Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000730.1

Orthogroup ID

OG0008558

Physical Location & Seq

Genomic Coordinates Forward (+)

129035 .. 139092

Gene Structure 10058 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000730.1_g000025.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3105 bp

atgttcttctccggcgattcgtcgaatcggaagcgcgtggatttggggggacggagtacgaaggagagggataggcagaagcttctggagcaaacgaggttggagcgcaaccggcggttgtggttacgccagcagaactcggccgcaactaagattcagaaatgcttcagagggagaaaggtagcaacatctgaatattccaaggtgcgggaacagttctatggaacatatgggaaacattgccagaatgcagataaatcgtgttttggtccagactcagactttctccgccagttgctttttttcttcgatgctcgaagtgttggcgacttttccattcttgtggaaacatgccggttacttaagcaatttgtcatagatacaggggatacggtgagcctctttgcaggcatggattattcatcgaagcatgctttggtaaattacagagtgaagaaacttgcatatctgtgtatcaaggctgttcatcaaaatagaaatcaattgaaggatcaactttttgcatctccccaggagtgcactgtgccgacaactttattgttggaaacagtagtcttgttgattgatcataagcttccatgggtttgtaagacagttagctatcttctggaaagaaaagcatttaccctgtttagagagattattttaacaggaagggctagtatagagactcataattgcattgacagagtatcttcattggagcgcactcttgctgttgtaattcctcacgttggtcaggagccatgtaactgcccaaacgttggtccacactggagtttttcgtctcagattcttacaattccgttcttgtggaagctactaccatatttaagagggggttttgcaacgcgtgggctgagccaacattacattcatcagatggcactctgtgtgcataatcatgctgatgtgcttcccaatgatacatcagttgagttacccagttatgcctgccttctgggaaatatactagaatcttctggagttgctctgtctcagcctgactgctcatttgaaatggctgtagaccttgctgctgttgcaacattcttgttggaatcccttccttcaataaaatcgtcaaatagacaaggcaaggaagattccatggtgggtgaggatgatactgagggagatgatgcaatggaaatatgtttgaataatgatttggaacggcagatttgtgaggccatagattcacgctttcttctgcaatttacaaatgttttgttcggagggatttcacttgtcagtgattcacataaagcaccggatgatagagaggtgtcagctgttggcgcagcgtgtgcttttctacatgtcactttcaacaccttacctcttgagagaatcatgactatcctagcttatagaacggaacttgtccctgttctatggaactttatgaaacggtgcaatgagaaccagaaatggtcttcattgtctgagcaattggcatatctactgtcaggagatgcacctggttggctattacctttggcagttttctgtcctgtgtacaagcacatgcttacaatagttgataatgaggagttctatgaacaggagaggccactatcgttgaaggatatcagatccctaattatcatactcagacaggctctatggcagcttctctgggtgaatcctacggctcccagtaactcttcgaaatctgtcaccagcacccctgcaaagaagaagcaccctgtggagttcattcaacagagggttgggatcgtagcatctgaactcctctcccagttgcaagattggaacaatagacgagagtttacttcccccagtgacttccatgctgatggtgtcaatgatttcttcatttcgcaggccgtgatagaaaatacccgagccaatgacattttgaagcaagctccgtttctagtaccgttcacaagcagagttaaaatattcacttcacaattggcagcagctagacaaagacacgagtctaattctgtgtttaccagaaaccggttcagaatacggcgggatcgtatcttggaagatgcgtataatcagatgagtgcattgtctgaagaagatcttcgaggaccgattcgggtaacatttgtaaatgaatttggggttgaagaagctggaattgatggtggtgggatttttaaagatttcatggagaacattactcgagcagcctttgatgtccagtatggtttatttaaggaaacatccgaccatctcctctaccctaatcctggttcaggaatgattcatgatcagcatctccaatttttccactttctgggaattcttcttgcaaaggccttgtttgagggaattcttgttgatattccatttgcaacattcttcctgagcaaattaaagcagaagtacaactacttgaatgatttaccttcattagaccaagaattgtatcgccaccttattttcttgaagcatttcaaaggtgatatttcagaactagaactatattttgtgattgtaaataatgagtatggggagcaaacggaggaggagctgcttccgggcggaaaaaacctacgtgtcactaatgacaatgtcattacttttattcatcttgttgccaatcaccgtttaaattatcagatacgtcaacaaagttctcatttcttaagggggtttcagcagcttatacagaaagattggattgatatgtttaatgagcatgaacttcagcttctgatatcaggttcacttgacagcctggatattgatgatctacggagaaacactaactatgttggtggctatcacagtgagcattatgttgttgacatgttctgggaagttctcaaaagcttttcattggaaaatcagaagaaatttttgaaatttgtgactgggtgctctagaggaccattgcttgggttcaagtaccttgaaccattgttttgcatccagagagctgctggtagtgcaactgatgaagctcttgaccgattgccaactgcggctacatgtatgaatctgctgaagcttccaccatatcggagcaaggagcaattagaaacgaagttgatgtatgcaatcagtgcagaagctggttttgatttgagctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

