RLG00000007492

Belongs to the importin alpha family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0008963
Physical Location & Seq
Forward (+)
17508605 .. 17512541
3937 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007492

Sequence Viewer

Length: 1902 bp
ATGTCGCTCAGGCCGAACGCCAGGACTGAGGTCCGCCGGAACCGATACAAGGTGGCGGTGGACGCCGAGGAGGGCCGTCGCCGGAGAGAGGACAACATGGTCGAGATCCGGAAGAGCAAGAGGGAGGAGAGTTTGTTAAAGAAGCGCCGCGAAGGTCTTCAAGCTCAGCAATTCCCGGCCTCTGTTCAGCCACCGAACCTCGAGAAGAAGTTGGAGAGTCTACCGTCGATGGTTGCCGGGGTTTGGTCCACCGAAAGTGCTCTGCAGCTGGAGGCTACTACGCAGTTTCGGAAACTACTTTCTATAGAAAGAAGCCCTCCAATTGAGGAAGTAATTCAAGCTGGGGTTGTTCCGCGATTCGTTGAGTTCCTTGTCAGGGAGGATTATCCACAACTTCAGTTTGAGGCTGCTTGGGCTCTTACAAACATAGCGTCAGGAACATCGGACAACACCAGGGTGGTGATTGATCACGGGGCAGTCCCAATATTCGTGAAGCTTCTTGCTTCTCCGAGTGATGATGTTAGAGAGCAGGCTGTTTGGGCATTGGGAAATGTTGCTGGTGATTCTCCAAGATGTCGTGATCTAGTCCTCAGCAGTGGTGCCTTGATGCCGTTGCTGGCTCAGTTGAATGAGCATGCAAAGCTTTCTATGCTGAGAAATGCCACCTGGACACTGTCAAACTTTTGCAGGGGCAAGCCGCAGCCTCAGTTTGATCAGGTGAAGCCAGCTCTTCCAGCGCTTGAGCGTTTAGTTCATTCCAATGATGAAGAAGTCTTGACAGATGCCTGCTGGGCACTCTCATATCTCTCGGATGGTACAAATGACAAAATTCAAGCAGTCATCGAGGCAGGTGTCTGCCCGCGACTTGTGGAGCTTCTCTTACATCCATCTCCTGCGGTTCTCATTCCTGCACTTCGCACTGTTGGTAATATTGTGACAGGAGATGATCTTCAGACTCAGTGCATAATCACCAATGGTGCACTTCCATGCCTTCTGAGCCTCTTGACACATAATCATAAGAAGAGCATCAAGAAAGAAGCTTGCTGGACTATCTCAAACATTACAGCTGGAAACAGGGAACAGATACAGTACGTAATTGAAGCTGGTTTGATTGGCCCTCTTGTCAATTTGCTCCAAACTGCTGAGTTTGAGATCAAGAAAGAGGCTGCTTGGGCAATTTCAAATGCTACTTCTGGTGGCACTCATGAGCAAATTAAGATCTTGGTGACTGAAGGCTGTATAAAACCATTAAGTGATCTCCTTGTATGCCCTGATCCAAGGATAGTAACTGTCTGCTTAGAAGGGTTGGAGAACATTTTGAAGGTTGGGGAAGCTGAAAAGAGTTTGGGTAACAGTGGAACCAACCTGTATGCACAGTTGATTGATGAGGCTGATGGTCTGGAAAAGATTGAAAATCTTCAGACTCACGACAACAACGAGATCTATGAGAAGGCAGTTAAAATTCTTGAGACATATTGGTTGGAGGACGAAGACGAGACATTACCAGCAGGAGATGGTACTCAGCCAGGCTTTAACTTTGGAGGGAATGGGCCTCAAGTTCCAACTGGAACTTTCAATTGGATGGAGGAGCAGAAGTTTCCTGATATGGGTTATGTTGGGTCAAGTTCAGGTCAAGTCGGGGTGGTCGGGGCATCTCATGTGTCTGGTTTCAGTTTGGTCTGGTGTCCATTGTGGTCAGAGGTGCCAAGGGGGTCGTGTACTATGCTTGACGTGGCCACAAGTTCTGGGTCTGGTGCTCAAGACTGGGCGGATGGAACTATGGGAAAAATTGGAAGGAAACCTTACTGTATAGAAAGTTTGTATTCTGCTCGTTCGATTCTCACCTTTAGGCATCAAGAAGCGTGGCTATTTCGACCTTCCAAGGCCACTTACCCAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Arm Arm_3 IBB

Protein Analysis

634

Amino Acids

69.66

Weight (kDa)

