RchiOBHm_Chr4g0425571

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0014038
Physical Location & Seq
Forward (+)
51187349 .. 51193490
6142 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39472

Sequence Viewer

Length: 2436 bp
ATGGCTGCAAATTCACTACCAATACTATATGCTCTTGTTCTCGCACTGAGCCTGTTCGCGTTTCAATCCGAGTCGGCGCCTCAAGCTTTCCGTAGAGATCCAGGTCACCCTCAGTGGCACCACGGCGCCTTCCACGACGTCCGTGACACCATTCGCTCCGATGTCCGCCGCATGCTCCATTCTCGCGCCGAGGTGCCGTTCCAGGTTCCACTGGAAGTGAATGTGGTGCTTGTTGGTTTCAATGGTGATGGAGGCTATAGGTACTCGGTGGATGCGCACAAATTGGAGGAGCTGCTCAAGATCAGCTTCCCGACACACCGGCCGGCGTGTCTTGAGACCGGGGAGGCTCTCGATATCGAGCATCAAATTGTCTACAATGCCTTCCCTGCTGGGCAGCCGGAGCTTATAGCTCTCGAGAAGGCATTGAAGGAGGCGATGGTTCCTGCAGGAAATGCGAGAGAGTCTGAATTTGGAAGGGAAGTACCTCTTTTTGAGGTGGATGCAACTGTAGTGGAGCCGGTATTTCAGAGGTTGTATTCCTATATATTTGACACAGACAATTCGGCTGTTTCTGCTATGGAGTTGGATCGCCAAGTGCCAAGTGCAATATTTGTGGTCAATTTTGATAAGGTCAGAATGGATCCTAGGAATAAGGAAATTGATCTTGACAACTTGATGTATGGAAAAATTACACAACTAACTGATGATGATATGCAAAAACAAGAGGGAGACTATATTTATCGCTATCGGTACAATGGAGGAGGTGCCTCTCAAGTTTGGCTGGGCTATGGCAGATATGTAGTGATCGATCTCTCGGCCGGCCCGTGTACTTATGGAAAGATTGAAACTGAAGAGGGAACTGTCAGTTCTCGGACCCTGCCACGACTACGGAATATTATGTTTCCAAGAGGAATGGGTGCAGACCGTGCAGCTAGTGAGCACTCTACACATGATGTATTTGTTGGACAACTTGCCTCTCTAGTATCCACCACGATTGAGCATGTTATAGCTCCAGATGTTAGATTTGAAACTGTTGATCTGACAACAAGGCTGCTTTTACCAATAATTGTGCTGCAAAATCATAATCGGTACAATATTATAGAGAAGGGCCACAACTACAGTATAAATATTGAAGCAATTGAGGCACAGGTGAAGAAAATGGTTCATGATGGGCAAGAAGTTGTGATCGTTGGGGGTTCACATTCATTACATCGCCATGAGAAGTTGGCAATTGCCGTTTCAAAAGCTATGCGAGGCCATTCCCTTCAAGAAACTAGGAATGATGGACGCTTTCATGTTCATACCAAGACATATCTGGATGGTGCTCTTCTTAAAGAAGAGATGGAACGTTCTGCTGATGTGCTTGCTGCTGGTTTGCTTGAGGTGGCTGACCCATCTCTTTCAAGTAAATTTTTCCTCCGCCAGCATTGGAATGATGAATCTGATGGTGCAAGTGATTCTATACTCAAACATAAACCTCTTTGGTCTACTTATGACAAAAAAGGTGGCAAGAAGAAAAAGAAAAAAGAAAGGAAACAGGGAGATCTGTACCGAACTTATGGAACAAGAGTAATTCCTGTCTTTGTGCTATCATTGGCTGATGTGGACCCACACCTTATGATGGAAGACGAAAGTCTTGTATGGACAAGCAAAGATGTCGTGATTGTACTTGAGCATCAAAATCAGCAGATACCTCTTAGTTATGTGTCAGAAACACAGAGAAGGCATGCCGAACCATCTCAGGTACAGCGTCATATATTGGCAGGGCTTGCTTCTGCTGTGGCAGGGTTGAGTGCACCATATGAGAAGGCTTCTCATGTACATGAAAGGCCAGTCGTGAATTGGCTATGGGCAGCTGGGTGTCATCCATTTGGACCATTCTCTAATACTTCTAAAGTCAGCCAAATGCTTCAAGATGTTGCATTGAGGAACTCAATATATGCGCGTGTAGATTCTGCACTCCACAAAATCCGTGATACGTCAGAGGCTGTACAAACATTTGCTGCCGAGTATCTGAAAACTCCGCTTGGTGAGCCAGTGAAGAGCAAGAAGAACAAAACCACCACTGAGCTATGGGTGGAGAAGTTTTACAAGAAGACCACTAACTTGCCTGAACCTTTCCCACATGAATTAGTTGATAGATTGGAGAACTTCTTAAATAACCTTGAGGAACAGCTAGTAGATTTGTCTTCATCATTGTATGGTCACCGGCTCCAAGATGCACATTATAACAGTTCTGAGATTCTCCAGAGTTCCATATTTACCCAGCAGTATGTAGATCATGTTTTGTCAAACGAGAGGGAAAAGATGAAATGCTGCAACATTGAGTACAAATATCCTGTGCAGTCATCTCAAACTTATGTCTATGGGGGGATTCTTCTTGCTGGATTCGTTGTATATTTTATAGTCATTTTCTTTTCAAACCCTGTACGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

811

Amino Acids

91.72

Weight (kDa)

6.2

Isoelectric Point (pI)

44.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7906 PF25483 69 - 338 4.2e-57 Domain of unknown function (DUF7906)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G16180
fragaria_vesca FvH4_4g19930 FvH4_4g19930
malus_domestica MD16G1152500.v1.1
prunus_persica Prupe.1G115700_v2.0.a1 Prupe.1G115700_v2.0.a1
pyrus_communis pycom16g12970
rosa_chinensis RchiOBHm_Chr4g0425571
rosa_laevigata RLG00000007353
rosa_multiflora Rmu_sc0001900.1_g000001 Rmu_sc0003958.1_g000018
rosa_roxburghii Rroxscaffold_5G00367540
rosa_rugosa Rorug04G0204200
rosa_samantha Rh4AG261100 Rh4BG267000 Rh4CG278200
rosa_wichuraiana Rw4G022610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2229
AatII GACGTC 1 cut(s) 141
Acc16I TGCGCA 1 cut(s) 276
AccB1I GGYRCC 5 cut(s) 76, 117, 125, 193, 764
AccI GTMKAC 2 cut(s) 372, 1487
AccII CGCG 3 cut(s) 59, 186, 1945
AciI CCGC 4 cut(s) 166, 169, 1420, 2024
AclI AACGTT 1 cut(s) 1348
AclWI GGATC 4 cut(s) 92, 594, 635, 648
AcoI YGGCCR 2 cut(s) 320, 816
AcsI RAATTY 3 cut(s) 10, 467, 1409
AcuI CTGAAG 1 cut(s) 870
AcyI GRCGYC 3 cut(s) 77, 126, 138
AfiI CCNNNNNNNGG 1 cut(s) 1621
AjnI CCWGG 2 cut(s) 100, 201
Alw21I GWGCWC 3 cut(s) 942, 1327, 1798
Alw26I GTCTC 2 cut(s) 329, 723
Alw44I GTGCAC 1 cut(s) 1794
AlwI GGATC 4 cut(s) 92, 594, 635, 648
AlwNI CAGNNNCTG 1 cut(s) 1988
Ama87I CYCGRG 1 cut(s) 413
AoxI GGCC 6 cut(s) 320, 816, 820, 1108, 1255, 1829
ApaLI GTGCAC 1 cut(s) 1794
ApoI RAATTY 3 cut(s) 10, 467, 1409
AspA2I CCTAGG 1 cut(s) 644
AspLEI GCGC 5 cut(s) 79, 128, 188, 277, 1945
AspS9I GGNCC 5 cut(s) 821, 873, 1108, 1606, 1874
AsuC2I CCSGG 1 cut(s) 340
AsuHPI GGTGA 5 cut(s) 98, 257, 1162, 2042, 2198
AvaI CYCGRG 1 cut(s) 413
