Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0008558

Physical Location & Seq

Genomic Coordinates Forward (+)

23893709 .. 23905060

Gene Structure 11352 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g20760.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3162 bp

ATGTTCTTCTCCGGCGATTCGTCGAATCGGAAGCGGGTGGATTTGGGGGGACGGAGTACGAAGGAGAGGGATAGGCAGAAGCTTCTGGAGCAAACGAGGTTGGAGCGCAACCGGAGGTTGTGGTTGCGGCAGCAGAACTCCGCCGCTACTAAGATTCAGAAATGCTTCAGAGGGAGAAAGGTAGCAAGACTTGAATATTCTAAGGTGCGGGAACAGTTTTATGGAACATACGGGGAACACTTCCAGAATGCAGACAAATCGTGTTTTGGTCCAGACTCGGACTTTCTCCGCCAGTTGCTTTTTTTCTTTGATGCTCGAAGTGTTGGCGACTTCACCGTCCTTGTGGAAACATGCCGGTTACTCCAAAAATTTGTCAGAGATACAGGGGATATTGTGAGCCTATTTGCAGGCATGGACTATTCATCGAAGCAGGCTTTGGTTAATTACAGAGTAAAAAAACTTACGTATCTGTGTATCAAGGCTGTTCATCAAAATAGAAATCAAATGAAGGATCAACTTTTTGCATCTCCCAAGGAGTCCACTGTGTCGACAACTTTATTGTTGGAAACAGTAGTCTTGTTGACCAATCATAAGCTTCCATGGGTCTGTAGGACAGTAAACTATCTTCTTGAAAGAAAGGCATTTACCCTGTTTAGAGAGATTATTTTAACTGGAAGGGCGAGTATAGAGAATCATGATTCGGTTGGCAGAGTATCTTCATTGGAGCGCACTCTTGCTGTTGTAATTTCTCACATTGGTCAGGAGCCATGTAACTGCTCAAATGTTGGTGCACACTGGAGTTTTTCGTCTCAGATTCTTACAATTCCTTTCTTGTGGCGGCTGCTCCCGCACTTAAAAGAGGTTTTCTCAGAACGTGGGTTGAGCCAACATTATATTCATCAGATGGCACTCTGTGTTCATAATCATGCTGATGTGCTCCCCAATGATACATCAGTTGAGTTACCCAGTTATGCCTGCCTTTTGGGAAATATACTAGAATCTTCTGGAGTTGCTCTATCTCAGCCTGACCGCTCATTTGAACTGGCTGTAGACCTTGCTGCTGTTGCAACATTCTTGTTGGAATCACTTCCTTCTATAAAATCGCTAAATAGACGAAGCAAAGAAGGTATTCCTTTTTCGCATATATGCTGTACTAGGCTCCACTTTCCATATGTTTCAGATTCCATGGTGGGTGAGGATGATATGACTGAGGGAGATGATGCAATGGAAATATGTTTGAATAATGATTTGGAACGACAGATTTGTGAGGCCATAGATTCACGCTTTCTCCTGCAATTTACAAATGTTTTGTTCGGAGGAATTTCAGCTGTCAGTGATCCACACAAAGCACCGGATGATAAAGAGATCTCAGCTGTTGGTGCAGCGTGTGCCTTTCTACATGTCACTTTCAACACCTTACCTCTTGAGAGAATCATGACCATCCTAGCTTATAGAACTGAACTTGTCCCTGTTCTATGGAACTTTATGAAACGGTGCAATGAGAACCAGAAATGGTCTTCATTGTCTGAGCAATTGGCATATTTACTGTCAGGAGATGCACCTGGTTGGCTATTACCTTTGGCAGTTTTCTGTCCCGTGTACAAGCACATGCTTACAATAGTCGATAATGAGGAGTTCTATGAACAGGAGAAGCCCCTATCGTTGAAGGATATCAGATCCCTAATTATCATACTCAGACAGGCTCTGTGGCAGCTTCTCTGGGTGAACCCTACGGCTTCCAGTAACTTTTCAAAATCTGTCACCAGCACCCCTGCTAATAAGAAGCACCCTGTGGAGTTCATTCAACAGAGGGTTGGCATCGTAGCATCTGAACTCCTATCCCAGTTGCAAGATTGGAACAACAGACGAGAGTTTACATCCCCCAGTGACTTTCATGCTGATGGTGTCAATGATTTCTTCATTTCGCAGGCCGTGATTGAAAATACCCGAGCCCATGACATTTTGAAGCAAGCTCCGTTCCTAGTACCGTTCACAAGCAGAGTTAAAATATTCACTTCTCAATTGACAGCAGCTAGACAAAGACACGAGTCTCATTCTGTGTTTACCAGAAACCGGTTCAGAATTCGGCGGGACCGTATCTTGGAAGATGCTTATAATCAGATGAGTGCATTGTCTGAAGAAGATCTTCGAGGACCGATTCGGGTAACATTTGTAAACGAATTTGGGGTTGAAGAAGCTGGAATTGATGGTGGTGGGATTTTTAAAGATTTCATGGAGAACATTACTCGAGCAGCCTTTGATGTCCAGTATGGTTTATTTAAGGAAACATCCGACCATCTTCTCTACCCTAATCCTGGTTCAGGAATGATTCATGATCAGCATCTCCAATTTTTCCACTTTCTGGGAATTCTTCTTGCAAAGGCCTTGTTTGAGGGAATTCTTGTTGATATTCCATTTGCAACGTTCTTCCTGAGCAAATTAAAGCAGAAGTACAACTACTTAAATGATTTACCTTCATTAGACCCAGAATTGTATCGCCACCTTATTTTCTTGAAGCATTTCAAAGGTGTTATTTCAGAACTAGAACTATATTTTGTGATTGTAAATAACGAGTATGGGGAGCAAACCGAGGAAGAGCTGCTTCCAGGGGGGAAGAATCTTCGTGTCACTAATGAAAATGTCATTACTTTCATTCATCTCGTTGCCAATCACCGTTTAAATTATCAGATACGTCAACAAAGTTCTCATTTCTTAAGGGGGTTTCAGCAGCTTGTACAGAAAGATTGGATCGATATGTTTAATGAGCATGAACTTCAGCTTCTGATATCAGGCTCACTTGACAGCCTGGATATTGATGATCTACGGAGAAACACCAATTATGTTGGTGGCTATCACAGTGAGCATTACGTCGTCGACATGTTCTGGGAAGTTCTCAAAAGCTTTTCACTGGAAAATCAGAAGAAATTTTTGAAATTTGTGACTGGGTGCTCTCGAGGACCATTGCTTGGATTCAAGTACCTTGAACCACTGTTTTGCATCCAGAGAGCTGCTGGTAGTGCAACTGATGAAGCTCTTGACCGATTGCCAACTGCGGCTACATGTATGAATCTTCTGAAGCTTCCACCATACCGGAGCAAAGAGCAATTAGAAACGAAGTTGATGTACGCAATAAGTTCAGAAGCCGGTTTTGATCTGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

