Rmu_sc0001900.1_g000001

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001900.1
OG0014038
Physical Location & Seq
Reverse (-)
2190 .. 11862
9673 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001900.1_g000001.1.cds

Sequence Viewer

Length: 2955 bp
atggctgcaaattcactaccaatactatatgctcttgttctcgcactgagcctgttcgcgtttcaatccgagtcggcgcctcaagctttccggagagatcctggtcaccctcagtggcaccacggcgccttccacgacgtccgtgacaccattcgctccgatgtccgccgcatgctccattctcgcgccgaggtgccgttccaggttccactggaagtgaatgtggtgcttgttggtttcaatggtgatggaggctataggtactcggtggatgcgcacaaattggaggagctgctcaagatcagcttcccgacacaccgaccggcgtgtcttgagaccggggaggctctcgatatcgagcatcaaattgtctacaatgccttccctgctgggcagccggagcttatagctctcgagaaggctttgaaagaggcgatggttcctgcaggaaataccagagagtctgaatttggaagggaagtacctctttttgaggtggatgcaactgtagtggagccggtatttcagaggttgtattcctatatatttgacacagacaattcggctgtttctgctatggagttggatcgccaagtgccaagtgcaatatttgtggtcaattttgataaggtcagaatggaacctaggaataaggaaattgatcttgacaacttgatgtatggaaaaattacacaactaactgatgatgatatgcaaaaacaagagggtgactatatttatcgccatcggtacaatggaggaggtgcctctcaagtttggctgggctatggcagatatgtagtgatcgatctctcagccggtccgtgtacttatggaaagatcgaaactgaagagggaactgtcagttctcggaccctgccacgactacggaatattatgtttccaagaggaatgggtgcagaccgtgcagctagtgatcactctacacatgatgtatttgttggacaacttgcctctctagtatccaccacaattgagcatgttatagctccagatgttagatttgaaactgttgatctgacaacaaggctgcttttaccaataattgtgctgcaaaatcataatcggtacaatattatagagaagggccacaactacagtataaatattgaagcaattgaggcacaggtgaagaaaatggttcatgatgggcaagaagttgtgatcgttgggggttcacattcattacatcgccatgagaagttggcaattgccgtttcaaaagctatgcgaggccattcccttcaagaaactaggaatgatggacgctttcatgttcataccaagacatatctggatggtgctcttcttaaagaagagatggaacgttctgctgatgtgcttgctgctggtttgcttgaggtggctgacccatctctttcgagtaaatttttcctccgccagcattggaatgatgaatctgttggtgcaagtgattctatactcaaacataaacctctttggtctacttatgacaaaaaaggtggcaagaagaaaaagaaaaaagaaaggaaacagggagatctgtaccgaacttatggaacaagagtaattcctgtctttgtgctatcattggctgatgtggacccacaccttatgatggaagacgaaagtcttgtatggacaagcaaagatgtcgtgattgtacttgagcatcaaaatcagcagatacctcttagttatgtgtcagaaacacagagaaggcatgccgaaccatctcaggtacagcgtcatatattggcagggcttgcttctgctgtggcagggttgagtgcaccatatgagaaggcttctcatgtacatgaaaggccagtcgtgaattggctatgggcagctgggtgtcatccatttggaccattctctaatacttctaaagtcagccaaatgcttcaagatgttgcattgaggaactcaatatatgcgcgtgtagattctgcactccacaaaatccgtgatacgtcagaggctgtacaaacatttgctgccgagtatctgaaaactccgcttggtgagccagtgaagggcaagaagaacaaaaccaccactgagctatgggtggagaagttttacaagaagaccactaacttgcctgaacctttcccacatgaattagttgatagattggagaacttcttaaataaccttgaggaacagctagtagatttgtcttcatcattgtatggtcaccggctccaagatgcacatttcaacagttctgagattctccagagttccatatttacccagcagtatgtagatcatgttttgtcaaacgagagggaaaagatgaaatgctgcaacattgagtacaaatatcctgtgcagtcatctcaaacttatgtctatggggggattcttcttgctggattcgttggagaggaccgcgaagtggctactccttggttcaagtttctgtgggaatcccacagaacagtgctggacatcttatggaacaactcaaagttcgatgctctttatgcgttgagaagagctttaaaagaacttaagccagacagatttgcagttgattggatcatctgttacttggctgcactttcagttgccctttataatgctacctctcatttggaacttaaaaaagggaaagaaagcaactcgaggatggttaatctacttgagtttagtattgatcccaaactagacagaggacatgtgctttcaagatcatctcttctatcagaactggtctcgactggtgttttgagctatgcaacccaggaagtgcaagatctctaccaacacctggagcatgaacatgaacatgaactgctacctacagatcttttgaccaaaatttcaaaaattaggggtaagctgtcttcaccttcttctgttccagaactacaactgtctcgacatgctcccgctcttgaaaagcttggtactttgaggttgctccaggaggtgtgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

984

Amino Acids

111.34

Weight (kDa)

6.26

Isoelectric Point (pI)

43.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G16180
fragaria_vesca FvH4_4g19930 FvH4_4g19930
malus_domestica MD16G1152500.v1.1
prunus_persica Prupe.1G115700_v2.0.a1 Prupe.1G115700_v2.0.a1
pyrus_communis pycom16g12970
rosa_chinensis RchiOBHm_Chr4g0425571
rosa_laevigata RLG00000007353
rosa_multiflora Rmu_sc0001900.1_g000001 Rmu_sc0003958.1_g000018
rosa_roxburghii Rroxscaffold_5G00367540
rosa_rugosa Rorug04G0204200
rosa_samantha Rh4AG261100 Rh4BG267000 Rh4CG278200
rosa_wichuraiana Rw4G022610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2592
AasI GACNNNNNNGTC 1 cut(s) 327
AatII GACGTC 1 cut(s) 141
Acc16I TGCGCA 1 cut(s) 276
AccB1I GGYRCC 5 cut(s) 76, 117, 125, 193, 764
AccB7I CCANNNNNTGG 1 cut(s) 2785
AccBSI CCGCTC 1 cut(s) 2909
AccI GTMKAC 2 cut(s) 372, 1487
AccII CGCG 4 cut(s) 59, 186, 1945, 2406
AccIII TCCGGA 1 cut(s) 90
AciI CCGC 6 cut(s) 166, 169, 1420, 2024, 2404, 2907
AclI AACGTT 1 cut(s) 1348