AvaII GGWCC 3 cut(s) 873, 1606, 1874
AvrII CCTAGG 1 cut(s) 644
BaeGI GKGCMC 1 cut(s) 1798
BamHI GGATCC 1 cut(s) 640
BanI GGYRCC 5 cut(s) 76, 117, 125, 193, 764
BbsI GAAGAC 3 cut(s) 1632, 2102, 2181
Bbv12I GWGCWC 3 cut(s) 942, 1327, 1798
BbvI GCAGC 9 cut(s) 279, 406, 941, 1038, 1059, 1354, 1865, 1990, 2303
BceAI ACGGC 3 cut(s) 139, 181, 1220
BcgI CGANNNNNNTGC 2 cut(s) 1639, 1673
BciT130I CCWGG 2 cut(s) 102, 203
BciVI GTATCC 1 cut(s) 994
BcnI CCSGG 1 cut(s) 340
BcoDI GTCTC 2 cut(s) 329, 723
BfaI CTAG 5 cut(s) 645, 933, 980, 1275, 2177
BfmI CTRYAG 4 cut(s) 256, 444, 507, 1117
BfoI RGCGCY 2 cut(s) 80, 129
BfuI GTATCC 1 cut(s) 994
BglII AGATCT 1 cut(s) 1543
BlnI CCTAGG 1 cut(s) 644
Bme1390I CCNGG 3 cut(s) 102, 203, 340
Bme18I GGWCC 3 cut(s) 873, 1606, 1874
BmeT110I CYCGRG 1 cut(s) 413
BmgT120I GGNCC 5 cut(s) 821, 873, 1108, 1606, 1874
BmrFI CCNGG 3 cut(s) 102, 203, 340
BmsI GCATC 5 cut(s) 262, 370, 490, 1684, 2209
BoxI GACNNNNGTC 1 cut(s) 1632
BpiI GAAGAC 3 cut(s) 1632, 2102, 2181
BpmI CTGGAG 2 cut(s) 996, 2231
BpuEI CTTGAG 7 cut(s) 66, 281, 353, 756, 1400, 1691, 2186
BpuMI CCSGG 1 cut(s) 340
Bsa29I ATCGAT 1 cut(s) 807
BsaHI GRCGYC 3 cut(s) 77, 126, 138
BsaI GGTCTC 1 cut(s) 329
BsaJI CCNNGG 4 cut(s) 121, 189, 339, 644
Bsc4I CCNNNNNNNGG 1 cut(s) 1621
Bse118I RCCGGY 5 cut(s) 318, 322, 517, 818, 2208
Bse1I ACTGG 3 cut(s) 216, 1832, 2036
BseBI CCWGG 2 cut(s) 102, 203
BseCI ATCGAT 1 cut(s) 807
BseDI CCNNGG 4 cut(s) 121, 189, 339, 644
BseGI GGATG 4 cut(s) 277, 505, 1324, 1864
BseLI CCNNNNNNNGG 1 cut(s) 1621
BseMII CTCAG 5 cut(s) 38, 125, 1754, 2058, 2229
BseNI ACTGG 3 cut(s) 216, 1832, 2036
BseRI GAGGAG 2 cut(s) 302, 774
BseSI GKGCMC 1 cut(s) 1798
BseX3I CGGCCG 2 cut(s) 320, 816
BseXI GCAGC 9 cut(s) 279, 406, 941, 1038, 1059, 1354, 1865, 1990, 2303
BseYI CCCAGC 4 cut(s) 389, 781, 1856, 2265
BsgI GTGCAG 4 cut(s) 939, 948, 1941, 2363
Bsh1236I CGCG 3 cut(s) 59, 186, 1945
Bsh1285I CGRYCG 2 cut(s) 323, 819
BshFI GGCC 6 cut(s) 322, 818, 822, 1110, 1257, 1831
BshNI GGYRCC 5 cut(s) 76, 117, 125, 193, 764
BshVI ATCGAT 1 cut(s) 807
BsiEI CGRYCG 2 cut(s) 323, 819
BsiHKAI GWGCWC 3 cut(s) 942, 1327, 1798
BsiHKCI CYCGRG 1 cut(s) 413
BsiSI CCGG 7 cut(s) 319, 323, 339, 398, 518, 819, 2209
BslI CCNNNNNNNGG 1 cut(s) 1621
