FvH4_4g19270

Belongs to the importin alpha family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0008963
Physical Location & Seq
Reverse (-)
22954570 .. 22959161
4592 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g19270.t2

Sequence Viewer

Length: 1587 bp
ATGTCGCTCAGGCCGAACGCCAGGACCGAGGTCCGCCGGAACAGGTACAAGGTGGCGGTGGACGCCGAGGAGGGCCGTCGCCGGAGAGAGGACAACATGGTCGAGATCCGGAAGAGCAAGAGGGAAGAGAGCTTGTTGAAGAAGCGCCGCGAAGGTCTTCAGGCGCAGCAATTCCCGGCGTCTGTGCAGCCGGCGAACCTCGAGAAGAGGTTGGAGAGTCTACCGTCGATGGTCGCCGGAGTTTGGTCAACCGATAGTGCTCTGCAGCTGGAGTCTACCACGCAGTTTCGGAAGCTACTTTCTATAGAACGAAGCCCTCCGATTGAGGAGGTTATTCAAGCTGGTGTGGTTCCCCGATTCGTTGAGTTTCTAGTCAGGGAGGATTATCCGCAACTTCAGTTTGAGGCTGCTTGGGCTCTCACAAACATAGCATCTGGAACATCAGACAACACCAAGGTGGTGATTGAACACGGGGCAGTCCCAATATTCGTGAAGCTTCTTGCTTCTCCGAGTGATGATGTTAGAGAGCAGGCTGTTTGGGCATTGGGAAACGTTGCTGGTGATTCTCCTAGATGTCGTGACCTAGTCCTCAGCAGTGGAGCCCTGATGCCGTTGCTGGCCCAGTTGAATGAGCATGCAAAGCTTTCAATGCTAAGAAATGCCACCTGGACACTGTCCAACTTTTGCAGGGGCAAGCCACAGCCTCAGTTTGATCAGGTGAAGCCAGCTCTTCCGGCTCTTGAGCGTTTAGTTCATTCCAATGATGAAGAAGTCTTGACAGATGCTTGCTGGGCACTCTCGTATCTCTCTGATGGTACAAATGACAAAATTCAAGCTGTAATCGAGGCAGGTGTATGCCCGCGACTTGTGCAGCTTCTCTTACATCCATCGCCTGCGGTTCTTATTCCTGCACTTCGCACTGTTGGTAATATTGTGACAGGAGATGACCTTCAGACTCAGTGTATAATCACCAATGGTGCACTTCCATGCCTTCTGAGCCTCTTGACACACAATCATAAGAAGAGCATTAAGAAAGAAGCTTGCTGGACTATCTCAAACATCACAGCTGGAAACAGGGAACAGATACAGCACGTAATAGAAGCTGGTTTGATTGGCCCTCTTGTCAATTTGCTCCAAACTGCTGAGTTTGAGATCAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACTTCTGGTGGCACTCATGAGCAAATCAAGGTCTTGGTGACTGAAGGCTGTATAAAACCATTAAGTGATCTTCTTGTATGCCCTGATCCAAGGATAGTGACCGTCTGCTTAGAAGGGTTGGAAAACATTTTGAAGGTGGGCGAAGCGGAAAAGAATTTGGGTAACAGTGGAACCAACCTGTATGCACAGCTGATTGATGAGGCTGATGGTCTGGAAAAGATTGAAAATCTGCAGACTCACGACAACAACGAGATTTATGAGAAGGCTGTTAAAATTCTTGAGACATATTGGTTAGAGGACGAAGATGAGACATTGCCAGCTGGAGATGCTGCTCAGCCAGGCTTCAACTTTGGAGGCAATGGGCCTCAAGTTCCAACCGGTGGATTCAATTTTAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm Arm_3 IBB

Protein Analysis

529

Amino Acids

58.1

Weight (kDa)

5.26

Isoelectric Point (pI)

47.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IBB PF01749 12 - 94 1e-22 Importin beta binding domain
Arm PF00514 105 - 145 2.6e-10 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 108 - 230 6.4e-06 ARMC5
