Rroxscaffold_5G00367540

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0014038
Physical Location & Seq
Forward (+)
49348682 .. 49354790
6109 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00367540.1

Sequence Viewer

Length: 2427 bp
ATGGCTGCAAATTCACTTCCAATACTATATGCTCTTGTTCTCGCACTGAGCCTGTTCACGTTTCAATCCGAGTCGGCGCCTCAAGCTTTCCGGAGAGATCCAGGTCACCCTCAGTGGCACCACGGCGCCTTCCACGACGTCCGTGACACCGTTCGCTCCGATGTCCGCCGCATGCTCCATTCTCGCGCCGAGGTGCCGTTCCAGGTTCCACTGGAAGTGAATGTGGTGCTTGTTGGTTTCAATGGTGATGGAGGCTATAGGTACTCGGTGGATGCGCACAAATTGGAGGAGCTGCTCAAGATCAGCTTCCCGACGCACCGGCCGGCGTGTCTTGAGACCGGGGAGGCTCTCGATATCGAGCATCAAATTGTCTACAATGCCTTCCCTGCTGGGCAGCCGGAGCTTATAGCTCTAGAGAAGGCTTTGAAAGAGGCGATGGTTCCTGCAGGAAATGCGAGAGAGACTGATTTTGGAAGGGAAGTACCTCTTTTTGAGGTCGATGCAACTGTAGTGGAGCCGGTATTTCAGAGGTTGTATTCCTATATATTTGACACAGACAATTCAGCTGTTTCTGCTATGGAGTTGGATCGCCAAGTGCCAAGTGCAATATTTGTGGTCAATTTTGATAAGGTCAGAATGGATCCTAGGAATAAGGAAATTGATCTTGACAACTTGATGTATGGAAAAATTACTCAACTAACTGATGATGATATGCAAAAACAAGAGGGAGACTATATTTATCGCTATCGGTACAATGGAGGAGGTGCCTCTCAAGTTTGGCTGGGCTATGGCAGATATGTAGTGATTGATCTCTCGGCCGGCCCGTGTACTTATGGAAAGATTGAAACTGAAGAGGGAACTGTCAGTTCTCGGACCCTGCCACGACTACGGAATATAATGTTTCCAGGAGGAATGGGTGCAGCTAGTGATCAATCTACACATGATGTATTTGTTGGACAACTTGCCTCTCTAGTATCCACCACGATTGAGCATGTTATAGCTCCAGATGTTAGATTTGAAACTGTTGATCTGACAACAAGGCTGCTTTTACCAATAATTGTGCTGCAAAATCATAATCGATACAATATTATAGAGAAGGGCCACAACTACAGTATAAATATTGAAGCAATTGAGGAACAGGTGAAGAAAATGGTTCATACTGGGCAAGAAGTTGTGATTGTTGGGGGTTCACATTCATTACATCGCCATGAGAAGTTGGCAATTGCCGTTTCAAAAGCTATGCGAGGCCATTCCCTTCAAGAAACTAGGAATGATGGACGCTTTCATGTTCATACCAAGACATATCTGGATGGTGCTCTTCTTAAAGAAGAGATGGAACGTTCTGCTGATGTGCTTGCTGCTGGTTTGCTTGAGGTGGCTGACCCATCTCTTTCGAGTAAATTTTTCCTCCGCCAGCATTGGAATGATGAATCTGATGGTGCAAGTGATTCTATACTCAAACATAAACCTCTTTGGTCTACTTATGACAAAAAAGGTGGCAAGAAGAAAAAGAAAAAAGAAAGGAAACGGGGAGATCTGTACCGAACTTATGGAACAAGAGTAATTCCTGTCTTTGTGCTATCATTGGCTGATGTGGACCCACACCTTATGATGGAAGACGAAAGTCTTGTATGGACAAGCAAAGATGTCGTGATTGTACTCGAGCATCAAAATCAGCAGATACCTCTTAGTTATGTGTCAGAAACACAGAGAAGGCATGCCGAACCATCTCAGGTACAGCGCCATATATTGGCAGGGCTTGCTTCTGCTGTGGCAGGGTTGAGTGCACCATATGAGAAGGCTTCTCATGTACATGAAAGGCCAGTCGTGAATTGGCTATGGGCAGCTGGGTGTCATCCATTTGGACCATTCTCTAATACTTCTAAAGTCAGCCAAATGCTTCAAGATGTTGCATTGAGGAACTCAATATATGCGCGTGTAGATTCTGCACTCCACAAAATCCGTGATACGTCAGAGGCTGTACAAACATTTGCTGCCGAGTACCTGAAAACTCCGCTTGGTGAGCCAGTGAAGGGCAAGAAGAACAAAACCACCACTGAGCTATGGGTGGAGAAGTTCTACAAGAAGACCACTAACTTGCCTGAACCTTACCCACATGAATTAGTTGATAGATTGGAGAACTTCTTAAATAACCTTGAGGAACAGCTAGTAGATTTGTCTTCATCATTGTATGGTCACCGGCTACAAGATGCACATTTCAATAGTTCTGAGATTCTCCAGAGTTCCATATTTACCCAGCAGTATGTAGATCATGTTTTGTCAAACGAGAGGGAAAAGATGAAATGCTGCAACATTGAGTACAAATATCCTGTGCAGTCATCTCAAACTTATGTCTATGGGGGGATTCTTCTTGCTGGATTCGTTGTATATTTTATAGTCATTTTCTTTTCAAACCCTGTACGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

808

Amino Acids

91.31

Weight (kDa)

6.18

Isoelectric Point (pI)

44.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7906 PF25483 69 - 335 3e-57 Domain of unknown function (DUF7906)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014038)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G16180
fragaria_vesca FvH4_4g19930 FvH4_4g19930
malus_domestica MD16G1152500.v1.1
prunus_persica Prupe.1G115700_v2.0.a1 Prupe.1G115700_v2.0.a1
pyrus_communis pycom16g12970
rosa_chinensis RchiOBHm_Chr4g0425571
rosa_laevigata RLG00000007353
rosa_multiflora Rmu_sc0001900.1_g000001 Rmu_sc0003958.1_g000018
rosa_roxburghii Rroxscaffold_5G00367540
rosa_rugosa Rorug04G0204200
rosa_samantha Rh4AG261100 Rh4BG267000 Rh4CG278200
rosa_wichuraiana Rw4G022610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 141
Acc16I TGCGCA 1 cut(s) 276
AccB1I GGYRCC 5 cut(s) 76, 117, 125, 193, 764
AccB7I CCANNNNNTGG 1 cut(s) 1750
AccI GTMKAC 2 cut(s) 372, 1478
AccII CGCG 2 cut(s) 186, 1936
AccIII TCCGGA 1 cut(s) 90
AciI CCGC 4 cut(s) 166, 169, 1411, 2015
AclI AACGTT 1 cut(s) 1339
AclWI GGATC 4 cut(s) 92, 594, 635, 648
AcoI YGGCCR 2 cut(s) 320, 816
AcsI RAATTY 2 cut(s) 10, 1400
AcuI CTGAAG 1 cut(s) 870
AcyI GRCGYC 3 cut(s) 77, 126, 138
AfiI CCNNNNNNNGG 3 cut(s) 1612, 1750, 2033
AjnI CCWGG 3 cut(s) 100, 201, 904
Alw21I GWGCWC 2 cut(s) 1318, 1789
Alw26I GTCTC 3 cut(s) 329, 455, 723
Alw44I GTGCAC 1 cut(s) 1785
AlwI GGATC 4 cut(s) 92, 594, 635, 648
AlwNI CAGNNNCTG 1 cut(s) 1979
Ama87I CYCGRG 1 cut(s) 1661
Aor13HI TCCGGA 1 cut(s) 90
AoxI GGCC 6 cut(s) 320, 816, 820, 1099, 1246, 1820
ApaLI GTGCAC 1 cut(s) 1785
ApoI RAATTY 2 cut(s) 10, 1400
AspA2I CCTAGG 1 cut(s) 644
AspLEI GCGC 6 cut(s) 79, 128, 188, 277, 1743, 1936
AspS9I GGNCC 5 cut(s) 821, 873, 1099, 1597, 1865
AsuC2I CCSGG 1 cut(s) 340
AsuHPI GGTGA 5 cut(s) 98, 257, 1153, 2033, 2189
AvaI CYCGRG 1 cut(s) 1661
AvaII GGWCC 3 cut(s) 873, 1597, 1865