5.27

Isoelectric Point (pI)

47.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IBB PF01749 12 - 94 1.3e-22 Importin beta binding domain
Arm PF00514 105 - 145 4.7e-10 Armadillo/beta-catenin-like repeat
HEAT_EZ PF13513 130 - 185 5.8e-09 HEAT-like repeat
Arm PF00514 148 - 186 2.7e-12 Armadillo/beta-catenin-like repeat
HEAT_2 PF13646 161 - 267 1.9e-06 HEAT repeats
Arm PF00514 189 - 230 3.5e-07 Armadillo/beta-catenin-like repeat
Arm PF00514 243 - 271 4.7e-07 Armadillo/beta-catenin-like repeat
Arm PF00514 274 - 312 3.8e-09 Armadillo/beta-catenin-like repeat
ARM_ARMC5 PF24768 308 - 489 1.5e-08 ARMC5
Arm PF00514 316 - 356 1.2e-09 Armadillo/beta-catenin-like repeat
Arm PF00514 358 - 397 2e-12 Armadillo/beta-catenin-like repeat
Arm_3 PF16186 455 - 499 3.3e-21 Atypical Arm repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0008963)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G32880 AT3G06720 AT3G06720 AT4G16143 AT4G16143
fragaria_vesca FvH4_4g19270 FvH4_4g19270
malus_domestica MD13G1158900.v1.1 MD16G1159100.v1.1
prunus_persica Prupe.1G125900_v2.0.a1
pyrus_communis pycom16g13410
rosa_chinensis RchiOBHm_Chr4g0424261
rosa_laevigata RLG00000007492
rosa_multiflora Rmu_sc0006403.1_g000001
rosa_roxburghii Rroxscaffold_5G00366200
rosa_rugosa Rorug04G0194700 Rorug04G0194800
rosa_samantha Rh4AG252100 Rh4BG257500 Rh4CG268200 Rh4DG251900
rosa_wichuraiana Rw4G021740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 839
AasI GACNNNNNNGTC 1 cut(s) 98
Acc36I ACCTGC 1 cut(s) 839
AccB1I GGYRCC 2 cut(s) 599, 1702
AccI GTMKAC 1 cut(s) 220
AccII CGCG 3 cut(s) 150, 355, 862
AccIII TCCGGA 1 cut(s) 108
AciI CCGC 8 cut(s) 34, 56, 148, 353, 698, 860, 896, 1769
AclWI GGATC 2 cut(s) 100, 1268
AcoI YGGCCR 1 cut(s) 1734
AcsI RAATTY 2 cut(s) 828, 1461
AcuI CTGAAG 4 cut(s) 380, 935, 1251, 1403
AcyI GRCGYC 1 cut(s) 63
AfaI GTAC 4 cut(s) 817, 1091, 1519, 1720
AfeI AGCGCT 1 cut(s) 738
AfiI CCNNNNNNNGG 5 cut(s) 49, 88, 243, 376, 1607
AgsI TTSAA 9 cut(s) 161, 338, 628, 833, 1100, 1182, 1321, 1412, 1576
AjiI CACGTC 1 cut(s) 1732
AjnI CCWGG 4 cut(s) 20, 452, 665, 1525
AjuI GAANNNNNNNTTGG 2 cut(s) 1561, 1593
AleI CACNNNNGTG 1 cut(s) 455
Alw21I GWGCWC 3 cut(s) 262, 982, 1759
Alw26I GTCTC 2 cut(s) 1463, 1490
Alw44I GTGCAC 1 cut(s) 978
AlwI GGATC 2 cut(s) 100, 1268
Ama87I CYCGRG 1 cut(s) 200
