Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0008558

Physical Location & Seq

Genomic Coordinates Reverse (-)

8937218 .. 8945198

Gene Structure 7981 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g12750.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2118 bp

ATGTTCTTCTCGGGCGATTCATCGACTCGGAAGCGAGTTGATTTGGGGGGACGGAGTACGAAGGAAAGGGACAGGCAGAAGCTTTTGGAGCAGACAAGGTTGGAACGCAACCGCCGGTTGTGGATACGACAGCAGAACTCGGCGGCTTTGAAAATCCAGAAATGCTTCAGAGGGAGGAAGGTGGCAGCGGCTGAACATTCTAAGGTGCGCGAGCAGTTCTATGGAAGATATGGGAAGCACTGCCAGAATGTGGACAGGTTTAGTTTTGGTCCCGATTCAGAGTTTCTACGGCAGTTACTTTTCTTCTTTGATGCTCAAAGCGTTGGTGATTTTTCCATCCTTGTGGAGACGTGCCGGTTGCTTCATCAATTTGTCAGAGATACAGGGGATATTGTTAGCCTCATTGCGGGCATGGATTATTCGTACAAGCATGCTTTGGTGAAACACAGAGTGAAGCAGCTTGCATATATCTGTATTAAGGCTGTTCATCAAAACAGAAATCAGTTGAAGGATCGACTATTTGCAGCCCCAGAGGAGCCCACCATGTCAACAACTTTATTGTTAGAAGCATTAGTTTTATTGATAGATCATTTGGCCAAGCTTCCATGGGCTTGTGAGACAGTTGGCTATCTTTTGCAAAGAAGGGCTTTTGTCCTGTATAGAGAGATTATTTTTACAGGAAAGGAAAGTATAAAGACTCATAACTCAATTGGCAGAGTGTCTTCGTTGGAGCGTGGTCTTGCTGTTGTAATTTCTCACATTGGTCAGGAGCCATGTACCGATCCACATTGGAGTTTCTCTTCTCAAATTCTTACAGTTCCTTTTTTATGGAAGCTATTCCCCTACTTAGGAGAGGTTTTTGCAAGACAAGGGCTGAGCCAGCATTACATTAATCAAATGGCACTCTGTGTGAAAAGTCATGCTGATGTACTTCCAAAAGATGCATCAATTGAGTTACCCGGTTATGCCTGCCTTATTGGAAATATATTGGAATCTTCCGGAGTCGCTCTATCTCAGACTGACTGCTCATTTCAAATGGCTTTAGACCTTGCTGGCGTTGCAACATTCTTGTTGGAGGCCCTTCCTTCAATGAAATCATCAAATAGAGAAAGCAAAGAAGATTCGATGGGTGATGATGACATGATTGAAGGAGATGATGCAATGGAAGTTTGTTTAAATAACAATTTAGAGCGACAGATATGTGATGCCATAGATCTGCGCTTTCTTCTGCAATTAACAAATGTTTTGTTTGGAGGTATTTCACTTGCCAGTGGCTCGCACCACGGACCTGATGATAAAGAGGTGTCAGCTGTTGGTGCGGCTTGTGCTTTTCTACATGTTACTTTCAACACCTTACCTCTGGAGAGAATCATGACTATACTAGCTTATAGAACGAAACTTGTTCCGGTGCTTTGGAATTTTATGAGACGGTGCCATGAAAATCAGAAATGGCAGTCAGTGTCTGAGCAGTTGGCGTATCTGCTGCCTGGAGATGCACCTGGCTGGCTATTACCTTTGGCTGTATTCTGTCCTGTGTACAAGCACATGCTTACATTAGTTGATAATGAAGAGTTCTATGAGCAGGAGAAGCCACTGTCATTGAAGGATATCAGATGCCTAGTTATCATACTCAGACAGGCCCTATGGCAACTTCTTTGGGTGAATCCTACAGCTCCCACTAATTCTATGAAACCTGTCACAACCCGCGCTTCTAATAAGAAGCACCCTGTGGAGTTAATTCAACATAGGGTTAGCATTGTAGCTTCTGAACTCCTCTCCCAGTTGCAAGATTGGAACAATAGACGTGAATTCACATCCCCCAGTGACTTCCATGCTGATGGTGTCAATGAGTTCTTTATTGCACAGGCTGTGATAGAAAATACTCGGGCAAATGACATCATGAAGCAAGCTCCCTTCCTGGTACCATTCACAAGCAGAGTTAAAATATTCACTTCACAATTGGCAGCAGCTAGACAAAGACATGAGTCTAATTCTGTATTTACCAGAAACCGATTCAGAATACGGCGGGATCGTATCTTGGAAGATGCTTATGATCAAATGAGTGCGCTGTCTGATGATCGATCTTCGGGGACCGATTCGTGTAACGTTTGTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