AvrII CCTAGG 1 cut(s) 644
BaeGI GKGCMC 1 cut(s) 1789
BamHI GGATCC 1 cut(s) 640
BanI GGYRCC 5 cut(s) 76, 117, 125, 193, 764
BbsI GAAGAC 3 cut(s) 1623, 2093, 2172
Bbv12I GWGCWC 2 cut(s) 1318, 1789
BbvI GCAGC 9 cut(s) 279, 406, 932, 1029, 1050, 1345, 1856, 1981, 2294
BccI CCATC 9 cut(s) 242, 430, 1268, 1304, 1327, 1393, 1430, 1606, 1735
BceAI ACGGC 3 cut(s) 139, 181, 1211
BcgI CGANNNNNNTGC 2 cut(s) 1630, 1664
BciT130I CCWGG 3 cut(s) 102, 203, 906
BciVI GTATCC 1 cut(s) 985
BclI TGATCA 1 cut(s) 928
BcnI CCSGG 1 cut(s) 340
BcoDI GTCTC 3 cut(s) 329, 455, 723
BfaI CTAG 6 cut(s) 413, 645, 924, 971, 1266, 2168
BfmI CTRYAG 4 cut(s) 256, 444, 507, 1108
BfoI RGCGCY 3 cut(s) 80, 129, 1744
BfuI GTATCC 1 cut(s) 985
BglII AGATCT 1 cut(s) 1534
BlnI CCTAGG 1 cut(s) 644
Bme1390I CCNGG 4 cut(s) 102, 203, 340, 906
Bme18I GGWCC 3 cut(s) 873, 1597, 1865
BmeT110I CYCGRG 1 cut(s) 1661
BmgT120I GGNCC 5 cut(s) 821, 873, 1099, 1597, 1865
BmrFI CCNGG 4 cut(s) 102, 203, 340, 906
BmrI ACTGGG 1 cut(s) 1170
BmsI GCATC 5 cut(s) 262, 370, 490, 1675, 2200
BmuI ACTGGG 1 cut(s) 1170
BoxI GACNNNNGTC 1 cut(s) 1623
BpiI GAAGAC 3 cut(s) 1623, 2093, 2172
BpmI CTGGAG 2 cut(s) 987, 2222
BpuEI CTTGAG 6 cut(s) 66, 281, 353, 756, 1391, 2177
BpuMI CCSGG 1 cut(s) 340
Bsa29I ATCGAT 1 cut(s) 1078
BsaHI GRCGYC 3 cut(s) 77, 126, 138
BsaI GGTCTC 1 cut(s) 329
BsaJI CCNNGG 4 cut(s) 121, 189, 339, 644
BsaWI WCCGGW 1 cut(s) 90
Bsc4I CCNNNNNNNGG 3 cut(s) 1612, 1750, 2033
Bse118I RCCGGY 5 cut(s) 318, 322, 517, 818, 2199
Bse1I ACTGG 4 cut(s) 216, 1165, 1823, 2027
BseAI TCCGGA 1 cut(s) 90
BseBI CCWGG 3 cut(s) 102, 203, 906
BseCI ATCGAT 1 cut(s) 1078
BseDI CCNNGG 4 cut(s) 121, 189, 339, 644
BseGI GGATG 3 cut(s) 277, 1315, 1855
BseLI CCNNNNNNNGG 3 cut(s) 1612, 1750, 2033
BseMII CTCAG 5 cut(s) 38, 125, 1745, 2049, 2220
BseNI ACTGG 4 cut(s) 216, 1165, 1823, 2027
BseRI GAGGAG 2 cut(s) 302, 774
BseSI GKGCMC 1 cut(s) 1789
BseX3I CGGCCG 2 cut(s) 320, 816
BseXI GCAGC 9 cut(s) 279, 406, 932, 1029, 1050, 1345, 1856, 1981, 2294
BseYI CCCAGC 4 cut(s) 389, 781, 1847, 2256
BsgI GTGCAG 3 cut(s) 939, 1932, 2354
Bsh1236I CGCG 2 cut(s) 186, 1936
Bsh1285I CGRYCG 2 cut(s) 323, 819
BshFI GGCC 6 cut(s) 322, 818, 822, 1101, 1248, 1822
BshNI GGYRCC 5 cut(s) 76, 117, 125, 193, 764
BshVI ATCGAT 1 cut(s) 1078
BsiEI CGRYCG 2 cut(s) 323, 819
BsiHKAI GWGCWC 2 cut(s) 1318, 1789