HECT

Protein Analysis

1054

Amino Acids

120.6

Weight (kDa)

6.51

Isoelectric Point (pI)

42.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HECT	PF00632	748 - 1053	3.4e-93	HECT-domain (ubiquitin-transferase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008558)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17205 AT3G17205 AT3G17205
fragaria_vesca	FvH4_4g20760 FvH4_4g20760 FvH4_4g20760 FvH4_4g20760
malus_domestica	MD13G1148100.v1.1 MD16G1148200.v1.1
prunus_persica	Prupe.1G111600_v2.0.a1 Prupe.1G111600_v2.0.a1
pyrus_communis	pycom13g12750 pycom16g12650
rosa_chinensis	RchiOBHm_Chr4g0426201
rosa_laevigata	RLG00000007311
rosa_multiflora	Rmu_sc0000730.1_g000025
rosa_roxburghii	Rroxscaffold_5G00368220
rosa_rugosa	Rorug04G0209500
rosa_samantha	Rh4AG266300 Rh4BG272400 Rh4CG285600 Rh4DG268700
rosa_wichuraiana	Rw4G023030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2115
AasI	GACNNNNNNGTC	1 cut(s)	335
AccB7I	CCANNNNNTGG	2 cut(s)	2362, 2966
AccBSI	CCGCTC	1 cut(s)	1032
AccI	GTMKAC	3 cut(s)	548, 1050, 2874
AclI	AACGTT	1 cut(s)	2423
AclWI	GGATC	4 cut(s)	519, 1331, 1671, 2756
AcsI	RAATTY	8 cut(s)	368, 1320, 2082, 2180, 2367, 2397, 2924, 2933
AcuI	CTGAAG	4 cut(s)	151, 2157, 2759, 3095
AdeI	CACNNNGTG	2 cut(s)	914, 1792
AfaI	GTAC	8 cut(s)	58, 1153, 1601, 1986, 2453, 2736, 2978, 3125
AfiI	CCNNNNNNNGG	6 cut(s)	2073, 2101, 2315, 2321, 2362, 2966
AflII	CTTAAG	1 cut(s)	2713
AflIII	ACRYGT	3 cut(s)	1399, 2877, 3059
AgeI	ACCGGT	1 cut(s)	2073
AjnI	CCWGG	4 cut(s)	1561, 2314, 2605, 2805
AjuI	GAANNNNNNNTTGG	6 cut(s)	419, 451, 879, 911, 1232, 1264
Alw21I	GWGCWC	3 cut(s)	793, 939, 2951
Alw26I	GTCTC	2 cut(s)	813, 2055
Alw44I	GTGCAC	1 cut(s)	789
AlwI	GGATC	4 cut(s)	519, 1331, 1671, 2756
AlwNI	CAGNNNCTG	2 cut(s)	1705, 2782
Ama87I	CYCGRG	3 cut(s)	1947, 2247, 2952
AoxI	GGCC	3 cut(s)	1269, 1929, 2382
ApaLI	GTGCAC	1 cut(s)	789
ApoI	RAATTY	8 cut(s)	368, 1320, 2082, 2180, 2367, 2397, 2924, 2933
ArsI	GACNNNNNNTTYG	2 cut(s)	1019, 1051
AsiGI	ACCGGT	1 cut(s)	2073
Asp700I	GAANNNNTTC	5 cut(s)	164, 1086, 1128, 2145, 2519
AspLEI	GCGC	2 cut(s)	108, 729
AspS9I	GGNCC	4 cut(s)	269, 2092, 2153, 2957
AsuHPI	GGTGA	5 cut(s)	325, 1205, 1735, 1753, 2663
AvaI	CYCGRG	3 cut(s)	1947, 2247, 2952
AvaII	GGWCC	4 cut(s)	269, 2092, 2153, 2957
BaeGI	GKGCMC	1 cut(s)	793
BaeI	ACNNNNGTAYC	4 cut(s)	449, 482, 939, 972
