Prupe.1G115700_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0014038
Physical Location & Seq
Reverse (-)
9134232 .. 9140734
6503 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G115700.2

Sequence Viewer

Length: 2442 bp
ATGGCTGCCAAATCAAATCCAATATCAACGCCAATGATACATGCCTTCGTTTTCGCACTGAGCCTGTTTGTGTTTCAATCCGAGTCGGCGCCTCAGGCTTTCCGGAGAGATCCAGGTCACCCTCAGTGGCACCACAGCGCCTTCCACGACGTCCGAGATGGCGTTCGATCCGATGTTCGCCGCATGCTCCATTCTCGCGCTGAGGTTCCGTTCCAGGTTCCGCTCGAAGTGAATGTGGTGCTTATTGGTTTCAATGCTGATGGAGGCTATAGGTACTCGGTCGATGCGCACAAATTGGAAGAGTTTCTGAAAATCAGCTTCCCATTGCATAGGCCTTCCTGCCTGGAGACAGGACAGCCTCTCGATATCGAGCATCAAATTGTCTATAATGCCTTTCCCGCCGGGCAGCCAGAACTGTTAGCTCTTGAGAAGGCACTGAAAGAGGTTATGGTTCCTGCAGGAAATGCAAGAGAGGCTGATTTTGGAAGGGAAGTACCTCTGTTTGAAGTGGATGCAACTATAGTGGAGCCTGTATTTCAGAGGTTATATTCCTACATATTTGACACAGAGAGTGCTGCTTATTCCGCTGCTGATGATATGGATCGGCAAGTTCCAAGTGCAATATTTATAGTCAATTTTGATAAGGTCAGGATGGATCCGAGGAATAAGGACATTGATCTTGACAGCTTAATGTATGGTAAACTTACACAGCTCACTGAGGAAGATATGAAAAAACAAGAGGGAGACTACATTTATCGCTATCGATACAATGGAGGAGGTGCATCTCAAGTTTGGCTTGGCTCTGGCAGATTTGTTGTGATTGATCTCTCAGCGGGCCCATGCACATATGGAAAGATTGAAACTGAAGAGGGAACTGTCAGTTCCAGGACATTGCCACGACTTAAGAATGTGGTGTTTCCAAGAGGTTTCGGTGCAGCTAGTGATCACCCTACACATGATGTATTTGTTGGACAACTTGCCTCTTTAGTATCCACCACAGTCGAGCATGTTATAGCTCCAGATGTTAGATTTGAAACTGTTGACCTGACAACAAGGCTGCTTTTACCAATAATTGTCCTCCAAAATCATAATCGCTACAACATTATAGATAAAGGCCACAACTACAGTATAAATATTGAAGCAATTGAGGCAGAGGTGAAGAAAATGGTTCATGCTGGGCAAGAAGTTGTGATTGTTGGGGGTTCACATTCGTTACATCGCCATGAGAAGTTGTCGATTGCTGTTTCAAAAGCTATGAGAAGCCATTCCCTGCAAGAAACTAAGAACGATGGGCGCTTCCATGTTCATACCAAGACATATCTGGATGGAGCTATTCTTAAAGAAGAGATGGAACGTTCTGCTGATGTGCTTGCTGCTGGTTTGCTTGAGGTGGCTGACCCAAATCTTTCAAGTAAATTTTTCCTCCGCCAGCATTGGGCAGATGACTCCGAGGGTTCAAGTGATTCTATTCTAAAGCATAAACCTCTTTGGTCCACTTATGAATCAAAGCACGGAAAGAAAAAAAAAAGACTAGAAAGGAAACAAGGAGAGTTTTACCGAACTTATGGAACAAGAGTGATTCCTGTTTTTGTGCTATCATTGGCTGATGTGGATCCACACCTTATGATGGAAGATGAAAGTCTTGTATGGACAAGCAAAGATGTAGTGATTGTACTTGAGCATCAAAATGAAAAGATACCTCTTAGTTATGTTTCAGAAACTCAGAGGAGGCATGCCTTTCCATCTCAGGCACAGCGCCATATATTGGCAGGACTTGCTTCCGCTGTTGGCGGGTTGAGTGCACCATATGAAAAGGCTTCTCATGTACATGAAAGGTCAGTTGTGAATTGGCTTTGGGCAGCAGGTTGTCATCCATTTGGACCATTCTCTAATACTTCTCAAGTCAGTCAAATGCTTCAGGATGTTGCATTGAGGAACACAATATATGCACGTGTAGATTCTGCTCTCCACAGAATTCGTGAGACGTCAGAGGCTGTACAAACTTTTGCAGCACAGTATCTAAAAACTCCGCTTGGTGAACCAGTGAAGGGAAAGAGGAACAAAACAACCACTGAACTATGGGTGGAGAAGTTTTACAAAAAGACAACTAACTTGCCTGAACCGTTCCCACACGAATTAGTTGATAGATTGGAGAACTACTTGGATACCCTTGAGGAACAGCTTGTAGAGTTGTCTTCATCGTTATATGGCCATCGCTTACAAGATGCACATTTGAACAGTTCGGAAATTCTCCAGAGTTCCATATTTACCCAGCAGTACGTAGACCATGTTCTGGCCAATGAGAGGGACAAGATGAAATGCTGCGACATTGAGTACAAATATCCTGTGCAGGCATCTCAAACTTATATCTATGGGGGGATTCTTATTGCCGGATTCGTTGTATATTTTGTTGTCATTTTCTTTTCATCTCCCGTGCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

814

Amino Acids

91.9

Weight (kDa)

6.19

Isoelectric Point (pI)

43.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G16180
fragaria_vesca FvH4_4g19930 FvH4_4g19930
malus_domestica MD16G1152500.v1.1
prunus_persica Prupe.1G115700_v2.0.a1 Prupe.1G115700_v2.0.a1
pyrus_communis pycom16g12970
rosa_chinensis RchiOBHm_Chr4g0425571
rosa_laevigata RLG00000007353
rosa_multiflora Rmu_sc0001900.1_g000001 Rmu_sc0003958.1_g000018
rosa_roxburghii Rroxscaffold_5G00367540
rosa_rugosa Rorug04G0204200
rosa_samantha Rh4AG261100 Rh4BG267000 Rh4CG278200
rosa_wichuraiana Rw4G022610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 153, 1988
Acc16I TGCGCA 1 cut(s) 288
Acc36I ACCTGC 1 cut(s) 1853
AccB1I GGYRCC 2 cut(s) 88, 129
AccB7I CCANNNNNTGG 2 cut(s) 1765, 2293
AccBSI CCGCTC 1 cut(s) 223
AccI GTMKAC 1 cut(s) 2283
AccII CGCG 1 cut(s) 198
AccIII TCCGGA 1 cut(s) 102
AciI CCGC 9 cut(s) 181, 221, 399, 585, 833, 1426, 1782, 1791, 2030
AclI AACGTT 1 cut(s) 1354
AclWI GGATC 7 cut(s) 104, 162, 609, 650, 663, 1607, 1620
AcoI YGGCCR 2 cut(s) 2209, 2295
AcsI RAATTY 3 cut(s) 1415, 1974, 2247
AcuI CTGAAG 2 cut(s) 885, 1901
AcvI CACGTG 1 cut(s) 1952
AcyI GRCGYC 3 cut(s) 89, 150, 1985
AfaI GTAC 7 cut(s) 275, 495, 1674, 1827, 1998, 2279, 2336
AfiI CCNNNNNNNGG 6 cut(s) 1435, 1627, 1765, 2048, 2293, 2304
AflII CTTAAG 1 cut(s) 902
AflIII ACRYGT 1 cut(s) 1951
AjnI CCWGG 4 cut(s) 112, 213, 342, 884
AluBI AGCT 9 cut(s) 318, 422, 687, 712, 938, 1016, 1253, 1331, 2182
AluI AGCT 9 cut(s) 318, 422, 687, 712, 938, 1016, 1253, 1331, 2182
Alw21I GWGCWC 1 cut(s) 1804
Alw26I GTCTC 3 cut(s) 341, 738, 1976
