FvH4_4g19930

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0014038
Physical Location & Seq
Forward (+)
23404489 .. 23409988
5500 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g19930.t2

Sequence Viewer

Length: 2427 bp
ATGGCTTCAACATCACTTCCAATAGCATACGCTCTTGTTATCGCTCTGAGCCTGCTCGCGTTTCAATCCGAGTCTAAACCTCAAGCTTTCCGGAGAGATCCCGGCCACCCTCAGTGGCACCACGGCGCCTTCCACGACGTCCACGAAACCATCCGCTCCGACGTCCGCCGCATGCTCCATTCTCGCGCCGAGGTACCGTTTCAGGTTCCGCTGGAAGTGAATGTGGTGTTGGTTGGCTTCAATCGTGATGGAGGCTACAGGTACTCGGTGGATGCGCACAAGTTGGAGGAGGTGCTCAAGATCAGCTTCCCGGCACACCGGCCTTCGTGCCTTGAGACTGGGGAGCCTCTCGATATCGAGCATCAGATTGTGTACAATGCCTTCCCTGCTGGCCAGCCGGAGCTTATAGCTCTTGAGAAGGCGTTGAAAGAGGCTATGGTTCCTGCAGGAAATGCGAGAGAGACTGAGTTTGGAAGGGAAGTACCTCTATTTGAGGTGGATGCAACTGTCGTGGAACCGGTATTTCAGAGGTTGTATTCCTATATATTCGACACAGACAATTCAGCTGTTTCTGCTGTGGAGTTGGACCGCCAAGTACCAAGTGCAATATTTGTGGTCAATTTTGATAAGGTCAGAATGGACCCTAGGAATAAGGAAATTGATCTTGACAACTTGATGTATGGAAAAATTACACAACTAACTGAGGATGATATGCAAAAACAAGAGGGAGACTATATATATCGCTATCGGTACAATGGAGGAGGTGCATCTCAAGTTTGGCTGGGCTCTGGCAGATATGTAGTGATTGATCTCTCAGCTGGCCCATGCACTTACGGAAAGATTGAAACTGAAGAGGGAACTGTCAGTTCTCGGACCCTGCCACGACTAAGGCATATAATGTTTCCAAGAGGATTTGGTGCAGCTAGTGATCATTCTACACATGATGTATTTGTTGGACAGCTTGCCTCTCTAGTATCCACCACGATTGAGCATATTATAGCTCCGGATGTTAGGTACGAAACTGTTGATCTGACAACAAGGCTGCTTTTACCAATAATTGTGCTGCAAAATCATAATCGGTACAATATTATAGACAAGGGCCACAACTACAGTATAAACATTGAAGCAATTGAGGCACAGGTTAAGAAAATGGTTCATGAGGGGCAAGAAGTTGTGATTGTTGGGGGTTCACATTCATTACATCGCCATGAGAAGTTGGCAATCGCTGTTTCAAAAGCTATGCGAGGTCATTCCCTTCAAGAAACTAAGAATGATGGACGCTTCCATGTTCATACCAAAACATATCTGGATGGTGCTATTCTTAAAGAAGAAATGGAACGTTCTGCTGATGTGCTTGCTGCTGGTTTGCTTGAGGTGGCTGACCCGTCTCTTTCGAGTAAATTTTTCCTCCGCCAGCATTGGAATGATGAATCTGATGGTACAAGTGATTCTATACTCAAACATAAACCTATTTGGTCTACTCATGACAAAAAAGGTGGCAAGAAGAAAAAGAAAATAGTTAGGAAACAAGGCGATCTATACCGAACTTATGGAACAAGAGTTATTCCTGTCTTTGTGCTATCATTGGCTGATGTGGACCCGAACCTTATGATGGAAGACGAAAGTCTTGTATGGACAAGCAAAGATGTAGTGATTGTACTTGAGCATCAAAATGAGCCAATAACTCTCAGTTATGTCTCAGAAACACAGAGAAGGCATGCCCAACCATCTCAGGTACAGCGCCATATATTAGCAGGACTTGCTTCTGCTGTGGCAGGGTTGAGTGCACCATATGAGAAGGCTTCTCATGTACATGAAAGGCCAGTCGTGAATTGGCTATGGGCAGCTGGGTGTCATCCATTTGGACCATTTTCTAATACTTCTCAAGTCAGCCAAATGCTTCAAGATGTTGCATTGAGGAACTCCATATATGCGCGTGTAGATTCTGCACTCCACAAAATTCGTGATACATCGGAGGCTGTACAAACTTTTGCTGCTGAGTATCTGAAAACTCCACTTGGCGAGCCAGTGAAGGGTAAAAAGAACAAAACCACCACTGAGCTATGGGTGGAGAAGTTTTACAAGAAAACCACTAACTTGCCTGAACCATTCCCACATGAATTAGTTGACAGATTGGAGAACTTCTTAAATAACCTTGAGGACCAGCTAGTAGATTTGTCTTCATCCTTGTATGGTCACCGGTTACAAGATGCTCATTTGAACAGTTCAGAGATTCTCCAGAGTTCCATATTTACCCAGCAGTATGTAGATCATGTTTTGGCAAACGAGAGGGAGAAGATGAAATGCTGCAACATTGAGTACAAATATCCAGTGCAGTCATCTCAAACTTATGTCTATGGAGGGATTCTACTTGCCGGATTTGTTGTATATTTCATTGTGATTTTCTTCTCAAACCCTGTACGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

809

Amino Acids

91.2

Weight (kDa)

6.23

Isoelectric Point (pI)

43.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7906 PF25483 69 - 335 3.6e-57 Domain of unknown function (DUF7906)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G16180
fragaria_vesca FvH4_4g19930 FvH4_4g19930
malus_domestica MD16G1152500.v1.1
prunus_persica Prupe.1G115700_v2.0.a1 Prupe.1G115700_v2.0.a1
pyrus_communis pycom16g12970
rosa_chinensis RchiOBHm_Chr4g0425571
rosa_laevigata RLG00000007353
rosa_multiflora Rmu_sc0001900.1_g000001 Rmu_sc0003958.1_g000018
rosa_roxburghii Rroxscaffold_5G00367540
rosa_rugosa Rorug04G0204200
rosa_samantha Rh4AG261100 Rh4BG267000 Rh4CG278200
rosa_wichuraiana Rw4G022610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 141, 165
Acc16I TGCGCA 1 cut(s) 276
Acc65I GGTACC 1 cut(s) 193
AccB1I GGYRCC 3 cut(s) 117, 125, 193
AccBSI CCGCTC 1 cut(s) 156
AccI GTMKAC 1 cut(s) 1478
AccII CGCG 3 cut(s) 59, 186, 1936
AccIII TCCGGA 2 cut(s) 90, 1003
AciI CCGC 6 cut(s) 154, 166, 169, 209, 589, 1411
AclI AACGTT 1 cut(s) 1339
AclWI GGATC 1 cut(s) 92
AcoI YGGCCR 2 cut(s) 103, 391
AcsI RAATTY 2 cut(s) 1400, 1959
AcuI CTGAAG 1 cut(s) 870
AcyI GRCGYC 3 cut(s) 126, 138, 162
AfiI CCNNNNNNNGG 2 cut(s) 1612, 2033
AgeI ACCGGT 2 cut(s) 517, 2199
AjuI GAANNNNNNNTTGG 2 cut(s) 212, 244
Alw21I GWGCWC 2 cut(s) 297, 1789
Alw26I GTCTC 5 cut(s) 329, 455, 723, 1392, 1702
Alw44I GTGCAC 1 cut(s) 1785
AlwI GGATC 1 cut(s) 92
Aor13HI TCCGGA 2 cut(s) 90, 1003
AoxI GGCC 6 cut(s) 103, 320, 391, 820, 1099, 1820
ApaLI GTGCAC 1 cut(s) 1785
ApeKI GCWGC 7 cut(s) 920, 1042, 1063, 1358, 1844, 1994, 2307
ApoI RAATTY 2 cut(s) 1400, 1959
AsiGI ACCGGT 2 cut(s) 517, 2199
Asp718I GGTACC 1 cut(s) 193
AspA2I CCTAGG 1 cut(s) 644
AspLEI GCGC 5 cut(s) 128, 188, 277, 1743, 1936
AspS9I GGNCC 8 cut(s) 586, 640, 821, 873, 1099, 1597, 1865, 2161
