Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0008558

Physical Location & Seq

Genomic Coordinates Forward (+)

58252503 .. 58263739

Gene Structure 11237 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG266300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2751 bp

ATGTTCTTCTCCGGCGATTCGTCGAATCGGAAGCGCGTGGATTTGGGGGGACGGAGTACGAAGGAGAGGGATAGGCAGAAGCTTCTGGAGCAAACGAGGTTGGAGCGCAACCGGCGGTTGTGGTTACGCCAGCAGAACTTCGCCGCAACTAAGATTCAGAAATGCTTCAGAGGGAGAAAGGTAGCAACATCTGAATATTCTAAGGTGCGGGAACAGTTCTATGGAACATATGGGAAACATTGCCAGAATGCAGATAAATCGTGTTTTGGTCCAGACTCAGACTTTCTCCGCCAGTTGCTTTTTTTCTTTGATGCTCGAAGTGTTGGCGACTTTTCCATTCTTGTGGAAACATGCCGGTTACTTCAGCAATTTGTCAGAGATACAGGGGATACGGTGAGCCTCTTTGCAGGCATGGATTATTCATCGAAGCATGCTTTGGTAAATTACAGAGTGAAGAAACTTGCATATCTGTGTATCAAGGCTGTTCATCAAAATAGAAATCAATTGAAGGATCAACTTTTTGCATCTCCCCAGGAGTGCACTGTGCCGACAACTTTATTGTTGGAAACAGTAGTCTTGTTGATTGATCATAAGCTTCCATGGGTTTGTAAGACAGTTGGCTATCTTCTGGAAAGAAAAGCATTTACCCTGTTTAGAGAGATTATTTTAACAGGAAGGGCTAGTATAGAGACTCATAATTGCATTGACAGAGTATCTTCATTGGAGCGCACTCTTGCTGTTGTAATTCCTCACGTTGGTCAGGAGCCATGTAACTGCCCAAACGTTGGTCCACACTGGAGTTTTTCGTCTCAGATTCTTACAATTCCTTTCTTGTGGAAGCTACTACCATATTTAAGAGGGGTTTTTGCAACACGTGGGCTGAGCCAACATTACATTCATCAGATGGCACTCTGTGTGCATAATCATGCTGATGTGCTTCCCAATGATACATCAGTTGAGTTACCCAGTTATGCCTGCCTTCTGGGAAATATACTAGATTCTTCCGGAGTTGCTCTGTCTCAGCCTGACTGCTCGTTTGAAATGGCTGTAGACCTTGCTGCTGTTGCAACATTCTTGTTGGAATCCCTTCCTTCAATAAAATCGTCAAATAGACAAAGCAAGGAAGATTCCATGGTGGGTGAGGATGATACTGAGGGAGATGATGCAATGGAAATATGTTTGAATAATGATTTGGAACGGCAGATTTGTGAGGCCATAGATTCACGCTTTCTTCTGCAATTTACAAATGTTTTGTTCGGAGGGATTTCACTTGTCAGTGATTCACACAAAGCACCGGATGATAGAGAGGTGTCAGCTGTTGGCGCAGCGTGTGCTTTTCTACATGTCACTTTCAACACCTTACCTCTTGAGAGAATCATGACTATCCTAGCTTATAGAACCGAACTTGTCCCTGTTCTATGGAACTTTATGAAACGGTGCAATGAGAACCAGAAATGGTCTTCATTGTCTGAGCAATTGGCATATCTACTGTCAGGAGATGCACCTGGTTGGCTATTACCTTTGGCAGTTTTCTGTCCTGTGTACAAGCACATGCTTACAATAGTTGATAATGAGGAGTTCTATGAACAGGAGAAGCCACTATCGTTGAAGGATATCAGATCCCTAATTATCATACTCAGACAGGCTCTATGGCAGCTTCTCTGGGTGAATCCTACGGCTCCCAGTAACTCTTCGAAATCTGTCACCAGCACCCCTGCAAAGAAGAAGCACCCTGTGGAGTTCATTCAACAGAGGGTTGGGATCGTAGCATCTGAACTCCTCTCCCAGTTGCAAGATTGGAACAATAGACGAGAGTTTACTTCCCCCAGTGACTTCCATGCTGATGGTGTCAATGATTTCTTCATTTCGCAGGCCGTGATAGAAAATACCCGAGCCAATGACATTTTGAAGCAAGCTCCGTTCCTAGTACCGTTCACAAGCAGAGTTAAAATATTCACTTCACAATTGGCAGCAGCTAGACAAAGACACGAGTCTAATTCTGTGTTTACCAGAAACCGGTTCAGAATACGGCGGGATCGTATCTTGGAAGATGCTTATAATCAGATGAGTGCATTGTCTGAAGAAGATCTTCGAGGACCGATTCGGGTAACATTTGTAAATGAATTTGGGGTTGAAGAAGCTGGAATTGATGGTGGTGGGATTTTTAAAGATTTCATGGAGAACATTACTCGAGCAGCCTTTGATGTCCAGTATGGTTTATTTAAGGAAACATCCGACCATCTCCTCTACCCTAATCCTGGTTCAGGAATGATTCATGATCAGCATCTCCAATTTTTCCACTTTCTGGGAATTCTTCTTGCAAAGGCCTTGTTTGAGGGAATTCTTGTTGATATTCCATTTGCAACGTTCTTCCTGAGCAAATTAAAGCAGAAGTACAACTACTTGAATGATTTACCTTCATTAGACCAAGAATTGTATCGCCACCTTATTTTCTTGAAGCATTTCAAAGGTGATATTTCAGAACTAGAACTATATTTTGTGATTGTAAATAATGAGTATGGGGAGCAAACGGAGGAAGAGCTGCTTCCGGGCGGAAAAAACCTACGTGTCACTAATGACAATGTCATTACTTTTATTCATCTTGTTGCCAATCACCGTTTAAATTATCAGATACGTCAACAAAGTTCTCATTTCTTAAGGGGGTTTCAGCAGCTTATACAGAAAGATTGGATTGATATGTTTAATGAGCATGAACTTCAGGTATTATGGTCTACCTTAATGCTTTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

HECT

Protein Analysis

916

Amino Acids

104.95

Weight (kDa)

6.34

Isoelectric Point (pI)

44.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HECT	PF00632	729 - 910	1.3e-42	HECT-domain (ubiquitin-transferase)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008558)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17205 AT3G17205 AT3G17205
fragaria_vesca	FvH4_4g20760 FvH4_4g20760 FvH4_4g20760 FvH4_4g20760
malus_domestica	MD13G1148100.v1.1 MD16G1148200.v1.1
prunus_persica	Prupe.1G111600_v2.0.a1 Prupe.1G111600_v2.0.a1
pyrus_communis	pycom13g12750 pycom16g12650
rosa_chinensis	RchiOBHm_Chr4g0426201
rosa_laevigata	RLG00000007311
rosa_multiflora	Rmu_sc0000730.1_g000025
rosa_roxburghii	Rroxscaffold_5G00368220
rosa_rugosa	Rorug04G0209500
rosa_samantha	Rh4AG266300 Rh4BG272400 Rh4CG285600 Rh4DG268700
rosa_wichuraiana	Rw4G023030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2058
AccB7I	CCANNNNNTGG	2 cut(s)	785, 2305
AccI	GTMKAC	2 cut(s)	1050, 2732
AccII	CGCG	1 cut(s)	36
AccIII	TCCGGA	1 cut(s)	1004
AciI	CCGC	6 cut(s)	115, 144, 208, 289, 2032, 2553
AclI	AACGTT	2 cut(s)	783, 2366
AclWI	GGATC	4 cut(s)	519, 1614, 1769, 2043
AcsI	RAATTY	3 cut(s)	2123, 2310, 2340
AcuI	CTGAAG	4 cut(s)	151, 347, 2100, 2702
AcvI	CACGTG	1 cut(s)	875
AdeI	CACNNNGTG	2 cut(s)	914, 1735
AfaI	GTAC	4 cut(s)	58, 1544, 1929, 2396
AfiI	CCNNNNNNNGG	6 cut(s)	755, 785, 2016, 2258, 2264, 2305