Alw44I GTGCAC 1 cut(s) 1800
AlwI GGATC 7 cut(s) 104, 162, 609, 650, 663, 1607, 1620
AlwNI CAGNNNCTG 1 cut(s) 1994
Aor13HI TCCGGA 1 cut(s) 102
AoxI GGCC 5 cut(s) 332, 835, 1114, 2209, 2295
ApaI GGGCCC 1 cut(s) 839
ApaLI GTGCAC 1 cut(s) 1800
ApoI RAATTY 3 cut(s) 1415, 1974, 2247
Asp700I GAANNNNTTC 2 cut(s) 303, 1264
AspLEI GCGC 7 cut(s) 91, 140, 200, 289, 1296, 1758, 2439
AspS9I GGNCC 4 cut(s) 835, 836, 1491, 1880
AsuC2I CCSGG 1 cut(s) 403
AsuHPI GGTGA 4 cut(s) 110, 938, 1168, 2048
AvaII GGWCC 2 cut(s) 1491, 1880
AxyI CCTNAGG 1 cut(s) 93
BaeGI GKGCMC 2 cut(s) 839, 1804
BalI TGGCCA 2 cut(s) 2211, 2297
BamHI GGATCC 2 cut(s) 655, 1612
BanI GGYRCC 2 cut(s) 88, 129
BanII GRGCYC 1 cut(s) 839
BbrPI CACGTG 1 cut(s) 1952
BbsI GAAGAC 1 cut(s) 2187
Bbv12I GWGCWC 1 cut(s) 1804
BbvCI CCTCAGC 1 cut(s) 201
BbvI GCAGC 9 cut(s) 418, 562, 574, 947, 1044, 1360, 1871, 2021, 2309
BccI CCATC 9 cut(s) 152, 254, 646, 1283, 1319, 1342, 1621, 1750, 2220
BciT130I CCWGG 4 cut(s) 114, 215, 344, 886
BciVI GTATCC 2 cut(s) 1000, 2158
BclI TGATCA 1 cut(s) 943
BcnI CCSGG 1 cut(s) 403
BcoDI GTCTC 3 cut(s) 341, 738, 1976
BfaI CTAG 2 cut(s) 939, 1532
BfmI CTRYAG 4 cut(s) 268, 456, 519, 1123
BfoI RGCGCY 4 cut(s) 92, 141, 1297, 1759
BfrI CTTAAG 1 cut(s) 902
BfuAI ACCTGC 1 cut(s) 1853
BfuI GTATCC 2 cut(s) 1000, 2158
Bme1390I CCNGG 5 cut(s) 114, 215, 344, 403, 886
Bme18I GGWCC 2 cut(s) 1491, 1880
BmgT120I GGNCC 4 cut(s) 835, 836, 1491, 1880
BmiI GGNNCC 9 cut(s) 90, 131, 207, 219, 453, 528, 657, 837, 1614
BmrFI CCNGG 5 cut(s) 114, 215, 344, 403, 886
BmsI GCATC 7 cut(s) 274, 382, 502, 791, 1690, 2215, 2363
BpiI GAAGAC 1 cut(s) 2187
BpmI CTGGAG 3 cut(s) 365, 1002, 2237
Bpu10I CCTNAGC 1 cut(s) 201
BpuEI CTTGAG 6 cut(s) 446, 771, 1406, 1697, 1884, 2192
BpuMI CCSGG 1 cut(s) 403
Bsa29I ATCGAT 1 cut(s) 763
BsaAI YACGTR 2 cut(s) 1952, 2281
BsaBI GATNNNNATC 2 cut(s) 600, 1611
BsaHI GRCGYC 3 cut(s) 89, 150, 1985
BsaJI CCNNGG 2 cut(s) 659, 1449
BsaWI WCCGGW 1 cut(s) 102
Bsc4I CCNNNNNNNGG 6 cut(s) 1435, 1627, 1765, 2048, 2293, 2304
Bse1I ACTGG 1 cut(s) 2042
Bse21I CCTNAGG 1 cut(s) 93
Bse3DI GCAATG 2 cut(s) 323, 890
Bse8I GATNNNNATC 2 cut(s) 600, 1611
BseAI TCCGGA 1 cut(s) 102