HECT

Protein Analysis

706

Amino Acids

80.23

Weight (kDa)

8.35

Isoelectric Point (pI)

47.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008558)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17205 AT3G17205 AT3G17205
fragaria_vesca	FvH4_4g20760 FvH4_4g20760 FvH4_4g20760 FvH4_4g20760
malus_domestica	MD13G1148100.v1.1 MD16G1148200.v1.1
prunus_persica	Prupe.1G111600_v2.0.a1 Prupe.1G111600_v2.0.a1
pyrus_communis	pycom13g12750 pycom16g12650
rosa_chinensis	RchiOBHm_Chr4g0426201
rosa_laevigata	RLG00000007311
rosa_multiflora	Rmu_sc0000730.1_g000025
rosa_roxburghii	Rroxscaffold_5G00368220
rosa_rugosa	Rorug04G0209500
rosa_samantha	Rh4AG266300 Rh4BG272400 Rh4CG285600 Rh4DG268700
rosa_wichuraiana	Rw4G023030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1921
AccB1I	GGYRCC	2 cut(s)	1431, 1921
AccB7I	CCANNNNNTGG	1 cut(s)	250
AccII	CGCG	2 cut(s)	210, 1707
AccIII	TCCGGA	1 cut(s)	998
AciI	CCGC	7 cut(s)	112, 143, 188, 407, 1319, 1705, 2026
AclI	AACGTT	1 cut(s)	2106
AclWI	GGATC	3 cut(s)	519, 776, 2037
AcoI	YGGCCR	1 cut(s)	594
AcsI	RAATTY	3 cut(s)	807, 1417, 1808
AcuI	CTGAAG	1 cut(s)	151
AdeI	CACNNNGTG	3 cut(s)	451, 908, 1729
AfaI	GTAC	6 cut(s)	58, 425, 778, 930, 1538, 1923
AfiI	CCNNNNNNNGG	3 cut(s)	250, 406, 848
AflIII	ACRYGT	1 cut(s)	1336
AgsI	TTSAA	8 cut(s)	151, 508, 1034, 1089, 1148, 1348, 1603, 1742
AjiI	CACGTC	2 cut(s)	351, 1805
AjnI	CCWGG	3 cut(s)	1486, 1498, 1917
Alw26I	GTCTC	3 cut(s)	341, 611, 1420
AlwI	GGATC	3 cut(s)	519, 776, 2037
AlwNI	CAGNNNCTG	2 cut(s)	191, 1463
Ama87I	CYCGRG	2 cut(s)	10, 1884
Aor13HI	TCCGGA	1 cut(s)	998
AoxI	GGCC	3 cut(s)	594, 1077, 1638
ApeKI	GCWGC	6 cut(s)	185, 457, 524, 1483, 1964, 1967
ApoI	RAATTY	3 cut(s)	807, 1417, 1808
AseI	ATTAAT	1 cut(s)	891
Asp700I	GAANNNNTTC	2 cut(s)	164, 836
Asp718I	GGTACC	1 cut(s)	1921
AspLEI	GCGC	4 cut(s)	210, 1221, 1709, 2068
AspS9I	GGNCC	5 cut(s)	269, 1078, 1286, 1639, 2091
AsuC2I	CCSGG	1 cut(s)	960
AsuHPI	GGTGA	4 cut(s)	338, 451, 1142, 1672
AvaI	CYCGRG	2 cut(s)	10, 1884
AvaII	GGWCC	3 cut(s)	269, 1286, 2091
BalI	TGGCCA	1 cut(s)	596
BanI	GGYRCC	2 cut(s)	1431, 1921
BanII	GRGCYC	1 cut(s)	540
BbsI	GAAGAC	1 cut(s)	714
BbvI	GCAGC	6 cut(s)	197, 469, 536, 1470, 1976, 1979
BccI	CCATC	3 cut(s)	344, 1120, 1832
