RLG00000007411

Cell division control protein 24, OB domain 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0014037
Physical Location & Seq
Reverse (-)
16564050 .. 16567930
3881 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007411

Sequence Viewer

Length: 1956 bp
ATGAACTCACTCGACTCGCCGCAACCACAAGAAGAAGACCCTCTCCTCAAATTCATCGATTACGCCAGGTCCGCTCTCTCCCCTGAAATCGACGAAGATTCGGATCCCAACGGAAATGGAGCGCAGACCGCCCCCCCCAGCTGGAGTTGGATCGGCTCTCGGATTCTCAAGACCTGCAGTGCCTACTCCAGCGGCGTTACGGCCGCGATTTTGCTCTCCGATCTCTCACAGGCATGGCATGAGCAAAATAGGGACAGGCCTGTGAAGAAAATGCCGGAATGCGTGAAGCAATTGCGAAAGAAGAATAAGCGAAGGAAGCTTTCGAACACTGTGACTATTGATTCCATTTACGAGAAGAATTTCTTGTCCTTGAATAGTGTGTTGGAAGCAGTGATTGTCAACGTTTTTGTTCTCCCTGGTAATTTGTTACTTTCGAAAGTTTTTCTGTACTATGACTTGATAAATCCTACTAATGGGATTCTCAAGAAAGGAAGGCAGATCTTCCTCACGGGGTGCCATCTTCGTGCTGCTGCTGGAGGAGGGTCTCGTTGTCCTCGACTGTTGCCAACAGAATATCTAGTGATATTGTTAGATGAGGATGATGATGGTGATGCAATGCTGCTAGGAGCTCAGTTTTGTTCAGATTCATTCTCCTCAATTTCTCTTGATGCATTTAGTAAAAACGTTTCTTATTCATTGTATGCAAGAATTGAGCTCATTGGCCCCCTGGAAGTTCAAGGAAAGTTTGGAACTTTACAAAGGAAACAAATCACTCTTGTAGATGATGATGGTGCCAAGTTGCAATTTCTGCTGTGGGGTGACCAGGTTGTCCTGGCAAATCTTTTCAGTGTGGGAAGTATGCTTGCACTGGATAAACCATATATTGCAAGTTCCGCAGACAGTGCTGCTGAAACAAGTGCTGAAGTTTCCCTTGAATTTGGTAGTGCAACACAATTGTTTTTGGTGCCTTTTGTTCAACACAAGGAACAAGTATGTGTATCACTGACACCAAGCCGCCATCAAGGATCAAGACTGCTAAGCACATTAGATCCCAGTCAGAGTACACAAGTTTCGCAAGTTTCCTTGCCCTGTGATTCACAAGGGTCTATTGATTTTAGTAGTTATCCTTTTCAATCCTACATTACCGATCTTCGTGACAAGATGACAGGCGTCAGCCTTTATGGTGTTGTTACAAGTATCATCAAAGAAAGATGTACCACAGAAGCTATCTTCTCATTGCGAATTGAAGATACCACTGGAACAATTTGGACTAAATTACATTTTGTGAAATATTGGTCACTGGGAAGATTAAGCCTTGGCCACACCGTCTACATATCAGGTCTGACATGCTCTATGAAAAAGCGGAAGGGGTTCCAGCTAAACAGATGCCATGACGGCCTAGAAGCAATATGGTCCGAGAATACTGGTGGAGCTTCTTTCTTCAATCTTAGTAGCTTGCCAGCGCTGCTAAACTCATCTTGTCTTCATAAACTAACAAAGCTCTCTGATCTGTCCAGCCAGACTAGCTGTACTCAGATAGTTCATGTTCAGCTTGAAATGGTTCAATTTCATCTCAGTACAAGGTTGTCACATGCCGTATGTGGTCATTTTGTTACCGAGCAACCCATGGGAGTTTCTAAATGCTGCTTCTGTAATGAGAATTGTGATGAAGTAATTCGCACTTTCCACCTGAAAATGACTCTTGCTGACAAGAGTGGGAAAGTTTTTGCATGGTGTACCGGTCATACTGCTACAGAGATCCTGCAAATATCTCCTGATGAATTCTTTGAACTACCTGAGGAAGAACAAGTTATGTATCCCGCTTCATTAGATAATGAGAGGTTCAAGGTTGCAATTGTTAACTGCAAAAGGCAAGGTTCTGGACCTGGTGATGCTCTGGTGCTAGCAACTGAGGGAATCTCATGGGAGATTACTCGTGCACTGAAGTGCGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CDC24_OB1 CDC24_OB2 CDC24_OB3