BsmAI GTCTC 2 cut(s) 329, 723
BsnI GGCC 6 cut(s) 322, 818, 822, 1110, 1257, 1831
Bso31I GGTCTC 1 cut(s) 329
BsoBI CYCGRG 1 cut(s) 413
Bsp1286I GDGCHC 3 cut(s) 942, 1327, 1798
Bsp1407I TGTACA 2 cut(s) 1819, 1990
BspACI CCGC 4 cut(s) 166, 169, 1420, 2024
BspANI GGCC 6 cut(s) 322, 818, 822, 1110, 1257, 1831
BspCNI CTCAG 5 cut(s) 39, 124, 1753, 2059, 2230
BspDI ATCGAT 1 cut(s) 807
BspFNI CGCG 3 cut(s) 59, 186, 1945
BspHI TCATGA 1 cut(s) 1165
BspMAI CTGCAG 1 cut(s) 448
BspPI GGATC 4 cut(s) 92, 594, 635, 648
BspQI GCTCTTC 2 cut(s) 1332, 2036
BspT107I GGYRCC 5 cut(s) 76, 117, 125, 193, 764
BspTNI GGTCTC 1 cut(s) 329
BsrFI RCCGGY 5 cut(s) 318, 322, 517, 818, 2208
BsrGI TGTACA 2 cut(s) 1819, 1990
BsrI ACTGG 3 cut(s) 216, 1832, 2036
BssAI RCCGGY 5 cut(s) 318, 322, 517, 818, 2208
BssECI CCNNGG 4 cut(s) 121, 189, 339, 644
BssNI GRCGYC 3 cut(s) 77, 126, 138
BssT1I CCWWGG 1 cut(s) 644
Bst2UI CCWGG 2 cut(s) 102, 203
Bst4CI ACNGT 6 cut(s) 508, 862, 926, 1033, 1121, 2234
Bst6I CTCTTC 4 cut(s) 846, 1332, 1332, 2036
BstACI GRCGYC 3 cut(s) 77, 126, 138
BstAPI GCANNNNNTGC 3 cut(s) 452, 926, 1769
BstAUI TGTACA 2 cut(s) 1819, 1990
BstC8I GCNNGC 7 cut(s) 173, 324, 820, 1365, 1424, 1728, 1770
BstDEI CTNAG 6 cut(s) 47, 111, 1697, 1740, 2067, 2238
BstDSI CCRYGG 1 cut(s) 121
BstEII GGTNACC 2 cut(s) 104, 2204
BstF5I GGATG 4 cut(s) 277, 505, 1324, 1864
BstFNI CGCG 3 cut(s) 59, 186, 1945
BstH2I RGCGCY 2 cut(s) 80, 129
BstHHI GCGC 5 cut(s) 79, 128, 188, 277, 1945
BstMAI GTCTC 2 cut(s) 329, 723
BstMCI CGRYCG 2 cut(s) 323, 819
BstMWI GCNNNNNNNGC 9 cut(s) 83, 386, 400, 452, 572, 926, 1142, 1769, 2032
BstNI CCWGG 2 cut(s) 102, 203
BstNSI RCATGY 3 cut(s) 175, 1004, 1730
BstPAI GACNNNNGTC 1 cut(s) 1632
BstPI GGTNACC 2 cut(s) 104, 2204
BstSCI CCNGG 3 cut(s) 100, 201, 338
BstSFI CTRYAG 4 cut(s) 256, 444, 507, 1117
BstSLI GKGCMC 1 cut(s) 1798
BstUI CGCG 3 cut(s) 59, 186, 1945
BstV1I GCAGC 9 cut(s) 279, 406, 941, 1038, 1059, 1354, 1865, 1990, 2303
BstV2I GAAGAC 3 cut(s) 1632, 2102, 2181
BstX2I RGATCY 3 cut(s) 97, 640, 1543
BstYI RGATCY 3 cut(s) 97, 640, 1543
BstZI CGGCCG 2 cut(s) 320, 816
Bsu15I ATCGAT 1 cut(s) 807
BsuI GTATCC 1 cut(s) 994
BsuRI GGCC 6 cut(s) 322, 818, 822, 1110, 1257, 1831
BsuTUI ATCGAT 1 cut(s) 807