AflII	CTTAAG	1 cut(s)	2656
AflIII	ACRYGT	3 cut(s)	872, 1342, 2566
AgeI	ACCGGT	1 cut(s)	2016
AjnI	CCWGG	3 cut(s)	531, 1504, 2257
AjuI	GAANNNNNNNTTGG	6 cut(s)	419, 451, 879, 911, 1175, 1207
Alw21I	GWGCWC	1 cut(s)	542
Alw26I	GTCTC	3 cut(s)	683, 813, 1023
Alw44I	GTGCAC	1 cut(s)	538
AlwI	GGATC	4 cut(s)	519, 1614, 1769, 2043
Ama87I	CYCGRG	2 cut(s)	1890, 2190
Aor13HI	TCCGGA	1 cut(s)	1004
AoxI	GGCC	3 cut(s)	1212, 1872, 2325
ApaLI	GTGCAC	1 cut(s)	538
ApeKI	GCWGC	8 cut(s)	1058, 1325, 1654, 1970, 1973, 2195, 2542, 2671
ApoI	RAATTY	3 cut(s)	2123, 2310, 2340
ArsI	GACNNNNNNTTYG	2 cut(s)	1019, 1051
AsiGI	ACCGGT	1 cut(s)	2016
Asp700I	GAANNNNTTC	4 cut(s)	164, 1086, 2088, 2462
AspLEI	GCGC	4 cut(s)	36, 108, 729, 1325
AspS9I	GGNCC	3 cut(s)	269, 788, 2096
AsuC2I	CCSGG	1 cut(s)	2550
AsuHPI	GGTGA	6 cut(s)	406, 1151, 1678, 1696, 2483, 2606
AsuII	TTCGAA	1 cut(s)	1694
AvaI	CYCGRG	2 cut(s)	1890, 2190
AvaII	GGWCC	3 cut(s)	269, 788, 2096
BaeGI	GKGCMC	1 cut(s)	542
BaeI	ACNNNNGTAYC	2 cut(s)	939, 972
BarI	GAAGNNNNNNTAC	2 cut(s)	2384, 2416
BauI	CACGAG	1 cut(s)	1988
BbrPI	CACGTG	1 cut(s)	875
BbsI	GAAGAC	1 cut(s)	1452
Bbv12I	GWGCWC	1 cut(s)	542
BbvI	GCAGC	8 cut(s)	1045, 1337, 1666, 1982, 1985, 2207, 2529, 2683
BccI	CCATC	4 cut(s)	898, 1838, 2144, 2247
BceAI	ACGGC	4 cut(s)	1214, 1692, 1859, 2045
BcgI	CGANNNNNNTGC	2 cut(s)	240, 274
BciT130I	CCWGG	3 cut(s)	533, 1506, 2259
BciVI	GTATCC	1 cut(s)	382
BclI	TGATCA	2 cut(s)	586, 2278
BcnI	CCSGG	1 cut(s)	2550
BcoDI	GTCTC	3 cut(s)	683, 813, 1023
BfaI	CTAG	6 cut(s)	681, 995, 1388, 1925, 1977, 2486
BfmI	CTRYAG	1 cut(s)	1047
BfrI	CTTAAG	1 cut(s)	2656
BfuI	GTATCC	1 cut(s)	382
BglII	AGATCT	1 cut(s)	2086
BisI	GCNGC	9 cut(s)	144, 1059, 1326, 1655, 1971, 1974, 2196, 2543, 2672
BlpI	GCTNAGC	1 cut(s)	881
BlsI	GCNGC	9 cut(s)	145, 1060, 1327, 1656, 1972, 1975, 2197, 2544, 2673
Bme1390I	CCNGG	4 cut(s)	533, 1506, 2259, 2550
Bme18I	GGWCC	3 cut(s)	269, 788, 2096
BmeT110I	CYCGRG	2 cut(s)	1890, 2190
BmgT120I	GGNCC	3 cut(s)	269, 788, 2096
BmiI	GGNNCC	2 cut(s)	765, 1680
BmrFI	CCNGG	4 cut(s)	533, 1506, 2259, 2550
BmrI	ACTGGG	4 cut(s)	960, 1677, 1780, 1821
BmsI	GCATC	7 cut(s)	301, 533, 1153, 1489, 1778, 2041, 2293
BmuI	ACTGGG	4 cut(s)	960, 1677, 1780, 1821
BoxI	GACNNNNGTC	1 cut(s)	1990
BpiI	GAAGAC	1 cut(s)	1452