AsuC2I CCSGG 2 cut(s) 102, 311
AsuHPI GGTGA 1 cut(s) 2189
AvaII GGWCC 6 cut(s) 586, 640, 873, 1597, 1865, 2161
AvrII CCTAGG 1 cut(s) 644
BaeGI GKGCMC 1 cut(s) 1789
BalI TGGCCA 1 cut(s) 393
BanI GGYRCC 3 cut(s) 117, 125, 193
BanII GRGCYC 1 cut(s) 788
BarI GAAGNNNNNNTAC 2 cut(s) 365, 397
BbsI GAAGAC 2 cut(s) 1623, 2172
Bbv12I GWGCWC 2 cut(s) 297, 1789
BbvI GCAGC 7 cut(s) 932, 1029, 1050, 1345, 1856, 1981, 2294
BccI CCATC 7 cut(s) 158, 242, 1268, 1304, 1430, 1606, 1735
BceAI ACGGC 1 cut(s) 139
BciVI GTATCC 1 cut(s) 985
BclI TGATCA 1 cut(s) 928
BcnI CCSGG 2 cut(s) 102, 311
BcoDI GTCTC 5 cut(s) 329, 455, 723, 1392, 1702
BfaI CTAG 4 cut(s) 645, 924, 971, 2168
BfmI CTRYAG 3 cut(s) 256, 444, 1108
BfoI RGCGCY 2 cut(s) 129, 1744
BfuI GTATCC 1 cut(s) 985
BisI GCNGC 8 cut(s) 169, 921, 1043, 1064, 1359, 1845, 1995, 2308
BlnI CCTAGG 1 cut(s) 644
BlsI GCNGC 8 cut(s) 170, 922, 1044, 1065, 1360, 1846, 1996, 2309
Bme1390I CCNGG 2 cut(s) 102, 311
Bme18I GGWCC 6 cut(s) 586, 640, 873, 1597, 1865, 2161
BmgT120I GGNCC 8 cut(s) 586, 640, 821, 873, 1099, 1597, 1865, 2161
BmrFI CCNGG 2 cut(s) 102, 311
BmrI ACTGGG 1 cut(s) 348
BmsI GCATC 6 cut(s) 262, 370, 490, 776, 1675, 2200
BmuI ACTGGG 1 cut(s) 348
BoxI GACNNNNGTC 1 cut(s) 1623
BpiI GAAGAC 2 cut(s) 1623, 2172
BpmI CTGGAG 1 cut(s) 2222
BpuEI CTTGAG 9 cut(s) 66, 281, 353, 434, 756, 1391, 1682, 1869, 2177
BpuMI CCSGG 2 cut(s) 102, 311
BsaHI GRCGYC 3 cut(s) 126, 138, 162
BsaJI CCNNGG 3 cut(s) 121, 189, 644
BsaWI WCCGGW 4 cut(s) 90, 517, 1003, 2199
Bsc4I CCNNNNNNNGG 2 cut(s) 1612, 2033
Bse118I RCCGGY 3 cut(s) 318, 517, 2199
Bse1I ACTGG 4 cut(s) 343, 1823, 2027, 2330
BseAI TCCGGA 2 cut(s) 90, 1003
BseDI CCNNGG 3 cut(s) 121, 189, 644
BseGI GGATG 8 cut(s) 150, 277, 505, 712, 1012, 1315, 1855, 2183
BseLI CCNNNNNNNGG 2 cut(s) 1612, 2033
BseNI ACTGG 4 cut(s) 343, 1823, 2027, 2330
BseRI GAGGAG 2 cut(s) 302, 774
BseSI GKGCMC 1 cut(s) 1789
BseXI GCAGC 7 cut(s) 932, 1029, 1050, 1345, 1856, 1981, 2294
BseYI CCCAGC 3 cut(s) 781, 1847, 2256
BsgI GTGCAG 3 cut(s) 939, 1932, 2354
Bsh1236I CGCG 3 cut(s) 59, 186, 1936
BshFI GGCC 6 cut(s) 105, 322, 393, 822, 1101, 1822
BshNI GGYRCC 3 cut(s) 117, 125, 193
BshTI ACCGGT 2 cut(s) 517, 2199
BsiHKAI GWGCWC 2 cut(s) 297, 1789
BsiSI CCGG 9 cut(s) 91, 102, 311, 319, 398, 518, 1004, 2200, 2376
