Rw4G022260

Cell division control protein 24, OB domain 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0014037
Physical Location & Seq
Forward (+)
47466213 .. 47470116
3904 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G022260.1

Sequence Viewer

Length: 1998 bp
ATGAACTCACTCGACTCGCTGGACCGCAATCCGCAACCACAAGAAGAAGACCCACTCCTCAAATTCATCGATTATGCCAGGTCCGCTCTCTCCCCTGAAATCGACGACGATTCGGATCCCAACGGAAATGGGACGGAGACCGCCCCGCCCAGCTGGAATTGGATCGCCTCTCGGATTCTCAAGACCTGCAGCGCCTACTCCAGCGGCGTTACGGCCGCGATTTTGCTCTCCGATCTCTCACAGGCATGGCATGAGCAAAATAGGGACAGGCCTGTGAAGAAAATGACGGAATGCGTGAAGCAATTGCGAAAGAAGAATAAGCGAAGGAAGCTTTCGAACACTGTGACTATTGATTCCATTTACGAGAAGAATTTCTTGTCCTTGAATAGTGTGTTGGAAGCAGTGATTGTCAACGTTTTTGTTCTCCCTGGCACCAACATTTATATGCTTTCCCTGGGGGACTTTTGGAGCACCAATACCATTGATCTTTATCTCCACCGCAGGTACTATGACTTGATAAATCCTACTAATGGGATTCTCAAGAAAGGAAGGCAGATCTTCCTCACGGGGTGCCATCTTCGTGCTGCTGCTGGAGGAGGGTCTCATTGTCCTCGACTGTTGCCAACAGAATATCTAGTGATATTGTTGGATGAGGATGATGATGGTGATGCAATGCTGCTAGGAGCTCAGTTTTTTTCAGATTCATTCTCCTCAATTTCTCTTGATGCATTTAGTAAAAACGTTTCTTATTCATTGTATGCAAGAATTGAGCTCATTGGCCCCCTGGAAGTTCGAGGAAAGTTTGGAACTTTACAAAGGAAACAAATCACTCTTGTAGATGATGATGGTGCCAAGTTGCAATTTCTGCTGTGGGGTGACCAGGTTGTCCTGGCAAATCTTTTCAGTGTGGGAAGTATGCTTGCACTGGATAAACCATATATTGCAAGTTCCGCAGACAGTGCTGCTGAAACAAGTGCTGAAGTTTCCCTTGAATTTGGTAGTGCAACACAATTGTTTTTGGTGCCTTTTGTTCAACACAAGGAACAAGTATGTGTATCACTGACACCAAGCCGCCATCAAGGATCAAGACTGCTAAGCACATTAGATCCCAGTCAGAGTACACAAGTTTCTCAAGTTTCCTTGCCCTGTGATTCACAAGGGTCTATTGATTTTAGTAGTTATCCTTTTCAATCCTACATTACCGATCTTCGTGACAAGATGACAGGCATCAGCCTTTATGGTGTTGTTACAAGTATCATCAAAGAAAGATGTACCACAGAAGCTATCTTCTCATTGCGAATTGAAGATACCACTGGAACAATTTGGACTAAATTACATTTTGTGAAATATTGGTCACTAGGAAGATTAAGCCTTGGCCACACCGTCTACATATCCGGTCTGACATGCTCTATGAAAAAGCGGAAGGGATGCCATAACGGCCTAGAAGCAATATGGTCCGAGAATACTGGTGGAGCTTCTTTCTTCAACCTTAGTAGCTTGCCAGCGCTGCTAAACTCATCTTGTCTTCATAAACTAACAAAGCTCTCTGATCTGTCCAGCCAGTCTAGCTGTACTCAGATAGTTCATGTTCAGCTTGAAATGGTTCAATTTCATCTCAGTACAAGGTTGTCACATGCTGTATGTGGTCATTTTGTTACCGAGCAACCCATGGGAGTTTCTAAATGCAGCTTCTGTAATGAGAATTGTGATGAAGTAATTCGCACTTTCCACCTGAAAATGACTCTTGCTGACAAGAGTGGGAAAGTTTTTGCATGGTGTACTGGTCATACTGCTACAGAGATCCTGCAAATATCTCCTGATGAATTCTTTGAACTACCTGAGGAAGAACAAGTTATGTATCCCGCTTCATTAGATAATGAGAGGTTCATGGTTGCAATTGTTAACTGCAAAAGGCAAGGTTCTGGACCTGGTGATGCTCTGGTGCTAGCAACTGAGGGAATCTCATGGGAGATTACTCGTGCAGTGAAGTGTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CDC24_OB1 CDC24_OB2 CDC24_OB3