HEAT_EZ PF13513 130 - 185 6.4e-10 HEAT-like repeat
Arm PF00514 148 - 186 1.1e-12 Armadillo/beta-catenin-like repeat
HEAT_2 PF13646 161 - 267 9.2e-07 HEAT repeats
Arm PF00514 189 - 230 1.9e-07 Armadillo/beta-catenin-like repeat
Arm PF00514 243 - 271 2.7e-07 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 250 - 396 5.1e-07 ARMC5
Arm PF00514 274 - 312 8.2e-10 Armadillo/beta-catenin-like repeat
Arm PF00514 316 - 356 6.6e-10 Armadillo/beta-catenin-like repeat
Arm PF00514 358 - 397 3.9e-12 Armadillo/beta-catenin-like repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0008963)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32880 AT3G06720 AT3G06720 AT4G16143 AT4G16143
fragaria_vesca FvH4_4g19270 FvH4_4g19270
malus_domestica MD13G1158900.v1.1 MD16G1159100.v1.1
prunus_persica Prupe.1G125900_v2.0.a1
pyrus_communis pycom16g13410
rosa_chinensis RchiOBHm_Chr4g0424261
rosa_laevigata RLG00000007492
rosa_multiflora Rmu_sc0006403.1_g000001
rosa_roxburghii Rroxscaffold_5G00366200
rosa_rugosa Rorug04G0194700 Rorug04G0194800
rosa_samantha Rh4AG252100 Rh4BG257500 Rh4CG268200 Rh4DG251900
rosa_wichuraiana Rw4G021740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 839
AasI GACNNNNNNGTC 1 cut(s) 98
Acc36I ACCTGC 1 cut(s) 839
AccB7I CCANNNNNTGG 1 cut(s) 1568
AccI GTMKAC 2 cut(s) 220, 275
AccII CGCG 2 cut(s) 150, 862
AccIII TCCGGA 1 cut(s) 108
AciI CCGC 7 cut(s) 34, 56, 148, 389, 860, 896, 1334
AclI AACGTT 1 cut(s) 552
AclWI GGATC 2 cut(s) 100, 1268
AcsI RAATTY 3 cut(s) 828, 1342, 1461
AcuI CTGAAG 4 cut(s) 143, 380, 935, 1251
AcyI GRCGYC 2 cut(s) 63, 179
AfaI GTAC 2 cut(s) 47, 817
AfiI CCNNNNNNNGG 3 cut(s) 88, 243, 1568
AgeI ACCGGT 1 cut(s) 1565
AjnI CCWGG 3 cut(s) 20, 665, 1525
AleI CACNNNNGTG 1 cut(s) 455
Alw21I GWGCWC 2 cut(s) 262, 982
Alw26I GTCTC 2 cut(s) 1463, 1490
Alw44I GTGCAC 1 cut(s) 978
AlwI GGATC 2 cut(s) 100, 1268
Ama87I CYCGRG 1 cut(s) 200
Aor13HI TCCGGA 1 cut(s) 108
AoxI GGCC 5 cut(s) 11, 73, 618, 1114, 1550
ApaLI GTGCAC 1 cut(s) 978
ApeKI GCWGC 7 cut(s) 166, 187, 265, 407, 871, 1166, 1517
ApoI RAATTY 3 cut(s) 828, 1342, 1461
AsiGI ACCGGT 1 cut(s) 1565
Asp700I GAANNNNTTC 1 cut(s) 156
AspLEI GCGC 2 cut(s) 147, 166
AspS9I GGNCC 6 cut(s) 24, 31, 73, 619, 1115, 1550
AsuC2I CCSGG 1 cut(s) 176