BtgI CCRYGG 1 cut(s) 121
BtgZI GCGATG 2 cut(s) 449, 1196
BtsCI GGATG 4 cut(s) 277, 505, 1324, 1864
BtsIMutI CAGTG 5 cut(s) 44, 119, 209, 2043, 2064
Cac8I GCNNGC 7 cut(s) 173, 324, 820, 1365, 1424, 1728, 1770
CaiI CAGNNNCTG 1 cut(s) 1988
CciI TCATGA 1 cut(s) 1165
CfoI GCGC 5 cut(s) 79, 128, 188, 277, 1945
Cfr10I RCCGGY 5 cut(s) 318, 322, 517, 818, 2208
Cfr13I GGNCC 5 cut(s) 821, 873, 1108, 1606, 1874
ClaI ATCGAT 1 cut(s) 807
CseI GACGC 2 cut(s) 1296, 1739
CspCI CAANNNNNGTGG 8 cut(s) 492, 527, 594, 629, 976, 1011, 1486, 1521
DdeI CTNAG 6 cut(s) 47, 111, 1697, 1740, 2067, 2238
DinI GGCGCC 2 cut(s) 78, 127
EaeI YGGCCR 2 cut(s) 320, 816
EagI CGGCCG 2 cut(s) 320, 816
Eam1104I CTCTTC 4 cut(s) 846, 1332, 1332, 2036
EarI CTCTTC 4 cut(s) 846, 1332, 1332, 2036
EciI GGCGGA 2 cut(s) 155, 1409
EclXI CGGCCG 2 cut(s) 320, 816
Eco130I CCWWGG 1 cut(s) 644
Eco31I GGTCTC 1 cut(s) 329
Eco32I GATATC 1 cut(s) 355
Eco47I GGWCC 3 cut(s) 873, 1606, 1874
Eco52I CGGCCG 2 cut(s) 320, 816
Eco57I CTGAAG 1 cut(s) 870
Eco88I CYCGRG 1 cut(s) 413
Eco91I GGTNACC 2 cut(s) 104, 2204
EcoO65I GGTNACC 2 cut(s) 104, 2204
EcoRII CCWGG 2 cut(s) 100, 201
EcoRV GATATC 1 cut(s) 355
EcoT14I CCWWGG 1 cut(s) 644
EgeI GGCGCC 2 cut(s) 78, 127
EheI GGCGCC 2 cut(s) 78, 127
ErhI CCWWGG 1 cut(s) 644
FalI AAGNNNNNCTT 4 cut(s) 290, 322, 471, 503
FauNDI CATATG 1 cut(s) 1801
FblI GTMKAC 2 cut(s) 372, 1487
FokI GGATG 4 cut(s) 284, 512, 1331, 1851
FseI GGCCGGCC 1 cut(s) 822
FspAI RTGCGCAY 1 cut(s) 276
FspBI CTAG 5 cut(s) 645, 933, 980, 1275, 2177
FspI TGCGCA 1 cut(s) 276
GlaI GCGC 5 cut(s) 78, 127, 187, 276, 1944
GsaI CCCAGC 4 cut(s) 393, 785, 1860, 2269
GsuI CTGGAG 2 cut(s) 996, 2231
HaeII RGCGCY 2 cut(s) 80, 129
HaeIII GGCC 6 cut(s) 322, 818, 822, 1110, 1257, 1831
HapII CCGG 7 cut(s) 319, 323, 339, 398, 518, 819, 2209
HgaI GACGC 2 cut(s) 1296, 1739
HhaI GCGC 5 cut(s) 79, 128, 188, 277, 1945
Hin1I GRCGYC 3 cut(s) 77, 126, 138
Hin6I GCGC 5 cut(s) 77, 126, 186, 275, 1943
HinP1I GCGC 5 cut(s) 77, 126, 186, 275, 1943
HindIII AAGCTT 1 cut(s) 84
HinfI GANTC 8 cut(s) 71, 461, 1439, 1457, 1952, 2242, 2374, 2388
HpaII CCGG 7 cut(s) 319, 323, 339, 398, 518, 819, 2209
HphI GGTGA 5 cut(s) 98, 257, 1162, 2042, 2198
Hpy166II GTNNAC 6 cut(s) 373, 828, 1199, 1488, 1606, 1796
