FvH4_4g19640

Cell division control protein 24, OB domain 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0014037
Physical Location & Seq
Forward (+)
23223039 .. 23226874
3836 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g19640.t1

Sequence Viewer

Length: 1992 bp
ATGAACTCAGTCGATCCGCAACCACAAGATGACTCACTCCTCAAATTCATCGACTATGCCAGGTCTGCTCTCTCCCCTGAAGCCGACGAAGATCCGGATCCGAACGGAAACGGATCGGAGACCGCCCGGCCCAGCTGGAATTGGATCGTTTCTCGGATTCTCAAGACCTGCAGCGCCTACTCTAGCGGCGTTACGGCCGCGATTCTGCTCTCCGATCTCTCCCAGGCATGGCATGAGCAAAATAGGGACCGGCCGATGAAGAAGATGCCAGAATGCGTGAGGGAGTTGCGAAAGAAGCATAAGCGGAGGAAGCTTCCGAATACTGTGACTATTGATTCCATTTATGAGAAGAATTTCTTGTCATTGAAAAGTGTTTTGGAGGCGGTTATTGTCGACGTTTATGTTCTCCCCGGCACCAAGATTTATATGCTTTCCCTGGGGGATTTTTGGAGCACCAATACCATTGATCTTTATCTCCACCAAAAGTACTATGACTTGATAAATCCCACTAATGGGATTCTCAACAAAGGAAGGCAGATCTTCCTCACAGGGTGCTATCTTCGTGCTTCTGGAGGAGGGTCTCGCTGTCCGCGGTTGTTGCCAACAGAATATCTTGTAGTATTGTTAGATGAGGATGATGATGCTGATGCAATGCTGCTAGCAGCTCAGTTTTGTTCAGATACATTCTCTTCAGTTTCTCTTGATGCATTTAGTAAAAATGTTTATTATTCATTGTACGCAAGAATTGAGCACATTGGCCCCCTGGAAGTTCTAGGAGAGTCTGGAACTTTACAAAGGAAACAAATCACTCTGGTAGATGACGATGGTACCAAGTTACAGTTTGTGCTGTGGGGTGAACAGGTTGTCCTGACAAATCTTTTGAGCTTGGGAAGTATGCTTGCACTGGATAAACCATATATTGCAAGTTCAGCAGACAATGCTGCTGGAACAAGTGCTGAAGTTTCCCTTGAATTCGGTAGTGCAACACAATTGTTTTTGGTCCCTGTTGTTCAACACAAGGAACAATTATGTATAGCACTGAGACCAAATCGCCGTCAAGGATCAAGACTGCTAAGCACAATAGATCCTAGTCAGAGTACACAAGTTTCTCAAGTTTCCTTGCCCTGTGATTCACATGGGTCTATTGATTTCAGTAGTTATCCTTTTCAATCCTATGTTTCCGATCTTCGTGACAAGATGACAGGCGTCAGCCTTTATGGTGTTGTTACAAGTATCATCAAAGAAAGATGTACCACAGAAGCTATCTTCTCATTGAAAATCGAAGATACCAGTGGAGCAATTTGGACTAGATTACATTTTGTGAAATACTGGTCACTGGGAAGATTAAGCCTTGGCCACACAGTCTACATATCAGGTCTGACATGCTCTATGACGAAGCGGAAGGGGTTCCAGCTAAACAGATGCCACAACAGTCTAGAAGCAATATGGTCCGAGAATACTGGTGGAGCTTCTTTCTTCAACCTCAGTTGCTTGCCAGCGTTGCTAAACTCATCCTGTCTTCATAAACTAACAAAGCTCTCTGATCTCTCCAGCCAGACTACCTGTACTCAGATAGTTCACATTCGGCTAGAAATGGCTCAATTTCATCTCAGTACAAGGTTTTCACATGCTGTATGTGGTCATTTGGTTACTGAGCAACCCATGGGAGTTTCTGAATGCAGCTTCTGTAATGAGAATTGTGATGAAGTAGTTCGCACTTTCCACCTGAAAGTGACCCTTGCTGATAAGAGTGGGAAAGTTTTAGCATGGTGTACTGGCCATACTGCTACAGAGATCCTGCAAATCTCTCCTGACGAATTCTTCAAACTACCTGAGGAAGAACAATTTATGTATCCCTCTTCATTACATAATGAGAGGTTCAAGGTGGCAATTGTTAATTGCAATAGAGAAGGTTCTGGATCTGGCGATGCTCTTGTGCTAGAAACTGAGGGAACCTCATGGGAGATTACTCGTGCATTGAAGTGTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CDC24_OB1 CDC24_OB2 CDC24_OB3