AclWI GGATC 4 cut(s) 92, 594, 2561, 2666
AcsI RAATTY 4 cut(s) 10, 467, 1409, 2835
AcuI CTGAAG 1 cut(s) 870
AcyI GRCGYC 3 cut(s) 77, 126, 138
AfiI CCNNNNNNNGG 4 cut(s) 1621, 2042, 2410, 2785
AflII CTTAAG 1 cut(s) 2525
AflIII ACRYGT 1 cut(s) 2692
AjnI CCWGG 5 cut(s) 100, 201, 2757, 2784, 2940
Alw21I GWGCWC 2 cut(s) 1327, 1798
Alw26I GTCTC 3 cut(s) 329, 2734, 2898
Alw44I GTGCAC 1 cut(s) 1794
AlwI GGATC 4 cut(s) 92, 594, 2561, 2666
AlwNI CAGNNNCTG 1 cut(s) 1988
Ama87I CYCGRG 2 cut(s) 413, 2638
Aor13HI TCCGGA 1 cut(s) 90
AoxI GGCC 3 cut(s) 1108, 1255, 1829
ApaLI GTGCAC 1 cut(s) 1794
ApoI RAATTY 4 cut(s) 10, 467, 1409, 2835
ArsI GACNNNNNNTTYG 2 cut(s) 2725, 2757
AspA2I CCTAGG 1 cut(s) 644
AspLEI GCGC 5 cut(s) 79, 128, 188, 277, 1945
AspS9I GGNCC 6 cut(s) 821, 873, 1108, 1606, 1874, 2401
AsuC2I CCSGG 1 cut(s) 340
AsuHPI GGTGA 7 cut(s) 98, 257, 740, 1162, 2042, 2198, 2856
AvaI CYCGRG 2 cut(s) 413, 2638
AvaII GGWCC 5 cut(s) 821, 873, 1606, 1874, 2401
AvrII CCTAGG 1 cut(s) 644
BaeGI GKGCMC 1 cut(s) 1798
BanI GGYRCC 5 cut(s) 76, 117, 125, 193, 764
BarI GAAGNNNNNNTAC 2 cut(s) 2845, 2877
BbsI GAAGAC 4 cut(s) 1632, 2102, 2181, 2853
Bbv12I GWGCWC 2 cut(s) 1327, 1798
BceAI ACGGC 3 cut(s) 139, 181, 1220
BcgI CGANNNNNNTGC 2 cut(s) 1639, 1673
BciT130I CCWGG 5 cut(s) 102, 203, 2759, 2786, 2942
BciVI GTATCC 1 cut(s) 994
BclI TGATCA 1 cut(s) 937
BcnI CCSGG 1 cut(s) 340
BcoDI GTCTC 3 cut(s) 329, 2734, 2898
BfaI CTAG 6 cut(s) 645, 933, 980, 1275, 2177, 2681
BfmI CTRYAG 5 cut(s) 256, 444, 507, 1117, 2817
BfoI RGCGCY 2 cut(s) 80, 129
BfrI CTTAAG 1 cut(s) 2525
BfuI GTATCC 1 cut(s) 994
BglII AGATCT 3 cut(s) 1543, 2770, 2821
BlnI CCTAGG 1 cut(s) 644
Bme1390I CCNGG 6 cut(s) 102, 203, 340, 2759, 2786, 2942
Bme18I GGWCC 5 cut(s) 821, 873, 1606, 1874, 2401
BmeT110I CYCGRG 2 cut(s) 413, 2638
BmgT120I GGNCC 6 cut(s) 821, 873, 1108, 1606, 1874, 2401
BmrFI CCNGG 6 cut(s) 102, 203, 340, 2759, 2786, 2942
BmsI GCATC 6 cut(s) 262, 370, 490, 1684, 2209, 2479
BoxI GACNNNNGTC 1 cut(s) 1632
BpiI GAAGAC 4 cut(s) 1632, 2102, 2181, 2853
BpmI CTGGAG 4 cut(s) 996, 2231, 2807, 2924
BpuEI CTTGAG 8 cut(s) 66, 281, 353, 756, 1400, 1691, 2186, 2678