BseBI CCWGG 4 cut(s) 114, 215, 344, 886
BseCI ATCGAT 1 cut(s) 763
BseDI CCNNGG 2 cut(s) 659, 1449
BseGI GGATG 5 cut(s) 517, 657, 1330, 1870, 1927
BseJI GATNNNNATC 2 cut(s) 600, 1611
BseLI CCNNNNNNNGG 6 cut(s) 1435, 1627, 1765, 2048, 2293, 2304
BseMI GCAATG 2 cut(s) 323, 890
BseMII CTCAG 8 cut(s) 50, 107, 137, 192, 708, 843, 1736, 1760
BseNI ACTGG 1 cut(s) 2042
BseRI GAGGAG 2 cut(s) 789, 1741
BseSI GKGCMC 2 cut(s) 839, 1804
BseXI GCAGC 9 cut(s) 418, 562, 574, 947, 1044, 1360, 1871, 2021, 2309
BseYI CCCAGC 2 cut(s) 1175, 2271
BsgI GTGCAG 2 cut(s) 954, 2369
Bsh1236I CGCG 1 cut(s) 198
Bsh1285I CGRYCG 1 cut(s) 282
BshFI GGCC 5 cut(s) 334, 837, 1116, 2211, 2297
BshNI GGYRCC 2 cut(s) 88, 129
BshVI ATCGAT 1 cut(s) 763
BsiEI CGRYCG 1 cut(s) 282
BsiHKAI GWGCWC 1 cut(s) 1804
BsiSI CCGG 3 cut(s) 103, 402, 2391
BslFI GGGAC 1 cut(s) 2321
BslI CCNNNNNNNGG 6 cut(s) 1435, 1627, 1765, 2048, 2293, 2304
BsmAI GTCTC 3 cut(s) 341, 738, 1976
BsmBI CGTCTC 1 cut(s) 1976
BsmFI GGGAC 1 cut(s) 2321
BsnI GGCC 5 cut(s) 334, 837, 1116, 2211, 2297
Bsp120I GGGCCC 1 cut(s) 835
Bsp1286I GDGCHC 2 cut(s) 839, 1804
Bsp13I TCCGGA 1 cut(s) 102
Bsp1407I TGTACA 2 cut(s) 1825, 1996
Bsp143I GATC 8 cut(s) 109, 167, 601, 655, 676, 823, 943, 1612
BspACI CCGC 9 cut(s) 181, 221, 399, 585, 833, 1426, 1782, 1791, 2030
BspANI GGCC 5 cut(s) 334, 837, 1116, 2211, 2297
BspCNI CTCAG 8 cut(s) 51, 106, 136, 193, 709, 842, 1735, 1759
BspDI ATCGAT 1 cut(s) 763
BspEI TCCGGA 1 cut(s) 102
BspFNI CGCG 1 cut(s) 198
BspLI GGNNCC 9 cut(s) 90, 131, 207, 219, 453, 528, 657, 837, 1614
BspMAI CTGCAG 1 cut(s) 460
BspMI ACCTGC 1 cut(s) 1853
BspPI GGATC 7 cut(s) 104, 162, 609, 650, 663, 1607, 1620
BspT107I GGYRCC 2 cut(s) 88, 129
BspTI CTTAAG 1 cut(s) 902
BsrBI CCGCTC 1 cut(s) 223
BsrDI GCAATG 2 cut(s) 323, 890
BsrGI TGTACA 2 cut(s) 1825, 1996
BsrI ACTGG 1 cut(s) 2042
BssECI CCNNGG 2 cut(s) 659, 1449
BssMI GATC 8 cut(s) 109, 167, 601, 655, 676, 823, 943, 1612
BssNI GRCGYC 3 cut(s) 89, 150, 1985
Bst2UI CCWGG 4 cut(s) 114, 215, 344, 886
Bst4CI ACNGT 8 cut(s) 417, 877, 1000, 1039, 1127, 2016, 2124, 2240
Bst6I CTCTTC 3 cut(s) 294, 861, 1338
BstACI GRCGYC 3 cut(s) 89, 150, 1985
BstAFI CTTAAG 1 cut(s) 902
