MD13G1155000.v1.1

Cell division control protein 24, OB domain 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0014037
Physical Location & Seq
Reverse (-)
12080733 .. 12084899
4167 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1155000.v1.1.491

Sequence Viewer

Length: 1998 bp
ATGAACTCAATCAACTCGGCCATGGACATCGATGAGCAGAAAGACCACGAAGATCCGCTTCTCAAATTCATCGATTACGCCAGGTCCGTCCTCTCGCCCGAAACGGACGAAAATCTGGATCCGAATCAAAACGGACCGGAGACCAGTACTCGACCCAGCTGGAACTGGACCGCCTCTCGGATCCTCAAGACTTGCAGCGCCTACTCCAGCGGCGTCACCACCGCGATTCTGCTCTCAGACCTCGCCCAGGCGTGGAGCGAGCAGCGTAGGGACAGGCCTCTGAAGAAGATGCCGGAATGCGTGAAGCAGTTGAGGAAGAAGCATAAGAGGCGGAAGCTTCCGAACACCGTGACGATTGACTCCATTTATGAGAAGAATTTCTTGTCATTGAGTAGTGTTTTGGAGGCCGTTGTTGTGGAGGCTTTTGTTCTTCCGGGTACCAACATCCATATGCTTTCCTTGGGGGATTACTGGAGCTCCAATACCATTGACATTTATCTCCACCGCCGGTACTGTGACTTAGTAGATCCCCGTAATGGGATTCTGAAGAAGGGGAGGGAGATCTTCCTCACTGGGTGCTATCTTCGTCCTGCCACCGGAGGAGGATCTAGCTATCCGCGGTTGTTGCCAACAGAATATCTAGTGATATTGCTAGATGAGGATGACGATGGTGATTCATTGTTGATAGGAGCTAAGTTTTATTCGGATTCATTCTCTTCAATTTCTGCAGCTAATAAAGATGTCCCTTATTCATTGTATGCAAGAATTGAATCTATTGGGCCACTGGAAGTTCATGGGAAGTTTGGAACTTTACAGAGAAAACAAATTACTCTTGTTAACGAAGATGATGTCAAGCTACAATTTCTGCTGTGGGGTGATCAGGTTGTCCTGGCCAATCTTTTGAGTGTGGGAAGTATGCTTGCACTGGATAAACCATATGTCTCTAGAGCTATAGATAGTGGTATCGAAACAAGTGGTGAAGTTTGCCTTGAATTTGGTAGCGCAACGCAATTGTTTTTGGTGCCTTTCATTCAACATGAGGAGCAAGTATGTGTAGCACTGACACCAAATCGGTATCAAGGGTCAAGACTTCTGAGCACAATAGATCCCAGTCAGGGTCCACAAGTCTCTCAAGTTTCTTTGCCATGTGATTCACATGGGTCTATTGACTTCAGTAGCTATCCTTTCCGATCATTTGTTTCTGGCCTTCGTGACAAGATGACTGGTGTCAGTCTTTATGGTGTTGTTACCAATATTTTCAAAGAAAAACATACCGCAGAAGCAGTTTTCTCCTTGAGAATTGAAGATACCACTGGACCAATTTGGGCAAAGTTTCATTTTGTGAAGAATTGGTCGCTCGGAAGGTTAAGCCTTGGTCACACAGTGTACATATCAGGCCTGACATGCTCTATGACAAAGCGGAAGTGCTTGGAAGCATCATGGTTTGAGAACAGTGCTGGAGCTTCTTTCTTCAACCTCAGTTGCTTGCCAGCATTACTAAATTCATCTTGTCTTCGTAAGTTGTCAAGACTCGCTGATCTATCCAGCCAGGGTAGCTGCACGCAGATAGTTCAGGTTTGGGCAGTTTGGCTGGGGGCTCAGTCCAATGTCAGTACAAGATTTTCACATACCACATGTGGTCATTTCGTTACCGAGCTCCCCAATGGGGTTATGGAGTGTGGCTTCTGTAATGACAACAACTGTGGCGCTGCAGTTATCCGCACTTTCCACCTGAAAATCACTCTCGCAGACGAGAGTGGGAAGGTTTTTGCGTGGTGTACTGGTCATGCTGCTGCAGAGTTGCTGCAAATATCTCCTGACGAATTCCATGAACTGCCTGAGGATGAACAAGATATGTATCTGGCGTCATTAGCGAAAGAGCGATTCACGGTCGCGATTGTTAACTGCAAGCGGGAGGGTTGTGAAGGCAGTGATGCTCTTATGCAAGAAATTGAAGGCGTCTCATGGGAGATCACTCGGGCATTGAACAATGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