BpuMI CCSGG 1 cut(s) 340
Bsa29I ATCGAT 1 cut(s) 807
BsaHI GRCGYC 3 cut(s) 77, 126, 138
BsaI GGTCTC 2 cut(s) 329, 2734
BsaJI CCNNGG 6 cut(s) 121, 189, 339, 644, 2420, 2757
BsaWI WCCGGW 1 cut(s) 90
Bsc4I CCNNNNNNNGG 4 cut(s) 1621, 2042, 2410, 2785
Bse118I RCCGGY 4 cut(s) 322, 517, 818, 2208
Bse1I ACTGG 5 cut(s) 216, 1832, 2036, 2730, 2740
BseAI TCCGGA 1 cut(s) 90
BseBI CCWGG 5 cut(s) 102, 203, 2759, 2786, 2942
BseCI ATCGAT 1 cut(s) 807
BseDI CCNNGG 6 cut(s) 121, 189, 339, 644, 2420, 2757
BseGI GGATG 5 cut(s) 277, 505, 1324, 1864, 2649
BseLI CCNNNNNNNGG 4 cut(s) 1621, 2042, 2410, 2785
BseMII CTCAG 6 cut(s) 38, 125, 828, 1754, 2058, 2229
BseNI ACTGG 5 cut(s) 216, 1832, 2036, 2730, 2740
BseRI GAGGAG 2 cut(s) 302, 774
BseSI GKGCMC 1 cut(s) 1798
BseYI CCCAGC 4 cut(s) 389, 781, 1856, 2265
BsgI GTGCAG 5 cut(s) 939, 948, 1941, 2363, 2556
Bsh1236I CGCG 4 cut(s) 59, 186, 1945, 2406
Bsh1285I CGRYCG 1 cut(s) 323
BshFI GGCC 3 cut(s) 1110, 1257, 1831
BshNI GGYRCC 5 cut(s) 76, 117, 125, 193, 764
BshVI ATCGAT 1 cut(s) 807
BsiEI CGRYCG 1 cut(s) 323
BsiHKAI GWGCWC 2 cut(s) 1327, 1798
BsiHKCI CYCGRG 2 cut(s) 413, 2638
BsiSI CCGG 7 cut(s) 91, 323, 339, 398, 518, 819, 2209
BslI CCNNNNNNNGG 4 cut(s) 1621, 2042, 2410, 2785
BsmAI GTCTC 3 cut(s) 329, 2734, 2898
BsnI GGCC 3 cut(s) 1110, 1257, 1831
Bso31I GGTCTC 2 cut(s) 329, 2734
BsoBI CYCGRG 2 cut(s) 413, 2638
Bsp1286I GDGCHC 2 cut(s) 1327, 1798
Bsp13I TCCGGA 1 cut(s) 90
Bsp1407I TGTACA 2 cut(s) 1819, 1990
BspACI CCGC 6 cut(s) 166, 169, 1420, 2024, 2404, 2907
BspANI GGCC 3 cut(s) 1110, 1257, 1831
BspCNI CTCAG 6 cut(s) 39, 124, 827, 1753, 2059, 2230
BspDI ATCGAT 1 cut(s) 807
BspEI TCCGGA 1 cut(s) 90
BspFNI CGCG 4 cut(s) 59, 186, 1945, 2406
BspHI TCATGA 1 cut(s) 1165
BspMAI CTGCAG 1 cut(s) 448
BspPI GGATC 4 cut(s) 92, 594, 2561, 2666
BspQI GCTCTTC 2 cut(s) 1332, 2503
BspT107I GGYRCC 5 cut(s) 76, 117, 125, 193, 764
BspTI CTTAAG 1 cut(s) 2525
BspTNI GGTCTC 2 cut(s) 329, 2734
BsrBI CCGCTC 1 cut(s) 2909
BsrFI RCCGGY 4 cut(s) 322, 517, 818, 2208
BsrGI TGTACA 2 cut(s) 1819, 1990
BsrI ACTGG 5 cut(s) 216, 1832, 2036, 2730, 2740
BssAI RCCGGY 4 cut(s) 322, 517, 818, 2208
