Rroxscaffold_5G00366200

Belongs to the importin alpha family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0008963
Physical Location & Seq
Reverse (-)
48045815 .. 48050341
4527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00366200.1

Sequence Viewer

Length: 1779 bp
ATGCCGACCGATGATCTCACCGACCGATCTAAAAGTGTCAGCCATCCAACTATATACTCACTCCATACACTATCAACCTCGAAGCCACGAGCACCCTATGTCCGCATTGGTTTCTTCTCCGCACCTCTCTCCGTCTCCGTCTCCGGCCGATTACAGCACAACCAGTTAGGGTTTCAGCAGCAAAAAAACGACATGTCGCTCAGGCCGAACGCCAGGACTGAGGTCCGCCGGAATCGGTACAAGGTGGCGGTGGACGCCGAGGAGGGCCGTCGCCGGAGGGAGGACAACATGGTCGAGATCCGGAAGAGCAAGAGGGAGGAGAGTTTGTTAAAGAAACGCCGCGAAGGTCTTCAAGCTCAGCAATTCCCGGCCTCTGTTCAGCCACCGAACCTCGAGAAGAAGTTAGAGAGTCTACCGTCGATGGTTGCAGGGGTTTGGTCCACCGAAAGTGCTCTGCAGCTGGAGGCTACTACGCAGTTTAGGAAACTACTTTCCATAGAAAGAAGCCCTCCAATTGAGGAAGTAATTCAAGCTGGGGTTGTTCCGCGATTTGTTGAGTTCCTTGTCAGGGAGGATTATCCACAACTTCAGTTTGAGGCTGCTTGGGCTCTTACAAACATAGCGTCAGGAACATCGGACAACACCAGGGTGGTGATTGATCACGGGGCAGTCCCAATATTCGTGAAGCTTCTTGCTTCTCCGAGTGATGATGTTAGAGAGCAGGCTGTTTGGGCATTGGGAAATGTTGCTGGTGATTCTCCAAGATGTCGTGATCTAGTCCTCAGCAGTGGTGCCTTGATGCCGTTGCTGGCTCAGTTGAATGAGCATGCAAAGCTTTCAATGCTGAGAAATGCCACCTGGACACTGTCAAACTTTTGCAGGGGCAAGCCGCAGCCTCAGTTTGATCAGGTGAAGCCAGCTCTTCCAGCTCTTGAGCGTTTAGTTCATTCCAATGATGAAGAAGTCTTAACAGATGCCTGCTGGGCACTCTCATATCTCTCGGATGGTACAAATGACAAAATTCAAGCAGTCATCGAGGCAGGTGTCTGCCCGCGACTTGTGCAGCTTCTCTTACATCCATCTCCTGCGGTTCTCATTCCAGCACTTCGCACTGTTGGTAATATTGTGACAGGAGATGATCTTCAGACTCAGTGTATAATCACCAATGGTGCACTTCCATGCCTTCTGAGCCTCTTGACACATAATCATAAGAAGAGCATCAAGAAAGAAGCATGCTGGACTATCTCAAACATTACAGCTGGAAACAGGGAACAGATACAGTACGTAATTGAAGCTGGTTTGATTGGCCCTCTTGTCAATTTGCTCCAAACTGCTGAGTTTGAGATCAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACTTCTGGTGGCACTCATGAGCAAATTAAGATCTTGGTGACTGAAGGCTGTATAAAACCATTAAGTGATCTCCTTGTATGCCCTGATCCAAGGATAGTAACTGTCTGCTTAGAAGGGTTGGAGAACATTTTGAAGGTTGGGGAAGCTGAAAAGAGTTTGGGTAACAGTGGAACCAACCTGTATGCACAGTTGATTGATGAGGCTGATGGTCTGGAAAAGATTGAAAATCTGCAGACTCACGACAACAACGAGATCTATGAGAAGGCAGTTAAAATTCTTGAGACATATTGGTTGGAGGACGAAGACGAGACATTACCAGCAGGAGATGGTACTCAGCCAGGCTTTAACTTTGGAGGGAATGGGCCTCAAGTTCCAACTGGTGGATTCAATTTTAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm Arm_3 IBB

Protein Analysis

592

Amino Acids

65.27