BslI CCNNNNNNNGG 2 cut(s) 1612, 2033
BsmAI GTCTC 5 cut(s) 329, 455, 723, 1392, 1702
BsmBI CGTCTC 1 cut(s) 1392
BsnI GGCC 6 cut(s) 105, 322, 393, 822, 1101, 1822
Bsp1286I GDGCHC 3 cut(s) 297, 788, 1789
Bsp13I TCCGGA 2 cut(s) 90, 1003
Bsp1407I TGTACA 3 cut(s) 372, 1810, 1981
Bsp143I GATC 8 cut(s) 97, 300, 661, 808, 928, 1027, 1534, 2269
BspACI CCGC 6 cut(s) 154, 166, 169, 209, 589, 1411
BspANI GGCC 6 cut(s) 105, 322, 393, 822, 1101, 1822
BspEI TCCGGA 2 cut(s) 90, 1003
BspFNI CGCG 3 cut(s) 59, 186, 1936
BspHI TCATGA 2 cut(s) 1156, 1483
BspMAI CTGCAG 1 cut(s) 448
BspPI GGATC 1 cut(s) 92
BspT107I GGYRCC 3 cut(s) 117, 125, 193
BsrBI CCGCTC 1 cut(s) 156
BsrFI RCCGGY 3 cut(s) 318, 517, 2199
BsrGI TGTACA 3 cut(s) 372, 1810, 1981
BsrI ACTGG 4 cut(s) 343, 1823, 2027, 2330
BssAI RCCGGY 3 cut(s) 318, 517, 2199
BssECI CCNNGG 3 cut(s) 121, 189, 644
BssMI GATC 8 cut(s) 97, 300, 661, 808, 928, 1027, 1534, 2269
BssNI GRCGYC 3 cut(s) 126, 138, 162
BssT1I CCWWGG 1 cut(s) 644
Bst4CI ACNGT 6 cut(s) 198, 508, 862, 1024, 1112, 2225
Bst6I CTCTTC 1 cut(s) 846
BstACI GRCGYC 3 cut(s) 126, 138, 162
BstAPI GCANNNNNTGC 2 cut(s) 452, 1760
BstAUI TGTACA 3 cut(s) 372, 1810, 1981
BstDSI CCRYGG 1 cut(s) 121
BstEII GGTNACC 1 cut(s) 2195
BstF5I GGATG 8 cut(s) 150, 277, 505, 712, 1012, 1315, 1855, 2183
BstFNI CGCG 3 cut(s) 59, 186, 1936
BstH2I RGCGCY 2 cut(s) 129, 1744
BstHHI GCGC 5 cut(s) 128, 188, 277, 1743, 1936
BstKTI GATC 8 cut(s) 100, 303, 664, 811, 931, 1030, 1537, 2272
BstMAI GTCTC 5 cut(s) 329, 455, 723, 1392, 1702
BstMBI GATC 8 cut(s) 97, 300, 661, 808, 928, 1027, 1534, 2269
BstMWI GCNNNNNNNGC 5 cut(s) 386, 452, 572, 1133, 1760
BstNSI RCATGY 2 cut(s) 175, 1721
BstPAI GACNNNNGTC 1 cut(s) 1623
BstPI GGTNACC 1 cut(s) 2195
BstSCI CCNGG 2 cut(s) 100, 309
BstSFI CTRYAG 3 cut(s) 256, 444, 1108
BstSLI GKGCMC 1 cut(s) 1789
BstUI CGCG 3 cut(s) 59, 186, 1936
BstV1I GCAGC 7 cut(s) 932, 1029, 1050, 1345, 1856, 1981, 2294
BstV2I GAAGAC 2 cut(s) 1623, 2172
BstX2I RGATCY 1 cut(s) 97
BstYI RGATCY 1 cut(s) 97
BsuI GTATCC 1 cut(s) 985
BsuRI GGCC 6 cut(s) 105, 322, 393, 822, 1101, 1822
BtgI CCRYGG 1 cut(s) 121
BtgZI GCGATG 1 cut(s) 1187
BtsCI GGATG 8 cut(s) 150, 277, 505, 712, 1012, 1315, 1855, 2183
BtsIMutI CAGTG 4 cut(s) 119, 2034, 2055, 2337
CciI TCATGA 2 cut(s) 1156, 1483
