Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0008558

Physical Location & Seq

Genomic Coordinates Reverse (-)

8896697 .. 8904535

Gene Structure 7839 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g12650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

ATGTTCTTCTCGGGCGATTCATCGACTCGGAAGCGAGTTGATTTGGGAGGGCGGAGTACGAAGGAAAGGGACAGGCAGAAGCTTTTGGAGCAGACAAGGTTGGAACGCAACCGCCGGTCGTGGATACGGCAGCAGAACTTCGCCGCGTTGAAAATCCAGAAATGCTTTAGAGGGAGGAAGGTGGCAGCGGCTGAACATTCTAAGGTGCGTGAGCAGTTCTATGGAAGATATGGGAGGCATTGCCAGAATGTGGACAGATTTAGTTTTGGTCCTGATTCAGAGTTTCTCCGCCAGTTACTTTTCTTCTTTGATGCTCGAAGTGTTGGTGATTTTTCTATCCTTGTGGAGACGTGCCGGTTGCTTCATCAATTTGTCAGAGAGACAGGGGATATTATTAGCCTCGTTGCAGGCATGGATTATTCGTCCAAGCATGCTTTGGTGAAACACAGAGTGAAGCAACTTGCATATATCTGTATGAAGGCTGTTCATCAAAACAGAAATCAGTTGAAGGATCAACTTTTTGCAGCCCCTGAGGAGGCGACCACGTCAACAACTTTACTGTTAGAAGCATTAGTTTTATTGATAGATCCCAAGCTTCCATGGGCTTGTGAGACAGTTGGCTATCTTTTCCAGAGAAAGGCTTTTATCCTGTATAGAGAGATTATTTTAACAGGAAAGGAAAGTATAAAGACTCATAACTACATTGGCAGAGTGTCATCGTTGGAGCGTAGTCTTGCTGTTGTAATTTCTCACATTGGTCAGGAGCCATGTACGTGCCCAAACTGGATCGATCCACATTGGAGTTTTTCATCTCAAATTCTTACAGTTCCATTTGTATGGAAGCTATTCCCCTACTTAGGAGAGGTTTTTGCAAGACGAGGGCTGAGCCAGCATTACATTAATCAGATGTCACTCTGTGTGAAAAATCATGCTGATGTACTTCCGAAAGATGCATCAGTTGAGTTACCCGGTTATGCATGCCTTATTGGAAATATATTGGAATCTTCCGGGGTCGCTCTGTCTCAGACTGATTGCTCATTTCAAATGGCTTTAGACCTTGCTGGCGTCGCAACATTCTTGTTGGAGGCCCTTCCTTCAATGAAATCATCAAATAGAGAAAGCAAAGAAGATTCTATGGGTGATGATGATATGATTGAAGGAGATGATATAGAAACAATGGAAGTTTGTTTGAATAATGATTTAGAACGACAGATATGTGATGCCATAGATCCGCGCTTTCTTCTACAATTAACAAATGTTTTGTTTGGAGGGATTTCACTTTCCAGTGGCTTGCACCACAGACCGGATGATAAAGAGGTGTCAGCTGTTGGTGCGGCTTGTGCTTTTCTACATGTTACTTTAAACACCTTACCTCTGGAGAGAATCATGACTATACTAGCTTATAGAACGGAACTTGTTTCGGTGCTTTGGAATTTTATGAAACGGTGCCATGAAAACCAGAAATGGCAGTCAGTATCTGAGCAGTTGGCATATCTGCTGCCCGGAGATCCACCTTGCTGGCTATTACCTTTGGCTGTATTCTGTCCTGTGTACAAGCACATGCTTACACTAGTTGATAATGAGGAGTTCTATGAGCAGGAGAAGCCACTATCATTGAAGGATATCAGATACCTAGTTATCATACTCAGACAGGCCCTATGGCAACTTCTTTGGGTGAATCCTACGGCTCCTAGTAATTCTTCGAAACCTGTCACAACCACCTCTTCTAAGAAGCACCCTGTGGAGTTAATTCAACATAGAGTTAGCATTGTAGCTTCTGAACTCCTCTCCCAGTTGCAAGATTGGAACAATAGACGAGAATTCACATCCCCCAGTGACTTTCATGCTGATGGTGTTAATGAGTTCTTTATTACACAGGCCGTAATAGAAAATACCCGAGCAAATGACATCATGAAGCAAGCTCCCTTCCTGGTACCATTCACAAGCAGAGTTAAAATATTCACTTCACAATTGGCAGCAGCTAGACAAAGACATGAGTCAAATTCTGTGTTTACCAGAAACCGATTCAGAATACGGCGGGATCGTATCTTGGAAGATGCTTATGACCAAATGAGTGCGCTGTCTGAAGATCGATCTTCGGGGACCGATTCGTGTAACGTTTGTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