AsuHPI GGTGA 5 cut(s) 472, 572, 730, 961, 1237
AvaI CYCGRG 1 cut(s) 200
AvaII GGWCC 2 cut(s) 24, 31
BaeGI GKGCMC 2 cut(s) 796, 982
BaeI ACNNNNGTAYC 2 cut(s) 785, 818
BanII GRGCYC 2 cut(s) 418, 604
BbsI GAAGAC 1 cut(s) 149
Bbv12I GWGCWC 2 cut(s) 262, 982
BbvCI CCTCAGC 1 cut(s) 590
BbvI GCAGC 7 cut(s) 178, 199, 277, 394, 883, 1153, 1504
BccI CCATC 4 cut(s) 223, 806, 895, 1388
BceAI ACGGC 2 cut(s) 60, 595
BciT130I CCWGG 3 cut(s) 22, 667, 1527
BclI TGATCA 1 cut(s) 712
BcnI CCSGG 1 cut(s) 176
BcoDI GTCTC 2 cut(s) 1463, 1490
BfaI CTAG 3 cut(s) 371, 570, 584
BfmI CTRYAG 3 cut(s) 263, 303, 1418
BfoI RGCGCY 1 cut(s) 148
BfuAI ACCTGC 1 cut(s) 839
BisI GCNGC 8 cut(s) 148, 167, 188, 266, 408, 872, 1167, 1518
BlpI GCTNAGC 1 cut(s) 1521
BlsI GCNGC 8 cut(s) 149, 168, 189, 267, 409, 873, 1168, 1519
Bme1390I CCNGG 4 cut(s) 22, 176, 667, 1527
Bme18I GGWCC 2 cut(s) 24, 31
BmeT110I CYCGRG 1 cut(s) 200
BmgT120I GGNCC 6 cut(s) 24, 31, 73, 619, 1115, 1550
BmiI GGNNCC 3 cut(s) 351, 601, 1360
BmrFI CCNGG 4 cut(s) 22, 176, 667, 1527
BmrI ACTGGG 1 cut(s) 616
BmsI GCATC 4 cut(s) 440, 597, 772, 1504
BmuI ACTGGG 1 cut(s) 616
BoxI GACNNNNGTC 1 cut(s) 29
BpiI GAAGAC 1 cut(s) 149
BpmI CTGGAG 2 cut(s) 290, 1530
Bpu10I CCTNAGC 2 cut(s) 8, 590
Bpu1102I GCTNAGC 1 cut(s) 1521
BpuEI CTTGAG 3 cut(s) 761, 1487, 1539
BpuMI CCSGG 1 cut(s) 176
BsaAI YACGTR 1 cut(s) 1093
BsaHI GRCGYC 2 cut(s) 63, 179
BsaJI CCNNGG 4 cut(s) 27, 66, 453, 1277
BsaWI WCCGGW 2 cut(s) 108, 1565
Bsc4I CCNNNNNNNGG 3 cut(s) 88, 243, 1568
Bse118I RCCGGY 2 cut(s) 190, 1565
Bse1I ACTGG 1 cut(s) 622
Bse3DI GCAATG 2 cut(s) 1499, 1552
BseAI TCCGGA 1 cut(s) 108
BseBI CCWGG 3 cut(s) 22, 667, 1527
BseDI CCNNGG 4 cut(s) 27, 66, 453, 1277
BseGI GGATG 1 cut(s) 883
BseLI CCNNNNNNNGG 3 cut(s) 88, 243, 1568
BseMI GCAATG 2 cut(s) 1499, 1552
BseMII CTCAG 7 cut(s) 22, 604, 719, 971, 986, 1134, 1535
BseNI ACTGG 1 cut(s) 622
BseRI GAGGAG 2 cut(s) 83, 341
BseSI GKGCMC 2 cut(s) 796, 982
BseXI GCAGC 7 cut(s) 178, 199, 277, 394, 883, 1153, 1504
BseYI CCCAGC 1 cut(s) 789
BsgI GTGCAG 3 cut(s) 206, 890, 894
Bsh1236I CGCG 2 cut(s) 150, 862
BshFI GGCC 5 cut(s) 13, 75, 620, 1116, 1552
BshTI ACCGGT 1 cut(s) 1565
BsiHKAI GWGCWC 2 cut(s) 262, 982
BsiHKCI CYCGRG 1 cut(s) 200
BsiSI CCGG 8 cut(s) 37, 82, 109, 176, 191, 237, 734, 1566