BceAI	ACGGC	2 cut(s)	305, 2039
BciT130I	CCWGG	3 cut(s)	1488, 1500, 1919
BciVI	GTATCC	1 cut(s)	117
BclI	TGATCA	1 cut(s)	2053
BcnI	CCSGG	1 cut(s)	960
BcoDI	GTCTC	3 cut(s)	341, 611, 1420
BfaI	CTAG	3 cut(s)	1382, 1619, 1971
BfmI	CTRYAG	1 cut(s)	1668
BfuI	GTATCC	1 cut(s)	117
BglII	AGATCT	1 cut(s)	1213
BisI	GCNGC	9 cut(s)	144, 186, 189, 458, 525, 1320, 1484, 1965, 1968
BlpI	GCTNAGC	1 cut(s)	875
BlsI	GCNGC	9 cut(s)	145, 187, 190, 459, 526, 1321, 1485, 1966, 1969
Bme1390I	CCNGG	4 cut(s)	960, 1488, 1500, 1919
Bme18I	GGWCC	3 cut(s)	269, 1286, 2091
BmeT110I	CYCGRG	2 cut(s)	10, 1884
BmgBI	CACGTC	2 cut(s)	351, 1805
BmgT120I	GGNCC	5 cut(s)	269, 1078, 1286, 1639, 2091
BmiI	GGNNCC	6 cut(s)	271, 537, 771, 1433, 1923, 2092
BmrFI	CCNGG	4 cut(s)	960, 1488, 1500, 1919
BmrI	ACTGGG	2 cut(s)	1774, 1815
BmsI	GCATC	8 cut(s)	301, 931, 953, 1147, 1195, 1483, 1604, 2035
BmuI	ACTGGG	2 cut(s)	1774, 1815
BoxI	GACNNNNGTC	1 cut(s)	1984
BpiI	GAAGAC	1 cut(s)	714
BpmI	CTGGAG	2 cut(s)	1382, 1509
Bpu1102I	GCTNAGC	1 cut(s)	875
BpuMI	CCSGG	1 cut(s)	960
Bsa29I	ATCGAT	1 cut(s)	2080
BsaJI	CCNNGG	2 cut(s)	605, 1282
BsaWI	WCCGGW	2 cut(s)	998, 1405
Bsc4I	CCNNNNNNNGG	3 cut(s)	250, 406, 848
Bse118I	RCCGGY	2 cut(s)	114, 354
Bse1I	ACTGG	3 cut(s)	1269, 1780, 1821
Bse3DI	GCAATG	2 cut(s)	402, 1167
BseAI	TCCGGA	1 cut(s)	998
BseBI	CCWGG	3 cut(s)	1488, 1500, 1919
BseCI	ATCGAT	1 cut(s)	2080
BseDI	CCNNGG	2 cut(s)	605, 1282
BseGI	GGATG	2 cut(s)	336, 1814
BseLI	CCNNNNNNNGG	3 cut(s)	250, 406, 848
BseMI	GCAATG	2 cut(s)	402, 1167
BseMII	CTCAG	4 cut(s)	866, 1028, 1455, 1645
BseNI	ACTGG	3 cut(s)	1269, 1780, 1821
BseRI	GAGGAG	2 cut(s)	548, 1763
BseXI	GCAGC	6 cut(s)	197, 469, 536, 1470, 1976, 1979
Bsh1236I	CGCG	2 cut(s)	210, 1707
BshFI	GGCC	3 cut(s)	596, 1079, 1640
BshNI	GGYRCC	2 cut(s)	1431, 1921
BshVI	ATCGAT	1 cut(s)	2080
BsiHKCI	CYCGRG	2 cut(s)	10, 1884
BsiSI	CCGG	5 cut(s)	115, 355, 960, 999, 1406
BslFI	GGGAC	4 cut(s)	63, 83, 255, 2104
BslI	CCNNNNNNNGG	3 cut(s)	250, 406, 848
BsmAI	GTCTC	3 cut(s)	341, 611, 1420
BsmBI	CGTCTC	2 cut(s)	341, 1420
BsmFI	GGGAC	4 cut(s)	63, 83, 255, 2104
BsnI	GGCC	3 cut(s)	596, 1079, 1640
BsoBI	CYCGRG	2 cut(s)	10, 1884
Bsp1286I	GDGCHC	1 cut(s)	540
Bsp13I	TCCGGA	1 cut(s)	998
Bsp1407I	TGTACA	1 cut(s)	1536