CDC24_OB1 CDC24_OB2 CDC24_OB3

Protein Analysis

666

Amino Acids

73.89

Weight (kDa)

5.5

Isoelectric Point (pI)

43.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CDC24_OB1 PF17246 21 - 148 1.2e-45 Cell division control protein 24, OB domain 1
CDC24_OB2 PF17245 154 - 281 9.9e-42 Cell division control protein 24, OB domain 2
CDC24_OB3 PF17244 403 - 624 7.6e-80 Cell division control protein 24, OB domain 3
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014037)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G17030
fragaria_vesca FvH4_4g19640
malus_domestica MD13G1155000.v1.1
prunus_persica Prupe.1G118000_v2.0.a1
pyrus_communis pycom13g13180
rosa_chinensis RchiOBHm_Chr4g0424901 RchiOBHm_Chr4g0424931
rosa_laevigata RLG00000007411
rosa_multiflora Rmu_sc0006754.1_g000002 Rmu_ssc0000420.1_g000005
rosa_roxburghii Rroxscaffold_5G00367120
rosa_rugosa Rorug04G0200500
rosa_samantha Rh4AG257900 Rh4BG263300 Rh4CG274300 Rh4DG259000
rosa_wichuraiana Rw4G022260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 437
AccB1I GGYRCC 2 cut(s) 437, 1021
AccII CGCG 3 cut(s) 224, 619, 1895
AclWI GGATC 8 cut(s) 47, 113, 126, 175, 188, 521, 613, 1100
AcoI YGGCCR 2 cut(s) 18, 891
AcsI RAATTY 5 cut(s) 65, 376, 992, 1501, 1823
AcuI CTGAAG 3 cut(s) 302, 566, 1156
AcyI GRCGYC 3 cut(s) 213, 1865, 1959
AdeI CACNNNGTG 2 cut(s) 576, 1384
AfaI GTAC 6 cut(s) 148, 439, 512, 1388, 1615, 1780
AfiI CCNNNNNNNGG 8 cut(s) 177, 247, 252, 536, 537, 596, 1115, 1666
AflIII ACRYGT 1 cut(s) 1634
AgsI TTSAA 9 cut(s) 720, 770, 992, 1034, 1261, 1304, 1474, 1955, 1987
AjnI CCWGG 4 cut(s) 80, 246, 888, 1548
Alw21I GWGCWC 3 cut(s) 479, 1100, 1659
Alw26I GTCTC 4 cut(s) 134, 946, 1132, 1966
AlwI GGATC 8 cut(s) 47, 113, 126, 175, 188, 521, 613, 1100
Ama87I CYCGRG 1 cut(s) 1977
