Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0006693

Physical Location & Seq

Genomic Coordinates Reverse (-)

29408378 .. 29411510

Gene Structure 3133 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g29120.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2484 bp

ATGCTCAATCACATCCATCAATGGAAGAAACCCATCCAATTTCTTCAAATTTCTCGAACCTTCTCTTCCCTCATCTTCACTAAACCCCCATCCTTCGCCGCAAAGCCCGCCGTTGATCCCGCCGCCGGCCCAAGCAGCACTGCCAATGTCGCCGAGCTCATCACCGGCCTGAGAACCTTGGGTTTGGGTCGAATTAGAGGTGACCATTACTATAGTAACATTATTTCGAGCTTGAATCAGACCCAGGTGGATCTTATTATCGAAAGGTTGAACCTTGAGGACCCTGAATCGGGTTTTGGGTTCTTCAATTTGTTGAGGAATGAGTATGGTTTTCGGCATTCGAGGGCTTCGAGTTTCGCAGTTGCTCATGTTTTAGGGGGGAGGAGGCGGTTTGAGGAGTTGCGGTTGGTTATGAAGCAAATGGTGAAGGAGGAAGGTTCTGGTTCTGCAACATCACTTTGTGAGCTGCTATTGAGTAGATTTAGGGACTGGGGCTCGAGTGGTGTGGTGTGGGATGTTTTGGCGTTTTCGTATTCAAGAAGTGAGATGGTTTATGATGCCCTGACTGTTCTTGCTAAGATGAAAGATCTGAATTTGAGAGTTTCCACTTCGACGTATAATTGCTTGTTGCATAATTTAAGGCACACGGATATCATGTGGAATGTGTATGATGCAATTAAGGAAAGTGGAACTCCTGAGAATGAGTACACTAGTTCTATACTTGTAGATGGACTGTGTGAACAAGCCAGCATACAAGATGCGGTTTCATTTCTCATGGAAGCTCAGAGGAAGGAGAGTGGGCCTTCAGTTGTTTCGGTCAATACCATTATGTCGAGGTTCTGTAAATTGGGTTTTGTGGATATTGCGAAGTCGTTTTTTTGTATGATATTCAAGTATGGACTACTTCCTGATTCATACAGTTATAATATTCTTATTCATGGGCTGTGTGTAGCAGGTTCTTTGGAAGAAGCTTTGGAGTTTACACAAGACATGGAGAGGCACGGGCTACACCCTGACACCGTGACCTACAATATTCTTTGTAAAGGGTTTCGTCTGCTTGGTTTAATGAATGGAGCTCAGCAGGTCATTCAGAAAATGCTGGTTAAAGGGTTGAATCCTGATCATGTTACGTATACAATTCTAATTTGTGGGCACTGCCATTCTGGCAATATTGAGGAAGCACTTAAGCTGCGGGAAGAGATGCTTTCAAGGGGTTTTCAGTTGAGTGTCATCTTATATAGCGTACTGCTCAGCAGTTTGTGTAAAAGTGGACGAATAGAAGAAGCATTGAGGTTGCATTATGAGATGGAAGCTGTTGGCTTGGAACCAGATCTTATAACATGTTCCATTCTGATTCATGGGCTATGCAAGCAAGGTACTGTTCAAAGGGCTGTTCAAATATATAGAGAAATGTACTTGAAGAGAATAATACCCCACTATTCTGCACATCGAGCAATTCTTTTAGGTCTGCGCAAGAGAGGGGATATATCTGAGGCAAGGAAGTATTTTGATGTTCTAACAACAATCACAGAGGACATTGTGTTGTATAATATTATGATGGATGGATATGTAAAGCTTGGTAATATTGCAGCAGCCTTACACTTATATGAACAAACAGTTGAAAAAGGAATAACTCCTACTGTTGTCACTTTCAATACGCTTATGTATGGTCTCTGCAAAAGTGGAAAACTAATTGAGGCCAAACGGATGTTGACTGCCATTGAGCTGCATGGAATGCTACTTAGTCCAGTTACTTACACGACTCTTATGAATGGTTACTGTGAATGGGGAAACATTCATGGGATGATTAAATTGCTCCAGGAGATGAAAGCAAAAGCTGTTGATCCGACCCATGTAACTTATACTGTAATTATCAAAGGACTCTGCAAACAGAGGAAACTGCAAAAGGCTGTCCACTTAGTTGAGGCAATGTATGCTAAGGACCTAATCCCAGATCAGATCACATATAATACCATCATTCAATGTTTCTGCAGAGCTCGTGACTTGAAGAAAGCTTTTCAGTTGCACGATGAGATGTTAAAGCATAATCTCGAGCCTACTCCTGTGACATATAATGTCCTCATCAATGGTCTTTGTGTATATGGTGACCTAAATGATGCTGACAGGCTATTGGATTTTCTGGATGACCGTAACATCAATTTGACAAAAGTTGCTTATACCACATTAATCAAAGCACATTGTGCAAAGGGTTATGCACTCAGGGCAGTGGAGCTCTTTGATCGGATGGTGGAGAAAGGATTTGAAATCTCCATCAGAGATTATAGTTCTGTAATAAATAGGTTATGCAAAAGGTCTCTAATAACTGAAGCGAAATATTTTTTCTGTATGATGCTATCTGATCGGATATATCCTGATCAAGAGCTTTGTAAGGTGATGCTCAATGCTTTCCGTCAAGATGGTGATTCAAGCTCACTAAATGAACTCCTTGCTGAGATGATCAAATGTGGCTTTCTTCCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