HECT

Protein Analysis

1034

Amino Acids

118.03

Weight (kDa)

6.27

Isoelectric Point (pI)

43.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008558)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17205 AT3G17205 AT3G17205
fragaria_vesca	FvH4_4g20760 FvH4_4g20760 FvH4_4g20760 FvH4_4g20760
malus_domestica	MD13G1148100.v1.1 MD16G1148200.v1.1
prunus_persica	Prupe.1G111600_v2.0.a1 Prupe.1G111600_v2.0.a1
pyrus_communis	pycom13g12750 pycom16g12650
rosa_chinensis	RchiOBHm_Chr4g0426201
rosa_laevigata	RLG00000007311
rosa_multiflora	Rmu_sc0000730.1_g000025
rosa_roxburghii	Rroxscaffold_5G00368220
rosa_rugosa	Rorug04G0209500
rosa_samantha	Rh4AG266300 Rh4BG272400 Rh4CG285600 Rh4DG268700
rosa_wichuraiana	Rw4G023030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	785, 2305, 2909
AccI	GTMKAC	1 cut(s)	1050
AccII	CGCG	2 cut(s)	36, 874
AciI	CCGC	7 cut(s)	115, 144, 208, 289, 2032, 2553, 2996
AclI	AACGTT	1 cut(s)	783
AclWI	GGATC	4 cut(s)	519, 1614, 1769, 2043
AcoI	YGGCCR	1 cut(s)	141
AcsI	RAATTY	5 cut(s)	2123, 2310, 2340, 2867, 2876
AcuI	CTGAAG	4 cut(s)	151, 2100, 2702, 3038
AdeI	CACNNNGTG	2 cut(s)	914, 1735
AfaI	GTAC	5 cut(s)	58, 1544, 1929, 2396, 2921
AfiI	CCNNNNNNNGG	8 cut(s)	207, 755, 785, 2016, 2258, 2264, 2305, 2909
AflII	CTTAAG	2 cut(s)	362, 2656
AflIII	ACRYGT	5 cut(s)	872, 1342, 2566, 2820, 3002
AgeI	ACCGGT	1 cut(s)	2016
AjnI	CCWGG	4 cut(s)	531, 1504, 2257, 2748
AjuI	GAANNNNNNNTTGG	6 cut(s)	419, 451, 879, 911, 1175, 1207
Alw21I	GWGCWC	2 cut(s)	542, 2894
Alw26I	GTCTC	3 cut(s)	683, 813, 1023
Alw44I	GTGCAC	1 cut(s)	538
AlwI	GGATC	4 cut(s)	519, 1614, 1769, 2043
AlwNI	CAGNNNCTG	2 cut(s)	2725, 3086
Ama87I	CYCGRG	2 cut(s)	1890, 2190
AoxI	GGCC	5 cut(s)	141, 1212, 1595, 1872, 2325
ApaLI	GTGCAC	1 cut(s)	538
ApeKI	GCWGC	9 cut(s)	1058, 1325, 1654, 1970, 1973, 2195, 2542, 2671, 2951
ApoI	RAATTY	5 cut(s)	2123, 2310, 2340, 2867, 2876
ArsI	GACNNNNNNTTYG	2 cut(s)	1019, 1051
AsiGI	ACCGGT	1 cut(s)	2016
Asp700I	GAANNNNTTC	4 cut(s)	164, 1086, 2088, 2462
AspLEI	GCGC	4 cut(s)	36, 108, 729, 1325
AspS9I	GGNCC	4 cut(s)	269, 788, 2096, 2900
AsuC2I	CCSGG	1 cut(s)	2550
AsuHPI	GGTGA	6 cut(s)	406, 1151, 1678, 1696, 2483, 2606