Hpy8I GTNNAC 6 cut(s) 373, 828, 1199, 1488, 1606, 1796
Hpy99I CGWCG 1 cut(s) 140
HpyAV CCTTC 9 cut(s) 139, 391, 412, 421, 468, 1099, 1274, 1716, 1801
HpyCH4III ACNGT 6 cut(s) 508, 862, 926, 1033, 1121, 2234
HpyCH4IV ACGT 3 cut(s) 138, 1348, 1979
HpyF10VI GCNNNNNNNGC 9 cut(s) 83, 386, 400, 452, 572, 926, 1142, 1769, 2032
HpyF3I CTNAG 6 cut(s) 47, 111, 1697, 1740, 2067, 2238
HpySE526I ACGT 3 cut(s) 138, 1348, 1979
Hsp92I GRCGYC 3 cut(s) 77, 126, 138
HspAI GCGC 5 cut(s) 77, 126, 186, 275, 1943
KasI GGCGCC 2 cut(s) 76, 125
KroI GCCGGC 2 cut(s) 322, 818
KroNI GCCGGC 2 cut(s) 324, 820
LguI GCTCTTC 2 cut(s) 1332, 2036
LmnI GCTCC 7 cut(s) 161, 180, 289, 400, 514, 1015, 2217
Lsp1109I GCAGC 9 cut(s) 279, 406, 941, 1038, 1059, 1354, 1865, 1990, 2303
LweI GCATC 5 cut(s) 262, 370, 490, 1684, 2209
MaeI CTAG 5 cut(s) 645, 933, 980, 1275, 2177
MaeII ACGT 3 cut(s) 138, 1348, 1979
MaeIII GTNAC 3 cut(s) 104, 143, 2204
MfeI CAATTG 2 cut(s) 1137, 1230
MflI RGATCY 3 cut(s) 97, 640, 1543
MhlI GDGCHC 3 cut(s) 942, 1327, 1798
Mly113I GGCGCC 2 cut(s) 77, 126
MlyI GAGTC 2 cut(s) 80, 470
MmeI TCCRAC 2 cut(s) 564, 943
MroNI GCCGGC 2 cut(s) 322, 818
MseI TTAA 2 cut(s) 1332, 2156
MslI CAYNNNNRTG 3 cut(s) 1215, 1431, 1821
MspA1I CMGCKG 1 cut(s) 1856
MspI CCGG 7 cut(s) 319, 323, 339, 398, 518, 819, 2209
MspR9I CCNGG 3 cut(s) 102, 203, 340
MunI CAATTG 2 cut(s) 1137, 1230
MvaI CCWGG 2 cut(s) 102, 203
MvnI CGCG 3 cut(s) 59, 186, 1945
MwoI GCNNNNNNNGC 9 cut(s) 83, 386, 400, 452, 572, 926, 1142, 1769, 2032
NaeI GCCGGC 2 cut(s) 324, 820
NarI GGCGCC 2 cut(s) 77, 126
NciI CCSGG 1 cut(s) 340
NdeI CATATG 1 cut(s) 1801
NgoMIV GCCGGC 2 cut(s) 322, 818
NmeAIII GCCGAG 3 cut(s) 214, 794, 2032
NmuCI GTSAC 3 cut(s) 104, 143, 2204
NsbI TGCGCA 1 cut(s) 276
NspI RCATGY 3 cut(s) 175, 1004, 1730
PaeI GCATGC 2 cut(s) 175, 1730
PaeR7I CTCGAG 1 cut(s) 413
PagI TCATGA 1 cut(s) 1165
PciSI GCTCTTC 2 cut(s) 1332, 2036
PcsI WCGNNNNNNNCGW 1 cut(s) 821
PdiI GCCGGC 2 cut(s) 324, 820
PfeI GAWTC 6 cut(s) 1439, 1457, 1952, 2242, 2374, 2388
PleI GAGTC 2 cut(s) 79, 469
PluTI GGCGCC 2 cut(s) 80, 129
PpsI GAGTC 2 cut(s) 79, 469
PshAI GACNNNNGTC 1 cut(s) 1632
PsiI TTATAA 1 cut(s) 2229
Psp1406I AACGTT 1 cut(s) 1348
Psp6I CCWGG 2 cut(s) 100, 201