BanII	GRGCYC	1 cut(s)	1954
BarI	GAAGNNNNNNTAC	6 cut(s)	609, 641, 2441, 2473, 3107, 3139
BauI	CACGAG	1 cut(s)	2045
BbsI	GAAGAC	1 cut(s)	1509
Bbv12I	GWGCWC	3 cut(s)	793, 939, 2951
BccI	CCATC	5 cut(s)	898, 1448, 1895, 2201, 2304
BceAI	ACGGC	2 cut(s)	1749, 1916
BcgI	CGANNNNNNTGC	2 cut(s)	240, 274
BciT130I	CCWGG	4 cut(s)	1563, 2316, 2607, 2807
BclI	TGATCA	1 cut(s)	2335
BcoDI	GTCTC	2 cut(s)	813, 2055
BfaI	CTAG	6 cut(s)	995, 1155, 1445, 1982, 2034, 2543
BfmI	CTRYAG	2 cut(s)	607, 1047
BfrI	CTTAAG	1 cut(s)	2713
BglII	AGATCT	2 cut(s)	1365, 2143
Bme1390I	CCNGG	4 cut(s)	1563, 2316, 2607, 2807
Bme18I	GGWCC	4 cut(s)	269, 2092, 2153, 2957
BmeT110I	CYCGRG	3 cut(s)	1947, 2247, 2952
BmgT120I	GGNCC	4 cut(s)	269, 2092, 2153, 2957
BmiI	GGNNCC	3 cut(s)	765, 1160, 2093
BmrFI	CCNGG	4 cut(s)	1563, 2316, 2607, 2807
BmrI	ACTGGG	4 cut(s)	960, 1837, 1878, 2952
BmsI	GCATC	9 cut(s)	301, 533, 1210, 1546, 1827, 1835, 2098, 2350, 3006
BmuI	ACTGGG	4 cut(s)	960, 1837, 1878, 2952
BoxI	GACNNNNGTC	1 cut(s)	2047
BpiI	GAAGAC	1 cut(s)	1509
BplI	GAGNNNNNCTC	2 cut(s)	851, 883
BpmI	CTGGAG	3 cut(s)	107, 817, 1026
Bpu10I	CCTNAGC	1 cut(s)	2432
BpuEI	CTTGAG	1 cut(s)	1445
Bsa29I	ATCGAT	1 cut(s)	2751
BsaAI	YACGTR	1 cut(s)	465
BsaBI	GATNNNNATC	1 cut(s)	2340
BsaJI	CCNNGG	5 cut(s)	531, 599, 1185, 2589, 2606
BsaWI	WCCGGW	4 cut(s)	111, 1351, 2073, 3090
BsaXI	ACNNNNNCTCC	2 cut(s)	1272, 1302
Bsc4I	CCNNNNNNNGG	6 cut(s)	2073, 2101, 2315, 2321, 2362, 2966
Bse118I	RCCGGY	3 cut(s)	354, 2073, 3143
Bse3DI	GCAATG	3 cut(s)	1230, 1504, 2960
Bse8I	GATNNNNATC	1 cut(s)	2340
BseBI	CCWGG	4 cut(s)	1563, 2316, 2607, 2807
BseCI	ATCGAT	1 cut(s)	2751
BseDI	CCNNGG	5 cut(s)	531, 599, 1185, 2589, 2606
BseGI	GGATG	6 cut(s)	1204, 1360, 1440, 1877, 2288, 2997
BseJI	GATNNNNATC	1 cut(s)	2340
BseLI	CCNNNNNNNGG	6 cut(s)	2073, 2101, 2315, 2321, 2362, 2966
BseMI	GCAATG	3 cut(s)	1230, 1504, 2960
BseMII	CTCAG	9 cut(s)	824, 882, 1034, 1200, 1383, 1518, 1708, 2423, 3146
BseRI	GAGGAG	1 cut(s)	1646
BseSI	GKGCMC	1 cut(s)	793
BsgI	GTGCAG	1 cut(s)	1401
BshFI	GGCC	3 cut(s)	1271, 1931, 2384
BshTI	ACCGGT	1 cut(s)	2073
BshVI	ATCGAT	1 cut(s)	2751
BsiHKAI	GWGCWC	3 cut(s)	793, 939, 2951
BsiHKCI	CYCGRG	3 cut(s)	1947, 2247, 2952
BsiSI	CCGG	7 cut(s)	12, 112, 355, 1352, 2074, 3091, 3144
BslFI	GGGAC	4 cut(s)	63, 1451, 1578, 2105