Protein Analysis

665

Amino Acids

73.74

Weight (kDa)

5.71

Isoelectric Point (pI)

44.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CDC24_OB1 PF17246 20 - 146 1.9e-45 Cell division control protein 24, OB domain 1
CDC24_OB2 PF17245 152 - 281 2.6e-45 Cell division control protein 24, OB domain 2
CDC24_OB3 PF17244 402 - 624 1.6e-78 Cell division control protein 24, OB domain 3
Rep_fac-A_C PF08646 547 - 637 3.3e-06 Replication factor-A C terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014037)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17030
fragaria_vesca FvH4_4g19640
malus_domestica MD13G1155000.v1.1
prunus_persica Prupe.1G118000_v2.0.a1
pyrus_communis pycom13g13180
rosa_chinensis RchiOBHm_Chr4g0424901 RchiOBHm_Chr4g0424931
rosa_laevigata RLG00000007411
rosa_multiflora Rmu_sc0006754.1_g000002 Rmu_ssc0000420.1_g000005
rosa_roxburghii Rroxscaffold_5G00367120
rosa_rugosa Rorug04G0200500
rosa_samantha Rh4AG257900 Rh4BG263300 Rh4CG274300 Rh4DG259000
rosa_wichuraiana Rw4G022260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 884
Acc36I ACCTGC 2 cut(s) 194, 492
AccB1I GGYRCC 4 cut(s) 431, 570, 848, 1021
AccBSI CCGCTC 1 cut(s) 86
AccI GTMKAC 1 cut(s) 1386
AccII CGCG 1 cut(s) 218
AclI AACGTT 2 cut(s) 414, 741
AclWI GGATC 6 cut(s) 110, 123, 170, 1090, 1100, 1795
AcoI YGGCCR 2 cut(s) 213, 1375
AcsI RAATTY 4 cut(s) 62, 370, 992, 1823
AcuI CTGAAG 1 cut(s) 999
AdeI CACNNNGTG 1 cut(s) 570
AfaI GTAC 6 cut(s) 506, 1120, 1273, 1573, 1621, 1780
AfeI AGCGCT 1 cut(s) 1506
AfiI CCNNNNNNNGG 1 cut(s) 530
AgsI TTSAA 9 cut(s) 385, 992, 1034, 1190, 1304, 1486, 1598, 1607, 1832
AjnI CCWGG 7 cut(s) 77, 427, 453, 783, 879, 888, 1927
AjuI GAANNNNNNNTTGG 2 cut(s) 377, 409
Alw21I GWGCWC 3 cut(s) 473, 688, 774
Alw26I GTCTC 2 cut(s) 131, 606
AlwI GGATC 6 cut(s) 110, 123, 170, 1090, 1100, 1795
AlwNI CAGNNNCTG 1 cut(s) 1692
Aor51HI AGCGCT 1 cut(s) 1506
AoxI GGCC 5 cut(s) 213, 269, 778, 1375, 1438
ApeKI GCWGC 7 cut(s) 189, 584, 587, 676, 962, 1507, 1686
ApoI RAATTY 4 cut(s) 62, 370, 992, 1823
Asp700I GAANNNNTTC 3 cut(s) 371, 1602, 1716
AspLEI GCGC 2 cut(s) 194, 1507
AspS9I GGNCC 5 cut(s) 22, 81, 779, 1455, 1925
AsuHPI GGTGA 3 cut(s) 677, 887, 1943
AsuII TTCGAA 1 cut(s) 335
AsuNHI GCTAGC 1 cut(s) 1945
AvaII GGWCC 4 cut(s) 22, 81, 1455, 1925
AxyI CCTNAGG 1 cut(s) 1839
BalI TGGCCA 1 cut(s) 1377