AoxI GGCC 7 cut(s) 18, 275, 405, 779, 891, 1204, 1396
ApeKI GCWGC 8 cut(s) 195, 262, 728, 1557, 1709, 1790, 1793, 1804
ApoI RAATTY 5 cut(s) 65, 376, 992, 1501, 1823
ArsI GACNNNNNNTTYG 2 cut(s) 834, 866
Asp700I GAANNNNTTC 1 cut(s) 377
Asp718I GGTACC 1 cut(s) 437
AspLEI GCGC 3 cut(s) 200, 1004, 1709
AspS9I GGNCC 6 cut(s) 84, 134, 168, 779, 1118, 1316
AsuC2I CCSGG 1 cut(s) 435
AsuHPI GGTGA 4 cut(s) 208, 683, 887, 989
AvaI CYCGRG 1 cut(s) 1977
AvaII GGWCC 5 cut(s) 84, 134, 168, 1118, 1316
AxyI CCTNAGG 1 cut(s) 1839
BalI TGGCCA 1 cut(s) 893
BamHI GGATCC 2 cut(s) 118, 180
BanI GGYRCC 2 cut(s) 437, 1021
BanII GRGCYC 3 cut(s) 479, 1600, 1659
BbsI GAAGAC 1 cut(s) 1505
Bbv12I GWGCWC 3 cut(s) 479, 1100, 1659
BbvI GCAGC 8 cut(s) 207, 274, 740, 1544, 1696, 1777, 1780, 1791
BccI CCATC 1 cut(s) 662
BceAI ACGGC 1 cut(s) 392
BciT130I CCWGG 4 cut(s) 82, 248, 890, 1550
BclI TGATCA 1 cut(s) 877
BcnI CCSGG 1 cut(s) 435
BcoDI GTCTC 4 cut(s) 134, 946, 1132, 1966
BfaI CTAG 4 cut(s) 609, 641, 653, 945
BfmI CTRYAG 4 cut(s) 726, 951, 1710, 1794
BfoI RGCGCY 2 cut(s) 201, 1710
BglII AGATCT 1 cut(s) 561
BisI GCNGC 9 cut(s) 196, 211, 263, 729, 1558, 1710, 1791, 1794, 1805
BlsI GCNGC 9 cut(s) 197, 212, 264, 730, 1559, 1711, 1792, 1795, 1806
BmcAI AGTACT 1 cut(s) 148
Bme1390I CCNGG 5 cut(s) 82, 248, 435, 890, 1550
Bme18I GGWCC 5 cut(s) 84, 134, 168, 1118, 1316
BmeT110I CYCGRG 1 cut(s) 1977
BmgT120I GGNCC 6 cut(s) 84, 134, 168, 779, 1118, 1316
BmiI GGNNCC 5 cut(s) 120, 182, 439, 1023, 1119
BmrFI CCNGG 5 cut(s) 82, 248, 435, 890, 1550
BmrI ACTGGG 2 cut(s) 582, 1104
BmsI GCATC 3 cut(s) 279, 1445, 1924
BmuI ACTGGG 2 cut(s) 582, 1104
BoxI GACNNNNGTC 1 cut(s) 1226
BpiI GAAGAC 1 cut(s) 1505
BpmI CTGGAG 3 cut(s) 190, 493, 1479
BpuEI CTTGAG 3 cut(s) 170, 1116, 1315
BpuMI CCSGG 1 cut(s) 435
Bsa29I ATCGAT 2 cut(s) 30, 72
BsaBI GATNNNNATC 2 cut(s) 123, 1857
BsaHI GRCGYC 3 cut(s) 213, 1865, 1959
BsaI GGTCTC 1 cut(s) 134
BsaJI CCNNGG 6 cut(s) 21, 246, 459, 617, 1372, 1549
BsaWI WCCGGW 2 cut(s) 136, 596
BsaXI ACNNNNNCTCC 2 cut(s) 461, 491
Bsc4I CCNNNNNNNGG 8 cut(s) 177, 247, 252, 536, 537, 596, 1115, 1666