BslFI GGGAC 1 cut(s) 464
BslI CCNNNNNNNGG 3 cut(s) 88, 243, 1568
BsmAI GTCTC 2 cut(s) 1463, 1490
BsmFI GGGAC 1 cut(s) 464
BsnI GGCC 5 cut(s) 13, 75, 620, 1116, 1552
BsoBI CYCGRG 1 cut(s) 200
Bsp1286I GDGCHC 5 cut(s) 262, 418, 604, 796, 982
Bsp13I TCCGGA 1 cut(s) 108
Bsp143I GATC 5 cut(s) 105, 712, 1152, 1255, 1273
Bsp1720I GCTNAGC 1 cut(s) 1521
BspACI CCGC 7 cut(s) 34, 56, 148, 389, 860, 896, 1334
BspANI GGCC 5 cut(s) 13, 75, 620, 1116, 1552
BspCNI CTCAG 7 cut(s) 21, 603, 718, 970, 987, 1135, 1534
BspEI TCCGGA 1 cut(s) 108
BspFNI CGCG 2 cut(s) 150, 862
BspHI TCATGA 1 cut(s) 1204
BspLI GGNNCC 3 cut(s) 351, 601, 1360
BspMAI CTGCAG 2 cut(s) 267, 1422
BspMI ACCTGC 1 cut(s) 839
BspPI GGATC 2 cut(s) 100, 1268
BspQI GCTCTTC 3 cut(s) 107, 735, 1016
BsrDI GCAATG 2 cut(s) 1499, 1552
BsrFI RCCGGY 2 cut(s) 190, 1565
BsrI ACTGG 1 cut(s) 622
BssAI RCCGGY 2 cut(s) 190, 1565
BssECI CCNNGG 4 cut(s) 27, 66, 453, 1277
BssMI GATC 5 cut(s) 105, 712, 1152, 1255, 1273
BssNI GRCGYC 2 cut(s) 63, 179
BssT1I CCWWGG 2 cut(s) 453, 1277
Bst2UI CCWGG 3 cut(s) 22, 667, 1527
Bst4CI ACNGT 5 cut(s) 225, 675, 922, 1291, 1355
Bst6I CTCTTC 5 cut(s) 107, 120, 200, 735, 1016
BstACI GRCGYC 2 cut(s) 63, 179
BstBAI YACGTR 1 cut(s) 1093
BstDEI CTNAG 9 cut(s) 8, 590, 653, 705, 957, 995, 1143, 1297, 1521
BstF5I GGATG 1 cut(s) 883
BstFNI CGCG 2 cut(s) 150, 862
BstH2I RGCGCY 1 cut(s) 148
BstHHI GCGC 2 cut(s) 147, 166
BstKTI GATC 5 cut(s) 108, 715, 1155, 1258, 1276
BstMAI GTCTC 2 cut(s) 1463, 1490
BstMBI GATC 5 cut(s) 105, 712, 1152, 1255, 1273
BstNI CCWGG 3 cut(s) 22, 667, 1527
BstNSI RCATGY 1 cut(s) 638
BstPAI GACNNNNGTC 1 cut(s) 29
BstSCI CCNGG 4 cut(s) 20, 174, 665, 1525
BstSFI CTRYAG 3 cut(s) 263, 303, 1418
BstSLI GKGCMC 2 cut(s) 796, 982
BstUI CGCG 2 cut(s) 150, 862
BstV1I GCAGC 7 cut(s) 178, 199, 277, 394, 883, 1153, 1504
BstV2I GAAGAC 1 cut(s) 149
BstX2I RGATCY 1 cut(s) 105
BstYI RGATCY 1 cut(s) 105
BsuRI GGCC 5 cut(s) 13, 75, 620, 1116, 1552
BtgZI GCGATG 1 cut(s) 873
BtsCI GGATG 1 cut(s) 883
BtsI GCAGTG 1 cut(s) 601
BtsIMutI CAGTG 5 cut(s) 601, 671, 918, 965, 1360
BveI ACCTGC 1 cut(s) 839
CciI TCATGA 1 cut(s) 1204
CfoI GCGC 2 cut(s) 147, 166
Cfr10I RCCGGY 2 cut(s) 190, 1565
Cfr13I GGNCC 6 cut(s) 24, 31, 73, 619, 1115, 1550
CseI GACGC 2 cut(s) 71, 168