Weight (kDa)

5.56

Isoelectric Point (pI)

45.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IBB PF01749 76 - 158 1.2e-22 Importin beta binding domain
Arm PF00514 169 - 209 4.3e-10 Armadillo/beta-catenin-like repeat
HEAT_EZ PF13513 194 - 249 5.3e-09 HEAT-like repeat
Arm PF00514 212 - 250 2.4e-12 Armadillo/beta-catenin-like repeat
HEAT_2 PF13646 225 - 331 1.7e-06 HEAT repeats
Arm PF00514 253 - 294 3.2e-07 Armadillo/beta-catenin-like repeat
Arm PF00514 307 - 335 4.3e-07 Armadillo/beta-catenin-like repeat
Arm PF00514 338 - 376 1.3e-09 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 372 - 553 1.4e-08 ARMC5
Arm PF00514 380 - 420 1.1e-09 Armadillo/beta-catenin-like repeat
Arm PF00514 422 - 461 1.9e-12 Armadillo/beta-catenin-like repeat
Arm_3 PF16186 519 - 563 3e-21 Atypical Arm repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0008963)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32880 AT3G06720 AT3G06720 AT4G16143 AT4G16143
fragaria_vesca FvH4_4g19270 FvH4_4g19270
malus_domestica MD13G1158900.v1.1 MD16G1159100.v1.1
prunus_persica Prupe.1G125900_v2.0.a1
pyrus_communis pycom16g13410
rosa_chinensis RchiOBHm_Chr4g0424261
rosa_laevigata RLG00000007492
rosa_multiflora Rmu_sc0006403.1_g000001
rosa_roxburghii Rroxscaffold_5G00366200
rosa_rugosa Rorug04G0194700 Rorug04G0194800
rosa_samantha Rh4AG252100 Rh4BG257500 Rh4CG268200 Rh4DG251900
rosa_wichuraiana Rw4G021740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1031
AasI GACNNNNNNGTC 1 cut(s) 290
Acc36I ACCTGC 1 cut(s) 1031
AccB1I GGYRCC 1 cut(s) 791
AccB7I CCANNNNNTGG 1 cut(s) 1760
AccI GTMKAC 1 cut(s) 412
AccII CGCG 3 cut(s) 342, 547, 1054
AccIII TCCGGA 1 cut(s) 300
AciI CCGC 9 cut(s) 103, 120, 226, 248, 340, 545, 890, 1052, 1088
AclWI GGATC 2 cut(s) 292, 1460
AcoI YGGCCR 1 cut(s) 145
AcsI RAATTY 2 cut(s) 1020, 1653
AcuI CTGAAG 3 cut(s) 572, 1127, 1443
AcyI GRCGYC 1 cut(s) 255
AfaI GTAC 4 cut(s) 239, 1009, 1283, 1711
AfiI CCNNNNNNNGG 3 cut(s) 280, 568, 1760
AflIII ACRYGT 1 cut(s) 192
AjnI CCWGG 4 cut(s) 212, 644, 857, 1717
AleI CACNNNNGTG 1 cut(s) 647
Alw21I GWGCWC 3 cut(s) 94, 454, 1174
Alw26I GTCTC 4 cut(s) 139, 145, 1655, 1682
Alw44I GTGCAC 1 cut(s) 1170
AlwI GGATC 2 cut(s) 292, 1460