Bse118I RCCGGY 1 cut(s) 507
Bse21I CCTNAGG 1 cut(s) 1839
Bse8I GATNNNNATC 2 cut(s) 123, 1857
BseBI CCWGG 4 cut(s) 82, 248, 890, 1550
BseCI ATCGAT 2 cut(s) 30, 72
BseDI CCNNGG 6 cut(s) 21, 246, 459, 617, 1372, 1549
BseGI GGATG 3 cut(s) 444, 667, 1849
BseJI GATNNNNATC 2 cut(s) 123, 1857
BseLI CCNNNNNNNGG 8 cut(s) 177, 247, 252, 536, 537, 596, 1115, 1666
BseMII CTCAG 5 cut(s) 249, 1085, 1492, 1613, 1830
BseRI GAGGAG 2 cut(s) 615, 1055
BseXI GCAGC 8 cut(s) 207, 274, 740, 1544, 1696, 1777, 1780, 1791
BseYI CCCAGC 2 cut(s) 155, 1591
BsgI GTGCAG 1 cut(s) 1543
Bsh1236I CGCG 3 cut(s) 224, 619, 1895
Bsh1285I CGRYCG 1 cut(s) 1893
BshFI GGCC 7 cut(s) 20, 277, 407, 781, 893, 1206, 1398
BshNI GGYRCC 2 cut(s) 437, 1021
BshVI ATCGAT 2 cut(s) 30, 72
BsiEI CGRYCG 1 cut(s) 1893
BsiHKAI GWGCWC 3 cut(s) 479, 1100, 1659
BsiHKCI CYCGRG 1 cut(s) 1977
BsiSI CCGG 5 cut(s) 137, 293, 434, 508, 597
BslFI GGGAC 2 cut(s) 284, 728
BslI CCNNNNNNNGG 8 cut(s) 177, 247, 252, 536, 537, 596, 1115, 1666
BsmAI GTCTC 4 cut(s) 134, 946, 1132, 1966
BsmBI CGTCTC 1 cut(s) 1966
BsmFI GGGAC 2 cut(s) 284, 728
BsmI GAATGC 1 cut(s) 302
BsnI GGCC 7 cut(s) 20, 277, 407, 781, 893, 1206, 1398
Bso31I GGTCTC 1 cut(s) 134
BsoBI CYCGRG 1 cut(s) 1977
Bsp1286I GDGCHC 4 cut(s) 479, 1100, 1600, 1659
Bsp1407I TGTACA 1 cut(s) 1386
Bsp19I CCATGG 1 cut(s) 21
Bsp68I TCGCGA 1 cut(s) 1895
BspANI GGCC 7 cut(s) 20, 277, 407, 781, 893, 1206, 1398
BspCNI CTCAG 5 cut(s) 248, 1086, 1491, 1612, 1831
BspDI ATCGAT 2 cut(s) 30, 72
BspFNI CGCG 3 cut(s) 224, 619, 1895
BspLI GGNNCC 5 cut(s) 120, 182, 439, 1023, 1119
BspMAI CTGCAG 3 cut(s) 730, 1714, 1798
BspPI GGATC 8 cut(s) 47, 113, 126, 175, 188, 521, 613, 1100
BspT107I GGYRCC 2 cut(s) 437, 1021
BspTNI GGTCTC 1 cut(s) 134
BsrFI RCCGGY 1 cut(s) 507
BsrGI TGTACA 1 cut(s) 1386
BssAI RCCGGY 1 cut(s) 507
BssECI CCNNGG 6 cut(s) 21, 246, 459, 617, 1372, 1549
BssNI GRCGYC 3 cut(s) 213, 1865, 1959
BssT1I CCWWGG 3 cut(s) 21, 459, 1372
Bst2UI CCWGG 4 cut(s) 82, 248, 890, 1550
Bst4CI ACNGT 6 cut(s) 349, 515, 1384, 1454, 1703, 1891
Bst6I CTCTTC 1 cut(s) 721