BsiHKCI CYCGRG 1 cut(s) 1661
BsiSI CCGG 8 cut(s) 91, 319, 323, 339, 398, 518, 819, 2200
BslI CCNNNNNNNGG 3 cut(s) 1612, 1750, 2033
BsmAI GTCTC 3 cut(s) 329, 455, 723
BsnI GGCC 6 cut(s) 322, 818, 822, 1101, 1248, 1822
Bso31I GGTCTC 1 cut(s) 329
BsoBI CYCGRG 1 cut(s) 1661
Bsp1286I GDGCHC 2 cut(s) 1318, 1789
Bsp13I TCCGGA 1 cut(s) 90
Bsp1407I TGTACA 2 cut(s) 1810, 1981
BspACI CCGC 4 cut(s) 166, 169, 1411, 2015
BspANI GGCC 6 cut(s) 322, 818, 822, 1101, 1248, 1822
BspCNI CTCAG 5 cut(s) 39, 124, 1744, 2050, 2221
BspDI ATCGAT 1 cut(s) 1078
BspEI TCCGGA 1 cut(s) 90
BspFNI CGCG 2 cut(s) 186, 1936
BspMAI CTGCAG 1 cut(s) 448
BspPI GGATC 4 cut(s) 92, 594, 635, 648
BspQI GCTCTTC 1 cut(s) 1323
BspT107I GGYRCC 5 cut(s) 76, 117, 125, 193, 764
BspTNI GGTCTC 1 cut(s) 329
BsrFI RCCGGY 5 cut(s) 318, 322, 517, 818, 2199
BsrGI TGTACA 2 cut(s) 1810, 1981
BsrI ACTGG 4 cut(s) 216, 1165, 1823, 2027
BssAI RCCGGY 5 cut(s) 318, 322, 517, 818, 2199
BssECI CCNNGG 4 cut(s) 121, 189, 339, 644
BssNI GRCGYC 3 cut(s) 77, 126, 138
BssT1I CCWWGG 1 cut(s) 644
Bst2UI CCWGG 3 cut(s) 102, 203, 906
Bst4CI ACNGT 5 cut(s) 151, 508, 862, 1024, 1112
Bst6I CTCTTC 3 cut(s) 846, 1323, 1323
BstACI GRCGYC 3 cut(s) 77, 126, 138
BstAPI GCANNNNNTGC 2 cut(s) 452, 1760
BstAUI TGTACA 2 cut(s) 1810, 1981
BstC8I GCNNGC 7 cut(s) 173, 324, 820, 1356, 1415, 1719, 1761
BstDEI CTNAG 6 cut(s) 47, 111, 1688, 1731, 2058, 2229
BstDSI CCRYGG 1 cut(s) 121
BstEII GGTNACC 2 cut(s) 104, 2195
BstF5I GGATG 3 cut(s) 277, 1315, 1855
BstFNI CGCG 2 cut(s) 186, 1936
BstH2I RGCGCY 3 cut(s) 80, 129, 1744
BstHHI GCGC 6 cut(s) 79, 128, 188, 277, 1743, 1936
BstMAI GTCTC 3 cut(s) 329, 455, 723
BstMCI CGRYCG 2 cut(s) 323, 819
BstMWI GCNNNNNNNGC 7 cut(s) 83, 386, 400, 452, 572, 1760, 2023
BstNI CCWGG 3 cut(s) 102, 203, 906
BstNSI RCATGY 3 cut(s) 175, 995, 1721
BstPAI GACNNNNGTC 1 cut(s) 1623
BstPI GGTNACC 2 cut(s) 104, 2195
BstSCI CCNGG 4 cut(s) 100, 201, 338, 904
BstSFI CTRYAG 4 cut(s) 256, 444, 507, 1108
BstSLI GKGCMC 1 cut(s) 1789
BstUI CGCG 2 cut(s) 186, 1936
BstV1I GCAGC 9 cut(s) 279, 406, 932, 1029, 1050, 1345, 1856, 1981, 2294
BstV2I GAAGAC 3 cut(s) 1623, 2093, 2172
BstX2I RGATCY 3 cut(s) 97, 640, 1534
BstYI RGATCY 3 cut(s) 97, 640, 1534
BstZI CGGCCG 2 cut(s) 320, 816
Bsu15I ATCGAT 1 cut(s) 1078
BsuI GTATCC 1 cut(s) 985