Ama87I CYCGRG 1 cut(s) 392
Aor13HI TCCGGA 1 cut(s) 300
AoxI GGCC 6 cut(s) 145, 203, 265, 369, 1306, 1742
ApaLI GTGCAC 1 cut(s) 1170
ApeKI GCWGC 6 cut(s) 178, 457, 599, 892, 1063, 1358
ApoI RAATTY 2 cut(s) 1020, 1653
ArsI GACNNNNNNTTYG 2 cut(s) 608, 640
Asp700I GAANNNNTTC 2 cut(s) 348, 525
AspS9I GGNCC 5 cut(s) 223, 265, 438, 1307, 1742
AsuC2I CCSGG 1 cut(s) 368
AsuHPI GGTGA 6 cut(s) 10, 664, 764, 922, 1153, 1429
AvaI CYCGRG 1 cut(s) 392
AvaII GGWCC 2 cut(s) 223, 438
BaeGI GKGCMC 2 cut(s) 988, 1174
BanI GGYRCC 1 cut(s) 791
BanII GRGCYC 1 cut(s) 610
BauI CACGAG 1 cut(s) 87
BbsI GAAGAC 2 cut(s) 341, 1689
Bbv12I GWGCWC 3 cut(s) 94, 454, 1174
BbvCI CCTCAGC 1 cut(s) 782
BbvI GCAGC 6 cut(s) 190, 469, 586, 904, 1075, 1345
BccI CCATC 6 cut(s) 51, 415, 998, 1087, 1580, 1700
BceAI ACGGC 2 cut(s) 252, 787
BciT130I CCWGG 4 cut(s) 214, 646, 859, 1719
BclI TGATCA 2 cut(s) 658, 904
BcnI CCSGG 1 cut(s) 368
BcoDI GTCTC 4 cut(s) 139, 145, 1655, 1682
BfaI CTAG 1 cut(s) 776
BfmI CTRYAG 2 cut(s) 455, 1610
BfuAI ACCTGC 1 cut(s) 1031
BglI GCCNNNNNGGC 1 cut(s) 983
BglII AGATCT 2 cut(s) 1410, 1632
BisI GCNGC 8 cut(s) 179, 340, 458, 600, 890, 893, 1064, 1359
BlpI GCTNAGC 1 cut(s) 357
BlsI GCNGC 8 cut(s) 180, 341, 459, 601, 891, 894, 1065, 1360
Bme1390I CCNGG 5 cut(s) 214, 368, 646, 859, 1719
Bme18I GGWCC 2 cut(s) 223, 438
BmeT110I CYCGRG 1 cut(s) 392
BmgT120I GGNCC 5 cut(s) 223, 265, 438, 1307, 1742
BmiI GGNNCC 2 cut(s) 793, 1552
BmrFI CCNGG 5 cut(s) 214, 368, 646, 859, 1719
BmsI GCATC 3 cut(s) 789, 964, 1227
BoxI GACNNNNGTC 1 cut(s) 221
BpiI GAAGAC 2 cut(s) 341, 1689
BpmI CTGGAG 1 cut(s) 482
Bpu10I CCTNAGC 2 cut(s) 200, 782
Bpu1102I GCTNAGC 1 cut(s) 357
BpuEI CTTGAG 3 cut(s) 953, 1679, 1731
BpuMI CCSGG 1 cut(s) 368
BsaAI YACGTR 1 cut(s) 1285
BsaHI GRCGYC 1 cut(s) 255
BsaJI CCNNGG 3 cut(s) 258, 645, 1469
BsaWI WCCGGW 1 cut(s) 300
BsaXI ACNNNNNCTCC 2 cut(s) 311, 341
Bsc4I CCNNNNNNNGG 3 cut(s) 280, 568, 1760
Bse1I ACTGG 2 cut(s) 163, 1762
BseAI TCCGGA 1 cut(s) 300
BseBI CCWGG 4 cut(s) 214, 646, 859, 1719
BseDI CCNNGG 3 cut(s) 258, 645, 1469
BseGI GGATG 3 cut(s) 43, 1009, 1075
BseLI CCNNNNNNNGG 3 cut(s) 280, 568, 1760
BseNI ACTGG 2 cut(s) 163, 1762
BseRI GAGGAG 2 cut(s) 275, 332