BamHI GGATCC 1 cut(s) 115
BanI GGYRCC 4 cut(s) 431, 570, 848, 1021
BanII GRGCYC 2 cut(s) 688, 774
BauI CACGAG 1 cut(s) 1977
BbsI GAAGAC 2 cut(s) 54, 1517
Bbv12I GWGCWC 3 cut(s) 473, 688, 774
BbvI GCAGC 7 cut(s) 201, 571, 574, 663, 949, 1494, 1698
BccI CCATC 4 cut(s) 582, 656, 839, 1083
BceAI ACGGC 2 cut(s) 228, 1453
BciT130I CCWGG 7 cut(s) 79, 429, 455, 785, 881, 890, 1929
BciVI GTATCC 1 cut(s) 1869
BcoDI GTCTC 2 cut(s) 131, 606
BfaI CTAG 6 cut(s) 635, 680, 1358, 1442, 1566, 1946
BfmI CTRYAG 2 cut(s) 187, 1794
BfoI RGCGCY 2 cut(s) 195, 1508
BfuAI ACCTGC 2 cut(s) 194, 492
BfuI GTATCC 1 cut(s) 1869
BglI GCCNNNNNGGC 1 cut(s) 1437
BglII AGATCT 1 cut(s) 555
BlpI GCTNAGC 1 cut(s) 1094
Bme1390I CCNGG 7 cut(s) 79, 429, 455, 785, 881, 890, 1929
Bme18I GGWCC 4 cut(s) 22, 81, 1455, 1925
BmgT120I GGNCC 5 cut(s) 22, 81, 779, 1455, 1925
BmiI GGNNCC 6 cut(s) 117, 433, 572, 781, 850, 1023
BmrFI CCNGG 7 cut(s) 79, 429, 455, 785, 881, 890, 1929
BmrI ACTGGG 1 cut(s) 1104
BmsI GCATC 5 cut(s) 658, 715, 1236, 1418, 1924
BmtI GCTAGC 1 cut(s) 1949
BmuI ACTGGG 1 cut(s) 1104
BpiI GAAGAC 2 cut(s) 54, 1517
BplI GAGNNNNNCTC 2 cut(s) 1946, 1978
BpmI CTGGAG 2 cut(s) 184, 612
Bpu1102I GCTNAGC 1 cut(s) 1094
Bpu14I TTCGAA 1 cut(s) 335
BpuEI CTTGAG 3 cut(s) 164, 524, 1116
Bsa29I ATCGAT 1 cut(s) 69
BsaBI GATNNNNATC 2 cut(s) 114, 489
BsaI GGTCTC 2 cut(s) 131, 606
BsaJI CCNNGG 6 cut(s) 427, 453, 454, 783, 1372, 1668
BsaWI WCCGGW 1 cut(s) 1394
Bsc4I CCNNNNNNNGG 1 cut(s) 530
Bse1I ACTGG 6 cut(s) 930, 1110, 1318, 1471, 1561, 1786
Bse21I CCTNAGG 1 cut(s) 1839
Bse3DI GCAATG 2 cut(s) 678, 1292
Bse8I GATNNNNATC 2 cut(s) 114, 489
BseBI CCWGG 7 cut(s) 79, 429, 455, 785, 881, 890, 1929
BseCI ATCGAT 1 cut(s) 69
BseDI CCNNGG 6 cut(s) 427, 453, 454, 783, 1372, 1668
BseGI GGATG 3 cut(s) 655, 661, 1433
BseJI GATNNNNATC 2 cut(s) 114, 489
BseLI CCNNNNNNNGG 1 cut(s) 530
BseMI GCAATG 2 cut(s) 678, 1292
BseMII CTCAG 5 cut(s) 701, 1589, 1630, 1830, 1944
BseNI ACTGG 6 cut(s) 930, 1110, 1318, 1471, 1561, 1786
BseRI GAGGAG 3 cut(s) 47, 609, 700
BseX3I CGGCCG 1 cut(s) 213
BseXI GCAGC 7 cut(s) 201, 571, 574, 663, 949, 1494, 1698
BseYI CCCAGC 1 cut(s) 149
Bsh1236I CGCG 1 cut(s) 218
Bsh1285I CGRYCG 1 cut(s) 216
BshFI GGCC 5 cut(s) 215, 271, 780, 1377, 1440
BshNI GGYRCC 4 cut(s) 431, 570, 848, 1021
BshVI ATCGAT 1 cut(s) 69
BsiEI CGRYCG 1 cut(s) 216