HECT

Protein Analysis

710

Amino Acids

81.01

Weight (kDa)

7.82

Isoelectric Point (pI)

49.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008558)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G17205 AT3G17205 AT3G17205
fragaria_vesca	FvH4_4g20760 FvH4_4g20760 FvH4_4g20760 FvH4_4g20760
malus_domestica	MD13G1148100.v1.1 MD16G1148200.v1.1
prunus_persica	Prupe.1G111600_v2.0.a1 Prupe.1G111600_v2.0.a1
pyrus_communis	pycom13g12750 pycom16g12650
rosa_chinensis	RchiOBHm_Chr4g0426201
rosa_laevigata	RLG00000007311
rosa_multiflora	Rmu_sc0000730.1_g000025
rosa_roxburghii	Rroxscaffold_5G00368220
rosa_rugosa	Rorug04G0209500
rosa_samantha	Rh4AG266300 Rh4BG272400 Rh4CG285600 Rh4DG268700
rosa_wichuraiana	Rw4G023030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1933
AccB1I	GGYRCC	2 cut(s)	1446, 1933
AccB7I	CCANNNNNTGG	1 cut(s)	250
AccII	CGCG	2 cut(s)	146, 1234
AciI	CCGC	8 cut(s)	52, 112, 144, 188, 289, 1232, 1334, 2038
AclI	AACGTT	1 cut(s)	2118
AclWI	GGATC	7 cut(s)	519, 581, 785, 794, 1223, 1502, 2049
AcsI	RAATTY	4 cut(s)	816, 1432, 1820, 2002
AcuI	CTGAAG	1 cut(s)	2106
AcyI	GRCGYC	1 cut(s)	1065
AdeI	CACNNNGTG	3 cut(s)	451, 917, 1741
AfaI	GTAC	5 cut(s)	58, 772, 939, 1553, 1935
AfiI	CCNNNNNNNGG	5 cut(s)	250, 535, 637, 857, 1303
AflIII	ACRYGT	1 cut(s)	1351
AgsI	TTSAA	8 cut(s)	151, 508, 1043, 1098, 1157, 1192, 1618, 1754
AhlI	ACTAGT	1 cut(s)	1570
AjiI	CACGTC	2 cut(s)	351, 546
AjnI	CCWGG	1 cut(s)	1929
AluBI	AGCT	8 cut(s)	82, 595, 844, 1325, 1400, 1775, 1922, 1982
AluI	AGCT	8 cut(s)	82, 595, 844, 1325, 1400, 1775, 1922, 1982
Alw26I	GTCTC	4 cut(s)	341, 374, 605, 1026
AlwI	GGATC	7 cut(s)	519, 581, 785, 794, 1223, 1502, 2049
AlwNI	CAGNNNCTG	3 cut(s)	191, 530, 1478
Ama87I	CYCGRG	2 cut(s)	10, 1896
AoxI	GGCC	3 cut(s)	1086, 1653, 1878
ApeKI	GCWGC	6 cut(s)	130, 185, 524, 1498, 1976, 1979
ApoI	RAATTY	4 cut(s)	816, 1432, 1820, 2002
AseI	ATTAAT	1 cut(s)	900
Asp700I	GAANNNNTTC	1 cut(s)	845
Asp718I	GGTACC	1 cut(s)	1933
AspLEI	GCGC	2 cut(s)	1236, 2080