BslI	CCNNNNNNNGG	6 cut(s)	2073, 2101, 2315, 2321, 2362, 2966
BsmAI	GTCTC	2 cut(s)	813, 2055
BsmBI	CGTCTC	1 cut(s)	813
BsmFI	GGGAC	4 cut(s)	63, 1451, 1578, 2105
BsmI	GAATGC	1 cut(s)	253
BsnI	GGCC	3 cut(s)	1271, 1931, 2384
BsoBI	CYCGRG	3 cut(s)	1947, 2247, 2952
Bsp1286I	GDGCHC	4 cut(s)	793, 939, 1954, 2951
Bsp1407I	TGTACA	2 cut(s)	1599, 2734
Bsp143I	GATC	9 cut(s)	511, 1336, 1365, 1676, 2143, 2335, 2748, 2818, 3151
Bsp19I	CCATGG	2 cut(s)	599, 1185
BspANI	GGCC	3 cut(s)	1271, 1931, 2384
BspCNI	CTCAG	9 cut(s)	823, 881, 1033, 1201, 1382, 1519, 1707, 2424, 3147
BspDI	ATCGAT	1 cut(s)	2751
BspHI	TCATGA	3 cut(s)	694, 1434, 2332
BspLI	GGNNCC	3 cut(s)	765, 1160, 2093
BspPI	GGATC	4 cut(s)	519, 1331, 1671, 2756
BspQI	GCTCTTC	1 cut(s)	2589
BspTI	CTTAAG	1 cut(s)	2713
BsrBI	CCGCTC	1 cut(s)	1032
BsrDI	GCAATG	3 cut(s)	1230, 1504, 2960
BsrFI	RCCGGY	3 cut(s)	354, 2073, 3143
BsrGI	TGTACA	2 cut(s)	1599, 2734
BssAI	RCCGGY	3 cut(s)	354, 2073, 3143
BssECI	CCNNGG	5 cut(s)	531, 599, 1185, 2589, 2606
BssMI	GATC	9 cut(s)	511, 1336, 1365, 1676, 2143, 2335, 2748, 2818, 3151
BssSI	CACGAG	1 cut(s)	2045
BssT1I	CCWWGG	3 cut(s)	531, 599, 1185
Bst2BI	CACGAG	1 cut(s)	2045
Bst2UI	CCWGG	4 cut(s)	1563, 2316, 2607, 2807
Bst6I	CTCTTC	1 cut(s)	2589
BstAFI	CTTAAG	1 cut(s)	2713
BstAPI	GCANNNNNTGC	1 cut(s)	1388
BstAUI	TGTACA	2 cut(s)	1599, 2734
BstBAI	YACGTR	1 cut(s)	465
BstC8I	GCNNGC	5 cut(s)	409, 432, 976, 1929, 1971
BstDSI	CCRYGG	2 cut(s)	599, 1185
BstENI	CCTNNNNNAGG	1 cut(s)	2319
BstF5I	GGATG	6 cut(s)	1204, 1360, 1440, 1877, 2288, 2997
BstHHI	GCGC	2 cut(s)	108, 729
BstKTI	GATC	9 cut(s)	514, 1339, 1368, 1679, 2146, 2338, 2751, 2821, 3154
BstMAI	GTCTC	2 cut(s)	813, 2055
BstMBI	GATC	9 cut(s)	511, 1336, 1365, 1676, 2143, 2335, 2748, 2818, 3151
BstMWI	GCNNNNNNNGC	6 cut(s)	88, 847, 1064, 1379, 1388, 3017
BstNI	CCWGG	4 cut(s)	1563, 2316, 2607, 2807
BstNSI	RCATGY	5 cut(s)	354, 1403, 1612, 2881, 3063
BstPAI	GACNNNNGTC	1 cut(s)	2047
BstSCI	CCNGG	4 cut(s)	1561, 2314, 2605, 2805
BstSFI	CTRYAG	2 cut(s)	607, 1047
BstSLI	GKGCMC	1 cut(s)	793
BstSNI	TACGTA	1 cut(s)	465
BstV2I	GAAGAC	1 cut(s)	1509
BstX2I	RGATCY	3 cut(s)	1365, 1676, 2143
BstYI	RGATCY	3 cut(s)	1365, 1676, 2143
Bsu15I	ATCGAT	1 cut(s)	2751
BsuRI	GGCC	3 cut(s)	1271, 1931, 2384
BsuTUI	ATCGAT	1 cut(s)	2751
BtgI	CCRYGG	2 cut(s)	599, 1185
BtsCI	GGATG	6 cut(s)	1204, 1360, 1440, 1877, 2288, 2997