AsuII	TTCGAA	1 cut(s)	1694
AvaI	CYCGRG	2 cut(s)	1890, 2190
AvaII	GGWCC	4 cut(s)	269, 788, 2096, 2900
BaeGI	GKGCMC	1 cut(s)	542
BaeI	ACNNNNGTAYC	2 cut(s)	939, 972
BarI	GAAGNNNNNNTAC	2 cut(s)	2384, 2416
BauI	CACGAG	1 cut(s)	1988
BbsI	GAAGAC	1 cut(s)	1452
Bbv12I	GWGCWC	2 cut(s)	542, 2894
BbvI	GCAGC	9 cut(s)	1045, 1337, 1666, 1982, 1985, 2207, 2529, 2683, 2938
BccI	CCATC	4 cut(s)	898, 1838, 2144, 2247
BceAI	ACGGC	4 cut(s)	1214, 1692, 1859, 2045
BcgI	CGANNNNNNTGC	2 cut(s)	240, 274
BciT130I	CCWGG	4 cut(s)	533, 1506, 2259, 2750
BciVI	GTATCC	1 cut(s)	382
BclI	TGATCA	2 cut(s)	586, 2278
BcnI	CCSGG	1 cut(s)	2550
BcoDI	GTCTC	3 cut(s)	683, 813, 1023
BfaI	CTAG	7 cut(s)	681, 995, 1388, 1925, 1977, 2486, 2895
BfmI	CTRYAG	1 cut(s)	1047
BfrI	CTTAAG	2 cut(s)	362, 2656
BfuI	GTATCC	1 cut(s)	382
BglII	AGATCT	1 cut(s)	2086
BlpI	GCTNAGC	1 cut(s)	881
Bme1390I	CCNGG	5 cut(s)	533, 1506, 2259, 2550, 2750
Bme18I	GGWCC	4 cut(s)	269, 788, 2096, 2900
BmeT110I	CYCGRG	2 cut(s)	1890, 2190
BmgT120I	GGNCC	4 cut(s)	269, 788, 2096, 2900
BmiI	GGNNCC	2 cut(s)	765, 1680
BmrFI	CCNGG	5 cut(s)	533, 1506, 2259, 2550, 2750
BmrI	ACTGGG	5 cut(s)	960, 1677, 1780, 1821, 2895
BmsI	GCATC	8 cut(s)	301, 533, 1153, 1489, 1778, 2041, 2293, 2949
BmuI	ACTGGG	5 cut(s)	960, 1677, 1780, 1821, 2895
BoxI	GACNNNNGTC	1 cut(s)	1990
BpiI	GAAGAC	1 cut(s)	1452
BpmI	CTGGAG	3 cut(s)	107, 817, 1026
Bpu10I	CCTNAGC	1 cut(s)	2375
Bpu1102I	GCTNAGC	1 cut(s)	881
Bpu14I	TTCGAA	1 cut(s)	1694
BpuEI	CTTGAG	1 cut(s)	1388
BpuMI	CCSGG	1 cut(s)	2550
BsaAI	YACGTR	1 cut(s)	2567
BsaBI	GATNNNNATC	1 cut(s)	2283
BsaJI	CCNNGG	4 cut(s)	201, 531, 599, 1131
BsaWI	WCCGGW	2 cut(s)	1294, 2016
Bsc4I	CCNNNNNNNGG	8 cut(s)	207, 755, 785, 2016, 2258, 2264, 2305, 2909
Bse118I	RCCGGY	3 cut(s)	111, 354, 2016
Bse1I	ACTGG	8 cut(s)	292, 800, 966, 1683, 1786, 1827, 2209, 2890
Bse3DI	GCAATG	4 cut(s)	238, 1173, 1447, 2903
Bse8I	GATNNNNATC	1 cut(s)	2283
BseBI	CCWGG	4 cut(s)	533, 1506, 2259, 2750
BseDI	CCNNGG	4 cut(s)	201, 531, 599, 1131
BseGI	GGATG	4 cut(s)	1150, 1303, 2231, 2940
BseJI	GATNNNNATC	1 cut(s)	2283
BseLI	CCNNNNNNNGG	8 cut(s)	207, 755, 785, 2016, 2258, 2264, 2305, 2909