Csp6I GTAC 2 cut(s) 46, 816
CspAI ACCGGT 1 cut(s) 1565
CviAII CATG 4 cut(s) 97, 635, 987, 1205
CviQI GTAC 2 cut(s) 46, 816
DdeI CTNAG 9 cut(s) 8, 590, 653, 705, 957, 995, 1143, 1297, 1521
DpnI GATC 5 cut(s) 107, 714, 1154, 1257, 1275
DpnII GATC 5 cut(s) 105, 712, 1152, 1255, 1273
DrdI GACNNNNNNGTC 1 cut(s) 98
DseDI GACNNNNNNGTC 1 cut(s) 98
Eam1104I CTCTTC 5 cut(s) 107, 120, 200, 735, 1016
EarI CTCTTC 5 cut(s) 107, 120, 200, 735, 1016
EciI GGCGGA 1 cut(s) 23
Eco130I CCWWGG 2 cut(s) 453, 1277
Eco24I GRGCYC 2 cut(s) 418, 604
Eco47I GGWCC 2 cut(s) 24, 31
Eco57I CTGAAG 4 cut(s) 143, 380, 935, 1251
Eco88I CYCGRG 1 cut(s) 200
EcoRII CCWGG 3 cut(s) 20, 665, 1525
EcoT14I CCWWGG 2 cut(s) 453, 1277
EcoT38I GRGCYC 2 cut(s) 418, 604
ErhI CCWWGG 2 cut(s) 453, 1277
FaeI CATG 4 cut(s) 100, 638, 990, 1208
FaqI GGGAC 1 cut(s) 464
FatI CATG 4 cut(s) 96, 634, 986, 1204
FauI CCCGC 1 cut(s) 867
FbaI TGATCA 1 cut(s) 712
FblI GTMKAC 2 cut(s) 220, 275
Fnu4HI GCNGC 8 cut(s) 148, 167, 188, 266, 408, 872, 1167, 1518
FokI GGATG 1 cut(s) 870
FriOI GRGCYC 2 cut(s) 418, 604
Fsp4HI GCNGC 8 cut(s) 148, 167, 188, 266, 408, 872, 1167, 1518
FspBI CTAG 3 cut(s) 371, 570, 584
GlaI GCGC 2 cut(s) 146, 165
GluI GCNGC 8 cut(s) 148, 167, 188, 266, 408, 872, 1167, 1518
GsaI CCCAGC 1 cut(s) 793
GsuI CTGGAG 2 cut(s) 290, 1530
HaeII RGCGCY 1 cut(s) 148
HaeIII GGCC 5 cut(s) 13, 75, 620, 1116, 1552
HapII CCGG 8 cut(s) 37, 82, 109, 176, 191, 237, 734, 1566
HgaI GACGC 2 cut(s) 71, 168
HhaI GCGC 2 cut(s) 147, 166
Hin1I GRCGYC 2 cut(s) 63, 179
Hin1II CATG 4 cut(s) 100, 638, 990, 1208
Hin6I GCGC 2 cut(s) 145, 164
HinP1I GCGC 2 cut(s) 145, 164
HincII GTYRAC 1 cut(s) 249
HindII GTYRAC 1 cut(s) 249
HindIII AAGCTT 3 cut(s) 494, 641, 1038
HinfI GANTC 7 cut(s) 217, 272, 357, 563, 955, 1423, 1572
HpaII CCGG 8 cut(s) 37, 82, 109, 176, 191, 237, 734, 1566
HphI GGTGA 5 cut(s) 472, 572, 730, 961, 1237
Hpy166II GTNNAC 5 cut(s) 61, 221, 249, 276, 980
Hpy188I TCNGA 7 cut(s) 291, 321, 445, 510, 811, 954, 996
Hpy8I GTNNAC 5 cut(s) 61, 221, 249, 276, 980
Hpy99I CGWCG 2 cut(s) 81, 229
HpyAV CCTTC 7 cut(s) 146, 959, 1001, 1226, 1295, 1315, 1444
HpyCH4III ACNGT 5 cut(s) 225, 675, 922, 1291, 1355
HpyCH4IV ACGT 2 cut(s) 552, 1092
HpyCH4V TGCA 9 cut(s) 187, 265, 638, 687, 871, 911, 980, 1373, 1420