BpmI	CTGGAG	2 cut(s)	107, 817
Bpu10I	CCTNAGC	1 cut(s)	2375
Bpu1102I	GCTNAGC	1 cut(s)	881
Bpu14I	TTCGAA	1 cut(s)	1694
BpuEI	CTTGAG	1 cut(s)	1388
BpuMI	CCSGG	1 cut(s)	2550
BsaAI	YACGTR	2 cut(s)	875, 2567
BsaBI	GATNNNNATC	1 cut(s)	2283
BsaJI	CCNNGG	3 cut(s)	531, 599, 1131
BsaWI	WCCGGW	3 cut(s)	1004, 1294, 2016
Bsc4I	CCNNNNNNNGG	6 cut(s)	755, 785, 2016, 2258, 2264, 2305
Bse118I	RCCGGY	3 cut(s)	111, 354, 2016
Bse1I	ACTGG	7 cut(s)	292, 800, 966, 1683, 1786, 1827, 2209
Bse3DI	GCAATG	3 cut(s)	238, 1173, 1447
Bse8I	GATNNNNATC	1 cut(s)	2283
BseAI	TCCGGA	1 cut(s)	1004
BseBI	CCWGG	3 cut(s)	533, 1506, 2259
BseDI	CCNNGG	3 cut(s)	531, 599, 1131
BseGI	GGATG	3 cut(s)	1150, 1303, 2231
BseJI	GATNNNNATC	1 cut(s)	2283
BseLI	CCNNNNNNNGG	6 cut(s)	755, 785, 2016, 2258, 2264, 2305
BseMI	GCAATG	3 cut(s)	238, 1173, 1447
BseMII	CTCAG	8 cut(s)	291, 824, 872, 1034, 1143, 1461, 1651, 2366
BseNI	ACTGG	7 cut(s)	292, 800, 966, 1683, 1786, 1827, 2209
BseRI	GAGGAG	3 cut(s)	1589, 1769, 2234
BseSI	GKGCMC	1 cut(s)	542
BseXI	GCAGC	8 cut(s)	1045, 1337, 1666, 1982, 1985, 2207, 2529, 2683
Bsh1236I	CGCG	1 cut(s)	36
BshFI	GGCC	3 cut(s)	1214, 1874, 2327
BshTI	ACCGGT	1 cut(s)	2016
BsiHKAI	GWGCWC	1 cut(s)	542
BsiHKCI	CYCGRG	2 cut(s)	1890, 2190
BsiSI	CCGG	7 cut(s)	12, 112, 355, 1005, 1295, 2017, 2549
BslFI	GGGAC	2 cut(s)	63, 1394
BslI	CCNNNNNNNGG	6 cut(s)	755, 785, 2016, 2258, 2264, 2305
BsmAI	GTCTC	3 cut(s)	683, 813, 1023
BsmBI	CGTCTC	1 cut(s)	813
BsmFI	GGGAC	2 cut(s)	63, 1394
BsmI	GAATGC	1 cut(s)	253
BsnI	GGCC	3 cut(s)	1214, 1874, 2327
BsoBI	CYCGRG	2 cut(s)	1890, 2190
Bsp119I	TTCGAA	1 cut(s)	1694
Bsp1286I	GDGCHC	1 cut(s)	542
Bsp13I	TCCGGA	1 cut(s)	1004
Bsp1407I	TGTACA	1 cut(s)	1542
Bsp143I	GATC	7 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278
Bsp1720I	GCTNAGC	1 cut(s)	881
Bsp19I	CCATGG	2 cut(s)	599, 1131
BspACI	CCGC	6 cut(s)	115, 144, 208, 289, 2032, 2553
BspANI	GGCC	3 cut(s)	1214, 1874, 2327
BspCNI	CTCAG	8 cut(s)	290, 823, 873, 1033, 1144, 1462, 1650, 2367
BspEI	TCCGGA	1 cut(s)	1004
BspFNI	CGCG	1 cut(s)	36
BspHI	TCATGA	2 cut(s)	1377, 2275
BspLI	GGNNCC	2 cut(s)	765, 1680
BspPI	GGATC	4 cut(s)	519, 1614, 1769, 2043
BspQI	GCTCTTC	1 cut(s)	2532
BspT104I	TTCGAA	1 cut(s)	1694
BspTI	CTTAAG	1 cut(s)	2656
BsrDI	GCAATG	3 cut(s)	238, 1173, 1447