AspS9I	GGNCC	4 cut(s)	269, 1087, 1654, 2103
AsuC2I	CCSGG	3 cut(s)	969, 1009, 1503
AsuHPI	GGTGA	4 cut(s)	338, 451, 1151, 1687
AsuII	TTCGAA	1 cut(s)	1703
AvaI	CYCGRG	2 cut(s)	10, 1896
AvaII	GGWCC	2 cut(s)	269, 2103
AxyI	CCTNAGG	1 cut(s)	531
BaeGI	GKGCMC	1 cut(s)	779
BanI	GGYRCC	2 cut(s)	1446, 1933
BbvI	GCAGC	6 cut(s)	142, 197, 536, 1485, 1988, 1991
BccI	CCATC	1 cut(s)	1844
BceAI	ACGGC	4 cut(s)	143, 1701, 1865, 2051
BciT130I	CCWGG	1 cut(s)	1931
BciVI	GTATCC	1 cut(s)	117
BcnI	CCSGG	3 cut(s)	969, 1009, 1503
BcoDI	GTCTC	4 cut(s)	341, 374, 605, 1026
BcuI	ACTAGT	1 cut(s)	1570
BfaI	CTAG	5 cut(s)	1397, 1571, 1634, 1692, 1983
BfuI	GTATCC	1 cut(s)	117
BisI	GCNGC	9 cut(s)	131, 144, 186, 189, 525, 1335, 1499, 1977, 1980
BlpI	GCTNAGC	1 cut(s)	884
BlsI	GCNGC	9 cut(s)	132, 145, 187, 190, 526, 1336, 1500, 1978, 1981
Bme1390I	CCNGG	4 cut(s)	969, 1009, 1503, 1931
Bme18I	GGWCC	2 cut(s)	269, 2103
BmeT110I	CYCGRG	2 cut(s)	10, 1896
BmgBI	CACGTC	2 cut(s)	351, 546
BmgT120I	GGNCC	4 cut(s)	269, 1087, 1654, 2103
BmiI	GGNNCC	5 cut(s)	765, 1448, 1689, 1935, 2104
BmrFI	CCNGG	4 cut(s)	969, 1009, 1503, 1931
BmrI	ACTGGG	2 cut(s)	1786, 1827
BmsI	GCATC	5 cut(s)	301, 940, 962, 1210, 2047
BmuI	ACTGGG	2 cut(s)	1786, 1827
BoxI	GACNNNNGTC	1 cut(s)	1996
BpmI	CTGGAG	1 cut(s)	1397
Bpu1102I	GCTNAGC	1 cut(s)	884
Bpu14I	TTCGAA	1 cut(s)	1703
BpuMI	CCSGG	3 cut(s)	969, 1009, 1503
Bsa29I	ATCGAT	2 cut(s)	789, 2092
BsaAI	YACGTR	1 cut(s)	774
BsaHI	GRCGYC	1 cut(s)	1065
BsaJI	CCNNGG	2 cut(s)	599, 1008
BsaWI	WCCGGW	1 cut(s)	1303
Bsc4I	CCNNNNNNNGG	5 cut(s)	250, 535, 637, 857, 1303
Bse118I	RCCGGY	2 cut(s)	114, 354
Bse1I	ACTGG	5 cut(s)	292, 788, 1284, 1792, 1833
Bse21I	CCTNAGG	1 cut(s)	531
Bse3DI	GCAATG	1 cut(s)	238
BseBI	CCWGG	1 cut(s)	1931
BseCI	ATCGAT	2 cut(s)	789, 2092
BseDI	CCNNGG	2 cut(s)	599, 1008
BseGI	GGATG	2 cut(s)	1312, 1826
BseLI	CCNNNNNNNGG	5 cut(s)	250, 535, 637, 857, 1303
BseMI	GCAATG	1 cut(s)	238
BseMII	CTCAG	5 cut(s)	522, 875, 1037, 1470, 1660
