Rroxscaffold_5G00367120

Cell division control protein 24, OB domain 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0014037
Physical Location & Seq
Forward (+)
49015893 .. 49023882
7990 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00367120.1

Sequence Viewer

Length: 2256 bp
ATGGCTCGGATAAAGCCCCAGGCTCTGTTACTTCAGAGCAAGAAGAAAAAAGGACCGACTCGAATCAGTGTCACTACCATAGTTATGTGCAATCTAATCATCGCTTTGATTGCCTTGTCCTTGGTCGCCACTTATCGCTATTGGTCCAGAAGGTCACTGGATCATACCGGCTCTGACTATTCTGCTGCAGAGGAAATGGATGCGTTTTCGAAGAAGGATGATCTTCCCGGTTATGCTAGCGCTTCATTCCCTGTTCTTGCTGCTGACATATTAGGTTTAATCACAGTGGAACTTTACAAGGATGGTTCTCCAGAGGTTGTGGATAGATTTCTTGACTTGTGGGATGCCCTTCAGTCATGGATCACCAGTGAAATGGGGCGGAGACCGCCCCCCAGCTGGAGTTGGATCGCCTCTCGGATTCTCAAGACCTGCAGCGCCTACTCCAGCGGCGTTACGGCCGCGATTTTGCTCTCCGATCTCTCACAGGCGTGGCATGAGCAAAATAGGGACAGGCCTGTGAAGAAAATGCCGGAATGCGTGAAGCAATTGCGAAAGAAGAATAAGCGAAGGAAGCTTTCGAACACTGTGACCATTGATTCCATTTACGAGAAGAATTTCTTGTCCTTGAATAGTGTGTTGGAAGCAGTGATTGTCAACGTTTTTGTTCTCCCTGGCACCAACATTTATATGCTTTCCCTGGGGGACTTTTGGAGCACCAATACCATTGATCTTTATCTCCACCGCAGGTACTATGACTTGATAAATCCTACTAATGGGATTCTCAAGAAAGGAAGGCAGATCTTCCTCACGGGGTGCCATCTTCGTGCTGCTGCTGGAGGAGGGTCTCGTTGTCCTCGACTGTTGCCAACAGAATATCTAGTGATCTTGTTGGATGAGGATGATGATGGTGATGCAATGCTGCTAGGAGCTCAGTTTTGTTCAGATTCATTCTCTTCAATTTCTCTTGATGCATTTAGTAAAAACGTTTCTTATTCATTGTATGCAAGAATTGAGCTCATTGGCCCCCTGGAAGTTCGAGGAAAGTTTGGAACTTTACAAAGGAAACAAATCACTCTTGCAGATGATGATGGTGCCAAGTTGCAATTTCTGCTGTGGGGTGACCAGGTTGTCCTGGCAAATCTTTTCAGTGTGGGAAGTATGCTTGCACTGGATAAACCATATATTGCAAGTTCCGCAGACAGTGCTGCTGAAACAAGTGCTGAAGTTTCCCTTGAATTTGGTAGTGCAACACAATTGTTTTTGGTGCCTTTTGTTCAACACAAGGAGCAAGTATGTGTATCACTGACACCAAGCCGCCATCAAGGATCAAGACTGCTAAGCACATTAGATCCCAGTCAGAGTACACAAGTTTCTCAAGTTTCCTTGCCCTGTGATTCACAAGGGTCTATTGATTTTAGTAGTTATCCTTTTCAATCGTACATTACCGATCTTCGTGACAAGATGACAGGCGTCAGCCTTTATGGTGTTGTTACAAGTATCATCAAAGAAAGAGGTACCACAGAAGCTATCTTCTCCTTGCGAATTGAAGATACCACTGGAACAATTTGGACTAAATTACATTTTGTGAAATATTGGTCACTGGGAAGATTAAGCCTTGGCCACACCGTCTACATATCAGGTCTGACATGCTCTATGAAAAAGCGGAAGGGGTTCCAGCTAAACAGATGCCATGACGGCCTAGAAGCAATATGGTCCGAGAATACTGGTGGAGCTTCTTTCTTCAACCTTAGTAGCTTGCCAGCGCTGCTAAACTCATCTTGTCTTCATAAACTAACAAAGCTCTCTGATCTGTCCAGCCAGACTAGCTGTACTCAGATAGTTCATGTTCAGCTTGAAATGGTTCAATTTCATCTCAATACAAGGTTGTCACATGCCGTATGTGGTCATTTTGTTACCGAGCAACCCATGGGAGTTTCTAAATGCAGCTTCTGTAATGAGAATTGTGATGAAGTAATTCGCACTTTCCACCTGAAAATGACTCTTGCTGACAAGAGTGGGAAAATTTTTGCGTGGTGTACTGGTCATACTGCTACAGAGATCCTGCAAATATCTCCTGATGAATTCTTTGAACTACCTGAGGAAGAACAAGTTATGTATCCCGCTTCATTAGATAATGAGAGGTTCATGGTTGCAATTGTTAACTGCAAAAGGCAAGGTTCTGGACCTGGTGATGCTCTGGTGCTAGCAACTGAGGGAATCTCATGGGAGATTACTCGTGCACTGAAGTGCGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CDC24_OB1 CDC24_OB2 CDC24_OB3

Protein Analysis

751

Amino Acids

83.41

Weight (kDa)

6.76

Isoelectric Point (pI)

42.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CDC24_OB1 PF17246 130 - 227 1.7e-39 Cell division control protein 24, OB domain 1
CDC24_OB2 PF17245 233 - 362 1.4e-45 Cell division control protein 24, OB domain 2
CDC24_OB3 PF17244 483 - 710 4.7e-78 Cell division control protein 24, OB domain 3
Rep_fac-A_C PF08646 633 - 723 3.8e-06 Replication factor-A C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014037)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17030
fragaria_vesca FvH4_4g19640
malus_domestica MD13G1155000.v1.1
prunus_persica Prupe.1G118000_v2.0.a1
pyrus_communis pycom13g13180
rosa_chinensis RchiOBHm_Chr4g0424901 RchiOBHm_Chr4g0424931
rosa_laevigata RLG00000007411
rosa_multiflora Rmu_sc0006754.1_g000002 Rmu_ssc0000420.1_g000005
rosa_roxburghii Rroxscaffold_5G00367120
rosa_rugosa Rorug04G0200500
rosa_samantha Rh4AG257900 Rh4BG263300 Rh4CG274300 Rh4DG259000
rosa_wichuraiana Rw4G022260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1127
Acc36I ACCTGC 2 cut(s) 437, 735
Acc65I GGTACC 1 cut(s) 1514
AccB1I GGYRCC 5 cut(s) 674, 813, 1091, 1264, 1514
AccI GTMKAC 1 cut(s) 1629
AccII CGCG 1 cut(s) 461
AciI CCGC 9 cut(s) 379, 386, 447, 459, 742, 1194, 1315, 1663, 2121
AclI AACGTT 2 cut(s) 657, 984
AclWI GGATC 6 cut(s) 168, 368, 413, 1333, 1343, 2053
AcoI YGGCCR 2 cut(s) 456, 1618
AcsI RAATTY 4 cut(s) 613, 1235, 2022, 2081
AcuI CTGAAG 3 cut(s) 17, 335, 1242
AcyI GRCGYC 1 cut(s) 1470
AdeI CACNNNGTG 1 cut(s) 813
AfaI GTAC 6 cut(s) 749, 1363, 1439, 1516, 1831, 2038
AfeI AGCGCT 2 cut(s) 241, 1764
AfiI CCNNNNNNNGG 2 cut(s) 396, 773
AjnI CCWGG 7 cut(s) 18, 670, 696, 1026, 1122, 1131, 2185
AjuI GAANNNNNNNTTGG 2 cut(s) 620, 652
AleI CACNNNNGTG 2 cut(s) 487, 2245
Alw21I GWGCWC 4 cut(s) 716, 931, 1017, 2242
Alw26I GTCTC 2 cut(s) 376, 849