Aor13HI TCCGGA 1 cut(s) 108
Aor51HI AGCGCT 1 cut(s) 738
AoxI GGCC 7 cut(s) 11, 73, 177, 1114, 1550, 1734, 1884
ApaLI GTGCAC 1 cut(s) 978
ApeKI GCWGC 4 cut(s) 265, 407, 700, 1166
ApoI RAATTY 2 cut(s) 828, 1461
ArsI GACNNNNNNTTYG 2 cut(s) 416, 448
Asp700I GAANNNNTTC 3 cut(s) 156, 333, 1416
AspLEI GCGC 2 cut(s) 147, 739
AspS9I GGNCC 5 cut(s) 31, 73, 246, 1115, 1550
AsuC2I CCSGG 2 cut(s) 176, 238
AsuHPI GGTGA 6 cut(s) 472, 572, 730, 961, 1237, 1834
AvaI CYCGRG 1 cut(s) 200
AvaII GGWCC 2 cut(s) 31, 246
BaeGI GKGCMC 2 cut(s) 796, 982
BalI TGGCCA 1 cut(s) 1736
BanI GGYRCC 2 cut(s) 599, 1702
BanII GRGCYC 1 cut(s) 418
BbsI GAAGAC 2 cut(s) 149, 1497
Bbv12I GWGCWC 3 cut(s) 262, 982, 1759
BbvCI CCTCAGC 1 cut(s) 590
BbvI GCAGC 4 cut(s) 277, 394, 712, 1153
BccI CCATC 7 cut(s) 223, 806, 895, 1388, 1508, 1576, 1766
BceAI ACGGC 2 cut(s) 60, 595
BciT130I CCWGG 4 cut(s) 22, 454, 667, 1527
BclI TGATCA 2 cut(s) 466, 712
BcnI CCSGG 2 cut(s) 176, 238
BcoDI GTCTC 2 cut(s) 1463, 1490
BfaI CTAG 1 cut(s) 584
BfmI CTRYAG 2 cut(s) 263, 303
BfoI RGCGCY 2 cut(s) 148, 740
BfuAI ACCTGC 1 cut(s) 839
BglI GCCNNNNNGGC 1 cut(s) 791
BglII AGATCT 2 cut(s) 1218, 1440
BisI GCNGC 6 cut(s) 148, 266, 408, 698, 701, 1167
BlpI GCTNAGC 1 cut(s) 165
BlsI GCNGC 6 cut(s) 149, 267, 409, 699, 702, 1168
Bme1390I CCNGG 6 cut(s) 22, 176, 238, 454, 667, 1527
Bme18I GGWCC 2 cut(s) 31, 246
BmeT110I CYCGRG 1 cut(s) 200
BmgBI CACGTC 1 cut(s) 1732
BmgT120I GGNCC 5 cut(s) 31, 73, 246, 1115, 1550
BmiI GGNNCC 4 cut(s) 41, 601, 1360, 1704
BmrFI CCNGG 6 cut(s) 22, 176, 238, 454, 667, 1527
BmrI ACTGGG 1 cut(s) 1774
BmsI GCATC 5 cut(s) 597, 772, 1035, 1661, 1861
BmuI ACTGGG 1 cut(s) 1774
BoxI GACNNNNGTC 1 cut(s) 29
BpiI GAAGAC 2 cut(s) 149, 1497
BpmI CTGGAG 1 cut(s) 290
Bpu10I CCTNAGC 2 cut(s) 8, 590
Bpu1102I GCTNAGC 1 cut(s) 165
BpuEI CTTGAG 4 cut(s) 761, 1487, 1539, 1743
BpuMI CCSGG 2 cut(s) 176, 238
BsaAI YACGTR 1 cut(s) 1093
BsaHI GRCGYC 1 cut(s) 63
BsaJI CCNNGG 6 cut(s) 66, 237, 453, 1277, 1706, 1881
BsaWI WCCGGW 1 cut(s) 108
BsaXI ACNNNNNCTCC 4 cut(s) 119, 149, 1580, 1610
Bsc4I CCNNNNNNNGG 5 cut(s) 49, 88, 243, 376, 1607
Bse1I ACTGG 2 cut(s) 1570, 1769
BseAI TCCGGA 1 cut(s) 108
BseBI CCWGG 4 cut(s) 22, 454, 667, 1527
BseDI CCNNGG 6 cut(s) 66, 237, 453, 1277, 1706, 1881
BseGI GGATG 4 cut(s) 817, 883, 1587, 1777