HpyF3I CTNAG 9 cut(s) 8, 590, 653, 705, 957, 995, 1143, 1297, 1521
HpySE526I ACGT 2 cut(s) 552, 1092
Hsp92I GRCGYC 2 cut(s) 63, 179
Hsp92II CATG 4 cut(s) 100, 638, 990, 1208
HspAI GCGC 2 cut(s) 145, 164
Kpn2I TCCGGA 1 cut(s) 108
KroI GCCGGC 1 cut(s) 190
KroNI GCCGGC 1 cut(s) 192
Ksp22I TGATCA 1 cut(s) 712
Kzo9I GATC 5 cut(s) 105, 712, 1152, 1255, 1273
LguI GCTCTTC 3 cut(s) 107, 735, 1016
LmnI GCTCC 2 cut(s) 599, 1137
Lsp1109I GCAGC 7 cut(s) 178, 199, 277, 394, 883, 1153, 1504
LweI GCATC 4 cut(s) 440, 597, 772, 1504
MaeI CTAG 3 cut(s) 371, 570, 584
MaeII ACGT 2 cut(s) 552, 1092
MaeIII GTNAC 5 cut(s) 578, 934, 1225, 1285, 1349
MalI GATC 5 cut(s) 107, 714, 1154, 1257, 1275
MboI GATC 5 cut(s) 105, 712, 1152, 1255, 1273
MflI RGATCY 1 cut(s) 105
MhlI GDGCHC 5 cut(s) 262, 418, 604, 796, 982
MluCI AATT 7 cut(s) 170, 828, 1126, 1176, 1342, 1461, 1576
MlyI GAGTC 4 cut(s) 226, 281, 949, 1417
MmeI TCCRAC 4 cut(s) 192, 702, 1287, 1586
MroI TCCGGA 1 cut(s) 108
MroNI GCCGGC 1 cut(s) 190
MroXI GAANNNNTTC 1 cut(s) 156
MseI TTAA 3 cut(s) 1029, 1250, 1458
MslI CAYNNNNRTG 3 cut(s) 455, 759, 985
MspA1I CMGCKG 4 cut(s) 268, 1067, 1378, 1508
MspI CCGG 8 cut(s) 37, 82, 109, 176, 191, 237, 734, 1566
MspR9I CCNGG 4 cut(s) 22, 176, 667, 1527
MvaI CCWGG 3 cut(s) 22, 667, 1527
MvnI CGCG 2 cut(s) 150, 862
NaeI GCCGGC 1 cut(s) 192
NciI CCSGG 1 cut(s) 176
NdeII GATC 5 cut(s) 105, 712, 1152, 1255, 1273
NgoMIV GCCGGC 1 cut(s) 190
NlaIII CATG 4 cut(s) 100, 638, 990, 1208
NlaIV GGNNCC 3 cut(s) 351, 601, 1360
NmeAIII GCCGAG 1 cut(s) 91
NmuCI GTSAC 4 cut(s) 578, 934, 1225, 1285
NspI RCATGY 1 cut(s) 638
OliI CACNNNNGTG 1 cut(s) 455
PaeI GCATGC 1 cut(s) 638
PaeR7I CTCGAG 1 cut(s) 200
PagI TCATGA 1 cut(s) 1204
PaqCI CACCTGC 1 cut(s) 839
PciSI GCTCTTC 3 cut(s) 107, 735, 1016
PcsI WCGNNNNNNNCGW 3 cut(s) 11, 24, 1434
PdiI GCCGGC 1 cut(s) 192
PdmI GAANNNNTTC 1 cut(s) 156
PfeI GAWTC 3 cut(s) 357, 563, 1572
PflFI GACNNNGTC 2 cut(s) 584, 673
PflMI CCANNNNNTGG 1 cut(s) 1568
PinAI ACCGGT 1 cut(s) 1565
PkrI GCNGC 8 cut(s) 149, 168, 189, 267, 409, 873, 1168, 1519
PleI GAGTC 4 cut(s) 225, 280, 949, 1417
PpsI GAGTC 4 cut(s) 225, 280, 949, 1417
Ppu21I YACGTR 1 cut(s) 1093
PshAI GACNNNNGTC 1 cut(s) 29
Psp1406I AACGTT 1 cut(s) 552
Psp6I CCWGG 3 cut(s) 20, 665, 1525