CfoI GCGC 5 cut(s) 128, 188, 277, 1743, 1936
Cfr10I RCCGGY 3 cut(s) 318, 517, 2199
Cfr13I GGNCC 8 cut(s) 586, 640, 821, 873, 1099, 1597, 1865, 2161
CseI GACGC 1 cut(s) 1287
CspAI ACCGGT 2 cut(s) 517, 2199
CspCI CAANNNNNGTGG 8 cut(s) 492, 527, 594, 629, 967, 1002, 1477, 1512
DinI GGCGCC 1 cut(s) 127
DpnI GATC 8 cut(s) 99, 302, 663, 810, 930, 1029, 1536, 2271
DpnII GATC 8 cut(s) 97, 300, 661, 808, 928, 1027, 1534, 2269
EaeI YGGCCR 2 cut(s) 103, 391
Eam1104I CTCTTC 1 cut(s) 846
EarI CTCTTC 1 cut(s) 846
EciI GGCGGA 2 cut(s) 155, 1400
Eco130I CCWWGG 1 cut(s) 644
Eco24I GRGCYC 1 cut(s) 788
Eco32I GATATC 1 cut(s) 355
Eco47I GGWCC 6 cut(s) 586, 640, 873, 1597, 1865, 2161
Eco57I CTGAAG 1 cut(s) 870
Eco91I GGTNACC 1 cut(s) 2195
EcoO65I GGTNACC 1 cut(s) 2195
EcoRV GATATC 1 cut(s) 355
EcoT14I CCWWGG 1 cut(s) 644
EcoT38I GRGCYC 1 cut(s) 788
EgeI GGCGCC 1 cut(s) 127
EheI GGCGCC 1 cut(s) 127
ErhI CCWWGG 1 cut(s) 644
Esp3I CGTCTC 1 cut(s) 1392
FalI AAGNNNNNCTT 2 cut(s) 290, 322
FauNDI CATATG 1 cut(s) 1792
FbaI TGATCA 1 cut(s) 928
FblI GTMKAC 1 cut(s) 1478
Fnu4HI GCNGC 8 cut(s) 169, 921, 1043, 1064, 1359, 1845, 1995, 2308
FokI GGATG 8 cut(s) 137, 284, 512, 719, 1019, 1322, 1842, 2170
FriOI GRGCYC 1 cut(s) 788
Fsp4HI GCNGC 8 cut(s) 169, 921, 1043, 1064, 1359, 1845, 1995, 2308
FspAI RTGCGCAY 1 cut(s) 276
FspBI CTAG 4 cut(s) 645, 924, 971, 2168
FspI TGCGCA 1 cut(s) 276
GlaI GCGC 5 cut(s) 127, 187, 276, 1742, 1935
GluI GCNGC 8 cut(s) 169, 921, 1043, 1064, 1359, 1845, 1995, 2308
GsaI CCCAGC 3 cut(s) 785, 1851, 2260
GsuI CTGGAG 1 cut(s) 2222
HaeII RGCGCY 2 cut(s) 129, 1744
HaeIII GGCC 6 cut(s) 105, 322, 393, 822, 1101, 1822
HapII CCGG 9 cut(s) 91, 102, 311, 319, 398, 518, 1004, 2200, 2376
HgaI GACGC 1 cut(s) 1287
HhaI GCGC 5 cut(s) 128, 188, 277, 1743, 1936
Hin1I GRCGYC 3 cut(s) 126, 138, 162
Hin6I GCGC 5 cut(s) 126, 186, 275, 1741, 1934
HinP1I GCGC 5 cut(s) 126, 186, 275, 1741, 1934
HincII GTYRAC 1 cut(s) 2128
HindII GTYRAC 1 cut(s) 2128
HindIII AAGCTT 1 cut(s) 84
HinfI GANTC 6 cut(s) 71, 1430, 1448, 1943, 2233, 2365
HpaII CCGG 9 cut(s) 91, 102, 311, 319, 398, 518, 1004, 2200, 2376
HphI GGTGA 1 cut(s) 2189
Hpy166II GTNNAC 7 cut(s) 142, 373, 1190, 1479, 1597, 1787, 2128
Hpy8I GTNNAC 7 cut(s) 142, 373, 1190, 1479, 1597, 1787, 2128
