1I TTAA 5 cut(s) 174, 203, 531, 729, 1256
Tru9I TTAA 5 cut(s) 174, 203, 531, 729, 1256
TscAI CASTG 4 cut(s) 496, 502, 942, 1139
TseFI GTSAC 2 cut(s) 335, 487
TseI GCWGC 1 cut(s) 371
Tsp45I GTSAC 2 cut(s) 335, 487
TspDTI ATGAA 3 cut(s) 97, 522, 1158
TspRI CASTG 4 cut(s) 496, 502, 942, 1139
Vha464I CTTAAG 2 cut(s) 173, 530
VpaK11BI GGWCC 4 cut(s) 26, 45, 69, 1167
XapI RAATTY 4 cut(s) 463, 509, 871, 959
XceI RCATGY 1 cut(s) 1295
XhoI CTCGAG 1 cut(s) 755
XmiI GTMKAC 1 cut(s) 1089
XspI CTAG 9 cut(s) 365, 375, 453, 639, 654, 695, 707, 897, 1052
ZrmI AGTACT 1 cut(s) 536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.