PspFI CCCAGC 1 cut(s) 789
PspGI CCWGG 3 cut(s) 20, 665, 1525
PspN4I GGNNCC 3 cut(s) 351, 601, 1360
PspPI GGNCC 6 cut(s) 24, 31, 73, 619, 1115, 1550
PstI CTGCAG 2 cut(s) 267, 1422
PsuI RGATCY 1 cut(s) 105
PsyI GACNNNGTC 2 cut(s) 584, 673
PvuII CAGCTG 4 cut(s) 268, 1067, 1378, 1508
RsaI GTAC 2 cut(s) 47, 817
RsaNI GTAC 2 cut(s) 46, 816
RseI CAYNNNNRTG 3 cut(s) 455, 759, 985
SapI GCTCTTC 3 cut(s) 107, 735, 1016
SaqAI TTAA 3 cut(s) 1029, 1250, 1458
SatI GCNGC 8 cut(s) 148, 167, 188, 266, 408, 872, 1167, 1518
Sau3AI GATC 5 cut(s) 105, 712, 1152, 1255, 1273
Sau96I GGNCC 6 cut(s) 24, 31, 73, 619, 1115, 1550
SchI GAGTC 4 cut(s) 226, 281, 949, 1417
ScrFI CCNGG 4 cut(s) 22, 176, 667, 1527
SduI GDGCHC 5 cut(s) 262, 418, 604, 796, 982
SfaNI GCATC 4 cut(s) 440, 597, 772, 1504
SfcI CTRYAG 3 cut(s) 263, 303, 1418
Sfr274I CTCGAG 1 cut(s) 200
SinI GGWCC 2 cut(s) 24, 31
SlaI CTCGAG 1 cut(s) 200
SmiMI CAYNNNNRTG 3 cut(s) 455, 759, 985
SmlI CTYRAG 4 cut(s) 200, 740, 1466, 1554
SmoI CTYRAG 4 cut(s) 200, 740, 1466, 1554
SphI GCATGC 1 cut(s) 638
Sse9I AATT 7 cut(s) 170, 828, 1126, 1176, 1342, 1461, 1576
SsiI CCGC 7 cut(s) 34, 56, 148, 389, 860, 896, 1334
SspI AATATT 2 cut(s) 486, 931
SspMI CTAG 3 cut(s) 371, 570, 584
StyD4I CCNGG 4 cut(s) 20, 174, 665, 1525
StyI CCWWGG 2 cut(s) 453, 1277
TaaI ACNGT 5 cut(s) 225, 675, 922, 1291, 1355
TaiI ACGT 2 cut(s) 555, 1095
TaqI TCGA 4 cut(s) 102, 201, 227, 843
TaqII GACCGA 1 cut(s) 41
TasI AATT 7 cut(s) 170, 828, 1126, 1176, 1342, 1461, 1576
TauI GCSGC 1 cut(s) 150
TfiI GAWTC 3 cut(s) 357, 563, 1572
Tru1I TTAA 3 cut(s) 1029, 1250, 1458
Tru9I TTAA 3 cut(s) 1029, 1250, 1458
TscAI CASTG 5 cut(s) 601, 678, 925, 965, 1360
TseFI GTSAC 4 cut(s) 578, 934, 1225, 1285
TseI GCWGC 7 cut(s) 166, 187, 265, 407, 871, 1166, 1517
Tsp45I GTSAC 4 cut(s) 578, 934, 1225, 1285
TspDTI ATGAA 2 cut(s) 743, 780
TspRI CASTG 5 cut(s) 601, 678, 925, 965, 1360
Tth111I GACNNNGTC 2 cut(s) 584, 673
Van91I CCANNNNNTGG 1 cut(s) 1568
VneI GTGCAC 1 cut(s) 978
VpaK11BI GGWCC 2 cut(s) 24, 31
XapI RAATTY 3 cut(s) 828, 1342, 1461
XceI RCATGY 1 cut(s) 638
XhoI CTCGAG 1 cut(s) 200
XmiI GTMKAC 2 cut(s) 220, 275
XmnI GAANNNNTTC 1 cut(s) 156
XspI CTAG 3 cut(s) 371, 570, 584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.