BseSI GKGCMC 2 cut(s) 988, 1174
BseX3I CGGCCG 1 cut(s) 145
BseXI GCAGC 6 cut(s) 190, 469, 586, 904, 1075, 1345
BseYI CCCAGC 2 cut(s) 533, 981
BsgI GTGCAG 1 cut(s) 1082
Bsh1236I CGCG 3 cut(s) 342, 547, 1054
Bsh1285I CGRYCG 3 cut(s) 9, 25, 148
BshFI GGCC 6 cut(s) 147, 205, 267, 371, 1308, 1744
BshNI GGYRCC 1 cut(s) 791
BsiEI CGRYCG 3 cut(s) 9, 25, 148
BsiHKAI GWGCWC 3 cut(s) 94, 454, 1174
BsiHKCI CYCGRG 1 cut(s) 392
BsiSI CCGG 5 cut(s) 144, 229, 274, 301, 368
BslFI GGGAC 1 cut(s) 656
BslI CCNNNNNNNGG 3 cut(s) 280, 568, 1760
BsmAI GTCTC 4 cut(s) 139, 145, 1655, 1682
BsmBI CGTCTC 2 cut(s) 139, 145
BsmFI GGGAC 1 cut(s) 656
BsnI GGCC 6 cut(s) 147, 205, 267, 371, 1308, 1744
BsoBI CYCGRG 1 cut(s) 392
Bsp1286I GDGCHC 5 cut(s) 94, 454, 610, 988, 1174
Bsp13I TCCGGA 1 cut(s) 300
Bsp1720I GCTNAGC 1 cut(s) 357
BspACI CCGC 9 cut(s) 103, 120, 226, 248, 340, 545, 890, 1052, 1088
BspANI GGCC 6 cut(s) 147, 205, 267, 371, 1308, 1744
BspEI TCCGGA 1 cut(s) 300
BspFNI CGCG 3 cut(s) 342, 547, 1054
BspHI TCATGA 1 cut(s) 1396
BspLI GGNNCC 2 cut(s) 793, 1552
BspMAI CTGCAG 2 cut(s) 459, 1614
BspMI ACCTGC 1 cut(s) 1031
BspPI GGATC 2 cut(s) 292, 1460
BspQI GCTCTTC 3 cut(s) 299, 927, 1208
BspT107I GGYRCC 1 cut(s) 791
BsrI ACTGG 2 cut(s) 163, 1762
BssECI CCNNGG 3 cut(s) 258, 645, 1469
BssNI GRCGYC 1 cut(s) 255
BssSI CACGAG 1 cut(s) 87
BssT1I CCWWGG 1 cut(s) 1469
Bst2BI CACGAG 1 cut(s) 87
Bst2UI CCWGG 4 cut(s) 214, 646, 859, 1719
Bst4CI ACNGT 7 cut(s) 417, 867, 1114, 1281, 1483, 1547, 1569
Bst6I CTCTTC 3 cut(s) 299, 927, 1208
BstACI GRCGYC 1 cut(s) 255
BstBAI YACGTR 1 cut(s) 1285
BstC8I GCNNGC 8 cut(s) 723, 810, 828, 887, 918, 979, 1052, 1234
BstF5I GGATG 3 cut(s) 43, 1009, 1075
BstFNI CGCG 3 cut(s) 342, 547, 1054
BstMAI GTCTC 4 cut(s) 139, 145, 1655, 1682
BstMCI CGRYCG 3 cut(s) 9, 25, 148
BstNI CCWGG 4 cut(s) 214, 646, 859, 1719
BstNSI RCATGY 3 cut(s) 196, 830, 1236
BstPAI GACNNNNGTC 1 cut(s) 221
BstSCI CCNGG 5 cut(s) 212, 366, 644, 857, 1717
BstSFI CTRYAG 2 cut(s) 455, 1610
BstSLI GKGCMC 2 cut(s) 988, 1174
BstSNI TACGTA 1 cut(s) 1285
BstUI CGCG 3 cut(s) 342, 547, 1054
BstV1I GCAGC 6 cut(s) 190, 469, 586, 904, 1075, 1345
BstV2I GAAGAC 2 cut(s) 341, 1689
