E3 ubiquitin-protein ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G17205 AT3G17205 AT3G17205 |
| fragaria_vesca | FvH4_4g20760 FvH4_4g20760 FvH4_4g20760 FvH4_4g20760 |
| malus_domestica | MD13G1148100.v1.1 MD16G1148200.v1.1 |
| prunus_persica | Prupe.1G111600_v2.0.a1 Prupe.1G111600_v2.0.a1 |
| pyrus_communis | pycom13g12750 pycom16g12650 |
| rosa_chinensis | RchiOBHm_Chr4g0426201 |
| rosa_laevigata | RLG00000007311 |
| rosa_multiflora | Rmu_sc0000730.1_g000025 |
| rosa_roxburghii | Rroxscaffold_5G00368220 |
| rosa_rugosa | Rorug04G0209500 |
| rosa_samantha | Rh4AG266300 Rh4BG272400 Rh4CG285600 Rh4DG268700 |
| rosa_wichuraiana | Rw4G023030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 53 |
| AciI | CCGC | 1 cut(s) | 275 |
| AclWI | GGATC | 1 cut(s) | 313 |
| AcsI | RAATTY | 1 cut(s) | 149 |
| AfaI | GTAC | 1 cut(s) | 202 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 44, 153 |
| AgsI | TTSAA | 4 cut(s) | 194, 245, 287, 339 |
| AjnI | CCWGG | 2 cut(s) | 213, 228 |
| AluBI | AGCT | 2 cut(s) | 175, 283 |
| AluI | AGCT | 2 cut(s) | 175, 283 |
| AlwI | GGATC | 1 cut(s) | 313 |
| ApoI | RAATTY | 1 cut(s) | 149 |
| AseI | ATTAAT | 1 cut(s) | 87 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 28 |
| AsuHPI | GGTGA | 1 cut(s) | 311 |
| BccI | CCATC | 3 cut(s) | 128, 290, 337 |
| BciT130I | CCWGG | 2 cut(s) | 215, 230 |
| BfmI | CTRYAG | 1 cut(s) | 176 |
| BfuAI | ACCTGC | 1 cut(s) | 53 |
| Bme1390I | CCNGG | 2 cut(s) | 215, 230 |
| BmrFI | CCNGG | 2 cut(s) | 215, 230 |
| BpmI | CTGGAG | 2 cut(s) | 98, 284 |
| BsaJI | CCNNGG | 2 cut(s) | 213, 228 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 44, 153 |
| Bse1I | ACTGG | 1 cut(s) | 267 |
| BseBI | CCWGG | 2 cut(s) | 215, 230 |
| BseDI | CCNNGG | 2 cut(s) | 213, 228 |
| BseGI | GGATG | 1 cut(s) | 348 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 44, 153 |
| BseMII | CTCAG | 2 cut(s) | 71, 90 |
| BseNI | ACTGG | 1 cut(s) | 267 |
| BseRI | GAGGAG | 1 cut(s) | 6 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 44, 153 |
| BsmI | GAATGC | 1 cut(s) | 233 |
| Bsp1407I | TGTACA | 1 cut(s) | 200 |
| Bsp143I | GATC | 1 cut(s) | 318 |
| BspACI | CCGC | 1 cut(s) | 275 |
| BspCNI | CTCAG | 2 cut(s) | 70, 91 |
| BspHI | TCATGA | 1 cut(s) | 315 |
| BspMI | ACCTGC | 1 cut(s) | 53 |
| BspPI | GGATC | 1 cut(s) | 313 |
| BsrGI | TGTACA | 1 cut(s) | 200 |
| BsrI | ACTGG | 1 cut(s) | 267 |
| BssECI | CCNNGG | 2 cut(s) | 213, 228 |
| BssMI | GATC | 1 cut(s) | 318 |
| Bst2UI | CCWGG | 2 cut(s) | 215, 230 |
| BstAUI | TGTACA | 1 cut(s) | 200 |
| BstDEI | CTNAG | 2 cut(s) | 57, 99 |
| BstF5I | GGATG | 1 cut(s) | 348 |
| BstKTI | GATC | 1 cut(s) | 321 |
| BstMBI | GATC | 1 cut(s) | 318 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 11, 274 |
| BstNI | CCWGG | 2 cut(s) | 215, 230 |
| BstSCI | CCNGG | 2 cut(s) | 213, 228 |