Protein Analysis

664

Amino Acids

73.81

Weight (kDa)

5.83

Isoelectric Point (pI)

41.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CDC24_OB1 PF17246 14 - 140 4e-46 Cell division control protein 24, OB domain 1
CDC24_OB2 PF17245 146 - 274 2.6e-46 Cell division control protein 24, OB domain 2
CDC24_OB3 PF17244 395 - 622 1.6e-77 Cell division control protein 24, OB domain 3
Rep_fac-A_C PF08646 544 - 634 9.6e-06 Replication factor-A C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014037)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17030
fragaria_vesca FvH4_4g19640
malus_domestica MD13G1155000.v1.1
prunus_persica Prupe.1G118000_v2.0.a1
pyrus_communis pycom13g13180
rosa_chinensis RchiOBHm_Chr4g0424901 RchiOBHm_Chr4g0424931
rosa_laevigata RLG00000007411
rosa_multiflora Rmu_sc0006754.1_g000002 Rmu_ssc0000420.1_g000005
rosa_roxburghii Rroxscaffold_5G00367120
rosa_rugosa Rorug04G0200500
rosa_samantha Rh4AG257900 Rh4BG263300 Rh4CG274300 Rh4DG259000
rosa_wichuraiana Rw4G022260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 176
Acc65I GGTACC 1 cut(s) 827
AccB1I GGYRCC 2 cut(s) 413, 827
AccI GTMKAC 2 cut(s) 393, 1365
AccII CGCG 2 cut(s) 200, 592
AccIII TCCGGA 1 cut(s) 94
AciI CCGC 9 cut(s) 17, 123, 186, 198, 304, 383, 590, 592, 1399
AcoI YGGCCR 4 cut(s) 195, 251, 1354, 1777
AcsI RAATTY 4 cut(s) 44, 352, 971, 1817
AcuI CTGAAG 3 cut(s) 99, 675, 978
AcyI GRCGYC 1 cut(s) 1206
AdeI CACNNNGTG 1 cut(s) 552
AfaI GTAC 8 cut(s) 488, 737, 829, 1099, 1252, 1567, 1615, 1774
AfiI CCNNNNNNNGG 3 cut(s) 228, 512, 513
AgsI TTSAA 9 cut(s) 367, 971, 1013, 1169, 1276, 1480, 1825, 1882, 1981
AjnI CCWGG 4 cut(s) 59, 222, 435, 762
AjuI GAANNNNNNNTTGG 2 cut(s) 359, 391
AloI GAACNNNNNNTCC 2 cut(s) 849, 881
AluBI AGCT 9 cut(s) 135, 313, 665, 885, 1262, 1414, 1469, 1537, 1683
AluI AGCT 9 cut(s) 135, 313, 665, 885, 1262, 1414, 1469, 1537, 1683
Alw21I GWGCWC 2 cut(s) 455, 753
Alw26I GTCTC 3 cut(s) 113, 585, 1036
AlwNI CAGNNNCTG 1 cut(s) 1686
Aor13HI TCCGGA 1 cut(s) 94
AoxI GGCC 6 cut(s) 128, 195, 251, 757, 1354, 1777
ApeKI GCWGC 5 cut(s) 171, 655, 662, 941, 1680
ApoI RAATTY 4 cut(s) 44, 352, 971, 1817
ArsI GACNNNNNNTTYG 2 cut(s) 862, 894
Asp700I GAANNNNTTC 3 cut(s) 353, 1406, 1710
Asp718I GGTACC 1 cut(s) 827
AspLEI GCGC 1 cut(s) 176
AspS9I GGNCC 5 cut(s) 129, 247, 758, 1000, 1449