Alw44I GTGCAC 1 cut(s) 2238
AlwI GGATC 6 cut(s) 168, 368, 413, 1333, 1343, 2053
AlwNI CAGNNNCTG 2 cut(s) 25, 1950
Aor51HI AGCGCT 2 cut(s) 241, 1764
AoxI GGCC 5 cut(s) 456, 512, 1021, 1618, 1696
ApaLI GTGCAC 1 cut(s) 2238
ApeKI GCWGC 9 cut(s) 185, 260, 432, 827, 830, 919, 1205, 1765, 1944
ApoI RAATTY 4 cut(s) 613, 1235, 2022, 2081
Asp700I GAANNNNTTC 4 cut(s) 614, 1670, 1860, 1974
Asp718I GGTACC 1 cut(s) 1514
AspLEI GCGC 3 cut(s) 242, 437, 1765
AspS9I GGNCC 5 cut(s) 53, 144, 1022, 1713, 2183
AsuC2I CCSGG 1 cut(s) 228
AsuHPI GGTGA 4 cut(s) 355, 920, 1130, 2201
AsuII TTCGAA 2 cut(s) 209, 578
AsuNHI GCTAGC 2 cut(s) 236, 2203
AvaII GGWCC 4 cut(s) 53, 144, 1713, 2183
AxyI CCTNAGG 1 cut(s) 2097
BaeGI GKGCMC 1 cut(s) 2242
BalI TGGCCA 1 cut(s) 1620
BanI GGYRCC 5 cut(s) 674, 813, 1091, 1264, 1514
BanII GRGCYC 2 cut(s) 931, 1017
BauI CACGAG 1 cut(s) 2235
BbsI GAAGAC 1 cut(s) 1775
Bbv12I GWGCWC 4 cut(s) 716, 931, 1017, 2242
BbvI GCAGC 9 cut(s) 172, 247, 444, 814, 817, 906, 1192, 1752, 1956
BccI CCATC 5 cut(s) 296, 825, 899, 1082, 1326
BceAI ACGGC 3 cut(s) 471, 1711, 1880
BciT130I CCWGG 7 cut(s) 20, 672, 698, 1028, 1124, 1133, 2187
BciVI GTATCC 1 cut(s) 2127
BcnI CCSGG 1 cut(s) 228
BcoDI GTCTC 2 cut(s) 376, 849
BfaI CTAG 6 cut(s) 237, 878, 923, 1700, 1824, 2204
BfmI CTRYAG 3 cut(s) 186, 430, 2052
BfoI RGCGCY 3 cut(s) 243, 438, 1766
BfuAI ACCTGC 2 cut(s) 437, 735
BfuI GTATCC 1 cut(s) 2127
BglI GCCNNNNNGGC 1 cut(s) 1695
BglII AGATCT 1 cut(s) 798
BlpI GCTNAGC 1 cut(s) 1337
Bme1390I CCNGG 8 cut(s) 20, 228, 672, 698, 1028, 1124, 1133, 2187
Bme18I GGWCC 4 cut(s) 53, 144, 1713, 2183
BmgT120I GGNCC 5 cut(s) 53, 144, 1022, 1713, 2183
BmiI GGNNCC 7 cut(s) 676, 815, 1024, 1093, 1266, 1516, 1673
BmrFI CCNGG 8 cut(s) 20, 228, 672, 698, 1028, 1124, 1133, 2187
BmrI ACTGGG 2 cut(s) 1347, 1610
BmsI GCATC 6 cut(s) 190, 334, 901, 958, 1676, 2182
BmtI GCTAGC 2 cut(s) 240, 2207
BmuI ACTGGG 2 cut(s) 1347, 1610
BoxI GACNNNNGTC 1 cut(s) 1469
BpiI GAAGAC 1 cut(s) 1775
BplI GAGNNNNNCTC 2 cut(s) 2204, 2236
BpmI CTGGAG 4 cut(s) 294, 418, 427, 855
Bpu1102I GCTNAGC 1 cut(s) 1337
Bpu14I TTCGAA 2 cut(s) 209, 578
BpuEI CTTGAG 3 cut(s) 407, 767, 1359
BpuMI CCSGG 1 cut(s) 228
BsaBI GATNNNNATC 1 cut(s) 732
BsaHI GRCGYC 1 cut(s) 1470