BseNI	ACTGG	5 cut(s)	292, 788, 1284, 1792, 1833
BseRI	GAGGAG	3 cut(s)	548, 1598, 1775
BseSI	GKGCMC	1 cut(s)	779
BseXI	GCAGC	6 cut(s)	142, 197, 536, 1485, 1988, 1991
Bsh1236I	CGCG	2 cut(s)	146, 1234
Bsh1285I	CGRYCG	1 cut(s)	119
BshFI	GGCC	3 cut(s)	1088, 1655, 1880
BshNI	GGYRCC	2 cut(s)	1446, 1933
BshVI	ATCGAT	2 cut(s)	789, 2092
BsiEI	CGRYCG	1 cut(s)	119
BsiHKCI	CYCGRG	2 cut(s)	10, 1896
BsiSI	CCGG	6 cut(s)	115, 355, 969, 1008, 1304, 1503
BslFI	GGGAC	2 cut(s)	83, 2116
BslI	CCNNNNNNNGG	5 cut(s)	250, 535, 637, 857, 1303
BsmAI	GTCTC	4 cut(s)	341, 374, 605, 1026
BsmBI	CGTCTC	1 cut(s)	341
BsmFI	GGGAC	2 cut(s)	83, 2116
BsnI	GGCC	3 cut(s)	1088, 1655, 1880
BsoBI	CYCGRG	2 cut(s)	10, 1896
Bsp119I	TTCGAA	1 cut(s)	1703
Bsp1286I	GDGCHC	1 cut(s)	779
Bsp1407I	TGTACA	1 cut(s)	1551
Bsp143I	GATC	9 cut(s)	511, 586, 786, 790, 1228, 1507, 2041, 2089, 2093
Bsp1720I	GCTNAGC	1 cut(s)	884
Bsp19I	CCATGG	1 cut(s)	599
BspACI	CCGC	8 cut(s)	52, 112, 144, 188, 289, 1232, 1334, 2038
BspANI	GGCC	3 cut(s)	1088, 1655, 1880
BspCNI	CTCAG	5 cut(s)	523, 876, 1036, 1471, 1659
BspDI	ATCGAT	2 cut(s)	789, 2092
BspFNI	CGCG	2 cut(s)	146, 1234
BspHI	TCATGA	2 cut(s)	1386, 1911
BspLI	GGNNCC	5 cut(s)	765, 1448, 1689, 1935, 2104
BspPI	GGATC	7 cut(s)	519, 581, 785, 794, 1223, 1502, 2049
BspT104I	TTCGAA	1 cut(s)	1703
BspT107I	GGYRCC	2 cut(s)	1446, 1933
BsrDI	GCAATG	1 cut(s)	238
BsrFI	RCCGGY	2 cut(s)	114, 354
BsrGI	TGTACA	1 cut(s)	1551
BsrI	ACTGG	5 cut(s)	292, 788, 1284, 1792, 1833
BssAI	RCCGGY	2 cut(s)	114, 354
BssECI	CCNNGG	2 cut(s)	599, 1008
BssMI	GATC	9 cut(s)	511, 586, 786, 790, 1228, 1507, 2041, 2089, 2093
BssNI	GRCGYC	1 cut(s)	1065
BssT1I	CCWWGG	1 cut(s)	599
Bst2UI	CCWGG	1 cut(s)	1931
Bst4CI	ACNGT	4 cut(s)	561, 616, 826, 1446
Bst6I	CTCTTC	1 cut(s)	1729
BstACI	GRCGYC	1 cut(s)	1065
BstAUI	TGTACA	1 cut(s)	1551
BstBAI	YACGTR	1 cut(s)	774
BstBI	TTCGAA	1 cut(s)	1703
BstC8I	GCNNGC	8 cut(s)	409, 432, 890, 979, 1063, 1292, 1520, 1920
BstDEI	CTNAG	8 cut(s)	201, 531, 856, 884, 1023, 1479, 1646, 1728