AsuC2I CCSGG 2 cut(s) 127, 411
AsuHPI GGTGA 1 cut(s) 866
AsuNHI GCTAGC 1 cut(s) 658
AvaII GGWCC 3 cut(s) 247, 1000, 1449
AxyI CCTNAGG 1 cut(s) 1833
BaeI ACNNNNGTAYC 2 cut(s) 811, 844
BalI TGGCCA 2 cut(s) 1356, 1779
BamHI GGATCC 1 cut(s) 97
BanI GGYRCC 2 cut(s) 413, 827
BauI CACGAG 1 cut(s) 1971
BbsI GAAGAC 1 cut(s) 1511
Bbv12I GWGCWC 2 cut(s) 455, 753
BbvI GCAGC 5 cut(s) 183, 642, 674, 928, 1692
BccI CCATC 1 cut(s) 818
BceAI ACGGC 2 cut(s) 210, 1038
BciT130I CCWGG 4 cut(s) 61, 224, 437, 764
BciVI GTATCC 1 cut(s) 1863
BcnI CCSGG 2 cut(s) 127, 411
BcoDI GTCTC 3 cut(s) 113, 585, 1036
BfaI CTAG 8 cut(s) 183, 659, 773, 1089, 1308, 1436, 1589, 1940
BfmI CTRYAG 2 cut(s) 169, 1788
BfoI RGCGCY 1 cut(s) 177
BfuAI ACCTGC 1 cut(s) 176
BfuI GTATCC 1 cut(s) 1863
BglII AGATCT 1 cut(s) 537
BisI GCNGC 7 cut(s) 172, 187, 198, 656, 663, 942, 1681
BlpI GCTNAGC 1 cut(s) 1073
BlsI GCNGC 7 cut(s) 173, 188, 199, 657, 664, 943, 1682
BmcAI AGTACT 1 cut(s) 488
Bme1390I CCNGG 6 cut(s) 61, 127, 224, 411, 437, 764
Bme18I GGWCC 3 cut(s) 247, 1000, 1449
BmgT120I GGNCC 5 cut(s) 129, 247, 758, 1000, 1449
BmiI GGNNCC 8 cut(s) 99, 248, 415, 760, 829, 1002, 1409, 1954
BmrFI CCNGG 6 cut(s) 61, 127, 224, 411, 437, 764
BmrI ACTGGG 1 cut(s) 1346
BmsI GCATC 6 cut(s) 255, 631, 637, 694, 1412, 1918
BmtI GCTAGC 1 cut(s) 662
BmuI ACTGGG 1 cut(s) 1346
BoxI GACNNNNGTC 1 cut(s) 1205
BpiI GAAGAC 1 cut(s) 1511
BplI GAGNNNNNCTC 2 cut(s) 1940, 1972
BpmI CTGGAG 2 cut(s) 591, 1534
Bpu1102I GCTNAGC 1 cut(s) 1073
BpuEI CTTGAG 2 cut(s) 146, 1095
BpuMI CCSGG 2 cut(s) 127, 411
BsaBI GATNNNNATC 2 cut(s) 96, 471
BsaHI GRCGYC 1 cut(s) 1206
BsaI GGTCTC 3 cut(s) 113, 585, 1036
BsaJI CCNNGG 8 cut(s) 222, 409, 435, 436, 590, 762, 1351, 1662
BsaWI WCCGGW 1 cut(s) 94
Bsc4I CCNNNNNNNGG 3 cut(s) 228, 512, 513
Bse118I RCCGGY 1 cut(s) 249
Bse1I ACTGG 6 cut(s) 909, 1290, 1334, 1341, 1465, 1780
Bse21I CCTNAGG 1 cut(s) 1833
Bse3DI GCAATG 1 cut(s) 657
Bse8I GATNNNNATC 2 cut(s) 96, 471
BseAI TCCGGA 1 cut(s) 94
BseBI CCWGG 4 cut(s) 61, 224, 437, 764
BseDI CCNNGG 8 cut(s) 222, 409, 435, 436, 590, 762, 1351, 1662
BseGI GGATG 2 cut(s) 640, 1511
BseJI GATNNNNATC 2 cut(s) 96, 471
BseLI CCNNNNNNNGG 3 cut(s) 228, 512, 513
BseMI GCAATG 1 cut(s) 657
BseMII CTCAG 9 cut(s) 21, 680, 1031, 1498, 1583, 1624, 1644, 1824, 1938
BseNI ACTGG 6 cut(s) 909, 1290, 1334, 1341, 1465, 1780