BsrFI	RCCGGY	3 cut(s)	111, 354, 2016
BsrGI	TGTACA	1 cut(s)	1542
BsrI	ACTGG	7 cut(s)	292, 800, 966, 1683, 1786, 1827, 2209
BssAI	RCCGGY	3 cut(s)	111, 354, 2016
BssECI	CCNNGG	3 cut(s)	531, 599, 1131
BssMI	GATC	7 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278
BssSI	CACGAG	1 cut(s)	1988
BssT1I	CCWWGG	2 cut(s)	599, 1131
Bst2BI	CACGAG	1 cut(s)	1988
Bst2UI	CCWGG	3 cut(s)	533, 1506, 2259
Bst4CI	ACNGT	9 cut(s)	216, 394, 544, 571, 616, 1437, 1491, 1932, 2618
Bst6I	CTCTTC	2 cut(s)	1696, 2532
BstAFI	CTTAAG	1 cut(s)	2656
BstAPI	GCANNNNNTGC	1 cut(s)	1331
BstAUI	TGTACA	1 cut(s)	1542
BstBAI	YACGTR	2 cut(s)	875, 2567
BstBI	TTCGAA	1 cut(s)	1694
BstC8I	GCNNGC	6 cut(s)	131, 409, 432, 976, 1872, 1914
BstDSI	CCRYGG	2 cut(s)	599, 1131
BstENI	CCTNNNNNAGG	1 cut(s)	2262
BstF5I	GGATG	3 cut(s)	1150, 1303, 2231
BstFNI	CGCG	1 cut(s)	36
BstHHI	GCGC	4 cut(s)	36, 108, 729, 1325
BstKTI	GATC	7 cut(s)	514, 589, 1622, 1764, 2038, 2089, 2281
BstMAI	GTCTC	3 cut(s)	683, 813, 1023
BstMBI	GATC	7 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278
BstMWI	GCNNNNNNNGC	5 cut(s)	88, 112, 1064, 1322, 1331
BstNI	CCWGG	3 cut(s)	533, 1506, 2259
BstNSI	RCATGY	4 cut(s)	354, 434, 1346, 1555
BstPAI	GACNNNNGTC	1 cut(s)	1990
BstSCI	CCNGG	4 cut(s)	531, 1504, 2257, 2548
BstSFI	CTRYAG	1 cut(s)	1047
BstSLI	GKGCMC	1 cut(s)	542
BstUI	CGCG	1 cut(s)	36
BstV1I	GCAGC	8 cut(s)	1045, 1337, 1666, 1982, 1985, 2207, 2529, 2683
BstV2I	GAAGAC	1 cut(s)	1452
BstX2I	RGATCY	2 cut(s)	1619, 2086
BstXI	CCANNNNNNTGG	2 cut(s)	343, 1844
BstYI	RGATCY	2 cut(s)	1619, 2086
BsuI	GTATCC	1 cut(s)	382
BsuRI	GGCC	3 cut(s)	1214, 1874, 2327
BtgI	CCRYGG	2 cut(s)	599, 1131
BtsCI	GGATG	3 cut(s)	1150, 1303, 2231
BtsIMutI	CAGTG	4 cut(s)	540, 793, 1282, 1834
Cac8I	GCNNGC	6 cut(s)	131, 409, 432, 976, 1872, 1914
CciI	TCATGA	2 cut(s)	1377, 2275
CfoI	GCGC	4 cut(s)	36, 108, 729, 1325
Cfr10I	RCCGGY	3 cut(s)	111, 354, 2016
Cfr13I	GGNCC	3 cut(s)	269, 788, 2096
CsiI	ACCWGGT	1 cut(s)	1504
Csp6I	GTAC	4 cut(s)	57, 1543, 1928, 2395
CspAI	ACCGGT	1 cut(s)	2016
CspCI	CAANNNNNGTGG	2 cut(s)	1587, 1622
CviQI	GTAC	4 cut(s)	57, 1543, 1928, 2395
DpnI	GATC	7 cut(s)	513, 588, 1621, 1763, 2037, 2088, 2280
DpnII	GATC	7 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278
DraI	TTTAAA	2 cut(s)	2167, 2622