BstACI GRCGYC 3 cut(s) 213, 1865, 1959
BstAUI TGTACA 1 cut(s) 1386
BstC8I GCNNGC 6 cut(s) 260, 921, 1487, 1491, 1562, 1910
BstDEI CTNAG 7 cut(s) 235, 520, 693, 1094, 1478, 1599, 1839
BstDSI CCRYGG 2 cut(s) 21, 617
BstENI CCTNNNNNAGG 1 cut(s) 245
BstF5I GGATG 3 cut(s) 444, 667, 1849
BstFNI CGCG 3 cut(s) 224, 619, 1895
BstH2I RGCGCY 2 cut(s) 201, 1710
BstHHI GCGC 3 cut(s) 200, 1004, 1709
BstMAI GTCTC 4 cut(s) 134, 946, 1132, 1966
BstMCI CGRYCG 1 cut(s) 1893
BstMWI GCNNNNNNNGC 5 cut(s) 328, 625, 1404, 1554, 1871
BstNI CCWGG 4 cut(s) 82, 248, 890, 1550
BstNSI RCATGY 2 cut(s) 1407, 1638
BstPAI GACNNNNGTC 1 cut(s) 1226
BstSCI CCNGG 5 cut(s) 80, 246, 433, 888, 1548
BstSFI CTRYAG 4 cut(s) 726, 951, 1710, 1794
BstUI CGCG 3 cut(s) 224, 619, 1895
BstV1I GCAGC 8 cut(s) 207, 274, 740, 1544, 1696, 1777, 1780, 1791
BstV2I GAAGAC 1 cut(s) 1505
BstX2I RGATCY 7 cut(s) 52, 118, 180, 526, 561, 605, 1105
BstYI RGATCY 7 cut(s) 52, 118, 180, 526, 561, 605, 1105
Bsu15I ATCGAT 2 cut(s) 30, 72
Bsu36I CCTNAGG 1 cut(s) 1839
BsuRI GGCC 7 cut(s) 20, 277, 407, 781, 893, 1206, 1398
BsuTUI ATCGAT 2 cut(s) 30, 72
BtgI CCRYGG 2 cut(s) 21, 617
BtsCI GGATG 3 cut(s) 444, 667, 1849
BtsI GCAGTG 1 cut(s) 1936
BtsIMutI CAGTG 8 cut(s) 570, 782, 923, 1058, 1311, 1389, 1459, 1936
BtuMI TCGCGA 1 cut(s) 1895
Cac8I GCNNGC 6 cut(s) 260, 921, 1487, 1491, 1562, 1910
CfoI GCGC 3 cut(s) 200, 1004, 1709
Cfr10I RCCGGY 1 cut(s) 507
Cfr13I GGNCC 6 cut(s) 84, 134, 168, 779, 1118, 1316
Cfr42I CCGCGG 1 cut(s) 620
ClaI ATCGAT 2 cut(s) 30, 72
CpoI CGGWCCG 1 cut(s) 134
CseI GACGC 3 cut(s) 202, 1854, 1948
Csp6I GTAC 6 cut(s) 147, 438, 511, 1387, 1614, 1779
CspCI CAANNNNNGTGG 2 cut(s) 1684, 1719
CspI CGGWCCG 1 cut(s) 134
CviQI GTAC 6 cut(s) 147, 438, 511, 1387, 1614, 1779
DdeI CTNAG 7 cut(s) 235, 520, 693, 1094, 1478, 1599, 1839
DraIII CACNNNGTG 2 cut(s) 576, 1384
EaeI YGGCCR 2 cut(s) 18, 891
Eam1104I CTCTTC 1 cut(s) 721
EarI CTCTTC 1 cut(s) 721
EciI GGCGGA 1 cut(s) 346
Ecl136II GAGCTC 2 cut(s) 477, 1657
Eco130I CCWWGG 3 cut(s) 21, 459, 1372
Eco147I AGGCCT 2 cut(s) 277, 1398