BsiHKAI GWGCWC 3 cut(s) 473, 688, 774
BsiSI CCGG 1 cut(s) 1395
BslFI GGGAC 3 cut(s) 145, 278, 473
BslI CCNNNNNNNGG 1 cut(s) 530
BsmAI GTCTC 2 cut(s) 131, 606
BsmFI GGGAC 3 cut(s) 145, 278, 473
BsmI GAATGC 1 cut(s) 296
BsnI GGCC 5 cut(s) 215, 271, 780, 1377, 1440
Bso31I GGTCTC 2 cut(s) 131, 606
Bsp119I TTCGAA 1 cut(s) 335
Bsp1286I GDGCHC 3 cut(s) 473, 688, 774
Bsp1720I GCTNAGC 1 cut(s) 1094
Bsp19I CCATGG 1 cut(s) 1668
BspANI GGCC 5 cut(s) 215, 271, 780, 1377, 1440
BspCNI CTCAG 5 cut(s) 700, 1588, 1629, 1831, 1945
BspDI ATCGAT 1 cut(s) 69
BspFNI CGCG 1 cut(s) 218
BspLI GGNNCC 6 cut(s) 117, 433, 572, 781, 850, 1023
BspMAI CTGCAG 1 cut(s) 191
BspMI ACCTGC 2 cut(s) 194, 492
BspOI GCTAGC 1 cut(s) 1949
BspPI GGATC 6 cut(s) 110, 123, 170, 1090, 1100, 1795
BspT104I TTCGAA 1 cut(s) 335
BspT107I GGYRCC 4 cut(s) 431, 570, 848, 1021
BspTNI GGTCTC 2 cut(s) 131, 606
BsrBI CCGCTC 1 cut(s) 86
BsrDI GCAATG 2 cut(s) 678, 1292
BsrI ACTGG 6 cut(s) 930, 1110, 1318, 1471, 1561, 1786
BssECI CCNNGG 6 cut(s) 427, 453, 454, 783, 1372, 1668
BssSI CACGAG 1 cut(s) 1977
BssT1I CCWWGG 2 cut(s) 1372, 1668
Bst2BI CACGAG 1 cut(s) 1977
Bst2UI CCWGG 7 cut(s) 79, 429, 455, 785, 881, 890, 1929
Bst4CI ACNGT 4 cut(s) 343, 618, 959, 1384
BstAPI GCANNNNNTGC 2 cut(s) 865, 959
BstBI TTCGAA 1 cut(s) 335
BstC8I GCNNGC 4 cut(s) 921, 1499, 1503, 1947
BstDEI CTNAG 7 cut(s) 687, 1094, 1490, 1575, 1616, 1839, 1953
BstDSI CCRYGG 1 cut(s) 1668
BstEII GGTNACC 1 cut(s) 875
BstF5I GGATG 3 cut(s) 655, 661, 1433
BstFNI CGCG 1 cut(s) 218
BstH2I RGCGCY 2 cut(s) 195, 1508
BstHHI GCGC 2 cut(s) 194, 1507
BstMAI GTCTC 2 cut(s) 131, 606
BstMCI CGRYCG 1 cut(s) 216
BstMWI GCNNNNNNNGC 8 cut(s) 83, 328, 865, 950, 959, 1437, 1507, 1566
BstNI CCWGG 7 cut(s) 79, 429, 455, 785, 881, 890, 1929
BstNSI RCATGY 2 cut(s) 1407, 1637
BstPI GGTNACC 1 cut(s) 875
BstSCI CCNGG 7 cut(s) 77, 427, 453, 783, 879, 888, 1927
BstSFI CTRYAG 2 cut(s) 187, 1794
BstUI CGCG 1 cut(s) 218
BstV1I GCAGC 7 cut(s) 201, 571, 574, 663, 949, 1494, 1698
BstV2I GAAGAC 2 cut(s) 54, 1517
BstX2I RGATCY 4 cut(s) 115, 555, 1105, 1800
BstYI RGATCY 4 cut(s) 115, 555, 1105, 1800
BstZI CGGCCG 1 cut(s) 213
Bsu15I ATCGAT 1 cut(s) 69
Bsu36I CCTNAGG 1 cut(s) 1839
BsuI GTATCC 1 cut(s) 1869
BsuRI GGCC 5 cut(s) 215, 271, 780, 1377, 1440
BsuTUI ATCGAT 1 cut(s) 69
BtgI CCRYGG 1 cut(s) 1668
BtsCI GGATG 3 cut(s) 655, 661, 1433