BtsIMutI	CAGTG	7 cut(s)	540, 793, 1339, 1891, 2863, 2906, 2987
Cac8I	GCNNGC	5 cut(s)	409, 432, 976, 1929, 1971
CaiI	CAGNNNCTG	2 cut(s)	1705, 2782
CciI	TCATGA	3 cut(s)	694, 1434, 2332
CfoI	GCGC	2 cut(s)	108, 729
Cfr10I	RCCGGY	3 cut(s)	354, 2073, 3143
Cfr13I	GGNCC	4 cut(s)	269, 2092, 2153, 2957
ClaI	ATCGAT	1 cut(s)	2751
CsiI	ACCWGGT	1 cut(s)	1561
Csp6I	GTAC	8 cut(s)	57, 1152, 1600, 1985, 2452, 2735, 2977, 3124
CspAI	ACCGGT	1 cut(s)	2073
CviQI	GTAC	8 cut(s)	57, 1152, 1600, 1985, 2452, 2735, 2977, 3124
DpnI	GATC	9 cut(s)	513, 1338, 1367, 1678, 2145, 2337, 2750, 2820, 3153
DpnII	GATC	9 cut(s)	511, 1336, 1365, 1676, 2143, 2335, 2748, 2818, 3151
DraI	TTTAAA	2 cut(s)	2224, 2679
DraIII	CACNNNGTG	2 cut(s)	914, 1792
DrdI	GACNNNNNNGTC	1 cut(s)	335
DseDI	GACNNNNNNGTC	1 cut(s)	335
Eam1104I	CTCTTC	1 cut(s)	2589
EarI	CTCTTC	1 cut(s)	2589
EciI	GGCGGA	2 cut(s)	130, 278
Eco105I	TACGTA	1 cut(s)	465
Eco130I	CCWWGG	3 cut(s)	531, 599, 1185
Eco147I	AGGCCT	1 cut(s)	2384
Eco24I	GRGCYC	1 cut(s)	1954
Eco32I	GATATC	2 cut(s)	1672, 2787
Eco47I	GGWCC	4 cut(s)	269, 2092, 2153, 2957
Eco57I	CTGAAG	4 cut(s)	151, 2157, 2759, 3095
Eco88I	CYCGRG	3 cut(s)	1947, 2247, 2952
EcoNI	CCTNNNNNAGG	1 cut(s)	2319
EcoRI	GAATTC	3 cut(s)	2082, 2367, 2397
EcoRII	CCWGG	4 cut(s)	1561, 2314, 2605, 2805
EcoRV	GATATC	2 cut(s)	1672, 2787
EcoT14I	CCWWGG	3 cut(s)	531, 599, 1185
EcoT38I	GRGCYC	1 cut(s)	1954
ErhI	CCWWGG	3 cut(s)	531, 599, 1185
Esp3I	CGTCTC	1 cut(s)	813
FalI	AAGNNNNNCTT	4 cut(s)	2130, 2162, 2586, 2618
FaqI	GGGAC	4 cut(s)	63, 1451, 1578, 2105
FauI	CCCGC	4 cut(s)	27, 201, 855, 2082
FauNDI	CATATG	1 cut(s)	1171
FbaI	TGATCA	1 cut(s)	2335
FblI	GTMKAC	3 cut(s)	548, 1050, 2874
FokI	GGATG	6 cut(s)	1211, 1367, 1427, 1864, 2275, 2984
FriOI	GRGCYC	1 cut(s)	1954
FspBI	CTAG	6 cut(s)	995, 1155, 1445, 1982, 2034, 2543
GlaI	GCGC	2 cut(s)	107, 728
GsuI	CTGGAG	3 cut(s)	107, 817, 1026
HaeIII	GGCC	3 cut(s)	1271, 1931, 2384
HapII	CCGG	7 cut(s)	12, 112, 355, 1352, 2074, 3091, 3144
HhaI	GCGC	2 cut(s)	108, 729
Hin6I	GCGC	2 cut(s)	106, 727
HinP1I	GCGC	2 cut(s)	106, 727
HincII	GTYRAC	4 cut(s)	549, 582, 2696, 2875
HindII	GTYRAC	4 cut(s)	549, 582, 2696, 2875
HindIII	AAGCTT	4 cut(s)	80, 593, 2899, 3077
HpaII	CCGG	7 cut(s)	12, 112, 355, 1352, 2074, 3091, 3144
HphI	GGTGA	5 cut(s)	325, 1205, 1735, 1753, 2663