DraIII	CACNNNGTG	2 cut(s)	914, 1735
Eam1104I	CTCTTC	2 cut(s)	1696, 2532
EarI	CTCTTC	2 cut(s)	1696, 2532
EciI	GGCGGA	2 cut(s)	278, 2568
Eco130I	CCWWGG	2 cut(s)	599, 1131
Eco147I	AGGCCT	1 cut(s)	2327
Eco32I	GATATC	1 cut(s)	1615
Eco47I	GGWCC	3 cut(s)	269, 788, 2096
Eco57I	CTGAAG	4 cut(s)	151, 347, 2100, 2702
Eco72I	CACGTG	1 cut(s)	875
Eco88I	CYCGRG	2 cut(s)	1890, 2190
EcoNI	CCTNNNNNAGG	1 cut(s)	2262
EcoRI	GAATTC	2 cut(s)	2310, 2340
EcoRII	CCWGG	3 cut(s)	531, 1504, 2257
EcoRV	GATATC	1 cut(s)	1615
EcoT14I	CCWWGG	2 cut(s)	599, 1131
ErhI	CCWWGG	2 cut(s)	599, 1131
Esp3I	CGTCTC	1 cut(s)	813
FalI	AAGNNNNNCTT	4 cut(s)	2073, 2105, 2529, 2561
FaqI	GGGAC	2 cut(s)	63, 1394
FauI	CCCGC	2 cut(s)	201, 2025
FauNDI	CATATG	1 cut(s)	229
FbaI	TGATCA	2 cut(s)	586, 2278
FblI	GTMKAC	2 cut(s)	1050, 2732
Fnu4HI	GCNGC	9 cut(s)	144, 1059, 1326, 1655, 1971, 1974, 2196, 2543, 2672
FokI	GGATG	3 cut(s)	1157, 1310, 2218
Fsp4HI	GCNGC	9 cut(s)	144, 1059, 1326, 1655, 1971, 1974, 2196, 2543, 2672
FspBI	CTAG	6 cut(s)	681, 995, 1388, 1925, 1977, 2486
GlaI	GCGC	4 cut(s)	35, 107, 728, 1324
GluI	GCNGC	9 cut(s)	144, 1059, 1326, 1655, 1971, 1974, 2196, 2543, 2672
GsuI	CTGGAG	2 cut(s)	107, 817
HaeIII	GGCC	3 cut(s)	1214, 1874, 2327
HapII	CCGG	7 cut(s)	12, 112, 355, 1005, 1295, 2017, 2549
HhaI	GCGC	4 cut(s)	36, 108, 729, 1325
Hin6I	GCGC	4 cut(s)	34, 106, 727, 1323
HinP1I	GCGC	4 cut(s)	34, 106, 727, 1323
HincII	GTYRAC	1 cut(s)	2639
HindII	GTYRAC	1 cut(s)	2639
HindIII	AAGCTT	2 cut(s)	80, 593
HpaII	CCGG	7 cut(s)	12, 112, 355, 1005, 1295, 2017, 2549
HphI	GGTGA	6 cut(s)	406, 1151, 1678, 1696, 2483, 2606
Hpy166II	GTNNAC	9 cut(s)	540, 791, 1051, 1543, 1818, 1935, 2007, 2639, 2733
Hpy8I	GTNNAC	9 cut(s)	540, 791, 1051, 1543, 1818, 1935, 2007, 2639, 2733
Hpy99I	CGWCG	1 cut(s)	25
HpyAV	CCTTC	8 cut(s)	55, 502, 669, 989, 1097, 1101, 1603, 2427
HpyCH4III	ACNGT	9 cut(s)	216, 394, 544, 571, 616, 1437, 1491, 1932, 2618
HpyCH4IV	ACGT	6 cut(s)	753, 783, 874, 2366, 2566, 2635
HpyF10VI	GCNNNNNNNGC	5 cut(s)	88, 112, 1064, 1322, 1331
HpySE526I	ACGT	6 cut(s)	753, 783, 874, 2366, 2566, 2635
HspAI	GCGC	4 cut(s)	34, 106, 727, 1323
Kpn2I	TCCGGA	1 cut(s)	1004
Ksp22I	TGATCA	2 cut(s)	586, 2278
Kzo9I	GATC	7 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278