Protein Analysis

652

Amino Acids

71.93

Weight (kDa)

5.84

Isoelectric Point (pI)

44.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CDC24_OB1 PF17246 16 - 141 3.5e-44 Cell division control protein 24, OB domain 1
CDC24_OB2 PF17245 150 - 262 1.3e-36 Cell division control protein 24, OB domain 2
CDC24_OB3 PF17244 383 - 610 2.8e-76 Cell division control protein 24, OB domain 3
Rep_fac-A_C PF08646 532 - 623 6.4e-06 Replication factor-A C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014037)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17030
fragaria_vesca FvH4_4g19640
malus_domestica MD13G1155000.v1.1
prunus_persica Prupe.1G118000_v2.0.a1
pyrus_communis pycom13g13180
rosa_chinensis RchiOBHm_Chr4g0424901 RchiOBHm_Chr4g0424931
rosa_laevigata RLG00000007411
rosa_multiflora Rmu_sc0006754.1_g000002 Rmu_ssc0000420.1_g000005
rosa_roxburghii Rroxscaffold_5G00367120
rosa_rugosa Rorug04G0200500
rosa_samantha Rh4AG257900 Rh4BG263300 Rh4CG274300 Rh4DG259000
rosa_wichuraiana Rw4G022260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 827
Acc36I ACCTGC 1 cut(s) 182
AccB1I GGYRCC 3 cut(s) 513, 791, 964
AccBSI CCGCTC 1 cut(s) 74
AccI GTMKAC 1 cut(s) 1329
AccII CGCG 1 cut(s) 206
AciI CCGC 9 cut(s) 20, 72, 129, 192, 204, 894, 1015, 1363, 1821
AclI AACGTT 2 cut(s) 402, 684
AclWI GGATC 6 cut(s) 98, 111, 158, 1033, 1043, 1753
AcoI YGGCCR 2 cut(s) 201, 1318
AcsI RAATTY 4 cut(s) 50, 358, 935, 1781
AcuI CTGAAG 1 cut(s) 942
AcyI GRCGYC 1 cut(s) 1170
AdeI CACNNNGTG 1 cut(s) 513
AfaI GTAC 6 cut(s) 449, 1063, 1216, 1531, 1579, 1738
AfeI AGCGCT 1 cut(s) 1464
AfiI CCNNNNNNNGG 2 cut(s) 141, 473
AgeI ACCGGT 1 cut(s) 1739
AjnI CCWGG 6 cut(s) 65, 415, 726, 822, 831, 1885
AjuI GAANNNNNNNTTGG 2 cut(s) 365, 397
AleI CACNNNNGTG 1 cut(s) 1945
Alw21I GWGCWC 3 cut(s) 631, 717, 1942
Alw26I GTCTC 1 cut(s) 549
Alw44I GTGCAC 1 cut(s) 1938
AlwI GGATC 6 cut(s) 98, 111, 158, 1033, 1043, 1753
Aor51HI AGCGCT 1 cut(s) 1464
AoxI GGCC 5 cut(s) 201, 257, 721, 1318, 1396
ApaLI GTGCAC 1 cut(s) 1938
ApeKI GCWGC 6 cut(s) 527, 530, 619, 905, 1465, 1644