Bsp143I	GATC	8 cut(s)	511, 586, 781, 1213, 2029, 2053, 2077, 2081
Bsp1720I	GCTNAGC	1 cut(s)	875
Bsp19I	CCATGG	1 cut(s)	605
BspACI	CCGC	7 cut(s)	112, 143, 188, 407, 1319, 1705, 2026
BspANI	GGCC	3 cut(s)	596, 1079, 1640
BspCNI	CTCAG	4 cut(s)	867, 1027, 1456, 1644
BspDI	ATCGAT	1 cut(s)	2080
BspEI	TCCGGA	1 cut(s)	998
BspFNI	CGCG	2 cut(s)	210, 1707
BspHI	TCATGA	2 cut(s)	1371, 1899
BspLI	GGNNCC	6 cut(s)	271, 537, 771, 1433, 1923, 2092
BspPI	GGATC	3 cut(s)	519, 776, 2037
BspT107I	GGYRCC	2 cut(s)	1431, 1921
BsrDI	GCAATG	2 cut(s)	402, 1167
BsrFI	RCCGGY	2 cut(s)	114, 354
BsrGI	TGTACA	1 cut(s)	1536
BsrI	ACTGG	3 cut(s)	1269, 1780, 1821
BssAI	RCCGGY	2 cut(s)	114, 354
BssECI	CCNNGG	2 cut(s)	605, 1282
BssMI	GATC	8 cut(s)	511, 586, 781, 1213, 2029, 2053, 2077, 2081
BssT1I	CCWWGG	1 cut(s)	605
Bst2UI	CCWGG	3 cut(s)	1488, 1500, 1919
Bst4CI	ACNGT	4 cut(s)	622, 817, 1431, 1596
Bst6I	CTCTTC	2 cut(s)	805, 1563
BstAUI	TGTACA	1 cut(s)	1536
BstDEI	CTNAG	6 cut(s)	201, 847, 875, 1014, 1464, 1631
BstDSI	CCRYGG	2 cut(s)	605, 1282
BstF5I	GGATG	2 cut(s)	336, 1814
BstFNI	CGCG	2 cut(s)	210, 1707
BstHHI	GCGC	4 cut(s)	210, 1221, 1709, 2068
BstKTI	GATC	8 cut(s)	514, 589, 784, 1216, 2032, 2056, 2080, 2084
BstMAI	GTCTC	3 cut(s)	341, 611, 1420
BstMBI	GATC	8 cut(s)	511, 586, 781, 1213, 2029, 2053, 2077, 2081
BstMWI	GCNNNNNNNGC	6 cut(s)	88, 880, 1058, 1316, 1325, 1588
BstNI	CCWGG	3 cut(s)	1488, 1500, 1919
BstNSI	RCATGY	3 cut(s)	434, 1340, 1549
BstPAI	GACNNNNGTC	1 cut(s)	1984
BstSCI	CCNGG	4 cut(s)	958, 1486, 1498, 1917
BstSFI	CTRYAG	1 cut(s)	1668
BstUI	CGCG	2 cut(s)	210, 1707
BstV1I	GCAGC	6 cut(s)	197, 469, 536, 1470, 1976, 1979
BstV2I	GAAGAC	1 cut(s)	714
BstX2I	RGATCY	1 cut(s)	1213
BstXI	CCANNNNNNTGG	2 cut(s)	343, 1838
BstYI	RGATCY	1 cut(s)	1213
Bsu15I	ATCGAT	1 cut(s)	2080
BsuI	GTATCC	1 cut(s)	117
BsuRI	GGCC	3 cut(s)	596, 1079, 1640
BsuTUI	ATCGAT	1 cut(s)	2080
BtgI	CCRYGG	2 cut(s)	605, 1282
BtrI	CACGTC	2 cut(s)	351, 1805
BtsCI	GGATG	2 cut(s)	336, 1814
BtsI	GCAGTG	1 cut(s)	238
BtsIMutI	CAGTG	5 cut(s)	238, 1276, 1464, 1592, 1828
CaiI	CAGNNNCTG	2 cut(s)	191, 1463
CciI	TCATGA	2 cut(s)	1371, 1899
CfoI	GCGC	4 cut(s)	210, 1221, 1709, 2068
Cfr10I	RCCGGY	2 cut(s)	114, 354
Cfr13I	GGNCC	5 cut(s)	269, 1078, 1286, 1639, 2091