BstX2I RGATCY 3 cut(s) 297, 1410, 1632
BstYI RGATCY 3 cut(s) 297, 1410, 1632
BstZI CGGCCG 1 cut(s) 145
BsuRI GGCC 6 cut(s) 147, 205, 267, 371, 1308, 1744
BtsCI GGATG 3 cut(s) 43, 1009, 1075
BtsI GCAGTG 1 cut(s) 793
BtsIMutI CAGTG 5 cut(s) 793, 863, 1110, 1157, 1552
BveI ACCTGC 1 cut(s) 1031
Cac8I GCNNGC 8 cut(s) 723, 810, 828, 887, 918, 979, 1052, 1234
CciI TCATGA 1 cut(s) 1396
Cfr13I GGNCC 5 cut(s) 223, 265, 438, 1307, 1742
CseI GACGC 2 cut(s) 263, 612
Csp6I GTAC 4 cut(s) 238, 1008, 1282, 1710
CviAII CATG 6 cut(s) 193, 289, 827, 1179, 1233, 1397
CviQI GTAC 4 cut(s) 238, 1008, 1282, 1710
DrdI GACNNNNNNGTC 1 cut(s) 290
DseDI GACNNNNNNGTC 1 cut(s) 290
EaeI YGGCCR 1 cut(s) 145
EagI CGGCCG 1 cut(s) 145
Eam1104I CTCTTC 3 cut(s) 299, 927, 1208
EarI CTCTTC 3 cut(s) 299, 927, 1208
EciI GGCGGA 1 cut(s) 215
EclXI CGGCCG 1 cut(s) 145
Eco105I TACGTA 1 cut(s) 1285
Eco130I CCWWGG 1 cut(s) 1469
Eco24I GRGCYC 1 cut(s) 610
Eco47I GGWCC 2 cut(s) 223, 438
Eco52I CGGCCG 1 cut(s) 145
Eco57I CTGAAG 3 cut(s) 572, 1127, 1443
Eco88I CYCGRG 1 cut(s) 392
EcoRII CCWGG 4 cut(s) 212, 644, 857, 1717
EcoT14I CCWWGG 1 cut(s) 1469
EcoT38I GRGCYC 1 cut(s) 610
ErhI CCWWGG 1 cut(s) 1469
Esp3I CGTCTC 2 cut(s) 139, 145
FaeI CATG 6 cut(s) 196, 292, 830, 1182, 1236, 1400
FaqI GGGAC 1 cut(s) 656
FatI CATG 6 cut(s) 192, 288, 826, 1178, 1232, 1396
FauI CCCGC 1 cut(s) 1059
FbaI TGATCA 2 cut(s) 658, 904
FblI GTMKAC 1 cut(s) 412
Fnu4HI GCNGC 8 cut(s) 179, 340, 458, 600, 890, 893, 1064, 1359
FokI GGATG 3 cut(s) 30, 1016, 1062
FriOI GRGCYC 1 cut(s) 610
Fsp4HI GCNGC 8 cut(s) 179, 340, 458, 600, 890, 893, 1064, 1359
FspBI CTAG 1 cut(s) 776
GluI GCNGC 8 cut(s) 179, 340, 458, 600, 890, 893, 1064, 1359
GsaI CCCAGC 2 cut(s) 537, 985
GsuI CTGGAG 1 cut(s) 482
HaeIII GGCC 6 cut(s) 147, 205, 267, 371, 1308, 1744
HapII CCGG 5 cut(s) 144, 229, 274, 301, 368
HgaI GACGC 2 cut(s) 263, 612
Hin1I GRCGYC 1 cut(s) 255
Hin1II CATG 6 cut(s) 196, 292, 830, 1182, 1236, 1400
HindIII AAGCTT 2 cut(s) 686, 833
HinfI GANTC 6 cut(s) 232, 409, 755, 1147, 1615, 1764
HpaII CCGG 5 cut(s) 144, 229, 274, 301, 368
HphI GGTGA 6 cut(s) 10, 664, 764, 922, 1153, 1429
Hpy166II GTNNAC 4 cut(s) 253, 413, 441, 1172
Hpy188I TCNGA 5 cut(s) 637, 702, 1003, 1146, 1188