ApoI RAATTY 4 cut(s) 50, 358, 935, 1781
AsiGI ACCGGT 1 cut(s) 1739
Asp700I GAANNNNTTC 4 cut(s) 359, 1370, 1560, 1674
AspLEI GCGC 2 cut(s) 124, 1465
AspS9I GGNCC 4 cut(s) 69, 722, 1413, 1883
AsuHPI GGTGA 3 cut(s) 620, 830, 1901
AsuII TTCGAA 2 cut(s) 323, 434
AsuNHI GCTAGC 1 cut(s) 1903
AvaII GGWCC 3 cut(s) 69, 1413, 1883
AxyI CCTNAGG 1 cut(s) 1797
BaeGI GKGCMC 1 cut(s) 1942
BalI TGGCCA 1 cut(s) 1320
BamHI GGATCC 1 cut(s) 103
BanI GGYRCC 3 cut(s) 513, 791, 964
BanII GRGCYC 2 cut(s) 631, 717
BauI CACGAG 1 cut(s) 1935
BbsI GAAGAC 2 cut(s) 42, 1475
Bbv12I GWGCWC 3 cut(s) 631, 717, 1942
BbvI GCAGC 6 cut(s) 514, 517, 606, 892, 1452, 1631
BccI CCATC 4 cut(s) 525, 599, 782, 1026
BceAI ACGGC 3 cut(s) 216, 1411, 1580
BciT130I CCWGG 6 cut(s) 67, 417, 728, 824, 833, 1887
BciVI GTATCC 1 cut(s) 1827
BcoDI GTCTC 1 cut(s) 549
BfaI CTAG 5 cut(s) 578, 623, 1400, 1524, 1904
BfmI CTRYAG 2 cut(s) 175, 1752
BfoI RGCGCY 1 cut(s) 1466
BfuAI ACCTGC 1 cut(s) 182
BfuI GTATCC 1 cut(s) 1827
BglI GCCNNNNNGGC 1 cut(s) 1395
BglII AGATCT 1 cut(s) 498
BlpI GCTNAGC 1 cut(s) 1037
Bme1390I CCNGG 6 cut(s) 67, 417, 728, 824, 833, 1887
Bme18I GGWCC 3 cut(s) 69, 1413, 1883
BmgT120I GGNCC 4 cut(s) 69, 722, 1413, 1883
BmiI GGNNCC 6 cut(s) 105, 515, 724, 793, 966, 1373
BmrFI CCNGG 6 cut(s) 67, 417, 728, 824, 833, 1887
BmrI ACTGGG 2 cut(s) 1047, 1310
BmsI GCATC 4 cut(s) 601, 658, 1376, 1882
BmtI GCTAGC 1 cut(s) 1907
BmuI ACTGGG 2 cut(s) 1047, 1310
BoxI GACNNNNGTC 1 cut(s) 1169
BpiI GAAGAC 2 cut(s) 42, 1475
BplI GAGNNNNNCTC 2 cut(s) 1904, 1936
BpmI CTGGAG 3 cut(s) 163, 172, 555
Bpu1102I GCTNAGC 1 cut(s) 1037
Bpu14I TTCGAA 2 cut(s) 323, 434
BpuEI CTTGAG 2 cut(s) 152, 467
Bsa29I ATCGAT 1 cut(s) 57
BsaBI GATNNNNATC 1 cut(s) 102
BsaHI GRCGYC 1 cut(s) 1170
BsaI GGTCTC 1 cut(s) 549
BsaJI CCNNGG 4 cut(s) 415, 726, 1315, 1626
BsaWI WCCGGW 1 cut(s) 1739
Bsc4I CCNNNNNNNGG 2 cut(s) 141, 473
Bse118I RCCGGY 1 cut(s) 1739
Bse1I ACTGG 5 cut(s) 873, 1053, 1261, 1305, 1429
Bse21I CCTNAGG 1 cut(s) 1797
Bse3DI GCAATG 2 cut(s) 621, 1235
Bse8I GATNNNNATC 1 cut(s) 102
BseBI CCWGG 6 cut(s) 67, 417, 728, 824, 833, 1887
BseCI ATCGAT 1 cut(s) 57
BseDI CCNNGG 4 cut(s) 415, 726, 1315, 1626
BseGI GGATG 1 cut(s) 604