ClaI	ATCGAT	1 cut(s)	2080
Csp6I	GTAC	6 cut(s)	57, 424, 777, 929, 1537, 1922
CspCI	CAANNNNNGTGG	2 cut(s)	1581, 1616
CviQI	GTAC	6 cut(s)	57, 424, 777, 929, 1537, 1922
DdeI	CTNAG	6 cut(s)	201, 847, 875, 1014, 1464, 1631
DpnI	GATC	8 cut(s)	513, 588, 783, 1215, 2031, 2055, 2079, 2083
DpnII	GATC	8 cut(s)	511, 586, 781, 1213, 2029, 2053, 2077, 2081
DraI	TTTAAA	1 cut(s)	1176
DraIII	CACNNNGTG	3 cut(s)	451, 908, 1729
EaeI	YGGCCR	1 cut(s)	594
Eam1104I	CTCTTC	2 cut(s)	805, 1563
EarI	CTCTTC	2 cut(s)	805, 1563
Eco130I	CCWWGG	1 cut(s)	605
Eco24I	GRGCYC	1 cut(s)	540
Eco32I	GATATC	1 cut(s)	1609
Eco47I	GGWCC	3 cut(s)	269, 1286, 2091
Eco57I	CTGAAG	1 cut(s)	151
Eco88I	CYCGRG	2 cut(s)	10, 1884
EcoO109I	RGGNCCY	2 cut(s)	1078, 1639
EcoRI	GAATTC	1 cut(s)	1808
EcoRII	CCWGG	3 cut(s)	1486, 1498, 1917
EcoRV	GATATC	1 cut(s)	1609
EcoT14I	CCWWGG	1 cut(s)	605
EcoT22I	ATGCAT	1 cut(s)	946
EcoT38I	GRGCYC	1 cut(s)	540
ErhI	CCWWGG	1 cut(s)	605
Esp3I	CGTCTC	2 cut(s)	341, 1420
FalI	AAGNNNNNCTT	2 cut(s)	631, 663
FaqI	GGGAC	4 cut(s)	63, 83, 255, 2104
FauI	CCCGC	3 cut(s)	400, 1712, 2019
FbaI	TGATCA	1 cut(s)	2053
Fnu4HI	GCNGC	9 cut(s)	144, 186, 189, 458, 525, 1320, 1484, 1965, 1968
FokI	GGATG	2 cut(s)	323, 1801
FriOI	GRGCYC	1 cut(s)	540
Fsp4HI	GCNGC	9 cut(s)	144, 186, 189, 458, 525, 1320, 1484, 1965, 1968
FspBI	CTAG	3 cut(s)	1382, 1619, 1971
GlaI	GCGC	4 cut(s)	209, 1220, 1708, 2067
GluI	GCNGC	9 cut(s)	144, 186, 189, 458, 525, 1320, 1484, 1965, 1968
GsuI	CTGGAG	2 cut(s)	1382, 1509
HaeIII	GGCC	3 cut(s)	596, 1079, 1640
HapII	CCGG	5 cut(s)	115, 355, 960, 999, 1406
HhaI	GCGC	4 cut(s)	210, 1221, 1709, 2068
Hin6I	GCGC	4 cut(s)	208, 1219, 1707, 2066
HinP1I	GCGC	4 cut(s)	208, 1219, 1707, 2066
HincII	GTYRAC	1 cut(s)	549
HindII	GTYRAC	1 cut(s)	549
HindIII	AAGCTT	2 cut(s)	80, 599
HpaII	CCGG	5 cut(s)	115, 355, 960, 999, 1406
HphI	GGTGA	4 cut(s)	338, 451, 1142, 1672
Hpy166II	GTNNAC	3 cut(s)	253, 549, 1537
Hpy188III	TCNNGA	7 cut(s)	157, 272, 767, 999, 1361, 1372, 1900
Hpy8I	GTNNAC	3 cut(s)	253, 549, 1537
HpyAV	CCTTC	9 cut(s)	55, 172, 502, 636, 1091, 1095, 1142, 1597, 1924
HpyCH4III	ACNGT	4 cut(s)	622, 817, 1431, 1596
HpyCH4IV	ACGT	3 cut(s)	350, 1804, 2106
HpyF10VI	GCNNNNNNNGC	6 cut(s)	88, 880, 1058, 1316, 1325, 1588