| BstSFI | CTRYAG | 1 cut(s) | 176 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 329 |
| BtsCI | GGATG | 1 cut(s) | 348 |
| BveI | ACCTGC | 1 cut(s) | 53 |
| CciI | TCATGA | 1 cut(s) | 315 |
| Csp6I | GTAC | 1 cut(s) | 201 |
| CviAII | CATG | 1 cut(s) | 316 |
| CviJI | RGCY | 5 cut(s) | 5, 79, 175, 227, 283 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 79, 175, 227, 283 |
| CviQI | GTAC | 1 cut(s) | 201 |
| DdeI | CTNAG | 2 cut(s) | 57, 99 |
| DpnI | GATC | 1 cut(s) | 320 |
| DpnII | GATC | 1 cut(s) | 318 |
| EcoRII | CCWGG | 2 cut(s) | 213, 228 |
| FaeI | CATG | 1 cut(s) | 319 |
| FaiI | YATR | 3 cut(s) | 126, 221, 317 |
| FatI | CATG | 1 cut(s) | 315 |
| GsuI | CTGGAG | 2 cut(s) | 98, 284 |
| Hin1II | CATG | 1 cut(s) | 319 |
| HinfI | GANTC | 1 cut(s) | 41 |
| HphI | GGTGA | 1 cut(s) | 311 |
| Hpy166II | GTNNAC | 1 cut(s) | 203 |
| Hpy188I | TCNGA | 1 cut(s) | 34 |
| Hpy188III | TCNNGA | 4 cut(s) | 45, 68, 115, 316 |
| Hpy8I | GTNNAC | 1 cut(s) | 203 |
| HpyAV | CCTTC | 1 cut(s) | 239 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 11, 274 |
| HpyF3I | CTNAG | 2 cut(s) | 57, 99 |
| Hsp92II | CATG | 1 cut(s) | 319 |
| Kzo9I | GATC | 1 cut(s) | 318 |
| LmnI | GCTCC | 3 cut(s) | 19, 265, 280 |
| MaeIII | GTNAC | 1 cut(s) | 49 |
| MalI | GATC | 1 cut(s) | 320 |
| MboI | GATC | 1 cut(s) | 318 |
| MboII | GAAGA | 3 cut(s) | 21, 174, 305 |
| MluCI | AATT | 2 cut(s) | 149, 194 |
| MnlI | CCTC | 2 cut(s) | 27, 337 |
| MroXI | GAANNNNTTC | 1 cut(s) | 28 |
| MseI | TTAA | 2 cut(s) | 87, 258 |
| MspR9I | CCNGG | 2 cut(s) | 215, 230 |
| Mva1269I | GAATGC | 1 cut(s) | 233 |
| MvaI | CCWGG | 2 cut(s) | 215, 230 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 11, 274 |
| NdeII | GATC | 1 cut(s) | 318 |
| NlaIII | CATG | 1 cut(s) | 319 |
| PagI | TCATGA | 1 cut(s) | 315 |
| PctI | GAATGC | 1 cut(s) | 233 |
| PdmI | GAANNNNTTC | 1 cut(s) | 28 |
| PfeI | GAWTC | 1 cut(s) | 41 |
| PshBI | ATTAAT | 1 cut(s) | 87 |
| Psp6I | CCWGG | 2 cut(s) | 213, 228 |
| PspGI | CCWGG | 2 cut(s) | 213, 228 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 193, 225 |
| RsaI | GTAC | 1 cut(s) | 202 |
| RsaNI | GTAC | 1 cut(s) | 201 |
| SaqAI | TTAA | 2 cut(s) | 87, 258 |
| Sau3AI | GATC | 1 cut(s) | 318 |
| ScrFI | CCNGG | 2 cut(s) | 215, 230 |
| SetI | ASST | 3 cut(s) | 67, 177, 285 |
| SfcI | CTRYAG | 1 cut(s) | 176 |
| SmlI | CTYRAG | 1 cut(s) | 18 |
| SmoI | CTYRAG | 1 cut(s) | 18 |
| Sse9I | AATT | 2 cut(s) | 149, 194 |
| SsiI | CCGC | 1 cut(s) | 275 |
| StyD4I | CCNGG | 2 cut(s) | 213, 228 |
| TasI | AATT | 2 cut(s) | 149, 194 |
| TatI | WGTACW | 1 cut(s) | 200 |
| TfiI | GAWTC | 1 cut(s) | 41 |
| Tru1I | TTAA | 2 cut(s) | 87, 258 |
| Tru9I | TTAA | 2 cut(s) | 87, 258 |
| TspDTI | ATGAA | 1 cut(s) | 236 |
| VspI | ATTAAT | 1 cut(s) | 87 |
| XapI | RAATTY | 1 cut(s) | 149 |
| XmnI | GAANNNNTTC | 1 cut(s) | 28 |