BseJI GATNNNNATC 1 cut(s) 102
BseLI CCNNNNNNNGG 2 cut(s) 141, 473
BseMI GCAATG 2 cut(s) 621, 1235
BseMII CTCAG 5 cut(s) 644, 1547, 1588, 1788, 1902
BseNI ACTGG 5 cut(s) 873, 1053, 1261, 1305, 1429
BseRI GAGGAG 3 cut(s) 35, 552, 643
BseSI GKGCMC 1 cut(s) 1942
BseX3I CGGCCG 1 cut(s) 201
BseXI GCAGC 6 cut(s) 514, 517, 606, 892, 1452, 1631
BseYI CCCAGC 1 cut(s) 137
Bsh1236I CGCG 1 cut(s) 206
Bsh1285I CGRYCG 1 cut(s) 204
BshFI GGCC 5 cut(s) 203, 259, 723, 1320, 1398
BshNI GGYRCC 3 cut(s) 513, 791, 964
BshTI ACCGGT 1 cut(s) 1739
BshVI ATCGAT 1 cut(s) 57
BsiEI CGRYCG 1 cut(s) 204
BsiHKAI GWGCWC 3 cut(s) 631, 717, 1942
BsiSI CCGG 2 cut(s) 275, 1740
BslFI GGGAC 1 cut(s) 266
BslI CCNNNNNNNGG 2 cut(s) 141, 473
BsmAI GTCTC 1 cut(s) 549
BsmFI GGGAC 1 cut(s) 266
BsmI GAATGC 1 cut(s) 284
BsnI GGCC 5 cut(s) 203, 259, 723, 1320, 1398
Bso31I GGTCTC 1 cut(s) 549
Bsp119I TTCGAA 2 cut(s) 323, 434
Bsp1286I GDGCHC 3 cut(s) 631, 717, 1942
Bsp143I GATC 9 cut(s) 103, 150, 220, 498, 1025, 1048, 1147, 1507, 1758
Bsp1720I GCTNAGC 1 cut(s) 1037
Bsp19I CCATGG 1 cut(s) 1626
BspACI CCGC 9 cut(s) 20, 72, 129, 192, 204, 894, 1015, 1363, 1821
BspANI GGCC 5 cut(s) 203, 259, 723, 1320, 1398
BspCNI CTCAG 5 cut(s) 643, 1546, 1587, 1789, 1903
BspDI ATCGAT 1 cut(s) 57
BspFNI CGCG 1 cut(s) 206
BspLI GGNNCC 6 cut(s) 105, 515, 724, 793, 966, 1373
BspMAI CTGCAG 1 cut(s) 179
BspMI ACCTGC 1 cut(s) 182
BspOI GCTAGC 1 cut(s) 1907
BspPI GGATC 6 cut(s) 98, 111, 158, 1033, 1043, 1753
BspT104I TTCGAA 2 cut(s) 323, 434
BspT107I GGYRCC 3 cut(s) 513, 791, 964
BspTNI GGTCTC 1 cut(s) 549
BsrBI CCGCTC 1 cut(s) 74
BsrDI GCAATG 2 cut(s) 621, 1235
BsrFI RCCGGY 1 cut(s) 1739
BsrI ACTGG 5 cut(s) 873, 1053, 1261, 1305, 1429
BssAI RCCGGY 1 cut(s) 1739
BssECI CCNNGG 4 cut(s) 415, 726, 1315, 1626
BssMI GATC 9 cut(s) 103, 150, 220, 498, 1025, 1048, 1147, 1507, 1758
BssNI GRCGYC 1 cut(s) 1170
BssSI CACGAG 1 cut(s) 1935
BssT1I CCWWGG 2 cut(s) 1315, 1626
Bst2BI CACGAG 1 cut(s) 1935
Bst2UI CCWGG 6 cut(s) 67, 417, 728, 824, 833, 1887
Bst4CI ACNGT 4 cut(s) 331, 561, 902, 1327
BstACI GRCGYC 1 cut(s) 1170
BstAPI GCANNNNNTGC 2 cut(s) 808, 902
BstBI TTCGAA 2 cut(s) 323, 434
BstC8I GCNNGC 4 cut(s) 864, 1457, 1461, 1905