Hpy99I	CGWCG	3 cut(s)	25, 2873, 2876
HpyAV	CCTTC	7 cut(s)	55, 502, 669, 1101, 1118, 1660, 2484
HpyCH4IV	ACGT	5 cut(s)	464, 874, 2423, 2692, 2868
HpyF10VI	GCNNNNNNNGC	6 cut(s)	88, 847, 1064, 1379, 1388, 3017
HpySE526I	ACGT	5 cut(s)	464, 874, 2423, 2692, 2868
HspAI	GCGC	2 cut(s)	106, 727
Ksp22I	TGATCA	1 cut(s)	2335
Kzo9I	GATC	9 cut(s)	511, 1336, 1365, 1676, 2143, 2335, 2748, 2818, 3151
LguI	GCTCTTC	1 cut(s)	2589
LweI	GCATC	9 cut(s)	301, 533, 1210, 1546, 1827, 1835, 2098, 2350, 3006
MabI	ACCWGGT	1 cut(s)	1561
MaeI	CTAG	6 cut(s)	995, 1155, 1445, 1982, 2034, 2543
MaeII	ACGT	5 cut(s)	464, 874, 2423, 2692, 2868
MalI	GATC	9 cut(s)	513, 1338, 1367, 1678, 2145, 2337, 2750, 2820, 3153
MbiI	CCGCTC	1 cut(s)	1032
MboI	GATC	9 cut(s)	511, 1336, 1365, 1676, 2143, 2335, 2748, 2818, 3151
MfeI	CAATTG	2 cut(s)	1532, 2021
MflI	RGATCY	3 cut(s)	1365, 1676, 2143
MhlI	GDGCHC	4 cut(s)	793, 939, 1954, 2951
MlyI	GAGTC	3 cut(s)	269, 545, 2057
MmeI	TCCRAC	4 cut(s)	81, 543, 1059, 2316
MroXI	GAANNNNTTC	5 cut(s)	164, 1086, 1128, 2145, 2519
MslI	CAYNNNNRTG	3 cut(s)	924, 930, 1899
MspA1I	CMGCKG	2 cut(s)	1328, 1373
MspCI	CTTAAG	1 cut(s)	2713
MspI	CCGG	7 cut(s)	12, 112, 355, 1352, 2074, 3091, 3144
MspR9I	CCNGG	4 cut(s)	1563, 2316, 2607, 2807
MunI	CAATTG	2 cut(s)	1532, 2021
Mva1269I	GAATGC	1 cut(s)	253
MvaI	CCWGG	4 cut(s)	1563, 2316, 2607, 2807
MwoI	GCNNNNNNNGC	6 cut(s)	88, 847, 1064, 1379, 1388, 3017
NcoI	CCATGG	2 cut(s)	599, 1185
NdeI	CATATG	1 cut(s)	1171
NdeII	GATC	9 cut(s)	511, 1336, 1365, 1676, 2143, 2335, 2748, 2818, 3151
NlaIV	GGNNCC	3 cut(s)	765, 1160, 2093
NmuCI	GTSAC	5 cut(s)	1402, 1759, 1886, 2626, 2938
NspI	RCATGY	5 cut(s)	354, 1403, 1612, 2881, 3063
PaeR7I	CTCGAG	2 cut(s)	2247, 2952
PagI	TCATGA	3 cut(s)	694, 1434, 2332
PceI	AGGCCT	1 cut(s)	2384
PciI	ACATGT	3 cut(s)	1399, 2877, 3059
PciSI	GCTCTTC	1 cut(s)	2589
PcsI	WCGNNNNNNNCGW	1 cut(s)	2092
PctI	GAATGC	1 cut(s)	253
PdmI	GAANNNNTTC	5 cut(s)	164, 1086, 1128, 2145, 2519
PflMI	CCANNNNNTGG	2 cut(s)	2362, 2966
PinAI	ACCGGT	1 cut(s)	2073
PleI	GAGTC	3 cut(s)	269, 544, 2056
PpsI	GAGTC	3 cut(s)	269, 544, 2056
Ppu21I	YACGTR	1 cut(s)	465
PscI	ACATGT	3 cut(s)	1399, 2877, 3059
PshAI	GACNNNNGTC	1 cut(s)	2047
PsiI	TTATAA	1 cut(s)	2115
Psp1406I	AACGTT	1 cut(s)	2423
Psp6I	CCWGG	4 cut(s)	1561, 2314, 2605, 2805
PspGI	CCWGG	4 cut(s)	1561, 2314, 2605, 2805