BssECI CCNNGG 6 cut(s) 121, 189, 339, 644, 2420, 2757
BssNI GRCGYC 3 cut(s) 77, 126, 138
BssT1I CCWWGG 2 cut(s) 644, 2420
Bst2UI CCWGG 5 cut(s) 102, 203, 2759, 2786, 2942
Bst4CI ACNGT 8 cut(s) 508, 862, 926, 1033, 1121, 2234, 2455, 2892
Bst6I CTCTTC 5 cut(s) 846, 1332, 1332, 2503, 2718
BstACI GRCGYC 3 cut(s) 77, 126, 138
BstAFI CTTAAG 1 cut(s) 2525
BstAPI GCANNNNNTGC 2 cut(s) 926, 1769
BstAUI TGTACA 2 cut(s) 1819, 1990
BstC8I GCNNGC 5 cut(s) 173, 1365, 1424, 1728, 1770
BstDEI CTNAG 7 cut(s) 47, 111, 814, 1697, 1740, 2067, 2238
BstDSI CCRYGG 1 cut(s) 121
BstEII GGTNACC 2 cut(s) 104, 2204
BstF5I GGATG 5 cut(s) 277, 505, 1324, 1864, 2649
BstFNI CGCG 4 cut(s) 59, 186, 1945, 2406
BstH2I RGCGCY 2 cut(s) 80, 129
BstHHI GCGC 5 cut(s) 79, 128, 188, 277, 1945
BstMAI GTCTC 3 cut(s) 329, 2734, 2898
BstMCI CGRYCG 1 cut(s) 323
BstMWI GCNNNNNNNGC 9 cut(s) 83, 386, 400, 572, 926, 1142, 1769, 2032, 2498
BstNI CCWGG 5 cut(s) 102, 203, 2759, 2786, 2942
BstNSI RCATGY 5 cut(s) 175, 1004, 1730, 2696, 2903
BstPAI GACNNNNGTC 1 cut(s) 1632
BstPI GGTNACC 2 cut(s) 104, 2204
BstSCI CCNGG 6 cut(s) 100, 201, 338, 2757, 2784, 2940
BstSFI CTRYAG 5 cut(s) 256, 444, 507, 1117, 2817
BstSLI GKGCMC 1 cut(s) 1798
BstUI CGCG 4 cut(s) 59, 186, 1945, 2406
BstV2I GAAGAC 4 cut(s) 1632, 2102, 2181, 2853
BstX2I RGATCY 4 cut(s) 97, 1543, 2770, 2821
BstYI RGATCY 4 cut(s) 97, 1543, 2770, 2821
Bsu15I ATCGAT 1 cut(s) 807
BsuI GTATCC 1 cut(s) 994
BsuRI GGCC 3 cut(s) 1110, 1257, 1831
BsuTUI ATCGAT 1 cut(s) 807
BtgI CCRYGG 1 cut(s) 121
BtgZI GCGATG 2 cut(s) 449, 1196
BtsCI GGATG 5 cut(s) 277, 505, 1324, 1864, 2649
BtsIMutI CAGTG 6 cut(s) 44, 119, 209, 2043, 2064, 2460
Cac8I GCNNGC 5 cut(s) 173, 1365, 1424, 1728, 1770
CaiI CAGNNNCTG 1 cut(s) 1988
CciI TCATGA 1 cut(s) 1165
CfoI GCGC 5 cut(s) 79, 128, 188, 277, 1945
Cfr10I RCCGGY 4 cut(s) 322, 517, 818, 2208
Cfr13I GGNCC 6 cut(s) 821, 873, 1108, 1606, 1874, 2401
ClaI ATCGAT 1 cut(s) 807
CpoI CGGWCCG 1 cut(s) 821
CseI GACGC 2 cut(s) 1296, 1739
CspCI CAANNNNNGTGG 8 cut(s) 492, 527, 594, 629, 976, 1011, 1486, 1521
CspI CGGWCCG 1 cut(s) 821
DdeI CTNAG 7 cut(s) 47, 111, 814, 1697, 1740, 2067, 2238