Eco24I GRGCYC 3 cut(s) 479, 1600, 1659
Eco31I GGTCTC 1 cut(s) 134
Eco47I GGWCC 5 cut(s) 84, 134, 168, 1118, 1316
Eco53kI GAGCTC 2 cut(s) 477, 1657
Eco57I CTGAAG 3 cut(s) 302, 566, 1156
Eco81I CCTNAGG 1 cut(s) 1839
Eco88I CYCGRG 1 cut(s) 1977
EcoICRI GAGCTC 2 cut(s) 477, 1657
EcoNI CCTNNNNNAGG 1 cut(s) 245
EcoRI GAATTC 1 cut(s) 1823
EcoRII CCWGG 4 cut(s) 80, 246, 888, 1548
EcoT14I CCWWGG 3 cut(s) 21, 459, 1372
EcoT38I GRGCYC 3 cut(s) 479, 1600, 1659
ErhI CCWWGG 3 cut(s) 21, 459, 1372
Esp3I CGTCTC 1 cut(s) 1966
FalI AAGNNNNNCTT 6 cut(s) 42, 74, 365, 397, 972, 1004
FaqI GGGAC 2 cut(s) 284, 728
FauI CCCGC 1 cut(s) 1905
FauNDI CATATG 2 cut(s) 450, 937
FbaI TGATCA 1 cut(s) 877
Fnu4HI GCNGC 9 cut(s) 196, 211, 263, 729, 1558, 1710, 1791, 1794, 1805
FokI GGATG 3 cut(s) 431, 674, 1856
FriOI GRGCYC 3 cut(s) 479, 1600, 1659
Fsp4HI GCNGC 9 cut(s) 196, 211, 263, 729, 1558, 1710, 1791, 1794, 1805
FspBI CTAG 4 cut(s) 609, 641, 653, 945
GlaI GCGC 3 cut(s) 199, 1003, 1708
GluI GCNGC 9 cut(s) 196, 211, 263, 729, 1558, 1710, 1791, 1794, 1805
GsaI CCCAGC 2 cut(s) 159, 1595
GsuI CTGGAG 3 cut(s) 190, 493, 1479
HaeII RGCGCY 2 cut(s) 201, 1710
HaeIII GGCC 7 cut(s) 20, 277, 407, 781, 893, 1206, 1398
HapII CCGG 5 cut(s) 137, 293, 434, 508, 597
HgaI GACGC 3 cut(s) 202, 1854, 1948
HhaI GCGC 3 cut(s) 200, 1004, 1709
Hin1I GRCGYC 3 cut(s) 213, 1865, 1959
Hin6I GCGC 3 cut(s) 198, 1002, 1707
HinP1I GCGC 3 cut(s) 198, 1002, 1707
HincII GTYRAC 2 cut(s) 838, 1903
HindII GTYRAC 2 cut(s) 838, 1903
HindIII AAGCTT 1 cut(s) 335
HpaI GTTAAC 2 cut(s) 838, 1903
HpaII CCGG 5 cut(s) 137, 293, 434, 508, 597
HphI GGTGA 4 cut(s) 208, 683, 887, 989
Hpy166II GTNNAC 5 cut(s) 838, 1121, 1387, 1779, 1903
Hpy188III TCNNGA 8 cut(s) 116, 187, 945, 1086, 1211, 1527, 1817, 1894
Hpy8I GTNNAC 5 cut(s) 838, 1121, 1387, 1779, 1903
HpyAV CCTTC 6 cut(s) 544, 1217, 1356, 1756, 1919, 1949
HpyCH4III ACNGT 6 cut(s) 349, 515, 1384, 1454, 1703, 1891
HpyF10VI GCNNNNNNNGC 5 cut(s) 328, 625, 1404, 1554, 1871
HpyF3I CTNAG 7 cut(s) 235, 520, 693, 1094, 1478, 1599, 1839
Hsp92I GRCGYC 3 cut(s) 213, 1865, 1959