PspN4I	GGNNCC	3 cut(s)	765, 1160, 2093
PspPI	GGNCC	4 cut(s)	269, 2092, 2153, 2957
PspXI	VCTCGAGB	1 cut(s)	2247
PstNI	CAGNNNCTG	2 cut(s)	1705, 2782
PsuI	RGATCY	3 cut(s)	1365, 1676, 2143
PvuII	CAGCTG	2 cut(s)	1328, 1373
RsaI	GTAC	8 cut(s)	58, 1153, 1601, 1986, 2453, 2736, 2978, 3125
RsaNI	GTAC	8 cut(s)	57, 1152, 1600, 1985, 2452, 2735, 2977, 3124
RseI	CAYNNNNRTG	3 cut(s)	924, 930, 1899
SalI	GTCGAC	2 cut(s)	547, 2873
SapI	GCTCTTC	1 cut(s)	2589
Sau3AI	GATC	9 cut(s)	511, 1336, 1365, 1676, 2143, 2335, 2748, 2818, 3151
Sau96I	GGNCC	4 cut(s)	269, 2092, 2153, 2957
SchI	GAGTC	3 cut(s)	269, 545, 2057
ScrFI	CCNGG	4 cut(s)	1563, 2316, 2607, 2807
SduI	GDGCHC	4 cut(s)	793, 939, 1954, 2951
SexAI	ACCWGGT	1 cut(s)	1561
SfaNI	GCATC	9 cut(s)	301, 533, 1210, 1546, 1827, 1835, 2098, 2350, 3006
SfcI	CTRYAG	2 cut(s)	607, 1047
Sfr274I	CTCGAG	2 cut(s)	2247, 2952
SinI	GGWCC	4 cut(s)	269, 2092, 2153, 2957
SlaI	CTCGAG	2 cut(s)	2247, 2952
SmiMI	CAYNNNNRTG	3 cut(s)	924, 930, 1899
SmlI	CTYRAG	4 cut(s)	1424, 2247, 2713, 2952
SmoI	CTYRAG	4 cut(s)	1424, 2247, 2713, 2952
SnaBI	TACGTA	1 cut(s)	465
SseBI	AGGCCT	1 cut(s)	2384
SspI	AATATT	2 cut(s)	197, 2010
SspMI	CTAG	6 cut(s)	995, 1155, 1445, 1982, 2034, 2543
StuI	AGGCCT	1 cut(s)	2384
StyD4I	CCNGG	4 cut(s)	1561, 2314, 2605, 2805
StyI	CCWWGG	3 cut(s)	531, 599, 1185
TaiI	ACGT	5 cut(s)	467, 877, 2426, 2695, 2871
TaqII	GACCGA	2 cut(s)	2170, 3054
TatI	WGTACW	4 cut(s)	1151, 1599, 2451, 2734
TauI	GCSGC	4 cut(s)	130, 146, 841, 3056
TscAI	CASTG	7 cut(s)	547, 800, 1339, 1891, 2863, 2913, 2994
TseFI	GTSAC	5 cut(s)	1402, 1759, 1886, 2626, 2938
Tsp45I	GTSAC	5 cut(s)	1402, 1759, 1886, 2626, 2938
TspGWI	ACGGA	3 cut(s)	67, 1965, 2839
TspRI	CASTG	7 cut(s)	547, 800, 1339, 1891, 2863, 2913, 2994
Van91I	CCANNNNNTGG	2 cut(s)	2362, 2966
Vha464I	CTTAAG	1 cut(s)	2713
VneI	GTGCAC	1 cut(s)	789
VpaK11BI	GGWCC	4 cut(s)	269, 2092, 2153, 2957
XagI	CCTNNNNNAGG	1 cut(s)	2319
XapI	RAATTY	8 cut(s)	368, 1320, 2082, 2180, 2367, 2397, 2924, 2933
XceI	RCATGY	5 cut(s)	354, 1403, 1612, 2881, 3063
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3008
XhoI	CTCGAG	2 cut(s)	2247, 2952
XmiI	GTMKAC	3 cut(s)	548, 1050, 2874
XmnI	GAANNNNTTC	5 cut(s)	164, 1086, 1128, 2145, 2519
XspI	CTAG	6 cut(s)	995, 1155, 1445, 1982, 2034, 2543

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.