BsuRI GGCC 6 cut(s) 322, 818, 822, 1101, 1248, 1822
BsuTUI ATCGAT 1 cut(s) 1078
BtgI CCRYGG 1 cut(s) 121
BtgZI GCGATG 2 cut(s) 449, 1187
BtsCI GGATG 3 cut(s) 277, 1315, 1855
BtsIMutI CAGTG 5 cut(s) 44, 119, 209, 2034, 2055
Cac8I GCNNGC 7 cut(s) 173, 324, 820, 1356, 1415, 1719, 1761
CaiI CAGNNNCTG 1 cut(s) 1979
CfoI GCGC 6 cut(s) 79, 128, 188, 277, 1743, 1936
Cfr10I RCCGGY 5 cut(s) 318, 322, 517, 818, 2199
Cfr13I GGNCC 5 cut(s) 821, 873, 1099, 1597, 1865
ClaI ATCGAT 1 cut(s) 1078
CseI GACGC 2 cut(s) 322, 1287
CspCI CAANNNNNGTGG 8 cut(s) 492, 527, 594, 629, 967, 1002, 1477, 1512
DdeI CTNAG 6 cut(s) 47, 111, 1688, 1731, 2058, 2229
DinI GGCGCC 2 cut(s) 78, 127
EaeI YGGCCR 2 cut(s) 320, 816
EagI CGGCCG 2 cut(s) 320, 816
Eam1104I CTCTTC 3 cut(s) 846, 1323, 1323
EarI CTCTTC 3 cut(s) 846, 1323, 1323
EciI GGCGGA 2 cut(s) 155, 1400
EclXI CGGCCG 2 cut(s) 320, 816
Eco130I CCWWGG 1 cut(s) 644
Eco31I GGTCTC 1 cut(s) 329
Eco32I GATATC 1 cut(s) 355
Eco47I GGWCC 3 cut(s) 873, 1597, 1865
Eco52I CGGCCG 2 cut(s) 320, 816
Eco57I CTGAAG 1 cut(s) 870
Eco88I CYCGRG 1 cut(s) 1661
Eco91I GGTNACC 2 cut(s) 104, 2195
EcoO65I GGTNACC 2 cut(s) 104, 2195
EcoRII CCWGG 3 cut(s) 100, 201, 904
EcoRV GATATC 1 cut(s) 355
EcoT14I CCWWGG 1 cut(s) 644
EgeI GGCGCC 2 cut(s) 78, 127
EheI GGCGCC 2 cut(s) 78, 127
ErhI CCWWGG 1 cut(s) 644
FalI AAGNNNNNCTT 4 cut(s) 290, 322, 471, 503
FauNDI CATATG 1 cut(s) 1792
FbaI TGATCA 1 cut(s) 928
FblI GTMKAC 2 cut(s) 372, 1478
FokI GGATG 3 cut(s) 284, 1322, 1842
FseI GGCCGGCC 1 cut(s) 822
FspAI RTGCGCAY 1 cut(s) 276
FspBI CTAG 6 cut(s) 413, 645, 924, 971, 1266, 2168
FspI TGCGCA 1 cut(s) 276
GlaI GCGC 6 cut(s) 78, 127, 187, 276, 1742, 1935
GsaI CCCAGC 4 cut(s) 393, 785, 1851, 2260
GsuI CTGGAG 2 cut(s) 987, 2222
HaeII RGCGCY 3 cut(s) 80, 129, 1744
HaeIII GGCC 6 cut(s) 322, 818, 822, 1101, 1248, 1822
HapII CCGG 8 cut(s) 91, 319, 323, 339, 398, 518, 819, 2200
HgaI GACGC 2 cut(s) 322, 1287
HhaI GCGC 6 cut(s) 79, 128, 188, 277, 1743, 1936
Hin1I GRCGYC 3 cut(s) 77, 126, 138
Hin6I GCGC 6 cut(s) 77, 126, 186, 275, 1741, 1934
HinP1I GCGC 6 cut(s) 77, 126, 186, 275, 1741, 1934
HindIII AAGCTT 1 cut(s) 84
HinfI GANTC 7 cut(s) 71, 1430, 1448, 1943, 2233, 2365, 2379
HpaII CCGG 8 cut(s) 91, 319, 323, 339, 398, 518, 819, 2200
HphI GGTGA 5 cut(s) 98, 257, 1153, 2033, 2189
Hpy166II GTNNAC 7 cut(s) 57, 373, 828, 1190, 1479, 1597, 1787