BseMI	GCAATG	4 cut(s)	238, 1173, 1447, 2903
BseMII	CTCAG	8 cut(s)	291, 824, 872, 1034, 1143, 1461, 1651, 2366
BseNI	ACTGG	8 cut(s)	292, 800, 966, 1683, 1786, 1827, 2209, 2890
BseRI	GAGGAG	5 cut(s)	1589, 1769, 2234, 2549, 2552
BseSI	GKGCMC	1 cut(s)	542
BseX3I	CGGCCG	1 cut(s)	141
BseXI	GCAGC	9 cut(s)	1045, 1337, 1666, 1982, 1985, 2207, 2529, 2683, 2938
BsgI	GTGCAG	1 cut(s)	3099
Bsh1236I	CGCG	2 cut(s)	36, 874
Bsh1285I	CGRYCG	1 cut(s)	144
BshFI	GGCC	5 cut(s)	143, 1214, 1597, 1874, 2327
BshTI	ACCGGT	1 cut(s)	2016
BsiEI	CGRYCG	1 cut(s)	144
BsiHKAI	GWGCWC	2 cut(s)	542, 2894
BsiHKCI	CYCGRG	2 cut(s)	1890, 2190
BsiSI	CCGG	6 cut(s)	12, 112, 355, 1295, 2017, 2549
BslFI	GGGAC	2 cut(s)	63, 1394
BslI	CCNNNNNNNGG	8 cut(s)	207, 755, 785, 2016, 2258, 2264, 2305, 2909
BsmAI	GTCTC	3 cut(s)	683, 813, 1023
BsmBI	CGTCTC	1 cut(s)	813
BsmFI	GGGAC	2 cut(s)	63, 1394
BsmI	GAATGC	1 cut(s)	253
BsnI	GGCC	5 cut(s)	143, 1214, 1597, 1874, 2327
BsoBI	CYCGRG	2 cut(s)	1890, 2190
Bsp119I	TTCGAA	1 cut(s)	1694
Bsp1286I	GDGCHC	2 cut(s)	542, 2894
Bsp1407I	TGTACA	1 cut(s)	1542
Bsp143I	GATC	8 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278, 2761
Bsp1720I	GCTNAGC	1 cut(s)	881
Bsp19I	CCATGG	2 cut(s)	599, 1131
BspACI	CCGC	7 cut(s)	115, 144, 208, 289, 2032, 2553, 2996
BspANI	GGCC	5 cut(s)	143, 1214, 1597, 1874, 2327
BspCNI	CTCAG	8 cut(s)	290, 823, 873, 1033, 1144, 1462, 1650, 2367
BspFNI	CGCG	2 cut(s)	36, 874
BspHI	TCATGA	2 cut(s)	1377, 2275
BspLI	GGNNCC	2 cut(s)	765, 1680
BspPI	GGATC	4 cut(s)	519, 1614, 1769, 2043
BspT104I	TTCGAA	1 cut(s)	1694
BspTI	CTTAAG	2 cut(s)	362, 2656
BsrDI	GCAATG	4 cut(s)	238, 1173, 1447, 2903
BsrFI	RCCGGY	3 cut(s)	111, 354, 2016
BsrGI	TGTACA	1 cut(s)	1542
BsrI	ACTGG	8 cut(s)	292, 800, 966, 1683, 1786, 1827, 2209, 2890
BssAI	RCCGGY	3 cut(s)	111, 354, 2016
BssECI	CCNNGG	4 cut(s)	201, 531, 599, 1131
BssMI	GATC	8 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278, 2761
BssSI	CACGAG	1 cut(s)	1988
BssT1I	CCWWGG	3 cut(s)	201, 599, 1131
Bst2BI	CACGAG	1 cut(s)	1988
Bst2UI	CCWGG	4 cut(s)	533, 1506, 2259, 2750
Bst6I	CTCTTC	1 cut(s)	1696
BstAFI	CTTAAG	2 cut(s)	362, 2656
BstAPI	GCANNNNNTGC	2 cut(s)	1331, 3077