BstDEI CTNAG 7 cut(s) 630, 1037, 1448, 1533, 1574, 1797, 1911
BstDSI CCRYGG 1 cut(s) 1626
BstEII GGTNACC 1 cut(s) 818
BstF5I GGATG 1 cut(s) 604
BstFNI CGCG 1 cut(s) 206
BstH2I RGCGCY 1 cut(s) 1466
BstHHI GCGC 2 cut(s) 124, 1465
BstKTI GATC 9 cut(s) 106, 153, 223, 501, 1028, 1051, 1150, 1510, 1761
BstMAI GTCTC 1 cut(s) 549
BstMBI GATC 9 cut(s) 103, 150, 220, 498, 1025, 1048, 1147, 1507, 1758
BstMCI CGRYCG 1 cut(s) 204
BstMWI GCNNNNNNNGC 9 cut(s) 71, 128, 316, 808, 893, 902, 1395, 1465, 1524
BstNI CCWGG 6 cut(s) 67, 417, 728, 824, 833, 1887
BstNSI RCATGY 2 cut(s) 1350, 1595
BstPAI GACNNNNGTC 1 cut(s) 1169
BstPI GGTNACC 1 cut(s) 818
BstSCI CCNGG 6 cut(s) 65, 415, 726, 822, 831, 1885
BstSFI CTRYAG 2 cut(s) 175, 1752
BstSLI GKGCMC 1 cut(s) 1942
BstUI CGCG 1 cut(s) 206
BstV1I GCAGC 6 cut(s) 514, 517, 606, 892, 1452, 1631
BstV2I GAAGAC 2 cut(s) 42, 1475
BstX2I RGATCY 4 cut(s) 103, 498, 1048, 1758
BstYI RGATCY 4 cut(s) 103, 498, 1048, 1758
BstZI CGGCCG 1 cut(s) 201
Bsu15I ATCGAT 1 cut(s) 57
Bsu36I CCTNAGG 1 cut(s) 1797
BsuI GTATCC 1 cut(s) 1827
BsuRI GGCC 5 cut(s) 203, 259, 723, 1320, 1398
BsuTUI ATCGAT 1 cut(s) 57
BtgI CCRYGG 1 cut(s) 1626
BtsCI GGATG 1 cut(s) 604
BtsI GCAGTG 2 cut(s) 184, 396
BveI ACCTGC 1 cut(s) 182
Cac8I GCNNGC 4 cut(s) 864, 1457, 1461, 1905
CfoI GCGC 2 cut(s) 124, 1465
Cfr10I RCCGGY 1 cut(s) 1739
Cfr13I GGNCC 4 cut(s) 69, 722, 1413, 1883
ClaI ATCGAT 1 cut(s) 57
CseI GACGC 1 cut(s) 1159
CsiI ACCWGGT 2 cut(s) 822, 1885
Csp6I GTAC 6 cut(s) 448, 1062, 1215, 1530, 1578, 1737
CspAI ACCGGT 1 cut(s) 1739
CviAII CATG 9 cut(s) 234, 239, 1347, 1391, 1544, 1592, 1627, 1731, 1923
CviQI GTAC 6 cut(s) 448, 1062, 1215, 1530, 1578, 1737
DdeI CTNAG 7 cut(s) 630, 1037, 1448, 1533, 1574, 1797, 1911
DpnI GATC 9 cut(s) 105, 152, 222, 500, 1027, 1050, 1149, 1509, 1760
DpnII GATC 9 cut(s) 103, 150, 220, 498, 1025, 1048, 1147, 1507, 1758
DraIII CACNNNGTG 1 cut(s) 513
DrdI GACNNNNNNGTC 1 cut(s) 827
DseDI GACNNNNNNGTC 1 cut(s) 827
EaeI YGGCCR 2 cut(s) 201, 1318
EagI CGGCCG 1 cut(s) 201
Ecl136II GAGCTC 2 cut(s) 629, 715
EclXI CGGCCG 1 cut(s) 201
Eco130I CCWWGG 2 cut(s) 1315, 1626
Eco147I AGGCCT 1 cut(s) 259
Eco24I GRGCYC 2 cut(s) 631, 717