HspAI GCGC 3 cut(s) 198, 1002, 1707
KpnI GGTACC 1 cut(s) 441
Ksp22I TGATCA 1 cut(s) 877
KspAI GTTAAC 2 cut(s) 838, 1903
KspI CCGCGG 1 cut(s) 620
LmnI GCTCC 7 cut(s) 255, 474, 482, 689, 1042, 1460, 1662
Lsp1109I GCAGC 8 cut(s) 207, 274, 740, 1544, 1696, 1777, 1780, 1791
LweI GCATC 3 cut(s) 279, 1445, 1924
MaeI CTAG 4 cut(s) 609, 641, 653, 945
MaeIII GTNAC 7 cut(s) 214, 349, 515, 1211, 1246, 1376, 1648
MfeI CAATTG 1 cut(s) 1010
MflI RGATCY 7 cut(s) 52, 118, 180, 526, 561, 605, 1105
MhlI GDGCHC 4 cut(s) 479, 1100, 1600, 1659
MlsI TGGCCA 1 cut(s) 893
MluNI TGGCCA 1 cut(s) 893
MlyI GAGTC 2 cut(s) 353, 1524
Mox20I TGGCCA 1 cut(s) 893
MroXI GAANNNNTTC 1 cut(s) 377
MscI TGGCCA 1 cut(s) 893
MseI TTAA 3 cut(s) 837, 1367, 1902
MslI CAYNNNNRTG 1 cut(s) 449
Msp20I TGGCCA 1 cut(s) 893
MspA1I CMGCKG 3 cut(s) 159, 210, 619
MspI CCGG 5 cut(s) 137, 293, 434, 508, 597
MspR9I CCNGG 5 cut(s) 82, 248, 435, 890, 1550
MunI CAATTG 1 cut(s) 1010
Mva1269I GAATGC 1 cut(s) 302
MvaI CCWGG 4 cut(s) 82, 248, 890, 1550
MvnI CGCG 3 cut(s) 224, 619, 1895
MwoI GCNNNNNNNGC 5 cut(s) 328, 625, 1404, 1554, 1871
NciI CCSGG 1 cut(s) 435
NcoI CCATGG 1 cut(s) 21
NdeI CATATG 2 cut(s) 450, 937
NlaIV GGNNCC 5 cut(s) 120, 182, 439, 1023, 1119
NmuCI GTSAC 5 cut(s) 214, 349, 515, 1211, 1376
NruI TCGCGA 1 cut(s) 1895
NspI RCATGY 2 cut(s) 1407, 1638
PceI AGGCCT 2 cut(s) 277, 1398
PciI ACATGT 1 cut(s) 1634
PcsI WCGNNNNNNNCGW 1 cut(s) 84
PctI GAATGC 1 cut(s) 302
PdmI GAANNNNTTC 1 cut(s) 377
PfeI GAWTC 8 cut(s) 124, 226, 541, 674, 707, 770, 1151, 1884
PkrI GCNGC 9 cut(s) 197, 212, 264, 730, 1559, 1711, 1792, 1795, 1806
PleI GAGTC 2 cut(s) 353, 1524
PpsI GAGTC 2 cut(s) 353, 1524
PscI ACATGT 1 cut(s) 1634
PshAI GACNNNNGTC 1 cut(s) 1226
Psp124BI GAGCTC 2 cut(s) 479, 1659
Psp6I CCWGG 4 cut(s) 80, 246, 888, 1548
PspFI CCCAGC 2 cut(s) 155, 1591
PspGI CCWGG 4 cut(s) 80, 246, 888, 1548
PspN4I GGNNCC 5 cut(s) 120, 182, 439, 1023, 1119
PspPI GGNCC 6 cut(s) 84, 134, 168, 779, 1118, 1316
PstI CTGCAG 3 cut(s) 730, 1714, 1798
PsuI RGATCY 7 cut(s) 52, 118, 180, 526, 561, 605, 1105
PvuII CAGCTG 1 cut(s) 159