BstAUI	TGTACA	1 cut(s)	1542
BstBAI	YACGTR	1 cut(s)	2567
BstBI	TTCGAA	1 cut(s)	1694
BstC8I	GCNNGC	6 cut(s)	131, 409, 432, 976, 1872, 1914
BstDEI	CTNAG	9 cut(s)	150, 277, 810, 881, 1020, 1152, 1470, 1637, 2375
BstDSI	CCRYGG	2 cut(s)	599, 1131
BstENI	CCTNNNNNAGG	1 cut(s)	2262
BstF5I	GGATG	4 cut(s)	1150, 1303, 2231, 2940
BstFNI	CGCG	2 cut(s)	36, 874
BstHHI	GCGC	4 cut(s)	36, 108, 729, 1325
BstKTI	GATC	8 cut(s)	514, 589, 1622, 1764, 2038, 2089, 2281, 2764
BstMAI	GTCTC	3 cut(s)	683, 813, 1023
BstMBI	GATC	8 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278, 2761
BstMCI	CGRYCG	1 cut(s)	144
BstMWI	GCNNNNNNNGC	7 cut(s)	88, 112, 1064, 1322, 1331, 2960, 3077
BstNI	CCWGG	4 cut(s)	533, 1506, 2259, 2750
BstNSI	RCATGY	6 cut(s)	354, 434, 1346, 1555, 2824, 3006
BstPAI	GACNNNNGTC	1 cut(s)	1990
BstSCI	CCNGG	5 cut(s)	531, 1504, 2257, 2548, 2748
BstSFI	CTRYAG	1 cut(s)	1047
BstSLI	GKGCMC	1 cut(s)	542
BstUI	CGCG	2 cut(s)	36, 874
BstV1I	GCAGC	9 cut(s)	1045, 1337, 1666, 1982, 1985, 2207, 2529, 2683, 2938
BstV2I	GAAGAC	1 cut(s)	1452
BstX2I	RGATCY	2 cut(s)	1619, 2086
BstXI	CCANNNNNNTGG	2 cut(s)	343, 1844
BstYI	RGATCY	2 cut(s)	1619, 2086
BstZI	CGGCCG	1 cut(s)	141
BsuI	GTATCC	1 cut(s)	382
BsuRI	GGCC	5 cut(s)	143, 1214, 1597, 1874, 2327
BtgI	CCRYGG	2 cut(s)	599, 1131
BtsCI	GGATG	4 cut(s)	1150, 1303, 2231, 2940
BtsIMutI	CAGTG	6 cut(s)	540, 793, 1282, 1834, 2806, 3082
Cac8I	GCNNGC	6 cut(s)	131, 409, 432, 976, 1872, 1914
CaiI	CAGNNNCTG	2 cut(s)	2725, 3086
CciI	TCATGA	2 cut(s)	1377, 2275
CfoI	GCGC	4 cut(s)	36, 108, 729, 1325
Cfr10I	RCCGGY	3 cut(s)	111, 354, 2016
Cfr13I	GGNCC	4 cut(s)	269, 788, 2096, 2900
CsiI	ACCWGGT	1 cut(s)	1504
Csp6I	GTAC	5 cut(s)	57, 1543, 1928, 2395, 2920
CspAI	ACCGGT	1 cut(s)	2016
CspCI	CAANNNNNGTGG	2 cut(s)	1587, 1622
CviQI	GTAC	5 cut(s)	57, 1543, 1928, 2395, 2920
DdeI	CTNAG	9 cut(s)	150, 277, 810, 881, 1020, 1152, 1470, 1637, 2375
DpnI	GATC	8 cut(s)	513, 588, 1621, 1763, 2037, 2088, 2280, 2763
DpnII	GATC	8 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278, 2761
DraI	TTTAAA	2 cut(s)	2167, 2622
DraIII	CACNNNGTG	2 cut(s)	914, 1735
EaeI	YGGCCR	1 cut(s)	141