BseLI CCNNNNNNNGG 5 cut(s) 49, 88, 243, 376, 1607
BseNI ACTGG 2 cut(s) 1570, 1769
BseRI GAGGAG 3 cut(s) 83, 140, 1601
BseSI GKGCMC 2 cut(s) 796, 982
BseXI GCAGC 4 cut(s) 277, 394, 712, 1153
BseYI CCCAGC 2 cut(s) 341, 789
BsgI GTGCAG 1 cut(s) 894
Bsh1236I CGCG 3 cut(s) 150, 355, 862
BshFI GGCC 7 cut(s) 13, 75, 179, 1116, 1552, 1736, 1886
BshNI GGYRCC 2 cut(s) 599, 1702
BsiHKAI GWGCWC 3 cut(s) 262, 982, 1759
BsiHKCI CYCGRG 1 cut(s) 200
BsiSI CCGG 5 cut(s) 37, 82, 109, 176, 237
BslFI GGGAC 1 cut(s) 464
BslI CCNNNNNNNGG 5 cut(s) 49, 88, 243, 376, 1607
BsmAI GTCTC 2 cut(s) 1463, 1490
BsmFI GGGAC 1 cut(s) 464
BsnI GGCC 7 cut(s) 13, 75, 179, 1116, 1552, 1736, 1886
BsoBI CYCGRG 1 cut(s) 200
Bsp1286I GDGCHC 5 cut(s) 262, 418, 796, 982, 1759
Bsp13I TCCGGA 1 cut(s) 108
Bsp1720I GCTNAGC 1 cut(s) 165
BspACI CCGC 8 cut(s) 34, 56, 148, 353, 698, 860, 896, 1769
BspANI GGCC 7 cut(s) 13, 75, 179, 1116, 1552, 1736, 1886
BspEI TCCGGA 1 cut(s) 108
BspFNI CGCG 3 cut(s) 150, 355, 862
BspHI TCATGA 1 cut(s) 1204
BspLI GGNNCC 4 cut(s) 41, 601, 1360, 1704
BspMAI CTGCAG 1 cut(s) 267
BspMI ACCTGC 1 cut(s) 839
BspPI GGATC 2 cut(s) 100, 1268
BspQI GCTCTTC 3 cut(s) 107, 735, 1016
BspT107I GGYRCC 2 cut(s) 599, 1702
BsrI ACTGG 2 cut(s) 1570, 1769
BssECI CCNNGG 6 cut(s) 66, 237, 453, 1277, 1706, 1881
BssNI GRCGYC 1 cut(s) 63
BssT1I CCWWGG 3 cut(s) 1277, 1706, 1881
Bst2UI CCWGG 4 cut(s) 22, 454, 667, 1527
Bst4CI ACNGT 8 cut(s) 225, 675, 922, 1089, 1291, 1355, 1377, 1808
Bst6I CTCTTC 3 cut(s) 107, 735, 1016
BstACI GRCGYC 1 cut(s) 63
BstBAI YACGTR 1 cut(s) 1093
BstC8I GCNNGC 8 cut(s) 531, 618, 636, 695, 726, 787, 860, 1042
BstF5I GGATG 4 cut(s) 817, 883, 1587, 1777
BstFNI CGCG 3 cut(s) 150, 355, 862
BstH2I RGCGCY 2 cut(s) 148, 740
BstHHI GCGC 2 cut(s) 147, 739
BstMAI GTCTC 2 cut(s) 1463, 1490
BstMWI GCNNNNNNNGC 9 cut(s) 62, 413, 539, 640, 649, 734, 791, 996, 1172
BstNI CCWGG 4 cut(s) 22, 454, 667, 1527
BstNSI RCATGY 1 cut(s) 638
BstPAI GACNNNNGTC 1 cut(s) 29
BstSCI CCNGG 6 cut(s) 20, 174, 236, 452, 665, 1525
BstSFI CTRYAG 2 cut(s) 263, 303
BstSLI GKGCMC 2 cut(s) 796, 982
BstSNI TACGTA 1 cut(s) 1093
BstUI CGCG 3 cut(s) 150, 355, 862
BstV1I GCAGC 4 cut(s) 277, 394, 712, 1153
BstV2I GAAGAC 2 cut(s) 149, 1497
BstX2I RGATCY 3 cut(s) 105, 1218, 1440
BstYI RGATCY 3 cut(s) 105, 1218, 1440