BsaI GGTCTC 2 cut(s) 376, 849
BsaJI CCNNGG 8 cut(s) 18, 120, 670, 696, 697, 1026, 1615, 1926
Bsc4I CCNNNNNNNGG 2 cut(s) 396, 773
Bse118I RCCGGY 1 cut(s) 167
Bse1I ACTGG 8 cut(s) 162, 366, 1173, 1353, 1561, 1605, 1729, 2044
Bse21I CCTNAGG 1 cut(s) 2097
Bse3DI GCAATG 1 cut(s) 921
Bse8I GATNNNNATC 1 cut(s) 732
BseBI CCWGG 7 cut(s) 20, 672, 698, 1028, 1124, 1133, 2187
BseDI CCNNGG 8 cut(s) 18, 120, 670, 696, 697, 1026, 1615, 1926
BseGI GGATG 6 cut(s) 205, 223, 307, 349, 898, 904
BseJI GATNNNNATC 1 cut(s) 732
BseLI CCNNNNNNNGG 2 cut(s) 396, 773
BseMI GCAATG 1 cut(s) 921
BseMII CTCAG 4 cut(s) 944, 1847, 2088, 2202
BseNI ACTGG 8 cut(s) 162, 366, 1173, 1353, 1561, 1605, 1729, 2044
BseRI GAGGAG 1 cut(s) 852
BseSI GKGCMC 1 cut(s) 2242
BseX3I CGGCCG 1 cut(s) 456
BseXI GCAGC 9 cut(s) 172, 247, 444, 814, 817, 906, 1192, 1752, 1956
BseYI CCCAGC 1 cut(s) 392
Bsh1236I CGCG 1 cut(s) 461
Bsh1285I CGRYCG 1 cut(s) 459
BshFI GGCC 5 cut(s) 458, 514, 1023, 1620, 1698
BshNI GGYRCC 5 cut(s) 674, 813, 1091, 1264, 1514
BsiEI CGRYCG 1 cut(s) 459
BsiHKAI GWGCWC 4 cut(s) 716, 931, 1017, 2242
BsiSI CCGG 3 cut(s) 168, 228, 530
BslFI GGGAC 2 cut(s) 521, 716
BslI CCNNNNNNNGG 2 cut(s) 396, 773
BsmAI GTCTC 2 cut(s) 376, 849
BsmFI GGGAC 2 cut(s) 521, 716
BsmI GAATGC 1 cut(s) 539
BsnI GGCC 5 cut(s) 458, 514, 1023, 1620, 1698
Bso31I GGTCTC 2 cut(s) 376, 849
Bsp119I TTCGAA 2 cut(s) 209, 578
Bsp1286I GDGCHC 4 cut(s) 716, 931, 1017, 2242
Bsp1720I GCTNAGC 1 cut(s) 1337
Bsp19I CCATGG 1 cut(s) 1926
BspACI CCGC 9 cut(s) 379, 386, 447, 459, 742, 1194, 1315, 1663, 2121
BspANI GGCC 5 cut(s) 458, 514, 1023, 1620, 1698
BspCNI CTCAG 4 cut(s) 943, 1846, 2089, 2203
BspFNI CGCG 1 cut(s) 461
BspLI GGNNCC 7 cut(s) 676, 815, 1024, 1093, 1266, 1516, 1673
BspMAI CTGCAG 2 cut(s) 190, 434
BspMI ACCTGC 2 cut(s) 437, 735
BspOI GCTAGC 2 cut(s) 240, 2207
BspPI GGATC 6 cut(s) 168, 368, 413, 1333, 1343, 2053
BspT104I TTCGAA 2 cut(s) 209, 578
BspT107I GGYRCC 5 cut(s) 674, 813, 1091, 1264, 1514
BspTNI GGTCTC 2 cut(s) 376, 849
BsrDI GCAATG 1 cut(s) 921
BsrFI RCCGGY 1 cut(s) 167
BsrI ACTGG 8 cut(s) 162, 366, 1173, 1353, 1561, 1605, 1729, 2044
BssAI RCCGGY 1 cut(s) 167
BssECI CCNNGG 8 cut(s) 18, 120, 670, 696, 697, 1026, 1615, 1926
BssNI GRCGYC 1 cut(s) 1470
BssSI CACGAG 1 cut(s) 2235