Eco31I GGTCTC 1 cut(s) 549
Eco47I GGWCC 3 cut(s) 69, 1413, 1883
Eco47III AGCGCT 1 cut(s) 1464
Eco52I CGGCCG 1 cut(s) 201
Eco53kI GAGCTC 2 cut(s) 629, 715
Eco57I CTGAAG 1 cut(s) 942
Eco81I CCTNAGG 1 cut(s) 1797
Eco91I GGTNACC 1 cut(s) 818
EcoICRI GAGCTC 2 cut(s) 629, 715
EcoO65I GGTNACC 1 cut(s) 818
EcoRI GAATTC 1 cut(s) 1781
EcoRII CCWGG 6 cut(s) 65, 415, 726, 822, 831, 1885
EcoT14I CCWWGG 2 cut(s) 1315, 1626
EcoT22I ATGCAT 1 cut(s) 673
EcoT38I GRGCYC 2 cut(s) 631, 717
ErhI CCWWGG 2 cut(s) 1315, 1626
FaeI CATG 9 cut(s) 237, 242, 1350, 1394, 1547, 1595, 1630, 1734, 1926
FalI AAGNNNNNCTT 4 cut(s) 347, 379, 915, 947
FaqI GGGAC 1 cut(s) 266
FatI CATG 9 cut(s) 233, 238, 1346, 1390, 1543, 1591, 1626, 1730, 1922
FauI CCCGC 1 cut(s) 1828
FblI GTMKAC 1 cut(s) 1329
FokI GGATG 1 cut(s) 611
FriOI GRGCYC 2 cut(s) 631, 717
FspBI CTAG 5 cut(s) 578, 623, 1400, 1524, 1904
GlaI GCGC 2 cut(s) 123, 1464
GsaI CCCAGC 1 cut(s) 141
GsuI CTGGAG 3 cut(s) 163, 172, 555
HaeII RGCGCY 1 cut(s) 1466
HaeIII GGCC 5 cut(s) 203, 259, 723, 1320, 1398
HapII CCGG 2 cut(s) 275, 1740
HgaI GACGC 1 cut(s) 1159
HhaI GCGC 2 cut(s) 124, 1465
Hin1I GRCGYC 1 cut(s) 1170
Hin1II CATG 9 cut(s) 237, 242, 1350, 1394, 1547, 1595, 1630, 1734, 1926
Hin6I GCGC 2 cut(s) 122, 1463
HinP1I GCGC 2 cut(s) 122, 1463
HincII GTYRAC 2 cut(s) 400, 1861
HindII GTYRAC 2 cut(s) 400, 1861
HindIII AAGCTT 1 cut(s) 317
HinfI GANTC 9 cut(s) 14, 98, 163, 341, 478, 644, 1094, 1699, 1917
HpaI GTTAAC 1 cut(s) 1861
HpaII CCGG 2 cut(s) 275, 1740
HphI GGTGA 3 cut(s) 620, 830, 1901
Hpy166II GTNNAC 6 cut(s) 400, 1064, 1330, 1737, 1861, 1940
Hpy188I TCNGA 9 cut(s) 103, 162, 220, 643, 1059, 1344, 1417, 1507, 1536
Hpy188III TCNNGA 7 cut(s) 169, 484, 665, 1029, 1154, 1775, 1881
Hpy8I GTNNAC 6 cut(s) 400, 1064, 1330, 1737, 1861, 1940
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 3 cut(s) 306, 486, 1360
HpyCH4III ACNGT 4 cut(s) 331, 561, 902, 1327
HpyCH4IV ACGT 2 cut(s) 402, 684
HpyF10VI GCNNNNNNNGC 9 cut(s) 71, 128, 316, 808, 893, 902, 1395, 1465, 1524
HpyF3I CTNAG 7 cut(s) 630, 1037, 1448, 1533, 1574, 1797, 1911
HpySE526I ACGT 2 cut(s) 402, 684
Hsp92I GRCGYC 1 cut(s) 1170
Hsp92II CATG 9 cut(s) 237, 242, 1350, 1394, 1547, 1595, 1630, 1734, 1926