BseRI GAGGAG 2 cut(s) 29, 588
BseX3I CGGCCG 2 cut(s) 195, 251
BseXI GCAGC 5 cut(s) 183, 642, 674, 928, 1692
BseYI CCCAGC 1 cut(s) 131
Bsh1236I CGCG 2 cut(s) 200, 592
Bsh1285I CGRYCG 2 cut(s) 198, 254
BshFI GGCC 6 cut(s) 130, 197, 253, 759, 1356, 1779
BshNI GGYRCC 2 cut(s) 413, 827
BsiEI CGRYCG 2 cut(s) 198, 254
BsiHKAI GWGCWC 2 cut(s) 455, 753
BsiSI CCGG 4 cut(s) 95, 127, 250, 411
BslFI GGGAC 2 cut(s) 260, 986
BslI CCNNNNNNNGG 3 cut(s) 228, 512, 513
BsmAI GTCTC 3 cut(s) 113, 585, 1036
BsmFI GGGAC 2 cut(s) 260, 986
BsmI GAATGC 2 cut(s) 278, 1682
BsnI GGCC 6 cut(s) 130, 197, 253, 759, 1356, 1779
Bso31I GGTCTC 3 cut(s) 113, 585, 1036
Bsp1286I GDGCHC 2 cut(s) 455, 753
Bsp13I TCCGGA 1 cut(s) 94
Bsp1720I GCTNAGC 1 cut(s) 1073
Bsp19I CCATGG 1 cut(s) 1662
BspACI CCGC 9 cut(s) 17, 123, 186, 198, 304, 383, 590, 592, 1399
BspANI GGCC 6 cut(s) 130, 197, 253, 759, 1356, 1779
BspCNI CTCAG 9 cut(s) 20, 679, 1032, 1497, 1582, 1623, 1645, 1825, 1939
BspEI TCCGGA 1 cut(s) 94
BspFNI CGCG 2 cut(s) 200, 592
BspLI GGNNCC 8 cut(s) 99, 248, 415, 760, 829, 1002, 1409, 1954
BspMAI CTGCAG 1 cut(s) 173
BspMI ACCTGC 1 cut(s) 176
BspOI GCTAGC 1 cut(s) 662
BspT107I GGYRCC 2 cut(s) 413, 827
BspTNI GGTCTC 3 cut(s) 113, 585, 1036
BsrDI GCAATG 1 cut(s) 657
BsrFI RCCGGY 1 cut(s) 249
BsrI ACTGG 6 cut(s) 909, 1290, 1334, 1341, 1465, 1780
BssAI RCCGGY 1 cut(s) 249
BssECI CCNNGG 8 cut(s) 222, 409, 435, 436, 590, 762, 1351, 1662
BssNI GRCGYC 1 cut(s) 1206
BssSI CACGAG 1 cut(s) 1971
BssT1I CCWWGG 2 cut(s) 1351, 1662
Bst2BI CACGAG 1 cut(s) 1971
Bst2UI CCWGG 4 cut(s) 61, 224, 437, 764
Bst4CI ACNGT 4 cut(s) 325, 840, 1363, 1433
Bst6I CTCTTC 2 cut(s) 694, 1864
BstACI GRCGYC 1 cut(s) 1206
BstAPI GCANNNNNTGC 1 cut(s) 938
BstC8I GCNNGC 4 cut(s) 660, 900, 1493, 1497
BstDSI CCRYGG 2 cut(s) 590, 1662
BstF5I GGATG 2 cut(s) 640, 1511
BstFNI CGCG 2 cut(s) 200, 592
BstH2I RGCGCY 1 cut(s) 177
BstHHI GCGC 1 cut(s) 176
BstMAI GTCTC 3 cut(s) 113, 585, 1036
BstMCI CGRYCG 2 cut(s) 198, 254
BstMWI GCNNNNNNNGC 7 cut(s) 65, 295, 310, 598, 929, 938, 1501
BstNI CCWGG 4 cut(s) 61, 224, 437, 764
BstNSI RCATGY 2 cut(s) 1386, 1631
BstPAI GACNNNNGTC 1 cut(s) 1205
BstSCI CCNGG 6 cut(s) 59, 125, 222, 409, 435, 762
BstSFI CTRYAG 2 cut(s) 169, 1788
BstUI CGCG 2 cut(s) 200, 592
BstV1I GCAGC 5 cut(s) 183, 642, 674, 928, 1692
BstV2I GAAGAC 1 cut(s) 1511