BssT1I CCWWGG 3 cut(s) 120, 1615, 1926
Bst2BI CACGAG 1 cut(s) 2235
Bst2UI CCWGG 7 cut(s) 20, 672, 698, 1028, 1124, 1133, 2187
Bst4CI ACNGT 5 cut(s) 286, 586, 861, 1202, 1627
Bst6I CTCTTC 1 cut(s) 958
BstACI GRCGYC 1 cut(s) 1470
BstAPI GCANNNNNTGC 2 cut(s) 1108, 1202
BstBI TTCGAA 2 cut(s) 209, 578
BstC8I GCNNGC 5 cut(s) 238, 1164, 1757, 1761, 2205
BstDEI CTNAG 6 cut(s) 930, 1337, 1748, 1833, 2097, 2211
BstDSI CCRYGG 1 cut(s) 1926
BstEII GGTNACC 1 cut(s) 1118
BstF5I GGATG 6 cut(s) 205, 223, 307, 349, 898, 904
BstFNI CGCG 1 cut(s) 461
BstH2I RGCGCY 3 cut(s) 243, 438, 1766
BstHHI GCGC 3 cut(s) 242, 437, 1765
BstMAI GTCTC 2 cut(s) 376, 849
BstMCI CGRYCG 1 cut(s) 459
BstMWI GCNNNNNNNGC 9 cut(s) 110, 385, 571, 1108, 1193, 1202, 1695, 1765, 1824
BstNI CCWGG 7 cut(s) 20, 672, 698, 1028, 1124, 1133, 2187
BstNSI RCATGY 2 cut(s) 1650, 1895
BstPAI GACNNNNGTC 1 cut(s) 1469
BstPI GGTNACC 1 cut(s) 1118
BstSCI CCNGG 8 cut(s) 18, 226, 670, 696, 1026, 1122, 1131, 2185
BstSFI CTRYAG 3 cut(s) 186, 430, 2052
BstSLI GKGCMC 1 cut(s) 2242
BstUI CGCG 1 cut(s) 461
BstV1I GCAGC 9 cut(s) 172, 247, 444, 814, 817, 906, 1192, 1752, 1956
BstV2I GAAGAC 1 cut(s) 1775
BstX2I RGATCY 3 cut(s) 798, 1348, 2058
BstXI CCANNNNNNTGG 1 cut(s) 373
BstYI RGATCY 3 cut(s) 798, 1348, 2058
BstZI CGGCCG 1 cut(s) 456
Bsu36I CCTNAGG 1 cut(s) 2097
BsuI GTATCC 1 cut(s) 2127
BsuRI GGCC 5 cut(s) 458, 514, 1023, 1620, 1698
BtgI CCRYGG 1 cut(s) 1926
BtgZI GCGATG 1 cut(s) 85
BtsCI GGATG 6 cut(s) 205, 223, 307, 349, 898, 904
BtsI GCAGTG 1 cut(s) 651
BveI ACCTGC 2 cut(s) 437, 735
Cac8I GCNNGC 5 cut(s) 238, 1164, 1757, 1761, 2205
CaiI CAGNNNCTG 2 cut(s) 25, 1950
CfoI GCGC 3 cut(s) 242, 437, 1765
Cfr10I RCCGGY 1 cut(s) 167
Cfr13I GGNCC 5 cut(s) 53, 144, 1022, 1713, 2183
CseI GACGC 1 cut(s) 1459
CsiI ACCWGGT 2 cut(s) 1122, 2185
Csp6I GTAC 6 cut(s) 748, 1362, 1438, 1515, 1830, 2037
CviAII CATG 9 cut(s) 357, 494, 1647, 1691, 1844, 1892, 1927, 2146, 2223
CviQI GTAC 6 cut(s) 748, 1362, 1438, 1515, 1830, 2037
DdeI CTNAG 6 cut(s) 930, 1337, 1748, 1833, 2097, 2211
DraIII CACNNNGTG 1 cut(s) 813
DrdI GACNNNNNNGTC 1 cut(s) 1127
DseDI GACNNNNNNGTC 1 cut(s) 1127
EaeI YGGCCR 2 cut(s) 456, 1618
EagI CGGCCG 1 cut(s) 456
Eam1104I CTCTTC 1 cut(s) 958
EarI CTCTTC 1 cut(s) 958