BtsI GCAGTG 2 cut(s) 408, 1989
BtsIMutI CAGTG 8 cut(s) 339, 408, 910, 923, 964, 1058, 1311, 1989
BveI ACCTGC 2 cut(s) 194, 492
Cac8I GCNNGC 4 cut(s) 921, 1499, 1503, 1947
CaiI CAGNNNCTG 1 cut(s) 1692
CfoI GCGC 2 cut(s) 194, 1507
Cfr13I GGNCC 5 cut(s) 22, 81, 779, 1455, 1925
ClaI ATCGAT 1 cut(s) 69
CsiI ACCWGGT 2 cut(s) 879, 1927
Csp6I GTAC 6 cut(s) 505, 1119, 1272, 1572, 1620, 1779
CviAII CATG 9 cut(s) 246, 251, 1404, 1586, 1634, 1669, 1773, 1888, 1965
CviQI GTAC 6 cut(s) 505, 1119, 1272, 1572, 1620, 1779
DdeI CTNAG 7 cut(s) 687, 1094, 1490, 1575, 1616, 1839, 1953
DraIII CACNNNGTG 1 cut(s) 570
DrdI GACNNNNNNGTC 1 cut(s) 884
DseDI GACNNNNNNGTC 1 cut(s) 884
EaeI YGGCCR 2 cut(s) 213, 1375
EagI CGGCCG 1 cut(s) 213
Ecl136II GAGCTC 2 cut(s) 686, 772
EclXI CGGCCG 1 cut(s) 213
Eco130I CCWWGG 2 cut(s) 1372, 1668
Eco147I AGGCCT 1 cut(s) 271
Eco24I GRGCYC 2 cut(s) 688, 774
Eco31I GGTCTC 2 cut(s) 131, 606
Eco47I GGWCC 4 cut(s) 22, 81, 1455, 1925
Eco47III AGCGCT 1 cut(s) 1506
Eco52I CGGCCG 1 cut(s) 213
Eco53kI GAGCTC 2 cut(s) 686, 772
Eco57I CTGAAG 1 cut(s) 999
Eco81I CCTNAGG 1 cut(s) 1839
Eco91I GGTNACC 1 cut(s) 875
EcoICRI GAGCTC 2 cut(s) 686, 772
EcoO65I GGTNACC 1 cut(s) 875
EcoRI GAATTC 1 cut(s) 1823
EcoRII CCWGG 7 cut(s) 77, 427, 453, 783, 879, 888, 1927
EcoT14I CCWWGG 2 cut(s) 1372, 1668
EcoT22I ATGCAT 1 cut(s) 730
EcoT38I GRGCYC 2 cut(s) 688, 774
ErhI CCWWGG 2 cut(s) 1372, 1668
FaeI CATG 9 cut(s) 249, 254, 1407, 1589, 1637, 1672, 1776, 1891, 1968
FalI AAGNNNNNCTT 4 cut(s) 359, 391, 972, 1004
FaqI GGGAC 3 cut(s) 145, 278, 473
FatI CATG 9 cut(s) 245, 250, 1403, 1585, 1633, 1668, 1772, 1887, 1964
FauI CCCGC 2 cut(s) 153, 1870
FblI GTMKAC 1 cut(s) 1386
FokI GGATG 3 cut(s) 662, 668, 1440
FriOI GRGCYC 2 cut(s) 688, 774
FspBI CTAG 6 cut(s) 635, 680, 1358, 1442, 1566, 1946
GlaI GCGC 2 cut(s) 193, 1506
GsaI CCCAGC 1 cut(s) 153
GsuI CTGGAG 2 cut(s) 184, 612
HaeII RGCGCY 2 cut(s) 195, 1508
HaeIII GGCC 5 cut(s) 215, 271, 780, 1377, 1440
HapII CCGG 1 cut(s) 1395
HhaI GCGC 2 cut(s) 194, 1507
Hin1II CATG 9 cut(s) 249, 254, 1407, 1589, 1637, 1672, 1776, 1891, 1968
Hin6I GCGC 2 cut(s) 192, 1505
HinP1I GCGC 2 cut(s) 192, 1505
HincII GTYRAC 2 cut(s) 412, 1903
HindII GTYRAC 2 cut(s) 412, 1903
HindIII AAGCTT 1 cut(s) 329
HinfI GANTC 9 cut(s) 14, 110, 175, 353, 535, 701, 1151, 1741, 1959
HpaI GTTAAC 1 cut(s) 1903
HpaII CCGG 1 cut(s) 1395