BsuRI GGCC 7 cut(s) 13, 75, 179, 1116, 1552, 1736, 1886
BtrI CACGTC 1 cut(s) 1732
BtsCI GGATG 4 cut(s) 817, 883, 1587, 1777
BtsI GCAGTG 1 cut(s) 601
BtsIMutI CAGTG 5 cut(s) 601, 671, 918, 965, 1360
BveI ACCTGC 1 cut(s) 839
Cac8I GCNNGC 8 cut(s) 531, 618, 636, 695, 726, 787, 860, 1042
CciI TCATGA 1 cut(s) 1204
CfoI GCGC 2 cut(s) 147, 739
Cfr13I GGNCC 5 cut(s) 31, 73, 246, 1115, 1550
CseI GACGC 2 cut(s) 71, 420
Csp6I GTAC 4 cut(s) 816, 1090, 1518, 1719
CspCI CAANNNNNGTGG 2 cut(s) 1844, 1879
CviAII CATG 5 cut(s) 97, 635, 987, 1205, 1658
CviQI GTAC 4 cut(s) 816, 1090, 1518, 1719
DrdI GACNNNNNNGTC 1 cut(s) 98
DseDI GACNNNNNNGTC 1 cut(s) 98
EaeI YGGCCR 1 cut(s) 1734
Eam1104I CTCTTC 3 cut(s) 107, 735, 1016
EarI CTCTTC 3 cut(s) 107, 735, 1016
EciI GGCGGA 2 cut(s) 23, 1784
Eco105I TACGTA 1 cut(s) 1093
Eco130I CCWWGG 3 cut(s) 1277, 1706, 1881
Eco24I GRGCYC 1 cut(s) 418
Eco47I GGWCC 2 cut(s) 31, 246
Eco47III AGCGCT 1 cut(s) 738
Eco57I CTGAAG 4 cut(s) 380, 935, 1251, 1403
Eco88I CYCGRG 1 cut(s) 200
EcoRII CCWGG 4 cut(s) 20, 452, 665, 1525
EcoT14I CCWWGG 3 cut(s) 1277, 1706, 1881
EcoT38I GRGCYC 1 cut(s) 418
ErhI CCWWGG 3 cut(s) 1277, 1706, 1881
FaeI CATG 5 cut(s) 100, 638, 990, 1208, 1661
FalI AAGNNNNNCTT 2 cut(s) 1786, 1818
FaqI GGGAC 1 cut(s) 464
FatI CATG 5 cut(s) 96, 634, 986, 1204, 1657
FauI CCCGC 1 cut(s) 867
FbaI TGATCA 2 cut(s) 466, 712
FblI GTMKAC 1 cut(s) 220
Fnu4HI GCNGC 6 cut(s) 148, 266, 408, 698, 701, 1167
FokI GGATG 4 cut(s) 824, 870, 1594, 1784
FriOI GRGCYC 1 cut(s) 418
Fsp4HI GCNGC 6 cut(s) 148, 266, 408, 698, 701, 1167
FspBI CTAG 1 cut(s) 584
GlaI GCGC 2 cut(s) 146, 738
GluI GCNGC 6 cut(s) 148, 266, 408, 698, 701, 1167
GsaI CCCAGC 2 cut(s) 345, 793
GsuI CTGGAG 1 cut(s) 290
HaeII RGCGCY 2 cut(s) 148, 740
HaeIII GGCC 7 cut(s) 13, 75, 179, 1116, 1552, 1736, 1886
HapII CCGG 5 cut(s) 37, 82, 109, 176, 237
HgaI GACGC 2 cut(s) 71, 420
HhaI GCGC 2 cut(s) 147, 739
Hin1I GRCGYC 1 cut(s) 63
Hin1II CATG 5 cut(s) 100, 638, 990, 1208, 1661
Hin6I GCGC 2 cut(s) 145, 737
HinP1I GCGC 2 cut(s) 145, 737
HindIII AAGCTT 3 cut(s) 494, 641, 1038
HinfI GANTC 6 cut(s) 217, 357, 563, 955, 1423, 1837
HpaII CCGG 5 cut(s) 37, 82, 109, 176, 237
HphI GGTGA 6 cut(s) 472, 572, 730, 961, 1237, 1834
Hpy166II GTNNAC 5 cut(s) 61, 221, 249, 980, 1719