BstDSI	CCRYGG	1 cut(s)	599
BstF5I	GGATG	2 cut(s)	1312, 1826
BstFNI	CGCG	2 cut(s)	146, 1234
BstHHI	GCGC	2 cut(s)	1236, 2080
BstKTI	GATC	9 cut(s)	514, 589, 789, 793, 1231, 1510, 2044, 2092, 2096
BstMAI	GTCTC	4 cut(s)	341, 374, 605, 1026
BstMBI	GATC	9 cut(s)	511, 586, 786, 790, 1228, 1507, 2041, 2089, 2093
BstMCI	CGRYCG	1 cut(s)	119
BstMWI	GCNNNNNNNGC	6 cut(s)	88, 889, 1067, 1331, 1340, 1603
BstNI	CCWGG	1 cut(s)	1931
BstNSI	RCATGY	4 cut(s)	434, 981, 1355, 1564
BstPAI	GACNNNNGTC	1 cut(s)	1996
BstSCI	CCNGG	4 cut(s)	967, 1007, 1501, 1929
BstSLI	GKGCMC	1 cut(s)	779
BstUI	CGCG	2 cut(s)	146, 1234
BstV1I	GCAGC	6 cut(s)	142, 197, 536, 1485, 1988, 1991
BstX2I	RGATCY	3 cut(s)	586, 1228, 1507
BstXI	CCANNNNNNTGG	2 cut(s)	837, 1518
BstYI	RGATCY	3 cut(s)	586, 1228, 1507
Bsu15I	ATCGAT	2 cut(s)	789, 2092
Bsu36I	CCTNAGG	1 cut(s)	531
BsuI	GTATCC	1 cut(s)	117
BsuRI	GGCC	3 cut(s)	1088, 1655, 1880
BsuTUI	ATCGAT	2 cut(s)	789, 2092
BtgI	CCRYGG	1 cut(s)	599
BtrI	CACGTC	2 cut(s)	351, 546
BtsCI	GGATG	2 cut(s)	1312, 1826
BtsIMutI	CAGTG	2 cut(s)	1291, 1840
Cac8I	GCNNGC	8 cut(s)	409, 432, 890, 979, 1063, 1292, 1520, 1920
CaiI	CAGNNNCTG	3 cut(s)	191, 530, 1478
CciI	TCATGA	2 cut(s)	1386, 1911
CfoI	GCGC	2 cut(s)	1236, 2080
Cfr10I	RCCGGY	2 cut(s)	114, 354
Cfr13I	GGNCC	4 cut(s)	269, 1087, 1654, 2103
ClaI	ATCGAT	2 cut(s)	789, 2092
CseI	GACGC	1 cut(s)	1054
Csp6I	GTAC	5 cut(s)	57, 771, 938, 1552, 1934
CspCI	CAANNNNNGTGG	2 cut(s)	1596, 1631
CviQI	GTAC	5 cut(s)	57, 771, 938, 1552, 1934
DdeI	CTNAG	8 cut(s)	201, 531, 856, 884, 1023, 1479, 1646, 1728
DpnI	GATC	9 cut(s)	513, 588, 788, 792, 1230, 1509, 2043, 2091, 2095
DpnII	GATC	9 cut(s)	511, 586, 786, 790, 1228, 1507, 2041, 2089, 2093
DraI	TTTAAA	1 cut(s)	1362
DraIII	CACNNNGTG	3 cut(s)	451, 917, 1741
Eam1104I	CTCTTC	1 cut(s)	1729
EarI	CTCTTC	1 cut(s)	1729
EciI	GGCGGA	2 cut(s)	67, 278
Eco130I	CCWWGG	1 cut(s)	599
Eco32I	GATATC	1 cut(s)	1624
Eco47I	GGWCC	2 cut(s)	269, 2103
Eco57I	CTGAAG	1 cut(s)	2106
Eco81I	CCTNAGG	1 cut(s)	531