EagI	CGGCCG	1 cut(s)	141
Eam1104I	CTCTTC	1 cut(s)	1696
EarI	CTCTTC	1 cut(s)	1696
EciI	GGCGGA	2 cut(s)	278, 2568
EclXI	CGGCCG	1 cut(s)	141
Eco130I	CCWWGG	3 cut(s)	201, 599, 1131
Eco147I	AGGCCT	1 cut(s)	2327
Eco32I	GATATC	2 cut(s)	1615, 2730
Eco47I	GGWCC	4 cut(s)	269, 788, 2096, 2900
Eco52I	CGGCCG	1 cut(s)	141
Eco57I	CTGAAG	4 cut(s)	151, 2100, 2702, 3038
Eco88I	CYCGRG	2 cut(s)	1890, 2190
EcoNI	CCTNNNNNAGG	1 cut(s)	2262
EcoRI	GAATTC	2 cut(s)	2310, 2340
EcoRII	CCWGG	4 cut(s)	531, 1504, 2257, 2748
EcoRV	GATATC	2 cut(s)	1615, 2730
EcoT14I	CCWWGG	3 cut(s)	201, 599, 1131
ErhI	CCWWGG	3 cut(s)	201, 599, 1131
Esp3I	CGTCTC	1 cut(s)	813
FalI	AAGNNNNNCTT	2 cut(s)	2073, 2105
FaqI	GGGAC	2 cut(s)	63, 1394
FauI	CCCGC	2 cut(s)	201, 2025
FauNDI	CATATG	1 cut(s)	229
FbaI	TGATCA	2 cut(s)	586, 2278
FblI	GTMKAC	1 cut(s)	1050
FokI	GGATG	4 cut(s)	1157, 1310, 2218, 2927
FspBI	CTAG	7 cut(s)	681, 995, 1388, 1925, 1977, 2486, 2895
GlaI	GCGC	4 cut(s)	35, 107, 728, 1324
GsuI	CTGGAG	3 cut(s)	107, 817, 1026
HaeIII	GGCC	5 cut(s)	143, 1214, 1597, 1874, 2327
HapII	CCGG	6 cut(s)	12, 112, 355, 1295, 2017, 2549
HhaI	GCGC	4 cut(s)	36, 108, 729, 1325
Hin6I	GCGC	4 cut(s)	34, 106, 727, 1323
HinP1I	GCGC	4 cut(s)	34, 106, 727, 1323
HincII	GTYRAC	2 cut(s)	2639, 2818
HindII	GTYRAC	2 cut(s)	2639, 2818
HindIII	AAGCTT	4 cut(s)	80, 593, 2842, 3020
HpaII	CCGG	6 cut(s)	12, 112, 355, 1295, 2017, 2549
HphI	GGTGA	6 cut(s)	406, 1151, 1678, 1696, 2483, 2606
Hpy99I	CGWCG	1 cut(s)	25
HpyAV	CCTTC	8 cut(s)	55, 502, 669, 989, 1097, 1101, 1603, 2427
HpyCH4IV	ACGT	4 cut(s)	753, 783, 2566, 2635
HpyF10VI	GCNNNNNNNGC	7 cut(s)	88, 112, 1064, 1322, 1331, 2960, 3077
HpyF3I	CTNAG	9 cut(s)	150, 277, 810, 881, 1020, 1152, 1470, 1637, 2375
HpySE526I	ACGT	4 cut(s)	753, 783, 2566, 2635
HspAI	GCGC	4 cut(s)	34, 106, 727, 1323
Ksp22I	TGATCA	2 cut(s)	586, 2278
Kzo9I	GATC	8 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278, 2761
Lsp1109I	GCAGC	9 cut(s)	1045, 1337, 1666, 1982, 1985, 2207, 2529, 2683, 2938
LweI	GCATC	8 cut(s)	301, 533, 1153, 1489, 1778, 2041, 2293, 2949
MabI	ACCWGGT	1 cut(s)	1504
MaeI	CTAG	7 cut(s)	681, 995, 1388, 1925, 1977, 2486, 2895