Hpy8I GTNNAC 7 cut(s) 57, 373, 828, 1190, 1479, 1597, 1787
Hpy99I CGWCG 2 cut(s) 140, 316
HpyAV CCTTC 9 cut(s) 139, 391, 412, 468, 1090, 1265, 1707, 1792, 2026
HpyCH4III ACNGT 5 cut(s) 151, 508, 862, 1024, 1112
HpyCH4IV ACGT 4 cut(s) 59, 138, 1339, 1970
HpyF10VI GCNNNNNNNGC 7 cut(s) 83, 386, 400, 452, 572, 1760, 2023
HpyF3I CTNAG 6 cut(s) 47, 111, 1688, 1731, 2058, 2229
HpySE526I ACGT 4 cut(s) 59, 138, 1339, 1970
Hsp92I GRCGYC 3 cut(s) 77, 126, 138
HspAI GCGC 6 cut(s) 77, 126, 186, 275, 1741, 1934
KasI GGCGCC 2 cut(s) 76, 125
Kpn2I TCCGGA 1 cut(s) 90
KroI GCCGGC 2 cut(s) 322, 818
KroNI GCCGGC 2 cut(s) 324, 820
Ksp22I TGATCA 1 cut(s) 928
LguI GCTCTTC 1 cut(s) 1323
LmnI GCTCC 6 cut(s) 161, 180, 289, 400, 514, 1006
Lsp1109I GCAGC 9 cut(s) 279, 406, 932, 1029, 1050, 1345, 1856, 1981, 2294
LweI GCATC 5 cut(s) 262, 370, 490, 1675, 2200
MaeI CTAG 6 cut(s) 413, 645, 924, 971, 1266, 2168
MaeII ACGT 4 cut(s) 59, 138, 1339, 1970
MaeIII GTNAC 3 cut(s) 104, 143, 2195
MfeI CAATTG 2 cut(s) 1128, 1221
MflI RGATCY 3 cut(s) 97, 640, 1534
MhlI GDGCHC 2 cut(s) 1318, 1789
Mly113I GGCGCC 2 cut(s) 77, 126
MlyI GAGTC 1 cut(s) 80
MmeI TCCRAC 2 cut(s) 564, 934
MroI TCCGGA 1 cut(s) 90
MroNI GCCGGC 2 cut(s) 322, 818
MseI TTAA 2 cut(s) 1323, 2147
MslI CAYNNNNRTG 3 cut(s) 1206, 1422, 1812
MspA1I CMGCKG 2 cut(s) 566, 1847
MspI CCGG 8 cut(s) 91, 319, 323, 339, 398, 518, 819, 2200
MspR9I CCNGG 4 cut(s) 102, 203, 340, 906
MunI CAATTG 2 cut(s) 1128, 1221
MvaI CCWGG 3 cut(s) 102, 203, 906
MvnI CGCG 2 cut(s) 186, 1936
MwoI GCNNNNNNNGC 7 cut(s) 83, 386, 400, 452, 572, 1760, 2023
NaeI GCCGGC 2 cut(s) 324, 820
NarI GGCGCC 2 cut(s) 77, 126
NciI CCSGG 1 cut(s) 340
NdeI CATATG 1 cut(s) 1792
NgoMIV GCCGGC 2 cut(s) 322, 818
NmeAIII GCCGAG 3 cut(s) 214, 794, 2023
NmuCI GTSAC 3 cut(s) 104, 143, 2195
NsbI TGCGCA 1 cut(s) 276
NspI RCATGY 3 cut(s) 175, 995, 1721
PaeI GCATGC 2 cut(s) 175, 1721
PaeR7I CTCGAG 1 cut(s) 1661
PciSI GCTCTTC 1 cut(s) 1323
PcsI WCGNNNNNNNCGW 1 cut(s) 821
PdiI GCCGGC 2 cut(s) 324, 820
PfeI GAWTC 6 cut(s) 1430, 1448, 1943, 2233, 2365, 2379
PflMI CCANNNNNTGG 1 cut(s) 1750
PfoI TCCNGGA 1 cut(s) 904
PleI GAGTC 1 cut(s) 79
PluTI GGCGCC 2 cut(s) 80, 129
PpsI GAGTC 1 cut(s) 79
PshAI GACNNNNGTC 1 cut(s) 1623
Psp1406I AACGTT 1 cut(s) 1339
Psp6I CCWGG 3 cut(s) 100, 201, 904
PspEI GGTNACC 2 cut(s) 104, 2195