Hpy99I CGWCG 2 cut(s) 140, 164
HpyAV CCTTC 9 cut(s) 139, 333, 391, 412, 468, 1265, 1707, 1792, 2026
HpyCH4III ACNGT 6 cut(s) 198, 508, 862, 1024, 1112, 2225
HpyCH4IV ACGT 3 cut(s) 138, 162, 1339
HpyF10VI GCNNNNNNNGC 5 cut(s) 386, 452, 572, 1133, 1760
HpySE526I ACGT 3 cut(s) 138, 162, 1339
Hsp92I GRCGYC 3 cut(s) 126, 138, 162
HspAI GCGC 5 cut(s) 126, 186, 275, 1741, 1934
KasI GGCGCC 1 cut(s) 125
Kpn2I TCCGGA 2 cut(s) 90, 1003
KpnI GGTACC 1 cut(s) 197
Ksp22I TGATCA 1 cut(s) 928
Kzo9I GATC 8 cut(s) 97, 300, 661, 808, 928, 1027, 1534, 2269
LmnI GCTCC 5 cut(s) 161, 180, 343, 400, 1006
Lsp1109I GCAGC 7 cut(s) 932, 1029, 1050, 1345, 1856, 1981, 2294
LweI GCATC 6 cut(s) 262, 370, 490, 776, 1675, 2200
MaeI CTAG 4 cut(s) 645, 924, 971, 2168
MaeII ACGT 3 cut(s) 138, 162, 1339
MaeIII GTNAC 2 cut(s) 2195, 2202
MalI GATC 8 cut(s) 99, 302, 663, 810, 930, 1029, 1536, 2271
MbiI CCGCTC 1 cut(s) 156
MboI GATC 8 cut(s) 97, 300, 661, 808, 928, 1027, 1534, 2269
MboII GAAGA 7 cut(s) 863, 1340, 1516, 1628, 2172, 2308, 2398
MfeI CAATTG 1 cut(s) 1128
MflI RGATCY 1 cut(s) 97
MhlI GDGCHC 3 cut(s) 297, 788, 1789
MlsI TGGCCA 1 cut(s) 393
MluNI TGGCCA 1 cut(s) 393
Mly113I GGCGCC 1 cut(s) 126
MlyI GAGTC 1 cut(s) 80
MmeI TCCRAC 4 cut(s) 183, 264, 564, 934
Mox20I TGGCCA 1 cut(s) 393
MroI TCCGGA 2 cut(s) 90, 1003
MscI TGGCCA 1 cut(s) 393
MseI TTAA 3 cut(s) 1143, 1323, 2147
MslI CAYNNNNRTG 4 cut(s) 1206, 1422, 1671, 1812
Msp20I TGGCCA 1 cut(s) 393
MspA1I CMGCKG 4 cut(s) 211, 566, 818, 1847
MspI CCGG 9 cut(s) 91, 102, 311, 319, 398, 518, 1004, 2200, 2376
MspR9I CCNGG 2 cut(s) 102, 311
MunI CAATTG 1 cut(s) 1128
MvnI CGCG 3 cut(s) 59, 186, 1936
MwoI GCNNNNNNNGC 5 cut(s) 386, 452, 572, 1133, 1760
NarI GGCGCC 1 cut(s) 126
NciI CCSGG 2 cut(s) 102, 311
NdeI CATATG 1 cut(s) 1792
NdeII GATC 8 cut(s) 97, 300, 661, 808, 928, 1027, 1534, 2269
NmeAIII GCCGAG 1 cut(s) 214
NmuCI GTSAC 1 cut(s) 2195
NsbI TGCGCA 1 cut(s) 276
NspI RCATGY 2 cut(s) 175, 1721
PaeI GCATGC 2 cut(s) 175, 1721
PagI TCATGA 2 cut(s) 1156, 1483
PcsI WCGNNNNNNNCGW 1 cut(s) 141
PfeI GAWTC 5 cut(s) 1430, 1448, 1943, 2233, 2365
PinAI ACCGGT 2 cut(s) 517, 2199
PkrI GCNGC 8 cut(s) 170, 922, 1044, 1065, 1360, 1846, 1996, 2309
PleI GAGTC 1 cut(s) 79
PluTI GGCGCC 1 cut(s) 129
PpsI GAGTC 1 cut(s) 79
PshAI GACNNNNGTC 1 cut(s) 1623