DinI GGCGCC 2 cut(s) 78, 127
DraI TTTAAA 1 cut(s) 2517
DrdI GACNNNNNNGTC 1 cut(s) 327
DseDI GACNNNNNNGTC 1 cut(s) 327
Eam1104I CTCTTC 5 cut(s) 846, 1332, 1332, 2503, 2718
EarI CTCTTC 5 cut(s) 846, 1332, 1332, 2503, 2718
EciI GGCGGA 2 cut(s) 155, 1409
Eco130I CCWWGG 2 cut(s) 644, 2420
Eco31I GGTCTC 2 cut(s) 329, 2734
Eco32I GATATC 1 cut(s) 355
Eco47I GGWCC 5 cut(s) 821, 873, 1606, 1874, 2401
Eco57I CTGAAG 1 cut(s) 870
Eco88I CYCGRG 2 cut(s) 413, 2638
Eco91I GGTNACC 2 cut(s) 104, 2204
EcoO65I GGTNACC 2 cut(s) 104, 2204
EcoRII CCWGG 5 cut(s) 100, 201, 2757, 2784, 2940
EcoRV GATATC 1 cut(s) 355
EcoT14I CCWWGG 2 cut(s) 644, 2420
EgeI GGCGCC 2 cut(s) 78, 127
EheI GGCGCC 2 cut(s) 78, 127
ErhI CCWWGG 2 cut(s) 644, 2420
FalI AAGNNNNNCTT 4 cut(s) 290, 322, 471, 503
FauI CCCGC 1 cut(s) 2914
FauNDI CATATG 1 cut(s) 1801
FbaI TGATCA 1 cut(s) 937
FblI GTMKAC 2 cut(s) 372, 1487
FokI GGATG 5 cut(s) 284, 512, 1331, 1851, 2656
FspAI RTGCGCAY 1 cut(s) 276
FspBI CTAG 6 cut(s) 645, 933, 980, 1275, 2177, 2681
FspI TGCGCA 1 cut(s) 276
GlaI GCGC 5 cut(s) 78, 127, 187, 276, 1944
GsaI CCCAGC 4 cut(s) 393, 785, 1860, 2269
GsuI CTGGAG 4 cut(s) 996, 2231, 2807, 2924
HaeII RGCGCY 2 cut(s) 80, 129
HaeIII GGCC 3 cut(s) 1110, 1257, 1831
HapII CCGG 7 cut(s) 91, 323, 339, 398, 518, 819, 2209
HgaI GACGC 2 cut(s) 1296, 1739
HhaI GCGC 5 cut(s) 79, 128, 188, 277, 1945
Hin1I GRCGYC 3 cut(s) 77, 126, 138
Hin6I GCGC 5 cut(s) 77, 126, 186, 275, 1943
HinP1I GCGC 5 cut(s) 77, 126, 186, 275, 1943
HindIII AAGCTT 2 cut(s) 84, 2918
HinfI GANTC 9 cut(s) 71, 461, 1439, 1457, 1952, 2242, 2374, 2388, 2441
HpaII CCGG 7 cut(s) 91, 323, 339, 398, 518, 819, 2209
HphI GGTGA 7 cut(s) 98, 257, 740, 1162, 2042, 2198, 2856
Hpy166II GTNNAC 6 cut(s) 373, 828, 1199, 1488, 1606, 1796
Hpy8I GTNNAC 6 cut(s) 373, 828, 1199, 1488, 1606, 1796
Hpy99I CGWCG 1 cut(s) 140
HpyCH4III ACNGT 8 cut(s) 508, 862, 926, 1033, 1121, 2234, 2455, 2892
HpyCH4IV ACGT 3 cut(s) 138, 1348, 1979
HpyF10VI GCNNNNNNNGC 9 cut(s) 83, 386, 400, 572, 926, 1142, 1769, 2032, 2498
HpyF3I CTNAG 7 cut(s) 47, 111, 814, 1697, 1740, 2067, 2238
HpySE526I ACGT 3 cut(s) 138, 1348, 1979
Hsp92I GRCGYC 3 cut(s) 77, 126, 138