BstX2I RGATCY 6 cut(s) 91, 97, 537, 1084, 1794, 1919
BstYI RGATCY 6 cut(s) 91, 97, 537, 1084, 1794, 1919
BstZI CGGCCG 2 cut(s) 195, 251
Bsu36I CCTNAGG 1 cut(s) 1833
BsuI GTATCC 1 cut(s) 1863
BsuRI GGCC 6 cut(s) 130, 197, 253, 759, 1356, 1779
BtgI CCRYGG 2 cut(s) 590, 1662
BtgZI GCGATG 1 cut(s) 1941
BtsCI GGATG 2 cut(s) 640, 1511
BtsIMutI CAGTG 4 cut(s) 902, 1037, 1297, 1334
BveI ACCTGC 1 cut(s) 176
Cac8I GCNNGC 4 cut(s) 660, 900, 1493, 1497
CaiI CAGNNNCTG 1 cut(s) 1686
CfoI GCGC 1 cut(s) 176
Cfr10I RCCGGY 1 cut(s) 249
Cfr13I GGNCC 5 cut(s) 129, 247, 758, 1000, 1449
Cfr42I CCGCGG 1 cut(s) 593
CseI GACGC 1 cut(s) 1195
Csp6I GTAC 8 cut(s) 487, 736, 828, 1098, 1251, 1566, 1614, 1773
CviAII CATG 8 cut(s) 228, 233, 1136, 1383, 1628, 1663, 1767, 1959
CviQI GTAC 8 cut(s) 487, 736, 828, 1098, 1251, 1566, 1614, 1773
DraIII CACNNNGTG 1 cut(s) 552
EaeI YGGCCR 4 cut(s) 195, 251, 1354, 1777
EagI CGGCCG 2 cut(s) 195, 251
Eam1104I CTCTTC 2 cut(s) 694, 1864
EarI CTCTTC 2 cut(s) 694, 1864
EclXI CGGCCG 2 cut(s) 195, 251
Eco130I CCWWGG 2 cut(s) 1351, 1662
Eco31I GGTCTC 3 cut(s) 113, 585, 1036
Eco47I GGWCC 3 cut(s) 247, 1000, 1449
Eco52I CGGCCG 2 cut(s) 195, 251
Eco57I CTGAAG 3 cut(s) 99, 675, 978
Eco81I CCTNAGG 1 cut(s) 1833
EcoRI GAATTC 2 cut(s) 971, 1817
EcoRII CCWGG 4 cut(s) 59, 222, 435, 762
EcoT14I CCWWGG 2 cut(s) 1351, 1662
EcoT22I ATGCAT 1 cut(s) 709
ErhI CCWWGG 2 cut(s) 1351, 1662
FaeI CATG 8 cut(s) 231, 236, 1139, 1386, 1631, 1666, 1770, 1962
FalI AAGNNNNNCTT 6 cut(s) 341, 373, 951, 983, 1722, 1754
FaqI GGGAC 2 cut(s) 260, 986
FatI CATG 8 cut(s) 227, 232, 1135, 1382, 1627, 1662, 1766, 1958
FblI GTMKAC 2 cut(s) 393, 1365
Fnu4HI GCNGC 7 cut(s) 172, 187, 198, 656, 663, 942, 1681
FokI GGATG 2 cut(s) 647, 1498
Fsp4HI GCNGC 7 cut(s) 172, 187, 198, 656, 663, 942, 1681
FspBI CTAG 8 cut(s) 183, 659, 773, 1089, 1308, 1436, 1589, 1940
GlaI GCGC 1 cut(s) 175
GluI GCNGC 7 cut(s) 172, 187, 198, 656, 663, 942, 1681
GsaI CCCAGC 1 cut(s) 135
GsuI CTGGAG 2 cut(s) 591, 1534
HaeII RGCGCY 1 cut(s) 177
HaeIII GGCC 6 cut(s) 130, 197, 253, 759, 1356, 1779
HapII CCGG 4 cut(s) 95, 127, 250, 411
HgaI GACGC 1 cut(s) 1195
HhaI GCGC 1 cut(s) 176
Hin1I GRCGYC 1 cut(s) 1206
Hin1II CATG 8 cut(s) 231, 236, 1139, 1386, 1631, 1666, 1770, 1962
Hin6I GCGC 1 cut(s) 174
HinP1I GCGC 1 cut(s) 174
HincII GTYRAC 1 cut(s) 394