RruI TCGCGA 1 cut(s) 1895
RsaI GTAC 6 cut(s) 148, 439, 512, 1388, 1615, 1780
RsaNI GTAC 6 cut(s) 147, 438, 511, 1387, 1614, 1779
RseI CAYNNNNRTG 1 cut(s) 449
Rsr2I CGGWCCG 1 cut(s) 134
RsrII CGGWCCG 1 cut(s) 134
SacI GAGCTC 2 cut(s) 479, 1659
SacII CCGCGG 1 cut(s) 620
SaqAI TTAA 3 cut(s) 837, 1367, 1902
SatI GCNGC 9 cut(s) 196, 211, 263, 729, 1558, 1710, 1791, 1794, 1805
Sau96I GGNCC 6 cut(s) 84, 134, 168, 779, 1118, 1316
ScaI AGTACT 1 cut(s) 148
SchI GAGTC 2 cut(s) 353, 1524
ScrFI CCNGG 5 cut(s) 82, 248, 435, 890, 1550
SduI GDGCHC 4 cut(s) 479, 1100, 1600, 1659
SfaNI GCATC 3 cut(s) 279, 1445, 1924
SfcI CTRYAG 4 cut(s) 726, 951, 1710, 1794
Sfr303I CCGCGG 1 cut(s) 620
SgrBI CCGCGG 1 cut(s) 620
SinI GGWCC 5 cut(s) 84, 134, 168, 1118, 1316
SmiMI CAYNNNNRTG 1 cut(s) 449
SmlI CTYRAG 3 cut(s) 185, 1131, 1294
SmoI CTYRAG 3 cut(s) 185, 1131, 1294
SseBI AGGCCT 2 cut(s) 277, 1398
SspI AATATT 1 cut(s) 1255
SspMI CTAG 4 cut(s) 609, 641, 653, 945
SstI GAGCTC 2 cut(s) 479, 1659
StuI AGGCCT 2 cut(s) 277, 1398
StyD4I CCNGG 5 cut(s) 80, 246, 433, 888, 1548
StyI CCWWGG 3 cut(s) 21, 459, 1372
TaaI ACNGT 6 cut(s) 349, 515, 1384, 1454, 1703, 1891
TaqI TCGA 4 cut(s) 30, 72, 151, 966
TatI WGTACW 4 cut(s) 146, 1386, 1613, 1778
TauI GCSGC 1 cut(s) 213
TfiI GAWTC 8 cut(s) 124, 226, 541, 674, 707, 770, 1151, 1884
Tru1I TTAA 3 cut(s) 837, 1367, 1902
Tru9I TTAA 3 cut(s) 837, 1367, 1902
TscAI CASTG 8 cut(s) 577, 789, 930, 1065, 1318, 1389, 1459, 1936
TseFI GTSAC 5 cut(s) 214, 349, 515, 1211, 1376
TseI GCWGC 8 cut(s) 195, 262, 728, 1557, 1709, 1790, 1793, 1804
Tsp45I GTSAC 5 cut(s) 214, 349, 515, 1211, 1376
TspGWI ACGGA 3 cut(s) 76, 119, 147
TspRI CASTG 8 cut(s) 577, 789, 930, 1065, 1318, 1389, 1459, 1936
VpaK11BI GGWCC 5 cut(s) 84, 134, 168, 1118, 1316
XagI CCTNNNNNAGG 1 cut(s) 245
XapI RAATTY 5 cut(s) 65, 376, 992, 1501, 1823
XbaI TCTAGA 1 cut(s) 944
XceI RCATGY 2 cut(s) 1407, 1638
XcmI CCANNNNNNNNNTGG 1 cut(s) 1669
XmnI GAANNNNTTC 1 cut(s) 377
XspI CTAG 4 cut(s) 609, 641, 653, 945
ZrmI AGTACT 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.