HspAI GCGC 2 cut(s) 122, 1463
KspAI GTTAAC 1 cut(s) 1861
Kzo9I GATC 9 cut(s) 103, 150, 220, 498, 1025, 1048, 1147, 1507, 1758
LmnI GCTCC 3 cut(s) 119, 626, 1430
Lsp1109I GCAGC 6 cut(s) 514, 517, 606, 892, 1452, 1631
LweI GCATC 4 cut(s) 601, 658, 1376, 1882
MabI ACCWGGT 2 cut(s) 822, 1885
MaeI CTAG 5 cut(s) 578, 623, 1400, 1524, 1904
MaeII ACGT 2 cut(s) 402, 684
MaeIII GTNAC 9 cut(s) 196, 331, 426, 818, 1154, 1189, 1296, 1587, 1612
MalI GATC 9 cut(s) 105, 152, 222, 500, 1027, 1050, 1149, 1509, 1760
MbiI CCGCTC 1 cut(s) 74
MboI GATC 9 cut(s) 103, 150, 220, 498, 1025, 1048, 1147, 1507, 1758
MfeI CAATTG 3 cut(s) 290, 953, 1854
MflI RGATCY 4 cut(s) 103, 498, 1048, 1758
MhlI GDGCHC 3 cut(s) 631, 717, 1942
MlsI TGGCCA 1 cut(s) 1320
MluNI TGGCCA 1 cut(s) 1320
MlyI GAGTC 2 cut(s) 8, 1693
MmeI TCCRAC 2 cut(s) 128, 363
Mox20I TGGCCA 1 cut(s) 1320
Mph1103I ATGCAT 1 cut(s) 673
MroXI GAANNNNTTC 4 cut(s) 359, 1370, 1560, 1674
MscI TGGCCA 1 cut(s) 1320
MseI TTAA 3 cut(s) 1310, 1860, 1954
MslI CAYNNNNRTG 3 cut(s) 232, 522, 1945
Msp20I TGGCCA 1 cut(s) 1320
MspA1I CMGCKG 2 cut(s) 141, 192
MspI CCGG 2 cut(s) 275, 1740
MspR9I CCNGG 6 cut(s) 67, 417, 728, 824, 833, 1887
MunI CAATTG 3 cut(s) 290, 953, 1854
Mva1269I GAATGC 1 cut(s) 284
MvaI CCWGG 6 cut(s) 67, 417, 728, 824, 833, 1887
MvnI CGCG 1 cut(s) 206
MwoI GCNNNNNNNGC 9 cut(s) 71, 128, 316, 808, 893, 902, 1395, 1465, 1524
NcoI CCATGG 1 cut(s) 1626
NdeII GATC 9 cut(s) 103, 150, 220, 498, 1025, 1048, 1147, 1507, 1758
NheI GCTAGC 1 cut(s) 1903
NlaIII CATG 9 cut(s) 237, 242, 1350, 1394, 1547, 1595, 1630, 1734, 1926
NlaIV GGNNCC 6 cut(s) 105, 515, 724, 793, 966, 1373
NmuCI GTSAC 5 cut(s) 331, 818, 1154, 1296, 1587
NsiI ATGCAT 1 cut(s) 673
NspI RCATGY 2 cut(s) 1350, 1595
NspV TTCGAA 2 cut(s) 323, 434
OliI CACNNNNGTG 1 cut(s) 1945
PceI AGGCCT 1 cut(s) 259
PcsI WCGNNNNNNNCGW 1 cut(s) 553
PctI GAATGC 1 cut(s) 284
PdmI GAANNNNTTC 4 cut(s) 359, 1370, 1560, 1674
PfeI GAWTC 7 cut(s) 98, 163, 341, 478, 644, 1094, 1917
PinAI ACCGGT 1 cut(s) 1739
PleI GAGTC 2 cut(s) 8, 1693
PpsI GAGTC 2 cut(s) 8, 1693
PshAI GACNNNNGTC 1 cut(s) 1169
Psp124BI GAGCTC 2 cut(s) 631, 717
Psp1406I AACGTT 2 cut(s) 402, 684