Hpy188I TCNGA 8 cut(s) 291, 445, 510, 811, 954, 996, 1422, 1699
Hpy8I GTNNAC 5 cut(s) 61, 221, 249, 980, 1719
Hpy99I CGWCG 2 cut(s) 81, 229
HpyAV CCTTC 8 cut(s) 146, 1001, 1226, 1295, 1315, 1444, 1788, 1887
HpyCH4III ACNGT 8 cut(s) 225, 675, 922, 1089, 1291, 1355, 1377, 1808
HpyCH4IV ACGT 2 cut(s) 1092, 1731
HpyCH4V TGCA 7 cut(s) 265, 638, 687, 911, 963, 980, 1373
HpyF10VI GCNNNNNNNGC 9 cut(s) 62, 413, 539, 640, 649, 734, 791, 996, 1172
HpySE526I ACGT 2 cut(s) 1092, 1731
Hsp92I GRCGYC 1 cut(s) 63
Hsp92II CATG 5 cut(s) 100, 638, 990, 1208, 1661
HspAI GCGC 2 cut(s) 145, 737
Kpn2I TCCGGA 1 cut(s) 108
Ksp22I TGATCA 2 cut(s) 466, 712
LguI GCTCTTC 3 cut(s) 107, 735, 1016
LmnI GCTCC 3 cut(s) 871, 1137, 1588
Lsp1109I GCAGC 4 cut(s) 277, 394, 712, 1153
LweI GCATC 5 cut(s) 597, 772, 1035, 1661, 1861
MaeI CTAG 1 cut(s) 584
MaeII ACGT 2 cut(s) 1092, 1731
MaeIII GTNAC 4 cut(s) 934, 1225, 1285, 1349
MboII GAAGA 9 cut(s) 124, 149, 217, 722, 779, 941, 1033, 1409, 1502
MfeI CAATTG 2 cut(s) 321, 1576
MflI RGATCY 3 cut(s) 105, 1218, 1440
MhlI GDGCHC 5 cut(s) 262, 418, 796, 982, 1759
MlsI TGGCCA 1 cut(s) 1736
MluNI TGGCCA 1 cut(s) 1736
MlyI GAGTC 3 cut(s) 226, 949, 1417
MmeI TCCRAC 4 cut(s) 192, 1287, 1461, 1586
Mox20I TGGCCA 1 cut(s) 1736
MroI TCCGGA 1 cut(s) 108
MroXI GAANNNNTTC 3 cut(s) 156, 333, 1416
MscI TGGCCA 1 cut(s) 1736
MseI TTAA 5 cut(s) 137, 1215, 1250, 1458, 1533
MslI CAYNNNNRTG 3 cut(s) 455, 759, 985
Msp20I TGGCCA 1 cut(s) 1736
MspA1I CMGCKG 2 cut(s) 268, 1067
MspI CCGG 5 cut(s) 37, 82, 109, 176, 237
MspR9I CCNGG 6 cut(s) 22, 176, 238, 454, 667, 1527
MunI CAATTG 2 cut(s) 321, 1576
MvaI CCWGG 4 cut(s) 22, 454, 667, 1527
MvnI CGCG 3 cut(s) 150, 355, 862
MwoI GCNNNNNNNGC 9 cut(s) 62, 413, 539, 640, 649, 734, 791, 996, 1172
NciI CCSGG 2 cut(s) 176, 238
NlaIII CATG 5 cut(s) 100, 638, 990, 1208, 1661
NlaIV GGNNCC 4 cut(s) 41, 601, 1360, 1704
NmeAIII GCCGAG 1 cut(s) 91
NmuCI GTSAC 2 cut(s) 934, 1225
NspI RCATGY 1 cut(s) 638
OliI CACNNNNGTG 1 cut(s) 455
PaeI GCATGC 1 cut(s) 638
PaeR7I CTCGAG 1 cut(s) 200
PagI TCATGA 1 cut(s) 1204
PaqCI CACCTGC 1 cut(s) 839
PciSI GCTCTTC 3 cut(s) 107, 735, 1016
PcsI WCGNNNNNNNCGW 2 cut(s) 11, 1434
PdmI GAANNNNTTC 3 cut(s) 156, 333, 1416
PfeI GAWTC 3 cut(s) 357, 563, 1837
PflFI GACNNNGTC 1 cut(s) 673
PkrI GCNGC 6 cut(s) 149, 267, 409, 699, 702, 1168