BstAPI GCANNNNNTGC 2 cut(s) 464, 1775
BstAUI TGTACA 2 cut(s) 1825, 1996
BstBAI YACGTR 2 cut(s) 1952, 2281
BstC8I GCNNGC 6 cut(s) 185, 835, 1371, 1430, 1734, 2352
BstEII GGTNACC 1 cut(s) 116
BstF5I GGATG 5 cut(s) 517, 657, 1330, 1870, 1927
BstFNI CGCG 1 cut(s) 198
BstH2I RGCGCY 4 cut(s) 92, 141, 1297, 1759
BstHHI GCGC 7 cut(s) 91, 140, 200, 289, 1296, 1758, 2439
BstKTI GATC 8 cut(s) 112, 170, 604, 658, 679, 826, 946, 1615
BstMAI GTCTC 3 cut(s) 341, 738, 1976
BstMBI GATC 8 cut(s) 109, 167, 601, 655, 676, 823, 943, 1612
BstMCI CGRYCG 1 cut(s) 282
BstMWI GCNNNNNNNGC 7 cut(s) 95, 398, 464, 473, 584, 1148, 1775
BstNI CCWGG 4 cut(s) 114, 215, 344, 886
BstNSI RCATGY 4 cut(s) 44, 187, 1010, 1736
BstPI GGTNACC 1 cut(s) 116
BstSCI CCNGG 5 cut(s) 112, 213, 342, 401, 884
BstSFI CTRYAG 4 cut(s) 268, 456, 519, 1123
BstSLI GKGCMC 2 cut(s) 839, 1804
BstSNI TACGTA 1 cut(s) 2281
BstUI CGCG 1 cut(s) 198
BstV1I GCAGC 9 cut(s) 418, 562, 574, 947, 1044, 1360, 1871, 2021, 2309
BstV2I GAAGAC 1 cut(s) 2187
BstX2I RGATCY 3 cut(s) 109, 655, 1612
BstYI RGATCY 3 cut(s) 109, 655, 1612
Bsu15I ATCGAT 1 cut(s) 763
Bsu36I CCTNAGG 1 cut(s) 93
BsuI GTATCC 2 cut(s) 1000, 2158
BsuRI GGCC 5 cut(s) 334, 837, 1116, 2211, 2297
BsuTUI ATCGAT 1 cut(s) 763
BtgZI GCGATG 2 cut(s) 1202, 2198
BtsCI GGATG 5 cut(s) 517, 657, 1330, 1870, 1927
BtsIMutI CAGTG 6 cut(s) 56, 131, 434, 714, 2049, 2070
BveI ACCTGC 1 cut(s) 1853
Cac8I GCNNGC 6 cut(s) 185, 835, 1371, 1430, 1734, 2352
CaiI CAGNNNCTG 1 cut(s) 1994
CfoI GCGC 7 cut(s) 91, 140, 200, 289, 1296, 1758, 2439
Cfr13I GGNCC 4 cut(s) 835, 836, 1491, 1880
ClaI ATCGAT 1 cut(s) 763
Csp6I GTAC 7 cut(s) 274, 494, 1673, 1826, 1997, 2278, 2335
CspCI CAANNNNNGTGG 2 cut(s) 504, 539
CviQI GTAC 7 cut(s) 274, 494, 1673, 1826, 1997, 2278, 2335
DinI GGCGCC 1 cut(s) 90
DpnI GATC 8 cut(s) 111, 169, 603, 657, 678, 825, 945, 1614
DpnII GATC 8 cut(s) 109, 167, 601, 655, 676, 823, 943, 1612
EaeI YGGCCR 2 cut(s) 2209, 2295
Eam1104I CTCTTC 3 cut(s) 294, 861, 1338
EarI CTCTTC 3 cut(s) 294, 861, 1338
EciI GGCGGA 1 cut(s) 1415
Eco105I TACGTA 1 cut(s) 2281
Eco147I AGGCCT 1 cut(s) 334
Eco24I GRGCYC 1 cut(s) 839
Eco32I GATATC 1 cut(s) 367
Eco47I GGWCC 2 cut(s) 1491, 1880