HspAI GCGC 5 cut(s) 77, 126, 186, 275, 1943
KasI GGCGCC 2 cut(s) 76, 125
Kpn2I TCCGGA 1 cut(s) 90
Ksp22I TGATCA 1 cut(s) 937
LguI GCTCTTC 2 cut(s) 1332, 2503
LweI GCATC 6 cut(s) 262, 370, 490, 1684, 2209, 2479
MaeI CTAG 6 cut(s) 645, 933, 980, 1275, 2177, 2681
MaeII ACGT 3 cut(s) 138, 1348, 1979
MaeIII GTNAC 5 cut(s) 104, 143, 728, 2204, 2561
MbiI CCGCTC 1 cut(s) 2909
MfeI CAATTG 3 cut(s) 993, 1137, 1230
MflI RGATCY 4 cut(s) 97, 1543, 2770, 2821
MhlI GDGCHC 2 cut(s) 1327, 1798
Mly113I GGCGCC 2 cut(s) 77, 126
MlyI GAGTC 2 cut(s) 80, 470
MmeI TCCRAC 3 cut(s) 564, 943, 2374
MroI TCCGGA 1 cut(s) 90
MseI TTAA 6 cut(s) 1332, 2156, 2516, 2526, 2616, 2649
MslI CAYNNNNRTG 5 cut(s) 1215, 1431, 1821, 2796, 2802
MspA1I CMGCKG 1 cut(s) 1856
MspCI CTTAAG 1 cut(s) 2525
MspI CCGG 7 cut(s) 91, 323, 339, 398, 518, 819, 2209
MspR9I CCNGG 6 cut(s) 102, 203, 340, 2759, 2786, 2942
MunI CAATTG 3 cut(s) 993, 1137, 1230
MvaI CCWGG 5 cut(s) 102, 203, 2759, 2786, 2942
MvnI CGCG 4 cut(s) 59, 186, 1945, 2406
MwoI GCNNNNNNNGC 9 cut(s) 83, 386, 400, 572, 926, 1142, 1769, 2032, 2498
NarI GGCGCC 2 cut(s) 77, 126
NciI CCSGG 1 cut(s) 340
NdeI CATATG 1 cut(s) 1801
NmeAIII GCCGAG 2 cut(s) 214, 2032
NmuCI GTSAC 4 cut(s) 104, 143, 728, 2204
NsbI TGCGCA 1 cut(s) 276
NspI RCATGY 5 cut(s) 175, 1004, 1730, 2696, 2903
PaeI GCATGC 2 cut(s) 175, 1730
PaeR7I CTCGAG 2 cut(s) 413, 2638
PagI TCATGA 1 cut(s) 1165
PciI ACATGT 1 cut(s) 2692
PciSI GCTCTTC 2 cut(s) 1332, 2503
PfeI GAWTC 7 cut(s) 1439, 1457, 1952, 2242, 2374, 2388, 2441
PflMI CCANNNNNTGG 1 cut(s) 2785
PfoI TCCNGGA 1 cut(s) 2940
PleI GAGTC 2 cut(s) 79, 469
PluTI GGCGCC 2 cut(s) 80, 129
PpsI GAGTC 2 cut(s) 79, 469
PscI ACATGT 1 cut(s) 2692
PshAI GACNNNNGTC 1 cut(s) 1632
PsiI TTATAA 1 cut(s) 2592
Psp1406I AACGTT 1 cut(s) 1348
Psp6I CCWGG 5 cut(s) 100, 201, 2757, 2784, 2940
PspEI GGTNACC 2 cut(s) 104, 2204
PspFI CCCAGC 4 cut(s) 389, 781, 1856, 2265
PspGI CCWGG 5 cut(s) 100, 201, 2757, 2784, 2940
PspPI GGNCC 6 cut(s) 821, 873, 1108, 1606, 1874, 2401
PspXI VCTCGAGB 1 cut(s) 2638
PstI CTGCAG 1 cut(s) 448
PstNI CAGNNNCTG 1 cut(s) 1988
PsuI RGATCY 4 cut(s) 97, 1543, 2770, 2821