PleI GAGTC 3 cut(s) 225, 949, 1417
PpsI GAGTC 3 cut(s) 225, 949, 1417
Ppu21I YACGTR 1 cut(s) 1093
PshAI GACNNNNGTC 1 cut(s) 29
Psp6I CCWGG 4 cut(s) 20, 452, 665, 1525
PspFI CCCAGC 2 cut(s) 341, 789
PspGI CCWGG 4 cut(s) 20, 452, 665, 1525
PspN4I GGNNCC 4 cut(s) 41, 601, 1360, 1704
PspPI GGNCC 5 cut(s) 31, 73, 246, 1115, 1550
PstI CTGCAG 1 cut(s) 267
PsuI RGATCY 3 cut(s) 105, 1218, 1440
PsyI GACNNNGTC 1 cut(s) 673
PvuII CAGCTG 2 cut(s) 268, 1067
RsaI GTAC 4 cut(s) 817, 1091, 1519, 1720
RsaNI GTAC 4 cut(s) 816, 1090, 1518, 1719
RseI CAYNNNNRTG 3 cut(s) 455, 759, 985
SapI GCTCTTC 3 cut(s) 107, 735, 1016
SaqAI TTAA 5 cut(s) 137, 1215, 1250, 1458, 1533
SatI GCNGC 6 cut(s) 148, 266, 408, 698, 701, 1167
Sau96I GGNCC 5 cut(s) 31, 73, 246, 1115, 1550
SchI GAGTC 3 cut(s) 226, 949, 1417
ScrFI CCNGG 6 cut(s) 22, 176, 238, 454, 667, 1527
SduI GDGCHC 5 cut(s) 262, 418, 796, 982, 1759
SfaNI GCATC 5 cut(s) 597, 772, 1035, 1661, 1861
SfcI CTRYAG 2 cut(s) 263, 303
Sfr274I CTCGAG 1 cut(s) 200
SinI GGWCC 2 cut(s) 31, 246
SlaI CTCGAG 1 cut(s) 200
SmiMI CAYNNNNRTG 3 cut(s) 455, 759, 985
SmlI CTYRAG 5 cut(s) 200, 740, 1466, 1554, 1758
SmoI CTYRAG 5 cut(s) 200, 740, 1466, 1554, 1758
SnaBI TACGTA 1 cut(s) 1093
SphI GCATGC 1 cut(s) 638
SsiI CCGC 8 cut(s) 34, 56, 148, 353, 698, 860, 896, 1769
SspI AATATT 2 cut(s) 486, 931
SspMI CTAG 1 cut(s) 584
StyD4I CCNGG 6 cut(s) 20, 174, 236, 452, 665, 1525
StyI CCWWGG 3 cut(s) 1277, 1706, 1881
TaaI ACNGT 8 cut(s) 225, 675, 922, 1089, 1291, 1355, 1377, 1808
TaiI ACGT 2 cut(s) 1095, 1734
TaqI TCGA 6 cut(s) 102, 201, 227, 843, 1835, 1873
TatI WGTACW 1 cut(s) 1718
TauI GCSGC 2 cut(s) 150, 700
TfiI GAWTC 3 cut(s) 357, 563, 1837
Tru1I TTAA 5 cut(s) 137, 1215, 1250, 1458, 1533
Tru9I TTAA 5 cut(s) 137, 1215, 1250, 1458, 1533
TscAI CASTG 5 cut(s) 601, 678, 925, 965, 1360
TseFI GTSAC 2 cut(s) 934, 1225
TseI GCWGC 4 cut(s) 265, 407, 700, 1166
Tsp45I GTSAC 2 cut(s) 934, 1225
TspDTI ATGAA 2 cut(s) 743, 780
TspRI CASTG 5 cut(s) 601, 678, 925, 965, 1360
Tth111I GACNNNGTC 1 cut(s) 673
VneI GTGCAC 1 cut(s) 978
VpaK11BI GGWCC 2 cut(s) 31, 246
XapI RAATTY 2 cut(s) 828, 1461
XceI RCATGY 1 cut(s) 638
XhoI CTCGAG 1 cut(s) 200
XmiI GTMKAC 1 cut(s) 220
XmnI GAANNNNTTC 3 cut(s) 156, 333, 1416
XspI CTAG 1 cut(s) 584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.