HpyF3I	CTNAG	6 cut(s)	201, 847, 875, 1014, 1464, 1631
HpySE526I	ACGT	3 cut(s)	350, 1804, 2106
HspAI	GCGC	4 cut(s)	208, 1219, 1707, 2066
Kpn2I	TCCGGA	1 cut(s)	998
KpnI	GGTACC	1 cut(s)	1925
Ksp22I	TGATCA	1 cut(s)	2053
Kzo9I	GATC	8 cut(s)	511, 586, 781, 1213, 2029, 2053, 2077, 2081
LmnI	GCTCC	6 cut(s)	88, 535, 730, 769, 1678, 1915
Lsp1109I	GCAGC	6 cut(s)	197, 469, 536, 1470, 1976, 1979
LweI	GCATC	8 cut(s)	301, 931, 953, 1147, 1195, 1483, 1604, 2035
MaeI	CTAG	3 cut(s)	1382, 1619, 1971
MaeII	ACGT	3 cut(s)	350, 1804, 2106
MaeIII	GTNAC	6 cut(s)	294, 954, 1339, 1696, 1823, 2102
MalI	GATC	8 cut(s)	513, 588, 783, 1215, 2031, 2055, 2079, 2083
MboI	GATC	8 cut(s)	511, 586, 781, 1213, 2029, 2053, 2077, 2081
MfeI	CAATTG	3 cut(s)	708, 948, 1958
MflI	RGATCY	1 cut(s)	1213
MhlI	GDGCHC	1 cut(s)	540
MlsI	TGGCCA	1 cut(s)	596
MluNI	TGGCCA	1 cut(s)	596
MlyI	GAGTC	4 cut(s)	19, 691, 1011, 1994
MmeI	TCCRAC	3 cut(s)	81, 708, 1053
Mox20I	TGGCCA	1 cut(s)	596
Mph1103I	ATGCAT	1 cut(s)	946
MroI	TCCGGA	1 cut(s)	998
MroXI	GAANNNNTTC	2 cut(s)	164, 836
MscI	TGGCCA	1 cut(s)	596
MseI	TTAA	6 cut(s)	477, 891, 1175, 1235, 1736, 1941
MslI	CAYNNNNRTG	3 cut(s)	341, 924, 1836
Msp20I	TGGCCA	1 cut(s)	596
MspA1I	CMGCKG	2 cut(s)	188, 1310
MspI	CCGG	5 cut(s)	115, 355, 960, 999, 1406
MspR9I	CCNGG	4 cut(s)	960, 1488, 1500, 1919
MunI	CAATTG	3 cut(s)	708, 948, 1958
MvaI	CCWGG	3 cut(s)	1488, 1500, 1919
MvnI	CGCG	2 cut(s)	210, 1707
MwoI	GCNNNNNNNGC	6 cut(s)	88, 880, 1058, 1316, 1325, 1588
NciI	CCSGG	1 cut(s)	960
NcoI	CCATGG	1 cut(s)	605
NdeII	GATC	8 cut(s)	511, 586, 781, 1213, 2029, 2053, 2077, 2081
NlaIV	GGNNCC	6 cut(s)	271, 537, 771, 1433, 1923, 2092
NmeAIII	GCCGAG	1 cut(s)	119
NmuCI	GTSAC	2 cut(s)	1696, 1823
NsiI	ATGCAT	1 cut(s)	946
NspI	RCATGY	3 cut(s)	434, 1340, 1549
PaeI	GCATGC	1 cut(s)	434
PagI	TCATGA	2 cut(s)	1371, 1899
PciI	ACATGT	1 cut(s)	1336
PcsI	WCGNNNNNNNCGW	1 cut(s)	2029
PdmI	GAANNNNTTC	2 cut(s)	164, 836
PfeI	GAWTC	8 cut(s)	17, 275, 992, 1121, 1368, 1663, 2013, 2096
PflMI	CCANNNNNTGG	1 cut(s)	250
PkrI	GCNGC	9 cut(s)	145, 187, 190, 459, 526, 1321, 1485, 1966, 1969
PleI	GAGTC	4 cut(s)	19, 691, 1010, 1993
PpsI	GAGTC	4 cut(s)	19, 691, 1010, 1993
PscI	ACATGT	1 cut(s)	1336
PshAI	GACNNNNGTC	1 cut(s)	1984