Psp6I CCWGG 6 cut(s) 65, 415, 726, 822, 831, 1885
PspEI GGTNACC 1 cut(s) 818
PspFI CCCAGC 1 cut(s) 137
PspGI CCWGG 6 cut(s) 65, 415, 726, 822, 831, 1885
PspN4I GGNNCC 6 cut(s) 105, 515, 724, 793, 966, 1373
PspPI GGNCC 4 cut(s) 69, 722, 1413, 1883
PstI CTGCAG 1 cut(s) 179
PsuI RGATCY 4 cut(s) 103, 498, 1048, 1758
PvuII CAGCTG 1 cut(s) 141
RsaI GTAC 6 cut(s) 449, 1063, 1216, 1531, 1579, 1738
RsaNI GTAC 6 cut(s) 448, 1062, 1215, 1530, 1578, 1737
RseI CAYNNNNRTG 3 cut(s) 232, 522, 1945
SacI GAGCTC 2 cut(s) 631, 717
SaqAI TTAA 3 cut(s) 1310, 1860, 1954
Sau3AI GATC 9 cut(s) 103, 150, 220, 498, 1025, 1048, 1147, 1507, 1758
Sau96I GGNCC 4 cut(s) 69, 722, 1413, 1883
SchI GAGTC 2 cut(s) 8, 1693
ScrFI CCNGG 6 cut(s) 67, 417, 728, 824, 833, 1887
SduI GDGCHC 3 cut(s) 631, 717, 1942
SexAI ACCWGGT 2 cut(s) 822, 1885
SfaNI GCATC 4 cut(s) 601, 658, 1376, 1882
SfcI CTRYAG 2 cut(s) 175, 1752
SfuI TTCGAA 2 cut(s) 323, 434
SinI GGWCC 3 cut(s) 69, 1413, 1883
SmiMI CAYNNNNRTG 3 cut(s) 232, 522, 1945
SmlI CTYRAG 2 cut(s) 167, 482
SmoI CTYRAG 2 cut(s) 167, 482
SseBI AGGCCT 1 cut(s) 259
SsiI CCGC 9 cut(s) 20, 72, 129, 192, 204, 894, 1015, 1363, 1821
SspI AATATT 1 cut(s) 1292
SspMI CTAG 5 cut(s) 578, 623, 1400, 1524, 1904
SstI GAGCTC 2 cut(s) 631, 717
StuI AGGCCT 1 cut(s) 259
StyD4I CCNGG 6 cut(s) 65, 415, 726, 822, 831, 1885
StyI CCWWGG 2 cut(s) 1315, 1626
TaaI ACNGT 4 cut(s) 331, 561, 902, 1327
TaiI ACGT 2 cut(s) 405, 687
TaqI TCGA 6 cut(s) 12, 57, 90, 323, 434, 556
TatI WGTACW 4 cut(s) 447, 1061, 1529, 1577
TauI GCSGC 4 cut(s) 22, 195, 206, 1017
TfiI GAWTC 7 cut(s) 98, 163, 341, 478, 644, 1094, 1917
Tru1I TTAA 3 cut(s) 1310, 1860, 1954
Tru9I TTAA 3 cut(s) 1310, 1860, 1954
TseFI GTSAC 5 cut(s) 331, 818, 1154, 1296, 1587
TseI GCWGC 6 cut(s) 527, 530, 619, 905, 1465, 1644
Tsp45I GTSAC 5 cut(s) 331, 818, 1154, 1296, 1587
TspGWI ACGGA 1 cut(s) 126
VneI GTGCAC 1 cut(s) 1938
VpaK11BI GGWCC 3 cut(s) 69, 1413, 1883
XapI RAATTY 4 cut(s) 50, 358, 935, 1781
XceI RCATGY 2 cut(s) 1350, 1595
XmiI GTMKAC 1 cut(s) 1329
XmnI GAANNNNTTC 4 cut(s) 359, 1370, 1560, 1674
XspI CTAG 5 cut(s) 578, 623, 1400, 1524, 1904
Zsp2I ATGCAT 1 cut(s) 673
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.