Hpy8I GTNNAC 4 cut(s) 253, 413, 441, 1172
Hpy99I CGWCG 2 cut(s) 273, 421
HpyAV CCTTC 6 cut(s) 338, 1193, 1418, 1487, 1507, 1636
HpyCH4III ACNGT 7 cut(s) 417, 867, 1114, 1281, 1483, 1547, 1569
HpyCH4IV ACGT 1 cut(s) 1284
HpyCH4V TGCA 8 cut(s) 428, 457, 830, 879, 1063, 1172, 1565, 1612
HpySE526I ACGT 1 cut(s) 1284
Hsp92I GRCGYC 1 cut(s) 255
Hsp92II CATG 6 cut(s) 196, 292, 830, 1182, 1236, 1400
Kpn2I TCCGGA 1 cut(s) 300
Ksp22I TGATCA 2 cut(s) 658, 904
LguI GCTCTTC 3 cut(s) 299, 927, 1208
LmnI GCTCC 1 cut(s) 1329
Lsp1109I GCAGC 6 cut(s) 190, 469, 586, 904, 1075, 1345
LweI GCATC 3 cut(s) 789, 964, 1227
MaeI CTAG 1 cut(s) 776
MaeII ACGT 1 cut(s) 1284
MaeIII GTNAC 4 cut(s) 1126, 1417, 1477, 1541
MboII GAAGA 9 cut(s) 106, 316, 341, 409, 914, 971, 1133, 1225, 1694
MfeI CAATTG 1 cut(s) 513
MflI RGATCY 3 cut(s) 297, 1410, 1632
MhlI GDGCHC 5 cut(s) 94, 454, 610, 988, 1174
MlyI GAGTC 3 cut(s) 418, 1141, 1609
MmeI TCCRAC 4 cut(s) 71, 1479, 1653, 1778
MroI TCCGGA 1 cut(s) 300
MroXI GAANNNNTTC 2 cut(s) 348, 525
MseI TTAA 6 cut(s) 329, 968, 1407, 1442, 1650, 1725
MslI CAYNNNNRTG 3 cut(s) 647, 951, 1177
MspA1I CMGCKG 2 cut(s) 460, 1259
MspI CCGG 5 cut(s) 144, 229, 274, 301, 368
MspR9I CCNGG 5 cut(s) 214, 368, 646, 859, 1719
MunI CAATTG 1 cut(s) 513
MvaI CCWGG 4 cut(s) 214, 646, 859, 1719
MvnI CGCG 3 cut(s) 342, 547, 1054
NciI CCSGG 1 cut(s) 368
NlaIII CATG 6 cut(s) 196, 292, 830, 1182, 1236, 1400
NlaIV GGNNCC 2 cut(s) 793, 1552
NmeAIII GCCGAG 1 cut(s) 283
NmuCI GTSAC 2 cut(s) 1126, 1417
NspI RCATGY 3 cut(s) 196, 830, 1236
OliI CACNNNNGTG 1 cut(s) 647
PaeI GCATGC 2 cut(s) 830, 1236
PaeR7I CTCGAG 1 cut(s) 392
PagI TCATGA 1 cut(s) 1396
PaqCI CACCTGC 1 cut(s) 1031
PciI ACATGT 1 cut(s) 192
PciSI GCTCTTC 3 cut(s) 299, 927, 1208
PcsI WCGNNNNNNNCGW 2 cut(s) 203, 1626
PdmI GAANNNNTTC 2 cut(s) 348, 525
PfeI GAWTC 3 cut(s) 232, 755, 1764
PflFI GACNNNGTC 1 cut(s) 865
PflMI CCANNNNNTGG 1 cut(s) 1760
PkrI GCNGC 8 cut(s) 180, 341, 459, 601, 891, 894, 1065, 1360
PleI GAGTC 3 cut(s) 417, 1141, 1609
PpsI GAGTC 3 cut(s) 417, 1141, 1609
Ppu21I YACGTR 1 cut(s) 1285
PscI ACATGT 1 cut(s) 192
PshAI GACNNNNGTC 1 cut(s) 221
Psp6I CCWGG 4 cut(s) 212, 644, 857, 1717
PspFI CCCAGC 2 cut(s) 533, 981