Eco88I	CYCGRG	2 cut(s)	10, 1896
EcoO109I	RGGNCCY	2 cut(s)	1087, 1654
EcoRI	GAATTC	1 cut(s)	1820
EcoRII	CCWGG	1 cut(s)	1929
EcoRV	GATATC	1 cut(s)	1624
EcoT14I	CCWWGG	1 cut(s)	599
EcoT22I	ATGCAT	2 cut(s)	955, 979
ErhI	CCWWGG	1 cut(s)	599
Esp3I	CGTCTC	1 cut(s)	341
FaqI	GGGAC	2 cut(s)	83, 2116
FauI	CCCGC	1 cut(s)	2031
Fnu4HI	GCNGC	9 cut(s)	131, 144, 186, 189, 525, 1335, 1499, 1977, 1980
FokI	GGATG	2 cut(s)	1319, 1813
Fsp4HI	GCNGC	9 cut(s)	131, 144, 186, 189, 525, 1335, 1499, 1977, 1980
FspBI	CTAG	5 cut(s)	1397, 1571, 1634, 1692, 1983
GlaI	GCGC	2 cut(s)	1235, 2079
GluI	GCNGC	9 cut(s)	131, 144, 186, 189, 525, 1335, 1499, 1977, 1980
GsuI	CTGGAG	1 cut(s)	1397
HaeIII	GGCC	3 cut(s)	1088, 1655, 1880
HapII	CCGG	6 cut(s)	115, 355, 969, 1008, 1304, 1503
HgaI	GACGC	1 cut(s)	1054
HhaI	GCGC	2 cut(s)	1236, 2080
Hin1I	GRCGYC	1 cut(s)	1065
Hin6I	GCGC	2 cut(s)	1234, 2078
HinP1I	GCGC	2 cut(s)	1234, 2078
HincII	GTYRAC	1 cut(s)	549
HindII	GTYRAC	1 cut(s)	549
HindIII	AAGCTT	2 cut(s)	80, 593
HpaII	CCGG	6 cut(s)	115, 355, 969, 1008, 1304, 1503
HphI	GGTGA	4 cut(s)	338, 451, 1151, 1687
Hpy166II	GTNNAC	4 cut(s)	253, 549, 1552, 2013
Hpy188III	TCNNGA	7 cut(s)	157, 272, 631, 761, 1376, 1387, 1912
Hpy8I	GTNNAC	4 cut(s)	253, 549, 1552, 2013
Hpy99I	CGWCG	1 cut(s)	1070
HpyAV	CCTTC	9 cut(s)	55, 172, 472, 502, 1100, 1104, 1151, 1612, 1936
HpyCH4III	ACNGT	4 cut(s)	561, 616, 826, 1446
HpyCH4IV	ACGT	4 cut(s)	350, 545, 773, 2118
HpyCH4V	TGCA	8 cut(s)	407, 464, 524, 872, 953, 977, 1294, 1798
HpyF10VI	GCNNNNNNNGC	6 cut(s)	88, 889, 1067, 1331, 1340, 1603
HpyF3I	CTNAG	8 cut(s)	201, 531, 856, 884, 1023, 1479, 1646, 1728
HpySE526I	ACGT	4 cut(s)	350, 545, 773, 2118
Hsp92I	GRCGYC	1 cut(s)	1065
HspAI	GCGC	2 cut(s)	1234, 2078
KpnI	GGTACC	1 cut(s)	1937
Kzo9I	GATC	9 cut(s)	511, 586, 786, 790, 1228, 1507, 2041, 2089, 2093
LmnI	GCTCC	5 cut(s)	88, 724, 763, 1693, 1927
Lsp1109I	GCAGC	6 cut(s)	142, 197, 536, 1485, 1988, 1991
LweI	GCATC	5 cut(s)	301, 940, 962, 1210, 2047