PshBI	ATTAAT	1 cut(s)	891
Psp1406I	AACGTT	1 cut(s)	2106
Psp6I	CCWGG	3 cut(s)	1486, 1498, 1917
PspGI	CCWGG	3 cut(s)	1486, 1498, 1917
PspN4I	GGNNCC	6 cut(s)	271, 537, 771, 1433, 1923, 2092
PspPI	GGNCC	5 cut(s)	269, 1078, 1286, 1639, 2091
PstNI	CAGNNNCTG	2 cut(s)	191, 1463
PsuI	RGATCY	1 cut(s)	1213
PvuII	CAGCTG	1 cut(s)	1310
RsaI	GTAC	6 cut(s)	58, 425, 778, 930, 1538, 1923
RsaNI	GTAC	6 cut(s)	57, 424, 777, 929, 1537, 1922
RseI	CAYNNNNRTG	3 cut(s)	341, 924, 1836
SaqAI	TTAA	6 cut(s)	477, 891, 1175, 1235, 1736, 1941
SatI	GCNGC	9 cut(s)	144, 186, 189, 458, 525, 1320, 1484, 1965, 1968
Sau3AI	GATC	8 cut(s)	511, 586, 781, 1213, 2029, 2053, 2077, 2081
Sau96I	GGNCC	5 cut(s)	269, 1078, 1286, 1639, 2091
SchI	GAGTC	4 cut(s)	19, 691, 1011, 1994
ScrFI	CCNGG	4 cut(s)	960, 1488, 1500, 1919
SduI	GDGCHC	1 cut(s)	540
SfaNI	GCATC	8 cut(s)	301, 931, 953, 1147, 1195, 1483, 1604, 2035
SfcI	CTRYAG	1 cut(s)	1668
SinI	GGWCC	3 cut(s)	269, 1286, 2091
SmiMI	CAYNNNNRTG	3 cut(s)	341, 924, 1836
SphI	GCATGC	1 cut(s)	434
SsiI	CCGC	7 cut(s)	112, 143, 188, 407, 1319, 1705, 2026
SspI	AATATT	1 cut(s)	1947
SspMI	CTAG	3 cut(s)	1382, 1619, 1971
StyD4I	CCNGG	4 cut(s)	958, 1486, 1498, 1917
StyI	CCWWGG	1 cut(s)	605
TaaI	ACNGT	4 cut(s)	622, 817, 1431, 1596
TaiI	ACGT	3 cut(s)	353, 1807, 2109
TaqI	TCGA	4 cut(s)	23, 514, 1124, 2080
TaqII	GACCGA	1 cut(s)	2108
TatI	WGTACW	2 cut(s)	928, 1536
TauI	GCSGC	3 cut(s)	146, 191, 1322
TfiI	GAWTC	8 cut(s)	17, 275, 992, 1121, 1368, 1663, 2013, 2096
Tru1I	TTAA	6 cut(s)	477, 891, 1175, 1235, 1736, 1941
Tru9I	TTAA	6 cut(s)	477, 891, 1175, 1235, 1736, 1941
TscAI	CASTG	5 cut(s)	245, 1276, 1464, 1599, 1828
TseFI	GTSAC	2 cut(s)	1696, 1823
TseI	GCWGC	6 cut(s)	185, 457, 524, 1483, 1964, 1967
Tsp45I	GTSAC	2 cut(s)	1696, 1823
TspDTI	ATGAA	8 cut(s)	9, 353, 476, 1106, 1452, 1581, 1703, 1916
TspGWI	ACGGA	2 cut(s)	67, 1299
TspRI	CASTG	5 cut(s)	245, 1276, 1464, 1599, 1828
Van91I	CCANNNNNTGG	1 cut(s)	250
VpaK11BI	GGWCC	3 cut(s)	269, 1286, 2091
VspI	ATTAAT	1 cut(s)	891
XapI	RAATTY	3 cut(s)	807, 1417, 1808
XceI	RCATGY	3 cut(s)	434, 1340, 1549
XmnI	GAANNNNTTC	2 cut(s)	164, 836
XspI	CTAG	3 cut(s)	1382, 1619, 1971
Zsp2I	ATGCAT	1 cut(s)	946

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.