PspGI CCWGG 4 cut(s) 212, 644, 857, 1717
PspN4I GGNNCC 2 cut(s) 793, 1552
PspPI GGNCC 5 cut(s) 223, 265, 438, 1307, 1742
PstI CTGCAG 2 cut(s) 459, 1614
PsuI RGATCY 3 cut(s) 297, 1410, 1632
PsyI GACNNNGTC 1 cut(s) 865
PvuII CAGCTG 2 cut(s) 460, 1259
RsaI GTAC 4 cut(s) 239, 1009, 1283, 1711
RsaNI GTAC 4 cut(s) 238, 1008, 1282, 1710
RseI CAYNNNNRTG 3 cut(s) 647, 951, 1177
SapI GCTCTTC 3 cut(s) 299, 927, 1208
SaqAI TTAA 6 cut(s) 329, 968, 1407, 1442, 1650, 1725
SatI GCNGC 8 cut(s) 179, 340, 458, 600, 890, 893, 1064, 1359
Sau96I GGNCC 5 cut(s) 223, 265, 438, 1307, 1742
SchI GAGTC 3 cut(s) 418, 1141, 1609
ScrFI CCNGG 5 cut(s) 214, 368, 646, 859, 1719
SduI GDGCHC 5 cut(s) 94, 454, 610, 988, 1174
SfaNI GCATC 3 cut(s) 789, 964, 1227
SfcI CTRYAG 2 cut(s) 455, 1610
Sfr274I CTCGAG 1 cut(s) 392
SinI GGWCC 2 cut(s) 223, 438
SlaI CTCGAG 1 cut(s) 392
SmiMI CAYNNNNRTG 3 cut(s) 647, 951, 1177
SmlI CTYRAG 4 cut(s) 392, 932, 1658, 1746
SmoI CTYRAG 4 cut(s) 392, 932, 1658, 1746
SnaBI TACGTA 1 cut(s) 1285
SphI GCATGC 2 cut(s) 830, 1236
SsiI CCGC 9 cut(s) 103, 120, 226, 248, 340, 545, 890, 1052, 1088
SspI AATATT 2 cut(s) 678, 1123
SspMI CTAG 1 cut(s) 776
StyD4I CCNGG 5 cut(s) 212, 366, 644, 857, 1717
StyI CCWWGG 1 cut(s) 1469
TaaI ACNGT 7 cut(s) 417, 867, 1114, 1281, 1483, 1547, 1569
TaiI ACGT 1 cut(s) 1287
TaqI TCGA 5 cut(s) 80, 294, 393, 419, 1035
TaqII GACCGA 2 cut(s) 23, 39
TauI GCSGC 2 cut(s) 342, 892
TfiI GAWTC 3 cut(s) 232, 755, 1764
Tru1I TTAA 6 cut(s) 329, 968, 1407, 1442, 1650, 1725
Tru9I TTAA 6 cut(s) 329, 968, 1407, 1442, 1650, 1725
TscAI CASTG 5 cut(s) 793, 870, 1117, 1157, 1552
TseFI GTSAC 2 cut(s) 1126, 1417
TseI GCWGC 6 cut(s) 178, 457, 599, 892, 1063, 1358
Tsp45I GTSAC 2 cut(s) 1126, 1417
TspDTI ATGAA 2 cut(s) 935, 972
TspGWI ACGGA 2 cut(s) 121, 127
TspRI CASTG 5 cut(s) 793, 870, 1117, 1157, 1552
Tth111I GACNNNGTC 1 cut(s) 865
Van91I CCANNNNNTGG 1 cut(s) 1760
VneI GTGCAC 1 cut(s) 1170
VpaK11BI GGWCC 2 cut(s) 223, 438
XapI RAATTY 2 cut(s) 1020, 1653
XceI RCATGY 3 cut(s) 196, 830, 1236
XhoI CTCGAG 1 cut(s) 392
XmiI GTMKAC 1 cut(s) 412
XmnI GAANNNNTTC 2 cut(s) 348, 525
XspI CTAG 1 cut(s) 776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.