Psp1406I AACGTT 1 cut(s) 1339
PspEI GGTNACC 1 cut(s) 2195
PspFI CCCAGC 3 cut(s) 781, 1847, 2256
PspPI GGNCC 8 cut(s) 586, 640, 821, 873, 1099, 1597, 1865, 2161
PstI CTGCAG 1 cut(s) 448
PsuI RGATCY 1 cut(s) 97
PvuII CAGCTG 3 cut(s) 566, 818, 1847
RseI CAYNNNNRTG 4 cut(s) 1206, 1422, 1671, 1812
SaqAI TTAA 3 cut(s) 1143, 1323, 2147
SatI GCNGC 8 cut(s) 169, 921, 1043, 1064, 1359, 1845, 1995, 2308
Sau3AI GATC 8 cut(s) 97, 300, 661, 808, 928, 1027, 1534, 2269
Sau96I GGNCC 8 cut(s) 586, 640, 821, 873, 1099, 1597, 1865, 2161
SbfI CCTGCAGG 1 cut(s) 448
SchI GAGTC 1 cut(s) 80
ScrFI CCNGG 2 cut(s) 102, 311
SdaI CCTGCAGG 1 cut(s) 448
SduI GDGCHC 3 cut(s) 297, 788, 1789
SfaNI GCATC 6 cut(s) 262, 370, 490, 776, 1675, 2200
SfcI CTRYAG 3 cut(s) 256, 444, 1108
SfoI GGCGCC 1 cut(s) 127
SinI GGWCC 6 cut(s) 586, 640, 873, 1597, 1865, 2161
SmiMI CAYNNNNRTG 4 cut(s) 1206, 1422, 1671, 1812
SmlI CTYRAG 9 cut(s) 81, 296, 332, 413, 771, 1370, 1661, 1884, 2156
SmoI CTYRAG 9 cut(s) 81, 296, 332, 413, 771, 1370, 1661, 1884, 2156
SphI GCATGC 2 cut(s) 175, 1721
Sse8387I CCTGCAGG 1 cut(s) 448
SsiI CCGC 6 cut(s) 154, 166, 169, 209, 589, 1411
SspDI GGCGCC 1 cut(s) 125
SspI AATATT 2 cut(s) 609, 1087
SspMI CTAG 4 cut(s) 645, 924, 971, 2168
StyD4I CCNGG 2 cut(s) 100, 309
StyI CCWWGG 1 cut(s) 644
TaaI ACNGT 6 cut(s) 198, 508, 862, 1024, 1112, 2225
TaiI ACGT 3 cut(s) 141, 165, 1342
TaqI TCGA 4 cut(s) 351, 357, 549, 1394
TatI WGTACW 5 cut(s) 372, 1657, 1810, 1981, 2319
TauI GCSGC 1 cut(s) 171
TfiI GAWTC 5 cut(s) 1430, 1448, 1943, 2233, 2365
Tru1I TTAA 3 cut(s) 1143, 1323, 2147
Tru9I TTAA 3 cut(s) 1143, 1323, 2147
TscAI CASTG 4 cut(s) 119, 2034, 2062, 2337
TseFI GTSAC 1 cut(s) 2195
TseI GCWGC 7 cut(s) 920, 1042, 1063, 1358, 1844, 1994, 2307
Tsp45I GTSAC 1 cut(s) 2195
TspDTI ATGAA 9 cut(s) 1145, 1185, 1280, 1443, 1830, 2133, 2172, 2315, 2383
TspGWI ACGGA 1 cut(s) 849
TspRI CASTG 4 cut(s) 119, 2034, 2062, 2337
VneI GTGCAC 1 cut(s) 1785
VpaK11BI GGWCC 6 cut(s) 586, 640, 873, 1597, 1865, 2161
XapI RAATTY 2 cut(s) 1400, 1959
XceI RCATGY 2 cut(s) 175, 1721
XcmI CCANNNNNNNNNTGG 2 cut(s) 1303, 1830
XmaJI CCTAGG 1 cut(s) 644
XmiI GTMKAC 1 cut(s) 1478
XspI CTAG 4 cut(s) 645, 924, 971, 2168
ZraI GACGTC 2 cut(s) 139, 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.