Eco57I CTGAAG 2 cut(s) 885, 1901
Eco72I CACGTG 1 cut(s) 1952
Eco81I CCTNAGG 1 cut(s) 93
Eco91I GGTNACC 1 cut(s) 116
EcoO65I GGTNACC 1 cut(s) 116
EcoRI GAATTC 1 cut(s) 1974
EcoRII CCWGG 4 cut(s) 112, 213, 342, 884
EcoRV GATATC 1 cut(s) 367
EcoT38I GRGCYC 1 cut(s) 839
EgeI GGCGCC 1 cut(s) 90
EheI GGCGCC 1 cut(s) 90
Esp3I CGTCTC 1 cut(s) 1976
FalI AAGNNNNNCTT 2 cut(s) 780, 812
FaqI GGGAC 1 cut(s) 2321
FauI CCCGC 3 cut(s) 406, 826, 1784
FauNDI CATATG 2 cut(s) 847, 1807
FbaI TGATCA 1 cut(s) 943
FblI GTMKAC 1 cut(s) 2283
FokI GGATG 5 cut(s) 524, 664, 1337, 1857, 1934
FriOI GRGCYC 1 cut(s) 839
FspAI RTGCGCAY 1 cut(s) 288
FspBI CTAG 2 cut(s) 939, 1532
FspI TGCGCA 1 cut(s) 288
GlaI GCGC 7 cut(s) 90, 139, 199, 288, 1295, 1757, 2438
GsaI CCCAGC 2 cut(s) 1179, 2275
GsuI CTGGAG 3 cut(s) 365, 1002, 2237
HaeII RGCGCY 4 cut(s) 92, 141, 1297, 1759
HaeIII GGCC 5 cut(s) 334, 837, 1116, 2211, 2297
HapII CCGG 3 cut(s) 103, 402, 2391
HhaI GCGC 7 cut(s) 91, 140, 200, 289, 1296, 1758, 2439
Hin1I GRCGYC 3 cut(s) 89, 150, 1985
Hin6I GCGC 7 cut(s) 89, 138, 198, 287, 1294, 1756, 2437
HinP1I GCGC 7 cut(s) 89, 138, 198, 287, 1294, 1756, 2437
HincII GTYRAC 1 cut(s) 1042
HindII GTYRAC 1 cut(s) 1042
HinfI GANTC 8 cut(s) 83, 1445, 1463, 1502, 1579, 1958, 2380, 2394
HpaII CCGG 3 cut(s) 103, 402, 2391
HphI GGTGA 4 cut(s) 110, 938, 1168, 2048
Hpy166II GTNNAC 7 cut(s) 701, 1042, 1205, 1494, 1802, 2039, 2284
Hpy8I GTNNAC 7 cut(s) 701, 1042, 1205, 1494, 1802, 2039, 2284
Hpy99I CGWCG 1 cut(s) 152
HpyAV CCTTC 6 cut(s) 55, 151, 345, 424, 480, 2041
HpyCH4III ACNGT 8 cut(s) 417, 877, 1000, 1039, 1127, 2016, 2124, 2240
HpyCH4IV ACGT 5 cut(s) 150, 1354, 1951, 1985, 2280
HpyF10VI GCNNNNNNNGC 7 cut(s) 95, 398, 464, 473, 584, 1148, 1775
HpySE526I ACGT 5 cut(s) 150, 1354, 1951, 1985, 2280
Hsp92I GRCGYC 3 cut(s) 89, 150, 1985
HspAI GCGC 7 cut(s) 89, 138, 198, 287, 1294, 1756, 2437
KasI GGCGCC 1 cut(s) 88
Kpn2I TCCGGA 1 cut(s) 102
Ksp22I TGATCA 1 cut(s) 943
Kzo9I GATC 8 cut(s) 109, 167, 601, 655, 676, 823, 943, 1612
LmnI GCTCC 4 cut(s) 192, 526, 1021, 1328
Lsp1109I GCAGC 9 cut(s) 418, 562, 574, 947, 1044, 1360, 1871, 2021, 2309
LweI GCATC 7 cut(s) 274, 382, 502, 791, 1690, 2215, 2363