MaeII	ACGT	4 cut(s)	753, 783, 2566, 2635
MalI	GATC	8 cut(s)	513, 588, 1621, 1763, 2037, 2088, 2280, 2763
MboI	GATC	8 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278, 2761
MfeI	CAATTG	3 cut(s)	503, 1475, 1964
MflI	RGATCY	2 cut(s)	1619, 2086
MhlI	GDGCHC	2 cut(s)	542, 2894
MluI	ACGCGT	1 cut(s)	872
MlyI	GAGTC	3 cut(s)	269, 685, 2000
MmeI	TCCRAC	4 cut(s)	81, 543, 1059, 2259
MroXI	GAANNNNTTC	4 cut(s)	164, 1086, 2088, 2462
MslI	CAYNNNNRTG	5 cut(s)	341, 469, 924, 930, 1842
MspA1I	CMGCKG	1 cut(s)	1316
MspCI	CTTAAG	2 cut(s)	362, 2656
MspI	CCGG	6 cut(s)	12, 112, 355, 1295, 2017, 2549
MspR9I	CCNGG	5 cut(s)	533, 1506, 2259, 2550, 2750
MunI	CAATTG	3 cut(s)	503, 1475, 1964
Mva1269I	GAATGC	1 cut(s)	253
MvaI	CCWGG	4 cut(s)	533, 1506, 2259, 2750
MvnI	CGCG	2 cut(s)	36, 874
MwoI	GCNNNNNNNGC	7 cut(s)	88, 112, 1064, 1322, 1331, 2960, 3077
NciI	CCSGG	1 cut(s)	2550
NcoI	CCATGG	2 cut(s)	599, 1131
NdeI	CATATG	1 cut(s)	229
NdeII	GATC	8 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278, 2761
NlaIV	GGNNCC	2 cut(s)	765, 1680
NmeAIII	GCCGAG	1 cut(s)	119
NmuCI	GTSAC	5 cut(s)	1345, 1702, 1829, 2569, 2881
NspI	RCATGY	6 cut(s)	354, 434, 1346, 1555, 2824, 3006
NspV	TTCGAA	1 cut(s)	1694
PaeI	GCATGC	1 cut(s)	434
PaeR7I	CTCGAG	1 cut(s)	2190
PagI	TCATGA	2 cut(s)	1377, 2275
PceI	AGGCCT	1 cut(s)	2327
PciI	ACATGT	3 cut(s)	1342, 2820, 3002
PcsI	WCGNNNNNNNCGW	1 cut(s)	2035
PctI	GAATGC	1 cut(s)	253
PdmI	GAANNNNTTC	4 cut(s)	164, 1086, 2088, 2462
PflFI	GACNNNGTC	1 cut(s)	2582
PflMI	CCANNNNNTGG	3 cut(s)	785, 2305, 2909
PinAI	ACCGGT	1 cut(s)	2016
PleI	GAGTC	3 cut(s)	269, 685, 1999
PpsI	GAGTC	3 cut(s)	269, 685, 1999
Ppu21I	YACGTR	1 cut(s)	2567
PscI	ACATGT	3 cut(s)	1342, 2820, 3002
PshAI	GACNNNNGTC	1 cut(s)	1990
Psp1406I	AACGTT	1 cut(s)	783
Psp6I	CCWGG	4 cut(s)	531, 1504, 2257, 2748
PspGI	CCWGG	4 cut(s)	531, 1504, 2257, 2748
PspN4I	GGNNCC	2 cut(s)	765, 1680
PspPI	GGNCC	4 cut(s)	269, 788, 2096, 2900
PspXI	VCTCGAGB	1 cut(s)	2190
PstNI	CAGNNNCTG	2 cut(s)	2725, 3086
PsuI	RGATCY	2 cut(s)	1619, 2086
PsyI	GACNNNGTC	1 cut(s)	2582
PvuII	CAGCTG	1 cut(s)	1316
RsaI	GTAC	5 cut(s)	58, 1544, 1929, 2396, 2921
RsaNI	GTAC	5 cut(s)	57, 1543, 1928, 2395, 2920