LguI	GCTCTTC	1 cut(s)	2532
LmnI	GCTCC	7 cut(s)	88, 103, 724, 763, 1684, 1921, 2524
Lsp1109I	GCAGC	8 cut(s)	1045, 1337, 1666, 1982, 1985, 2207, 2529, 2683
LweI	GCATC	7 cut(s)	301, 533, 1153, 1489, 1778, 2041, 2293
MabI	ACCWGGT	1 cut(s)	1504
MaeI	CTAG	6 cut(s)	681, 995, 1388, 1925, 1977, 2486
MaeII	ACGT	6 cut(s)	753, 783, 874, 2366, 2566, 2635
MalI	GATC	7 cut(s)	513, 588, 1621, 1763, 2037, 2088, 2280
MboI	GATC	7 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278
MfeI	CAATTG	3 cut(s)	503, 1475, 1964
MflI	RGATCY	2 cut(s)	1619, 2086
MhlI	GDGCHC	1 cut(s)	542
MlyI	GAGTC	3 cut(s)	269, 685, 2000
MmeI	TCCRAC	4 cut(s)	81, 543, 1059, 2259
MroI	TCCGGA	1 cut(s)	1004
MroXI	GAANNNNTTC	4 cut(s)	164, 1086, 2088, 2462
MslI	CAYNNNNRTG	5 cut(s)	341, 469, 924, 930, 1842
MspA1I	CMGCKG	1 cut(s)	1316
MspCI	CTTAAG	1 cut(s)	2656
MspI	CCGG	7 cut(s)	12, 112, 355, 1005, 1295, 2017, 2549
MspR9I	CCNGG	4 cut(s)	533, 1506, 2259, 2550
MunI	CAATTG	3 cut(s)	503, 1475, 1964
Mva1269I	GAATGC	1 cut(s)	253
MvaI	CCWGG	3 cut(s)	533, 1506, 2259
MvnI	CGCG	1 cut(s)	36
MwoI	GCNNNNNNNGC	5 cut(s)	88, 112, 1064, 1322, 1331
NciI	CCSGG	1 cut(s)	2550
NcoI	CCATGG	2 cut(s)	599, 1131
NdeI	CATATG	1 cut(s)	229
NdeII	GATC	7 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278
NlaIV	GGNNCC	2 cut(s)	765, 1680
NmuCI	GTSAC	4 cut(s)	1345, 1702, 1829, 2569
NspI	RCATGY	4 cut(s)	354, 434, 1346, 1555
NspV	TTCGAA	1 cut(s)	1694
PaeI	GCATGC	1 cut(s)	434
PaeR7I	CTCGAG	1 cut(s)	2190
PagI	TCATGA	2 cut(s)	1377, 2275
PceI	AGGCCT	1 cut(s)	2327
PciI	ACATGT	1 cut(s)	1342
PciSI	GCTCTTC	1 cut(s)	2532
PcsI	WCGNNNNNNNCGW	1 cut(s)	2035
PctI	GAATGC	1 cut(s)	253
PdmI	GAANNNNTTC	4 cut(s)	164, 1086, 2088, 2462
PflFI	GACNNNGTC	1 cut(s)	2582
PflMI	CCANNNNNTGG	2 cut(s)	785, 2305
PinAI	ACCGGT	1 cut(s)	2016
PkrI	GCNGC	9 cut(s)	145, 1060, 1327, 1656, 1972, 1975, 2197, 2544, 2673
PleI	GAGTC	3 cut(s)	269, 685, 1999
PmaCI	CACGTG	1 cut(s)	875
PmlI	CACGTG	1 cut(s)	875
PpsI	GAGTC	3 cut(s)	269, 685, 1999
Ppu21I	YACGTR	2 cut(s)	875, 2567
PscI	ACATGT	1 cut(s)	1342
PshAI	GACNNNNGTC	1 cut(s)	1990
PsiI	TTATAA	1 cut(s)	2058
Psp1406I	AACGTT	2 cut(s)	783, 2366
Psp6I	CCWGG	3 cut(s)	531, 1504, 2257
PspCI	CACGTG	1 cut(s)	875
PspGI	CCWGG	3 cut(s)	531, 1504, 2257
PspN4I	GGNNCC	2 cut(s)	765, 1680