EciI GGCGGA 1 cut(s) 394
Ecl136II GAGCTC 2 cut(s) 929, 1015
EclXI CGGCCG 1 cut(s) 456
Eco130I CCWWGG 3 cut(s) 120, 1615, 1926
Eco147I AGGCCT 1 cut(s) 514
Eco24I GRGCYC 2 cut(s) 931, 1017
Eco31I GGTCTC 2 cut(s) 376, 849
Eco47I GGWCC 4 cut(s) 53, 144, 1713, 2183
Eco47III AGCGCT 2 cut(s) 241, 1764
Eco52I CGGCCG 1 cut(s) 456
Eco53kI GAGCTC 2 cut(s) 929, 1015
Eco57I CTGAAG 3 cut(s) 17, 335, 1242
Eco81I CCTNAGG 1 cut(s) 2097
Eco91I GGTNACC 1 cut(s) 1118
EcoICRI GAGCTC 2 cut(s) 929, 1015
EcoO65I GGTNACC 1 cut(s) 1118
EcoRI GAATTC 1 cut(s) 2081
EcoRII CCWGG 7 cut(s) 18, 670, 696, 1026, 1122, 1131, 2185
EcoT14I CCWWGG 3 cut(s) 120, 1615, 1926
EcoT22I ATGCAT 1 cut(s) 973
EcoT38I GRGCYC 2 cut(s) 931, 1017
ErhI CCWWGG 3 cut(s) 120, 1615, 1926
FaeI CATG 9 cut(s) 360, 497, 1650, 1694, 1847, 1895, 1930, 2149, 2226
FalI AAGNNNNNCTT 4 cut(s) 602, 634, 1215, 1247
FaqI GGGAC 2 cut(s) 521, 716
FatI CATG 9 cut(s) 356, 493, 1646, 1690, 1843, 1891, 1926, 2145, 2222
FauI CCCGC 1 cut(s) 2128
FblI GTMKAC 1 cut(s) 1629
FokI GGATG 6 cut(s) 212, 230, 314, 356, 905, 911
FriOI GRGCYC 2 cut(s) 931, 1017
FspBI CTAG 6 cut(s) 237, 878, 923, 1700, 1824, 2204
GlaI GCGC 3 cut(s) 241, 436, 1764
GsaI CCCAGC 1 cut(s) 396
GsuI CTGGAG 4 cut(s) 294, 418, 427, 855
HaeII RGCGCY 3 cut(s) 243, 438, 1766
HaeIII GGCC 5 cut(s) 458, 514, 1023, 1620, 1698
HapII CCGG 3 cut(s) 168, 228, 530
HgaI GACGC 1 cut(s) 1459
HhaI GCGC 3 cut(s) 242, 437, 1765
Hin1I GRCGYC 1 cut(s) 1470
Hin1II CATG 9 cut(s) 360, 497, 1650, 1694, 1847, 1895, 1930, 2149, 2226
Hin6I GCGC 3 cut(s) 240, 435, 1763
HinP1I GCGC 3 cut(s) 240, 435, 1763
HincII GTYRAC 2 cut(s) 655, 2161
HindII GTYRAC 2 cut(s) 655, 2161
HindIII AAGCTT 1 cut(s) 572
HinfI GANTC 9 cut(s) 58, 63, 418, 596, 778, 944, 1394, 1999, 2217
HpaI GTTAAC 1 cut(s) 2161
HpaII CCGG 3 cut(s) 168, 228, 530
HphI GGTGA 4 cut(s) 355, 920, 1130, 2201
Hpy166II GTNNAC 6 cut(s) 655, 1364, 1630, 2037, 2161, 2240
Hpy8I GTNNAC 6 cut(s) 655, 1364, 1630, 2037, 2161, 2240
HpyAV CCTTC 6 cut(s) 144, 208, 359, 561, 786, 1660
HpyCH4III ACNGT 5 cut(s) 286, 586, 861, 1202, 1627
HpyCH4IV ACGT 2 cut(s) 657, 984
HpyF10VI GCNNNNNNNGC 9 cut(s) 110, 385, 571, 1108, 1193, 1202, 1695, 1765, 1824
HpyF3I CTNAG 6 cut(s) 930, 1337, 1748, 1833, 2097, 2211