PspFI CCCAGC 4 cut(s) 389, 781, 1847, 2256
PspGI CCWGG 3 cut(s) 100, 201, 904
PspPI GGNCC 5 cut(s) 821, 873, 1099, 1597, 1865
PspXI VCTCGAGB 1 cut(s) 1661
PstI CTGCAG 1 cut(s) 448
PstNI CAGNNNCTG 1 cut(s) 1979
PsuI RGATCY 3 cut(s) 97, 640, 1534
PvuII CAGCTG 2 cut(s) 566, 1847
RigI GGCCGGCC 1 cut(s) 822
RseI CAYNNNNRTG 3 cut(s) 1206, 1422, 1812
SapI GCTCTTC 1 cut(s) 1323
SaqAI TTAA 2 cut(s) 1323, 2147
Sau96I GGNCC 5 cut(s) 821, 873, 1099, 1597, 1865
SbfI CCTGCAGG 1 cut(s) 448
SchI GAGTC 1 cut(s) 80
ScrFI CCNGG 4 cut(s) 102, 203, 340, 906
SdaI CCTGCAGG 1 cut(s) 448
SduI GDGCHC 2 cut(s) 1318, 1789
SfaNI GCATC 5 cut(s) 262, 370, 490, 1675, 2200
SfcI CTRYAG 4 cut(s) 256, 444, 507, 1108
SfoI GGCGCC 2 cut(s) 78, 127
Sfr274I CTCGAG 1 cut(s) 1661
SinI GGWCC 3 cut(s) 873, 1597, 1865
SlaI CTCGAG 1 cut(s) 1661
SmiMI CAYNNNNRTG 3 cut(s) 1206, 1422, 1812
SmlI CTYRAG 7 cut(s) 81, 296, 332, 771, 1370, 1661, 2156
SmoI CTYRAG 7 cut(s) 81, 296, 332, 771, 1370, 1661, 2156
SphI GCATGC 2 cut(s) 175, 1721
Sse8387I CCTGCAGG 1 cut(s) 448
SsiI CCGC 4 cut(s) 166, 169, 1411, 2015
SspDI GGCGCC 2 cut(s) 76, 125
SspI AATATT 3 cut(s) 609, 1087, 1120
SspMI CTAG 6 cut(s) 413, 645, 924, 971, 1266, 2168
StyD4I CCNGG 4 cut(s) 100, 201, 338, 904
StyI CCWWGG 1 cut(s) 644
TaaI ACNGT 5 cut(s) 151, 508, 862, 1024, 1112
TaiI ACGT 4 cut(s) 62, 141, 1342, 1973
TaqI TCGA 6 cut(s) 351, 357, 498, 1078, 1394, 1662
TatI WGTACW 5 cut(s) 827, 1657, 1810, 1981, 2319
TauI GCSGC 1 cut(s) 171
TfiI GAWTC 6 cut(s) 1430, 1448, 1943, 2233, 2365, 2379
Tru1I TTAA 2 cut(s) 1323, 2147
Tru9I TTAA 2 cut(s) 1323, 2147
TscAI CASTG 5 cut(s) 51, 119, 216, 2034, 2062
TseFI GTSAC 3 cut(s) 104, 143, 2195
Tsp45I GTSAC 3 cut(s) 104, 143, 2195
TspDTI ATGAA 9 cut(s) 1145, 1185, 1274, 1280, 1443, 1830, 2133, 2172, 2315
TspGWI ACGGA 3 cut(s) 131, 904, 1952
TspRI CASTG 5 cut(s) 51, 119, 216, 2034, 2062
Van91I CCANNNNNTGG 1 cut(s) 1750
VneI GTGCAC 1 cut(s) 1785
VpaK11BI GGWCC 3 cut(s) 873, 1597, 1865
XapI RAATTY 2 cut(s) 10, 1400
XbaI TCTAGA 1 cut(s) 412
XceI RCATGY 3 cut(s) 175, 995, 1721
XcmI CCANNNNNNNNNTGG 2 cut(s) 1303, 1830
XhoI CTCGAG 1 cut(s) 1661
XmaJI CCTAGG 1 cut(s) 644
XmiI GTMKAC 2 cut(s) 372, 1478
XspI CTAG 6 cut(s) 413, 645, 924, 971, 1266, 2168
ZraI GACGTC 1 cut(s) 139
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.