PspEI GGTNACC 2 cut(s) 104, 2204
PspFI CCCAGC 4 cut(s) 389, 781, 1856, 2265
PspGI CCWGG 2 cut(s) 100, 201
PspPI GGNCC 5 cut(s) 821, 873, 1108, 1606, 1874
PstI CTGCAG 1 cut(s) 448
PstNI CAGNNNCTG 1 cut(s) 1988
PsuI RGATCY 3 cut(s) 97, 640, 1543
PvuII CAGCTG 1 cut(s) 1856
RigI GGCCGGCC 1 cut(s) 822
RseI CAYNNNNRTG 3 cut(s) 1215, 1431, 1821
SapI GCTCTTC 2 cut(s) 1332, 2036
SaqAI TTAA 2 cut(s) 1332, 2156
Sau96I GGNCC 5 cut(s) 821, 873, 1108, 1606, 1874
SbfI CCTGCAGG 1 cut(s) 448
SchI GAGTC 2 cut(s) 80, 470
ScrFI CCNGG 3 cut(s) 102, 203, 340
SdaI CCTGCAGG 1 cut(s) 448
SduI GDGCHC 3 cut(s) 942, 1327, 1798
SfaNI GCATC 5 cut(s) 262, 370, 490, 1684, 2209
SfcI CTRYAG 4 cut(s) 256, 444, 507, 1117
SfoI GGCGCC 2 cut(s) 78, 127
Sfr274I CTCGAG 1 cut(s) 413
SinI GGWCC 3 cut(s) 873, 1606, 1874
SlaI CTCGAG 1 cut(s) 413
SmiMI CAYNNNNRTG 3 cut(s) 1215, 1431, 1821
SmlI CTYRAG 8 cut(s) 81, 296, 332, 413, 771, 1379, 1670, 2165
SmoI CTYRAG 8 cut(s) 81, 296, 332, 413, 771, 1379, 1670, 2165
SphI GCATGC 2 cut(s) 175, 1730
Sse8387I CCTGCAGG 1 cut(s) 448
SsiI CCGC 4 cut(s) 166, 169, 1420, 2024
SspDI GGCGCC 2 cut(s) 76, 125
SspI AATATT 4 cut(s) 609, 895, 1096, 1129
SspMI CTAG 5 cut(s) 645, 933, 980, 1275, 2177
StyD4I CCNGG 3 cut(s) 100, 201, 338
StyI CCWWGG 1 cut(s) 644
TaaI ACNGT 6 cut(s) 508, 862, 926, 1033, 1121, 2234
TaiI ACGT 3 cut(s) 141, 1351, 1982
TaqI TCGA 4 cut(s) 351, 357, 414, 807
TatI WGTACW 5 cut(s) 827, 1666, 1819, 1990, 2328
TauI GCSGC 1 cut(s) 171
TfiI GAWTC 6 cut(s) 1439, 1457, 1952, 2242, 2374, 2388
Tru1I TTAA 2 cut(s) 1332, 2156
Tru9I TTAA 2 cut(s) 1332, 2156
TscAI CASTG 5 cut(s) 51, 119, 216, 2043, 2071
TseFI GTSAC 3 cut(s) 104, 143, 2204
Tsp45I GTSAC 3 cut(s) 104, 143, 2204
TspDTI ATGAA 9 cut(s) 1154, 1194, 1283, 1289, 1452, 1839, 2142, 2181, 2324
TspGWI ACGGA 4 cut(s) 80, 131, 904, 1961
TspRI CASTG 5 cut(s) 51, 119, 216, 2043, 2071
VneI GTGCAC 1 cut(s) 1794
VpaK11BI GGWCC 3 cut(s) 873, 1606, 1874
XapI RAATTY 3 cut(s) 10, 467, 1409
XceI RCATGY 3 cut(s) 175, 1004, 1730
XcmI CCANNNNNNNNNTGG 2 cut(s) 1312, 1839
XhoI CTCGAG 1 cut(s) 413
XmaJI CCTAGG 1 cut(s) 644
XmiI GTMKAC 2 cut(s) 372, 1487
XspI CTAG 5 cut(s) 645, 933, 980, 1275, 2177
ZraI GACGTC 1 cut(s) 139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.