HindII GTYRAC 1 cut(s) 394
HindIII AAGCTT 1 cut(s) 311
HinfI GANTC 7 cut(s) 32, 157, 202, 335, 517, 779, 1130
HpaII CCGG 4 cut(s) 95, 127, 250, 411
HphI GGTGA 1 cut(s) 866
Hpy166II GTNNAC 6 cut(s) 394, 857, 1100, 1366, 1579, 1773
Hpy8I GTNNAC 6 cut(s) 394, 857, 1100, 1366, 1579, 1773
Hpy99I CGWCG 2 cut(s) 89, 398
HpyAV CCTTC 3 cut(s) 525, 1396, 1904
HpyCH4III ACNGT 4 cut(s) 325, 840, 1363, 1433
HpyCH4IV ACGT 1 cut(s) 396
HpyF10VI GCNNNNNNNGC 7 cut(s) 65, 295, 310, 598, 929, 938, 1501
HpySE526I ACGT 1 cut(s) 396
Hsp92I GRCGYC 1 cut(s) 1206
Hsp92II CATG 8 cut(s) 231, 236, 1139, 1386, 1631, 1666, 1770, 1962
HspAI GCGC 1 cut(s) 174
Kpn2I TCCGGA 1 cut(s) 94
KpnI GGTACC 1 cut(s) 831
KspI CCGCGG 1 cut(s) 593
LmnI GCTCC 3 cut(s) 450, 1295, 1466
Lsp1109I GCAGC 5 cut(s) 183, 642, 674, 928, 1692
LweI GCATC 6 cut(s) 255, 631, 637, 694, 1412, 1918
MaeI CTAG 8 cut(s) 183, 659, 773, 1089, 1308, 1436, 1589, 1940
MaeII ACGT 1 cut(s) 396
MaeIII GTNAC 8 cut(s) 190, 325, 834, 1190, 1225, 1332, 1648, 1732
MfeI CAATTG 2 cut(s) 989, 1890
MflI RGATCY 6 cut(s) 91, 97, 537, 1084, 1794, 1919
MhlI GDGCHC 2 cut(s) 455, 753
MlsI TGGCCA 2 cut(s) 1356, 1779
MluNI TGGCCA 2 cut(s) 1356, 1779
MlyI GAGTC 2 cut(s) 26, 788
Mox20I TGGCCA 2 cut(s) 1356, 1779
Mph1103I ATGCAT 1 cut(s) 709
MroI TCCGGA 1 cut(s) 94
MroXI GAANNNNTTC 3 cut(s) 353, 1406, 1710
MscI TGGCCA 2 cut(s) 1356, 1779
MseI TTAA 3 cut(s) 1346, 1896, 1990
MslI CAYNNNNRTG 1 cut(s) 1981
Msp20I TGGCCA 2 cut(s) 1356, 1779
MspA1I CMGCKG 2 cut(s) 135, 592
MspI CCGG 4 cut(s) 95, 127, 250, 411
MspR9I CCNGG 6 cut(s) 61, 127, 224, 411, 437, 764
MunI CAATTG 2 cut(s) 989, 1890
Mva1269I GAATGC 2 cut(s) 278, 1682
MvaI CCWGG 4 cut(s) 61, 224, 437, 764
MvnI CGCG 2 cut(s) 200, 592
MwoI GCNNNNNNNGC 7 cut(s) 65, 295, 310, 598, 929, 938, 1501
NciI CCSGG 2 cut(s) 127, 411
NcoI CCATGG 1 cut(s) 1662
NheI GCTAGC 1 cut(s) 658
NlaIII CATG 8 cut(s) 231, 236, 1139, 1386, 1631, 1666, 1770, 1962
NlaIV GGNNCC 8 cut(s) 99, 248, 415, 760, 829, 1002, 1409, 1954
NmuCI GTSAC 4 cut(s) 325, 1190, 1332, 1732
NsiI ATGCAT 1 cut(s) 709
NspI RCATGY 2 cut(s) 1386, 1631
PasI CCCWGGG 1 cut(s) 436
PctI GAATGC 2 cut(s) 278, 1682
PdmI GAANNNNTTC 3 cut(s) 353, 1406, 1710
PfeI GAWTC 5 cut(s) 157, 202, 335, 517, 1130
PkrI GCNGC 7 cut(s) 173, 188, 199, 657, 664, 943, 1682
PleI GAGTC 2 cut(s) 26, 787
PpsI GAGTC 2 cut(s) 26, 787