PvuII CAGCTG 1 cut(s) 1856
RseI CAYNNNNRTG 5 cut(s) 1215, 1431, 1821, 2796, 2802
Rsr2I CGGWCCG 1 cut(s) 821
RsrII CGGWCCG 1 cut(s) 821
SapI GCTCTTC 2 cut(s) 1332, 2503
SaqAI TTAA 6 cut(s) 1332, 2156, 2516, 2526, 2616, 2649
Sau96I GGNCC 6 cut(s) 821, 873, 1108, 1606, 1874, 2401
SbfI CCTGCAGG 1 cut(s) 448
SchI GAGTC 2 cut(s) 80, 470
ScrFI CCNGG 6 cut(s) 102, 203, 340, 2759, 2786, 2942
SdaI CCTGCAGG 1 cut(s) 448
SduI GDGCHC 2 cut(s) 1327, 1798
SfaNI GCATC 6 cut(s) 262, 370, 490, 1684, 2209, 2479
SfcI CTRYAG 5 cut(s) 256, 444, 507, 1117, 2817
SfoI GGCGCC 2 cut(s) 78, 127
Sfr274I CTCGAG 2 cut(s) 413, 2638
SinI GGWCC 5 cut(s) 821, 873, 1606, 1874, 2401
SlaI CTCGAG 2 cut(s) 413, 2638
SmiMI CAYNNNNRTG 5 cut(s) 1215, 1431, 1821, 2796, 2802
SphI GCATGC 2 cut(s) 175, 1730
Sse8387I CCTGCAGG 1 cut(s) 448
SsiI CCGC 6 cut(s) 166, 169, 1420, 2024, 2404, 2907
SspDI GGCGCC 2 cut(s) 76, 125
SspI AATATT 4 cut(s) 609, 895, 1096, 1129
SspMI CTAG 6 cut(s) 645, 933, 980, 1275, 2177, 2681
StyD4I CCNGG 6 cut(s) 100, 201, 338, 2757, 2784, 2940
StyI CCWWGG 2 cut(s) 644, 2420
TaaI ACNGT 8 cut(s) 508, 862, 926, 1033, 1121, 2234, 2455, 2892
TaiI ACGT 3 cut(s) 141, 1351, 1982
TatI WGTACW 5 cut(s) 827, 1666, 1819, 1990, 2328
TauI GCSGC 1 cut(s) 171
TfiI GAWTC 7 cut(s) 1439, 1457, 1952, 2242, 2374, 2388, 2441
Tru1I TTAA 6 cut(s) 1332, 2156, 2516, 2526, 2616, 2649
Tru9I TTAA 6 cut(s) 1332, 2156, 2516, 2526, 2616, 2649
TscAI CASTG 6 cut(s) 51, 119, 216, 2043, 2071, 2460
TseFI GTSAC 4 cut(s) 104, 143, 728, 2204
Tsp45I GTSAC 4 cut(s) 104, 143, 728, 2204
TspGWI ACGGA 4 cut(s) 131, 813, 904, 1961
TspRI CASTG 6 cut(s) 51, 119, 216, 2043, 2071, 2460
Van91I CCANNNNNTGG 1 cut(s) 2785
Vha464I CTTAAG 1 cut(s) 2525
VneI GTGCAC 1 cut(s) 1794
VpaK11BI GGWCC 5 cut(s) 821, 873, 1606, 1874, 2401
XapI RAATTY 4 cut(s) 10, 467, 1409, 2835
XceI RCATGY 5 cut(s) 175, 1004, 1730, 2696, 2903
XcmI CCANNNNNNNNNTGG 3 cut(s) 752, 1312, 1839
XhoI CTCGAG 2 cut(s) 413, 2638
XmaJI CCTAGG 1 cut(s) 644
XmiI GTMKAC 2 cut(s) 372, 1487
XspI CTAG 6 cut(s) 645, 933, 980, 1275, 2177, 2681
ZraI GACGTC 1 cut(s) 139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.