MaeI CTAG 2 cut(s) 939, 1532
MaeII ACGT 5 cut(s) 150, 1354, 1951, 1985, 2280
MaeIII GTNAC 2 cut(s) 116, 1212
MalI GATC 8 cut(s) 111, 169, 603, 657, 678, 825, 945, 1614
MbiI CCGCTC 1 cut(s) 223
MboI GATC 8 cut(s) 109, 167, 601, 655, 676, 823, 943, 1612
MboII GAAGA 7 cut(s) 311, 734, 878, 1171, 1355, 1643, 2187
MfeI CAATTG 1 cut(s) 1143
MflI RGATCY 3 cut(s) 109, 655, 1612
MhlI GDGCHC 2 cut(s) 839, 1804
MlsI TGGCCA 2 cut(s) 2211, 2297
MluNI TGGCCA 2 cut(s) 2211, 2297
Mly113I GGCGCC 1 cut(s) 89
MlyI GAGTC 2 cut(s) 92, 1439
MmeI TCCRAC 1 cut(s) 949
Mox20I TGGCCA 2 cut(s) 2211, 2297
MroI TCCGGA 1 cut(s) 102
MroXI GAANNNNTTC 2 cut(s) 303, 1264
MscI TGGCCA 2 cut(s) 2211, 2297
MseI TTAA 3 cut(s) 689, 903, 1338
MslI CAYNNNNRTG 3 cut(s) 1221, 1686, 1827
Msp20I TGGCCA 2 cut(s) 2211, 2297
MspA1I CMGCKG 3 cut(s) 587, 833, 1784
MspCI CTTAAG 1 cut(s) 902
MspI CCGG 3 cut(s) 103, 402, 2391
MspR9I CCNGG 5 cut(s) 114, 215, 344, 403, 886
MunI CAATTG 1 cut(s) 1143
MvaI CCWGG 4 cut(s) 114, 215, 344, 886
MvnI CGCG 1 cut(s) 198
MwoI GCNNNNNNNGC 7 cut(s) 95, 398, 464, 473, 584, 1148, 1775
NarI GGCGCC 1 cut(s) 89
NciI CCSGG 1 cut(s) 403
NdeI CATATG 2 cut(s) 847, 1807
NdeII GATC 8 cut(s) 109, 167, 601, 655, 676, 823, 943, 1612
NlaIV GGNNCC 9 cut(s) 90, 131, 207, 219, 453, 528, 657, 837, 1614
NmuCI GTSAC 1 cut(s) 116
NsbI TGCGCA 1 cut(s) 288
NspI RCATGY 4 cut(s) 44, 187, 1010, 1736
PaeI GCATGC 2 cut(s) 187, 1736
PceI AGGCCT 1 cut(s) 334
PdmI GAANNNNTTC 2 cut(s) 303, 1264
PfeI GAWTC 6 cut(s) 1463, 1502, 1579, 1958, 2380, 2394
PflMI CCANNNNNTGG 2 cut(s) 1765, 2293
PfoI TCCNGGA 1 cut(s) 884
PleI GAGTC 2 cut(s) 91, 1439
PluTI GGCGCC 1 cut(s) 92
PmaCI CACGTG 1 cut(s) 1952
PmlI CACGTG 1 cut(s) 1952
PpsI GAGTC 2 cut(s) 91, 1439
Ppu21I YACGTR 2 cut(s) 1952, 2281
Psp1406I AACGTT 1 cut(s) 1354
Psp6I CCWGG 4 cut(s) 112, 213, 342, 884
PspCI CACGTG 1 cut(s) 1952
PspEI GGTNACC 1 cut(s) 116
PspFI CCCAGC 2 cut(s) 1175, 2271
PspGI CCWGG 4 cut(s) 112, 213, 342, 884
PspN4I GGNNCC 9 cut(s) 90, 131, 207, 219, 453, 528, 657, 837, 1614
PspOMI GGGCCC 1 cut(s) 835
PspPI GGNCC 4 cut(s) 835, 836, 1491, 1880
PsrI GAACNNNNNNTAC 2 cut(s) 2274, 2306
PstI CTGCAG 1 cut(s) 460