HphI GGTGA 3 cut(s) 677, 887, 1943
Hpy166II GTNNAC 5 cut(s) 412, 1121, 1387, 1779, 1903
Hpy188I TCNGA 9 cut(s) 115, 174, 232, 700, 1116, 1401, 1459, 1549, 1578
Hpy188III TCNNGA 7 cut(s) 181, 541, 722, 1086, 1211, 1817, 1923
Hpy8I GTNNAC 5 cut(s) 412, 1121, 1387, 1779, 1903
Hpy99I CGWCG 2 cut(s) 107, 110
HpyAV CCTTC 3 cut(s) 318, 543, 1417
HpyCH4III ACNGT 4 cut(s) 343, 618, 959, 1384
HpyCH4IV ACGT 2 cut(s) 414, 741
HpyF10VI GCNNNNNNNGC 8 cut(s) 83, 328, 865, 950, 959, 1437, 1507, 1566
HpyF3I CTNAG 7 cut(s) 687, 1094, 1490, 1575, 1616, 1839, 1953
HpySE526I ACGT 2 cut(s) 414, 741
Hsp92II CATG 9 cut(s) 249, 254, 1407, 1589, 1637, 1672, 1776, 1891, 1968
HspAI GCGC 2 cut(s) 192, 1505
KspAI GTTAAC 1 cut(s) 1903
LmnI GCTCC 3 cut(s) 468, 683, 1472
Lsp1109I GCAGC 7 cut(s) 201, 571, 574, 663, 949, 1494, 1698
LweI GCATC 5 cut(s) 658, 715, 1236, 1418, 1924
MabI ACCWGGT 2 cut(s) 879, 1927
MaeI CTAG 6 cut(s) 635, 680, 1358, 1442, 1566, 1946
MaeII ACGT 2 cut(s) 414, 741
MaeIII GTNAC 8 cut(s) 208, 343, 875, 1211, 1246, 1353, 1629, 1654
MbiI CCGCTC 1 cut(s) 86
MfeI CAATTG 3 cut(s) 302, 1010, 1896
MflI RGATCY 4 cut(s) 115, 555, 1105, 1800
MhlI GDGCHC 3 cut(s) 473, 688, 774
MlsI TGGCCA 1 cut(s) 1377
MluNI TGGCCA 1 cut(s) 1377
MlyI GAGTC 2 cut(s) 8, 1735
MmeI TCCRAC 2 cut(s) 375, 627
Mox20I TGGCCA 1 cut(s) 1377
Mph1103I ATGCAT 1 cut(s) 730
MroXI GAANNNNTTC 3 cut(s) 371, 1602, 1716
MscI TGGCCA 1 cut(s) 1377
MseI TTAA 3 cut(s) 1367, 1902, 1996
MslI CAYNNNNRTG 3 cut(s) 244, 443, 579
Msp20I TGGCCA 1 cut(s) 1377
MspA1I CMGCKG 2 cut(s) 153, 204
MspI CCGG 1 cut(s) 1395
MspR9I CCNGG 7 cut(s) 79, 429, 455, 785, 881, 890, 1929
MunI CAATTG 3 cut(s) 302, 1010, 1896
Mva1269I GAATGC 1 cut(s) 296
MvaI CCWGG 7 cut(s) 79, 429, 455, 785, 881, 890, 1929
MvnI CGCG 1 cut(s) 218
MwoI GCNNNNNNNGC 8 cut(s) 83, 328, 865, 950, 959, 1437, 1507, 1566
NcoI CCATGG 1 cut(s) 1668
NheI GCTAGC 1 cut(s) 1945
NlaIII CATG 9 cut(s) 249, 254, 1407, 1589, 1637, 1672, 1776, 1891, 1968
NlaIV GGNNCC 6 cut(s) 117, 433, 572, 781, 850, 1023
NmuCI GTSAC 5 cut(s) 343, 875, 1211, 1353, 1629
NsiI ATGCAT 1 cut(s) 730
NspI RCATGY 2 cut(s) 1407, 1637
NspV TTCGAA 1 cut(s) 335
PasI CCCWGGG 1 cut(s) 454
PceI AGGCCT 1 cut(s) 271
PctI GAATGC 1 cut(s) 296
PdmI GAANNNNTTC 3 cut(s) 371, 1602, 1716
PfeI GAWTC 7 cut(s) 110, 175, 353, 535, 701, 1151, 1959
PleI GAGTC 2 cut(s) 8, 1735