HpySE526I ACGT 2 cut(s) 657, 984
Hsp92I GRCGYC 1 cut(s) 1470
Hsp92II CATG 9 cut(s) 360, 497, 1650, 1694, 1847, 1895, 1930, 2149, 2226
HspAI GCGC 3 cut(s) 240, 435, 1763
KpnI GGTACC 1 cut(s) 1518
KspAI GTTAAC 1 cut(s) 2161
LmnI GCTCC 4 cut(s) 711, 926, 1285, 1730
Lsp1109I GCAGC 9 cut(s) 172, 247, 444, 814, 817, 906, 1192, 1752, 1956
LweI GCATC 6 cut(s) 190, 334, 901, 958, 1676, 2182
MabI ACCWGGT 2 cut(s) 1122, 2185
MaeI CTAG 6 cut(s) 237, 878, 923, 1700, 1824, 2204
MaeII ACGT 2 cut(s) 657, 984
MfeI CAATTG 3 cut(s) 545, 1253, 2154
MflI RGATCY 3 cut(s) 798, 1348, 2058
MhlI GDGCHC 4 cut(s) 716, 931, 1017, 2242
MlsI TGGCCA 1 cut(s) 1620
MluNI TGGCCA 1 cut(s) 1620
MlyI GAGTC 2 cut(s) 52, 1993
MmeI TCCRAC 3 cut(s) 383, 618, 870
Mox20I TGGCCA 1 cut(s) 1620
Mph1103I ATGCAT 1 cut(s) 973
MroXI GAANNNNTTC 4 cut(s) 614, 1670, 1860, 1974
MscI TGGCCA 1 cut(s) 1620
MseI TTAA 4 cut(s) 278, 1610, 2160, 2254
MslI CAYNNNNRTG 5 cut(s) 83, 487, 686, 822, 2245
Msp20I TGGCCA 1 cut(s) 1620
MspA1I CMGCKG 2 cut(s) 396, 447
MspI CCGG 3 cut(s) 168, 228, 530
MspR9I CCNGG 8 cut(s) 20, 228, 672, 698, 1028, 1124, 1133, 2187
MunI CAATTG 3 cut(s) 545, 1253, 2154
Mva1269I GAATGC 1 cut(s) 539
MvaI CCWGG 7 cut(s) 20, 672, 698, 1028, 1124, 1133, 2187
MvnI CGCG 1 cut(s) 461
MwoI GCNNNNNNNGC 9 cut(s) 110, 385, 571, 1108, 1193, 1202, 1695, 1765, 1824
NciI CCSGG 1 cut(s) 228
NcoI CCATGG 1 cut(s) 1926
NheI GCTAGC 2 cut(s) 236, 2203
NlaIII CATG 9 cut(s) 360, 497, 1650, 1694, 1847, 1895, 1930, 2149, 2226
NlaIV GGNNCC 7 cut(s) 676, 815, 1024, 1093, 1266, 1516, 1673
NmuCI GTSAC 7 cut(s) 70, 153, 586, 1118, 1454, 1596, 1887
NsiI ATGCAT 1 cut(s) 973
NspI RCATGY 2 cut(s) 1650, 1895
NspV TTCGAA 2 cut(s) 209, 578
OliI CACNNNNGTG 2 cut(s) 487, 2245
PasI CCCWGGG 1 cut(s) 697
PceI AGGCCT 1 cut(s) 514
PcsI WCGNNNNNNNCGW 1 cut(s) 853
PctI GAATGC 1 cut(s) 539
PdmI GAANNNNTTC 4 cut(s) 614, 1670, 1860, 1974
PfeI GAWTC 7 cut(s) 63, 418, 596, 778, 944, 1394, 2217
PleI GAGTC 2 cut(s) 52, 1993
PpsI GAGTC 2 cut(s) 52, 1993
PshAI GACNNNNGTC 1 cut(s) 1469
Psp124BI GAGCTC 2 cut(s) 931, 1017
Psp1406I AACGTT 2 cut(s) 657, 984
Psp6I CCWGG 7 cut(s) 18, 670, 696, 1026, 1122, 1131, 2185
PspEI GGTNACC 1 cut(s) 1118
PspFI CCCAGC 1 cut(s) 392
PspGI CCWGG 7 cut(s) 18, 670, 696, 1026, 1122, 1131, 2185