PstNI CAGNNNCTG 1 cut(s) 1994
PsuI RGATCY 3 cut(s) 109, 655, 1612
RsaI GTAC 7 cut(s) 275, 495, 1674, 1827, 1998, 2279, 2336
RsaNI GTAC 7 cut(s) 274, 494, 1673, 1826, 1997, 2278, 2335
RseI CAYNNNNRTG 3 cut(s) 1221, 1686, 1827
SaqAI TTAA 3 cut(s) 689, 903, 1338
Sau3AI GATC 8 cut(s) 109, 167, 601, 655, 676, 823, 943, 1612
Sau96I GGNCC 4 cut(s) 835, 836, 1491, 1880
SbfI CCTGCAGG 1 cut(s) 460
SchI GAGTC 2 cut(s) 92, 1439
ScrFI CCNGG 5 cut(s) 114, 215, 344, 403, 886
SdaI CCTGCAGG 1 cut(s) 460
SduI GDGCHC 2 cut(s) 839, 1804
SfaNI GCATC 7 cut(s) 274, 382, 502, 791, 1690, 2215, 2363
SfcI CTRYAG 4 cut(s) 268, 456, 519, 1123
SfoI GGCGCC 1 cut(s) 90
SinI GGWCC 2 cut(s) 1491, 1880
SmiMI CAYNNNNRTG 3 cut(s) 1221, 1686, 1827
SmlI CTYRAG 7 cut(s) 425, 786, 902, 1385, 1676, 1899, 2171
SmoI CTYRAG 7 cut(s) 425, 786, 902, 1385, 1676, 1899, 2171
SnaBI TACGTA 1 cut(s) 2281
SphI GCATGC 2 cut(s) 187, 1736
Sse8387I CCTGCAGG 1 cut(s) 460
SseBI AGGCCT 1 cut(s) 334
SsiI CCGC 9 cut(s) 181, 221, 399, 585, 833, 1426, 1782, 1791, 2030
SspDI GGCGCC 1 cut(s) 88
SspI AATATT 2 cut(s) 624, 1135
SspMI CTAG 2 cut(s) 939, 1532
StuI AGGCCT 1 cut(s) 334
StyD4I CCNGG 5 cut(s) 112, 213, 342, 401, 884
TaaI ACNGT 8 cut(s) 417, 877, 1000, 1039, 1127, 2016, 2124, 2240
TaiI ACGT 5 cut(s) 153, 1357, 1954, 1988, 2283
TaqI TCGA 8 cut(s) 166, 225, 282, 363, 369, 763, 1002, 1235
TaqII GACCGA 1 cut(s) 268
TatI WGTACW 4 cut(s) 1672, 1825, 1996, 2334
TauI GCSGC 1 cut(s) 183
TfiI GAWTC 6 cut(s) 1463, 1502, 1579, 1958, 2380, 2394
Tru1I TTAA 3 cut(s) 689, 903, 1338
Tru9I TTAA 3 cut(s) 689, 903, 1338
TscAI CASTG 6 cut(s) 63, 131, 441, 721, 2049, 2077
TseFI GTSAC 1 cut(s) 116
Tsp45I GTSAC 1 cut(s) 116
TspGWI ACGGA 2 cut(s) 198, 1527
TspRI CASTG 6 cut(s) 63, 131, 441, 721, 2049, 2077
Van91I CCANNNNNTGG 2 cut(s) 1765, 2293
Vha464I CTTAAG 1 cut(s) 902
VneI GTGCAC 1 cut(s) 1800
VpaK11BI GGWCC 2 cut(s) 1491, 1880
XapI RAATTY 3 cut(s) 1415, 1974, 2247
XceI RCATGY 4 cut(s) 44, 187, 1010, 1736
XcmI CCANNNNNNNNNTGG 1 cut(s) 1318
XmiI GTMKAC 1 cut(s) 2283
XmnI GAANNNNTTC 2 cut(s) 303, 1264
XspI CTAG 2 cut(s) 939, 1532
ZraI GACGTC 2 cut(s) 151, 1986
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.