PspPI	GGNCC	3 cut(s)	269, 788, 2096
PspXI	VCTCGAGB	1 cut(s)	2190
PsuI	RGATCY	2 cut(s)	1619, 2086
PsyI	GACNNNGTC	1 cut(s)	2582
PvuII	CAGCTG	1 cut(s)	1316
RsaI	GTAC	4 cut(s)	58, 1544, 1929, 2396
RsaNI	GTAC	4 cut(s)	57, 1543, 1928, 2395
RseI	CAYNNNNRTG	5 cut(s)	341, 469, 924, 930, 1842
SapI	GCTCTTC	1 cut(s)	2532
SatI	GCNGC	9 cut(s)	144, 1059, 1326, 1655, 1971, 1974, 2196, 2543, 2672
Sau3AI	GATC	7 cut(s)	511, 586, 1619, 1761, 2035, 2086, 2278
Sau96I	GGNCC	3 cut(s)	269, 788, 2096
SchI	GAGTC	3 cut(s)	269, 685, 2000
ScrFI	CCNGG	4 cut(s)	533, 1506, 2259, 2550
SduI	GDGCHC	1 cut(s)	542
SexAI	ACCWGGT	1 cut(s)	1504
SfaNI	GCATC	7 cut(s)	301, 533, 1153, 1489, 1778, 2041, 2293
SfcI	CTRYAG	1 cut(s)	1047
Sfr274I	CTCGAG	1 cut(s)	2190
SfuI	TTCGAA	1 cut(s)	1694
SinI	GGWCC	3 cut(s)	269, 788, 2096
SlaI	CTCGAG	1 cut(s)	2190
SmiMI	CAYNNNNRTG	5 cut(s)	341, 469, 924, 930, 1842
SmlI	CTYRAG	3 cut(s)	1367, 2190, 2656
SmoI	CTYRAG	3 cut(s)	1367, 2190, 2656
SphI	GCATGC	1 cut(s)	434
SseBI	AGGCCT	1 cut(s)	2327
SsiI	CCGC	6 cut(s)	115, 144, 208, 289, 2032, 2553
SspI	AATATT	2 cut(s)	197, 1953
SspMI	CTAG	6 cut(s)	681, 995, 1388, 1925, 1977, 2486
StuI	AGGCCT	1 cut(s)	2327
StyD4I	CCNGG	4 cut(s)	531, 1504, 2257, 2548
StyI	CCWWGG	2 cut(s)	599, 1131
TaaI	ACNGT	9 cut(s)	216, 394, 544, 571, 616, 1437, 1491, 1932, 2618
TaiI	ACGT	6 cut(s)	756, 786, 877, 2369, 2569, 2638
TaqI	TCGA	6 cut(s)	23, 316, 425, 1694, 2092, 2191
TaqII	GACCGA	1 cut(s)	2113
TatI	WGTACW	2 cut(s)	1542, 2394
TauI	GCSGC	1 cut(s)	146
TscAI	CASTG	4 cut(s)	547, 800, 1282, 1834
TseFI	GTSAC	4 cut(s)	1345, 1702, 1829, 2569
TseI	GCWGC	8 cut(s)	1058, 1325, 1654, 1970, 1973, 2195, 2542, 2671
Tsp45I	GTSAC	4 cut(s)	1345, 1702, 1829, 2569
TspGWI	ACGGA	3 cut(s)	67, 1908, 2546
TspRI	CASTG	4 cut(s)	547, 800, 1282, 1834
Tth111I	GACNNNGTC	1 cut(s)	2582
Van91I	CCANNNNNTGG	2 cut(s)	785, 2305
Vha464I	CTTAAG	1 cut(s)	2656
VneI	GTGCAC	1 cut(s)	538
VpaK11BI	GGWCC	3 cut(s)	269, 788, 2096
XagI	CCTNNNNNAGG	1 cut(s)	2262
XapI	RAATTY	3 cut(s)	2123, 2310, 2340
XceI	RCATGY	4 cut(s)	354, 434, 1346, 1555
XhoI	CTCGAG	1 cut(s)	2190
XmiI	GTMKAC	2 cut(s)	1050, 2732
XmnI	GAANNNNTTC	4 cut(s)	164, 1086, 2088, 2462
XspI	CTAG	6 cut(s)	681, 995, 1388, 1925, 1977, 2486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.