MaeI	CTAG	5 cut(s)	1397, 1571, 1634, 1692, 1983
MaeII	ACGT	4 cut(s)	350, 545, 773, 2118
MaeIII	GTNAC	7 cut(s)	294, 909, 963, 1354, 1711, 1835, 2114
MalI	GATC	9 cut(s)	513, 588, 788, 792, 1230, 1509, 2043, 2091, 2095
MboI	GATC	9 cut(s)	511, 586, 786, 790, 1228, 1507, 2041, 2089, 2093
MfeI	CAATTG	1 cut(s)	1970
MflI	RGATCY	3 cut(s)	586, 1228, 1507
MhlI	GDGCHC	1 cut(s)	779
MlyI	GAGTC	3 cut(s)	19, 685, 2006
MmeI	TCCRAC	3 cut(s)	81, 702, 1062
Mph1103I	ATGCAT	2 cut(s)	955, 979
MroXI	GAANNNNTTC	1 cut(s)	845
MseI	TTAA	7 cut(s)	668, 900, 1250, 1361, 1748, 1857, 1953
MslI	CAYNNNNRTG	4 cut(s)	772, 835, 933, 1848
MspA1I	CMGCKG	2 cut(s)	188, 1325
MspI	CCGG	6 cut(s)	115, 355, 969, 1008, 1304, 1503
MspR9I	CCNGG	4 cut(s)	969, 1009, 1503, 1931
MunI	CAATTG	1 cut(s)	1970
MvaI	CCWGG	1 cut(s)	1931
MvnI	CGCG	2 cut(s)	146, 1234
MwoI	GCNNNNNNNGC	6 cut(s)	88, 889, 1067, 1331, 1340, 1603
NciI	CCSGG	3 cut(s)	969, 1009, 1503
NcoI	CCATGG	1 cut(s)	599
NdeII	GATC	9 cut(s)	511, 586, 786, 790, 1228, 1507, 2041, 2089, 2093
NlaIV	GGNNCC	5 cut(s)	765, 1448, 1689, 1935, 2104
NmuCI	GTSAC	3 cut(s)	909, 1711, 1835
NsiI	ATGCAT	2 cut(s)	955, 979
NspI	RCATGY	4 cut(s)	434, 981, 1355, 1564
NspV	TTCGAA	1 cut(s)	1703
PaeI	GCATGC	2 cut(s)	434, 981
PagI	TCATGA	2 cut(s)	1386, 1911
PciI	ACATGT	1 cut(s)	1351
PcsI	WCGNNNNNNNCGW	1 cut(s)	2041
PdmI	GAANNNNTTC	1 cut(s)	845
PfeI	GAWTC	8 cut(s)	17, 275, 1001, 1130, 1383, 1678, 2025, 2108
PflFI	GACNNNGTC	1 cut(s)	544
PflMI	CCANNNNNTGG	1 cut(s)	250
PkrI	GCNGC	9 cut(s)	132, 145, 187, 190, 526, 1336, 1500, 1978, 1981
PleI	GAGTC	3 cut(s)	19, 685, 2005
PpsI	GAGTC	3 cut(s)	19, 685, 2005
Ppu21I	YACGTR	1 cut(s)	774
PscI	ACATGT	1 cut(s)	1351
PshAI	GACNNNNGTC	1 cut(s)	1996
PshBI	ATTAAT	1 cut(s)	900
Psp1406I	AACGTT	1 cut(s)	2118
Psp6I	CCWGG	1 cut(s)	1929
PspGI	CCWGG	1 cut(s)	1929
PspN4I	GGNNCC	5 cut(s)	765, 1448, 1689, 1935, 2104
PspPI	GGNCC	4 cut(s)	269, 1087, 1654, 2103
PstNI	CAGNNNCTG	3 cut(s)	191, 530, 1478
PsuI	RGATCY	3 cut(s)	586, 1228, 1507