PshAI GACNNNNGTC 1 cut(s) 1205
Psp6I CCWGG 4 cut(s) 59, 222, 435, 762
PspFI CCCAGC 1 cut(s) 131
PspGI CCWGG 4 cut(s) 59, 222, 435, 762
PspN4I GGNNCC 8 cut(s) 99, 248, 415, 760, 829, 1002, 1409, 1954
PspPI GGNCC 5 cut(s) 129, 247, 758, 1000, 1449
PstI CTGCAG 1 cut(s) 173
PstNI CAGNNNCTG 1 cut(s) 1686
PsuI RGATCY 6 cut(s) 91, 97, 537, 1084, 1794, 1919
PvuII CAGCTG 1 cut(s) 135
RsaI GTAC 8 cut(s) 488, 737, 829, 1099, 1252, 1567, 1615, 1774
RsaNI GTAC 8 cut(s) 487, 736, 828, 1098, 1251, 1566, 1614, 1773
RseI CAYNNNNRTG 1 cut(s) 1981
SacII CCGCGG 1 cut(s) 593
SalI GTCGAC 1 cut(s) 392
SaqAI TTAA 3 cut(s) 1346, 1896, 1990
SatI GCNGC 7 cut(s) 172, 187, 198, 656, 663, 942, 1681
Sau96I GGNCC 5 cut(s) 129, 247, 758, 1000, 1449
ScaI AGTACT 1 cut(s) 488
SchI GAGTC 2 cut(s) 26, 788
ScrFI CCNGG 6 cut(s) 61, 127, 224, 411, 437, 764
SduI GDGCHC 2 cut(s) 455, 753
SfaNI GCATC 6 cut(s) 255, 631, 637, 694, 1412, 1918
SfcI CTRYAG 2 cut(s) 169, 1788
Sfr303I CCGCGG 1 cut(s) 593
SgrBI CCGCGG 1 cut(s) 593
SinI GGWCC 3 cut(s) 247, 1000, 1449
SmiMI CAYNNNNRTG 1 cut(s) 1981
SmlI CTYRAG 2 cut(s) 161, 1110
SmoI CTYRAG 2 cut(s) 161, 1110
SsiI CCGC 9 cut(s) 17, 123, 186, 198, 304, 383, 590, 592, 1399
SspMI CTAG 8 cut(s) 183, 659, 773, 1089, 1308, 1436, 1589, 1940
StyD4I CCNGG 6 cut(s) 59, 125, 222, 409, 435, 762
StyI CCWWGG 2 cut(s) 1351, 1662
TaaI ACNGT 4 cut(s) 325, 840, 1363, 1433
TaiI ACGT 1 cut(s) 399
TaqI TCGA 4 cut(s) 12, 51, 393, 1281
TatI WGTACW 5 cut(s) 486, 1097, 1565, 1613, 1772
TauI GCSGC 2 cut(s) 189, 200
TfiI GAWTC 5 cut(s) 157, 202, 335, 517, 1130
Tru1I TTAA 3 cut(s) 1346, 1896, 1990
Tru9I TTAA 3 cut(s) 1346, 1896, 1990
TscAI CASTG 4 cut(s) 909, 1044, 1297, 1341
TseFI GTSAC 4 cut(s) 325, 1190, 1332, 1732
TseI GCWGC 5 cut(s) 171, 655, 662, 941, 1680
Tsp45I GTSAC 4 cut(s) 325, 1190, 1332, 1732
TspDTI ATGAA 8 cut(s) 17, 37, 272, 720, 1511, 1595, 1719, 1851
TspGWI ACGGA 2 cut(s) 120, 126
TspRI CASTG 4 cut(s) 909, 1044, 1297, 1341
VpaK11BI GGWCC 3 cut(s) 247, 1000, 1449
XapI RAATTY 4 cut(s) 44, 352, 971, 1817
XbaI TCTAGA 1 cut(s) 1435
XceI RCATGY 2 cut(s) 1386, 1631
XmiI GTMKAC 2 cut(s) 393, 1365
XmnI GAANNNNTTC 3 cut(s) 353, 1406, 1710
XspI CTAG 8 cut(s) 183, 659, 773, 1089, 1308, 1436, 1589, 1940
ZrmI AGTACT 1 cut(s) 488
Zsp2I ATGCAT 1 cut(s) 709
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.