PpsI GAGTC 2 cut(s) 8, 1735
Psp124BI GAGCTC 2 cut(s) 688, 774
Psp1406I AACGTT 2 cut(s) 414, 741
Psp6I CCWGG 7 cut(s) 77, 427, 453, 783, 879, 888, 1927
PspEI GGTNACC 1 cut(s) 875
PspFI CCCAGC 1 cut(s) 149
PspGI CCWGG 7 cut(s) 77, 427, 453, 783, 879, 888, 1927
PspN4I GGNNCC 6 cut(s) 117, 433, 572, 781, 850, 1023
PspPI GGNCC 5 cut(s) 22, 81, 779, 1455, 1925
PstI CTGCAG 1 cut(s) 191
PstNI CAGNNNCTG 1 cut(s) 1692
PsuI RGATCY 4 cut(s) 115, 555, 1105, 1800
PvuII CAGCTG 1 cut(s) 153
RsaI GTAC 6 cut(s) 506, 1120, 1273, 1573, 1621, 1780
RsaNI GTAC 6 cut(s) 505, 1119, 1272, 1572, 1620, 1779
RseI CAYNNNNRTG 3 cut(s) 244, 443, 579
SacI GAGCTC 2 cut(s) 688, 774
SaqAI TTAA 3 cut(s) 1367, 1902, 1996
Sau96I GGNCC 5 cut(s) 22, 81, 779, 1455, 1925
SchI GAGTC 2 cut(s) 8, 1735
ScrFI CCNGG 7 cut(s) 79, 429, 455, 785, 881, 890, 1929
SduI GDGCHC 3 cut(s) 473, 688, 774
SexAI ACCWGGT 2 cut(s) 879, 1927
SfaNI GCATC 5 cut(s) 658, 715, 1236, 1418, 1924
SfcI CTRYAG 2 cut(s) 187, 1794
SfuI TTCGAA 1 cut(s) 335
SinI GGWCC 4 cut(s) 22, 81, 1455, 1925
SmiMI CAYNNNNRTG 3 cut(s) 244, 443, 579
SmlI CTYRAG 3 cut(s) 179, 539, 1131
SmoI CTYRAG 3 cut(s) 179, 539, 1131
SseBI AGGCCT 1 cut(s) 271
SspI AATATT 1 cut(s) 1349
SspMI CTAG 6 cut(s) 635, 680, 1358, 1442, 1566, 1946
SstI GAGCTC 2 cut(s) 688, 774
StuI AGGCCT 1 cut(s) 271
StyD4I CCNGG 7 cut(s) 77, 427, 453, 783, 879, 888, 1927
StyI CCWWGG 2 cut(s) 1372, 1668
TaaI ACNGT 4 cut(s) 343, 618, 959, 1384
TaiI ACGT 2 cut(s) 417, 744
TaqI TCGA 6 cut(s) 12, 69, 102, 335, 613, 793
TatI WGTACW 4 cut(s) 1118, 1571, 1619, 1778
TauI GCSGC 3 cut(s) 207, 218, 1074
TfiI GAWTC 7 cut(s) 110, 175, 353, 535, 701, 1151, 1959
Tru1I TTAA 3 cut(s) 1367, 1902, 1996
Tru9I TTAA 3 cut(s) 1367, 1902, 1996
TscAI CASTG 8 cut(s) 346, 408, 910, 930, 964, 1065, 1318, 1989
TseFI GTSAC 5 cut(s) 343, 875, 1211, 1353, 1629
TseI GCWGC 7 cut(s) 189, 584, 587, 676, 962, 1507, 1686
Tsp45I GTSAC 5 cut(s) 343, 875, 1211, 1353, 1629
TspGWI ACGGA 3 cut(s) 138, 149, 302
TspRI CASTG 8 cut(s) 346, 408, 910, 930, 964, 1065, 1318, 1989
VpaK11BI GGWCC 4 cut(s) 22, 81, 1455, 1925
XapI RAATTY 4 cut(s) 62, 370, 992, 1823
XceI RCATGY 2 cut(s) 1407, 1637
XmiI GTMKAC 1 cut(s) 1386
XmnI GAANNNNTTC 3 cut(s) 371, 1602, 1716
XspI CTAG 6 cut(s) 635, 680, 1358, 1442, 1566, 1946
Zsp2I ATGCAT 1 cut(s) 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.