PsyI	GACNNNGTC	1 cut(s)	544
PvuII	CAGCTG	1 cut(s)	1325
RsaI	GTAC	5 cut(s)	58, 772, 939, 1553, 1935
RsaNI	GTAC	5 cut(s)	57, 771, 938, 1552, 1934
RseI	CAYNNNNRTG	4 cut(s)	772, 835, 933, 1848
SaqAI	TTAA	7 cut(s)	668, 900, 1250, 1361, 1748, 1857, 1953
SatI	GCNGC	9 cut(s)	131, 144, 186, 189, 525, 1335, 1499, 1977, 1980
Sau3AI	GATC	9 cut(s)	511, 586, 786, 790, 1228, 1507, 2041, 2089, 2093
Sau96I	GGNCC	4 cut(s)	269, 1087, 1654, 2103
SchI	GAGTC	3 cut(s)	19, 685, 2006
ScrFI	CCNGG	4 cut(s)	969, 1009, 1503, 1931
SduI	GDGCHC	1 cut(s)	779
SfaNI	GCATC	5 cut(s)	301, 940, 962, 1210, 2047
SfuI	TTCGAA	1 cut(s)	1703
SinI	GGWCC	2 cut(s)	269, 2103
SmiMI	CAYNNNNRTG	4 cut(s)	772, 835, 933, 1848
SpeI	ACTAGT	1 cut(s)	1570
SphI	GCATGC	2 cut(s)	434, 981
SsiI	CCGC	8 cut(s)	52, 112, 144, 188, 289, 1232, 1334, 2038
SspI	AATATT	1 cut(s)	1959
SspMI	CTAG	5 cut(s)	1397, 1571, 1634, 1692, 1983
StyD4I	CCNGG	4 cut(s)	967, 1007, 1501, 1929
StyI	CCWWGG	1 cut(s)	599
TaaI	ACNGT	4 cut(s)	561, 616, 826, 1446
TaiI	ACGT	4 cut(s)	353, 548, 776, 2121
TaqI	TCGA	5 cut(s)	23, 316, 789, 1703, 2092
TaqII	GACCGA	1 cut(s)	2120
TatI	WGTACW	2 cut(s)	937, 1551
TauI	GCSGC	3 cut(s)	146, 191, 1337
TfiI	GAWTC	8 cut(s)	17, 275, 1001, 1130, 1383, 1678, 2025, 2108
Tru1I	TTAA	7 cut(s)	668, 900, 1250, 1361, 1748, 1857, 1953
Tru9I	TTAA	7 cut(s)	668, 900, 1250, 1361, 1748, 1857, 1953
TscAI	CASTG	2 cut(s)	1291, 1840
TseFI	GTSAC	3 cut(s)	909, 1711, 1835
TseI	GCWGC	6 cut(s)	130, 185, 524, 1498, 1976, 1979
Tsp45I	GTSAC	3 cut(s)	909, 1711, 1835
TspGWI	ACGGA	1 cut(s)	1424
TspRI	CASTG	2 cut(s)	1291, 1840
Tth111I	GACNNNGTC	1 cut(s)	544
Van91I	CCANNNNNTGG	1 cut(s)	250
VpaK11BI	GGWCC	2 cut(s)	269, 2103
VspI	ATTAAT	1 cut(s)	900
XapI	RAATTY	4 cut(s)	816, 1432, 1820, 2002
XceI	RCATGY	4 cut(s)	434, 981, 1355, 1564
XcmI	CCANNNNNNNNNTGG	1 cut(s)	433
XmnI	GAANNNNTTC	1 cut(s)	845
XspI	CTAG	5 cut(s)	1397, 1571, 1634, 1692, 1983
Zsp2I	ATGCAT	2 cut(s)	955, 979

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.