PspN4I GGNNCC 7 cut(s) 676, 815, 1024, 1093, 1266, 1516, 1673
PspPI GGNCC 5 cut(s) 53, 144, 1022, 1713, 2183
PstI CTGCAG 2 cut(s) 190, 434
PstNI CAGNNNCTG 2 cut(s) 25, 1950
PsuI RGATCY 3 cut(s) 798, 1348, 2058
PvuII CAGCTG 1 cut(s) 396
RsaI GTAC 6 cut(s) 749, 1363, 1439, 1516, 1831, 2038
RsaNI GTAC 6 cut(s) 748, 1362, 1438, 1515, 1830, 2037
RseI CAYNNNNRTG 5 cut(s) 83, 487, 686, 822, 2245
SacI GAGCTC 2 cut(s) 931, 1017
SaqAI TTAA 4 cut(s) 278, 1610, 2160, 2254
Sau96I GGNCC 5 cut(s) 53, 144, 1022, 1713, 2183
SchI GAGTC 2 cut(s) 52, 1993
ScrFI CCNGG 8 cut(s) 20, 228, 672, 698, 1028, 1124, 1133, 2187
SduI GDGCHC 4 cut(s) 716, 931, 1017, 2242
SexAI ACCWGGT 2 cut(s) 1122, 2185
SfaNI GCATC 6 cut(s) 190, 334, 901, 958, 1676, 2182
SfcI CTRYAG 3 cut(s) 186, 430, 2052
SfuI TTCGAA 2 cut(s) 209, 578
SinI GGWCC 4 cut(s) 53, 144, 1713, 2183
SmiMI CAYNNNNRTG 5 cut(s) 83, 487, 686, 822, 2245
SmlI CTYRAG 3 cut(s) 422, 782, 1374
SmoI CTYRAG 3 cut(s) 422, 782, 1374
SseBI AGGCCT 1 cut(s) 514
SsiI CCGC 9 cut(s) 379, 386, 447, 459, 742, 1194, 1315, 1663, 2121
SspI AATATT 1 cut(s) 1592
SspMI CTAG 6 cut(s) 237, 878, 923, 1700, 1824, 2204
SstI GAGCTC 2 cut(s) 931, 1017
StuI AGGCCT 1 cut(s) 514
StyD4I CCNGG 8 cut(s) 18, 226, 670, 696, 1026, 1122, 1131, 2185
StyI CCWWGG 3 cut(s) 120, 1615, 1926
TaaI ACNGT 5 cut(s) 286, 586, 861, 1202, 1627
TaiI ACGT 2 cut(s) 660, 987
TaqI TCGA 5 cut(s) 61, 209, 578, 856, 1036
TaqII GACCGA 1 cut(s) 70
TatI WGTACW 3 cut(s) 1361, 1829, 2036
TauI GCSGC 3 cut(s) 450, 461, 1317
TfiI GAWTC 7 cut(s) 63, 418, 596, 778, 944, 1394, 2217
Tru1I TTAA 4 cut(s) 278, 1610, 2160, 2254
Tru9I TTAA 4 cut(s) 278, 1610, 2160, 2254
TseFI GTSAC 7 cut(s) 70, 153, 586, 1118, 1454, 1596, 1887
TseI GCWGC 9 cut(s) 185, 260, 432, 827, 830, 919, 1205, 1765, 1944
Tsp45I GTSAC 7 cut(s) 70, 153, 586, 1118, 1454, 1596, 1887
VneI GTGCAC 1 cut(s) 2238
VpaK11BI GGWCC 4 cut(s) 53, 144, 1713, 2183
XapI RAATTY 4 cut(s) 613, 1235, 2022, 2081
XceI RCATGY 2 cut(s) 1650, 1895
XcmI CCANNNNNNNNNTGG 1 cut(s) 154
XmiI GTMKAC 1 cut(s) 1629
XmnI GAANNNNTTC 4 cut(s) 614, 1670, 1860, 1974
XspI CTAG 6 cut(s) 237, 878, 923, 1700, 1824, 2204
Zsp2I ATGCAT 1 cut(s) 973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.