RseI	CAYNNNNRTG	5 cut(s)	341, 469, 924, 930, 1842
Sau3AI	GATC	8 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278, 2761
Sau96I	GGNCC	4 cut(s)	269, 788, 2096, 2900
SchI	GAGTC	3 cut(s)	269, 685, 2000
ScrFI	CCNGG	5 cut(s)	533, 1506, 2259, 2550, 2750
SduI	GDGCHC	2 cut(s)	542, 2894
SexAI	ACCWGGT	1 cut(s)	1504
SfaNI	GCATC	8 cut(s)	301, 533, 1153, 1489, 1778, 2041, 2293, 2949
SfcI	CTRYAG	1 cut(s)	1047
Sfr274I	CTCGAG	1 cut(s)	2190
SfuI	TTCGAA	1 cut(s)	1694
SinI	GGWCC	4 cut(s)	269, 788, 2096, 2900
SlaI	CTCGAG	1 cut(s)	2190
SmiMI	CAYNNNNRTG	5 cut(s)	341, 469, 924, 930, 1842
SmlI	CTYRAG	4 cut(s)	362, 1367, 2190, 2656
SmoI	CTYRAG	4 cut(s)	362, 1367, 2190, 2656
SphI	GCATGC	1 cut(s)	434
SseBI	AGGCCT	1 cut(s)	2327
SsiI	CCGC	7 cut(s)	115, 144, 208, 289, 2032, 2553, 2996
SspI	AATATT	2 cut(s)	197, 1953
SspMI	CTAG	7 cut(s)	681, 995, 1388, 1925, 1977, 2486, 2895
StuI	AGGCCT	1 cut(s)	2327
StyD4I	CCNGG	5 cut(s)	531, 1504, 2257, 2548, 2748
StyI	CCWWGG	3 cut(s)	201, 599, 1131
TaiI	ACGT	4 cut(s)	756, 786, 2569, 2638
TaqI	TCGA	7 cut(s)	23, 309, 316, 425, 1694, 2092, 2191
TaqII	GACCGA	2 cut(s)	2113, 2997
TatI	WGTACW	2 cut(s)	1542, 2394
TauI	GCSGC	2 cut(s)	146, 2999
TscAI	CASTG	6 cut(s)	547, 800, 1282, 1834, 2806, 3082
TseFI	GTSAC	5 cut(s)	1345, 1702, 1829, 2569, 2881
TseI	GCWGC	9 cut(s)	1058, 1325, 1654, 1970, 1973, 2195, 2542, 2671, 2951
Tsp45I	GTSAC	5 cut(s)	1345, 1702, 1829, 2569, 2881
TspGWI	ACGGA	6 cut(s)	67, 816, 1415, 1908, 2546, 2782
TspRI	CASTG	6 cut(s)	547, 800, 1282, 1834, 2806, 3082
Tth111I	GACNNNGTC	1 cut(s)	2582
Van91I	CCANNNNNTGG	3 cut(s)	785, 2305, 2909
Vha464I	CTTAAG	2 cut(s)	362, 2656
VneI	GTGCAC	1 cut(s)	538
VpaK11BI	GGWCC	4 cut(s)	269, 788, 2096, 2900
XagI	CCTNNNNNAGG	1 cut(s)	2262
XapI	RAATTY	5 cut(s)	2123, 2310, 2340, 2867, 2876
XbaI	TCTAGA	1 cut(s)	2894
XceI	RCATGY	6 cut(s)	354, 434, 1346, 1555, 2824, 3006
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2951
XhoI	CTCGAG	1 cut(s)	2190
XmiI	GTMKAC	1 cut(s)	1050
XmnI	GAANNNNTTC	4 cut(s)	164, 1086, 2088, 2462
XspI	CTAG	7 cut(s)	681, 995, 1388, 1925, 1977, 2486, 2895

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.