828

Amino Acids

93.58

Weight (kDa)

7.73

Isoelectric Point (pI)

39.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	268 - 316	1.5e-11	PPR repeat family
PPR_3	PF13812	300 - 348	6.7e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	300 - 332	2.8e-09	PPR repeat
PPR	PF01535	306 - 336	1.3e-06	PPR repeat
PPR_2	PF13041	307 - 350	6.2e-13	PPR repeat family
PPR_2	PF13041	354 - 387	1.3e-06	PPR repeat family
PPR_1	PF12854	369 - 401	8e-12	PPR repeat
PPR_2	PF13041	373 - 422	3.3e-13	PPR repeat family
PPR	PF01535	376 - 406	1.3e-08	PPR repeat
PPR_1	PF12854	404 - 437	3.1e-06	PPR repeat
PPR_2	PF13041	409 - 457	6.1e-13	PPR repeat family
PPR	PF01535	412 - 440	8.4e-06	PPR repeat
PPR_1	PF12854	440 - 471	4.4e-08	PPR repeat
PPR_3	PF13812	510 - 555	8.5e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	512 - 560	4.8e-14	PPR repeat family
PPR_1	PF12854	542 - 571	1.1e-08	PPR repeat
PPR_3	PF13812	576 - 626	4.3e-07	Pentatricopeptide repeat domain
PPR	PF01535	584 - 612	2.1e-06	PPR repeat
PPR_2	PF13041	584 - 630	2.2e-15	PPR repeat family
PPR_long	PF17177	603 - 719	3.4e-13	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	614 - 644	3.8e-07	PPR repeat
PPR_2	PF13041	619 - 657	2.7e-08	PPR repeat family
PPR_3	PF13812	640 - 696	2.4e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	648 - 679	1.5e-11	PPR repeat
PPR_2	PF13041	651 - 699	7.8e-19	PPR repeat family
TPR_24	PF23276	653 - 748	5.5e-08	Fungal tetratrico peptide repeats
PPR	PF01535	654 - 683	1.6e-07	PPR repeat
PPR_1	PF12854	683 - 712	1e-06	PPR repeat
PPR_2	PF13041	689 - 734	1.2e-09	PPR repeat family
PPR_2	PF13041	724 - 770	5.2e-09	PPR repeat family
PPR	PF01535	724 - 754	9.5e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13630 AT1G13630 AT1G13630 AT1G13630 AT1G13630 AT1G13630
fragaria_vesca	FvH4_4g29120
malus_domestica	MD13G1055600.v1.1 MD16G1054700.v1.1
prunus_persica	Prupe.2G062100_v2.0.a1 Prupe.2G062200_v2.0.a1 Prupe.2G062300_v2.0.a1 Prupe.7G020200_v2.0.a1 Prupe.7G020300_v2.0.a1
pyrus_communis	pycom16g04760
rosa_chinensis	RchiOBHm_Chr4g0437181
rosa_laevigata	RLG00000006457
rosa_multiflora	Rmu_co8390257.1_g000001 Rmu_sc0000591.1_g000006
rosa_roxburghii	Rroxscaffold_5G00378320
rosa_rugosa	Rorug04G0298500.1
rosa_samantha	Rh4AG353500 Rh4BG363300 Rh4CG377500 Rh4DG357300
rosa_wichuraiana	Rw4G030970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	924, 1337
Acc16I	TGCGCA	1 cut(s)	1472
Acc36I	ACCTGC	2 cut(s)	944, 1072
AccI	GTMKAC	1 cut(s)	1133
AciI	CCGC	8 cut(s)	99, 108, 120, 123, 388, 403, 761, 1192
AclWI	GGATC	3 cut(s)	110, 258, 1838
AcsI	RAATTY	2 cut(s)	48, 592
AcuI	CTGAAG	2 cut(s)	789, 2346
AdeI	CACNNNGTG	2 cut(s)	461, 2201
AfaI	GTAC	4 cut(s)	707, 1245, 1378, 1415
AfiI	CCNNNNNNNGG	3 cut(s)	125, 289, 290
AflII	CTTAAG	1 cut(s)	1184
AflIII	ACRYGT	1 cut(s)	1340
AhlI	ACTAGT	1 cut(s)	710
AjnI	CCWGG	2 cut(s)	243, 1818
AjuI	GAANNNNNNNTTGG	2 cut(s)	279, 311
Alw21I	GWGCWC	4 cut(s)	159, 1078, 1999, 2235
Alw26I	GTCTC	2 cut(s)	1676, 2319
AlwI	GGATC	3 cut(s)	110, 258, 1838
Ama87I	CYCGRG	2 cut(s)	496, 2051
AoxI	GGCC	4 cut(s)	127, 166, 800, 1698
ApeKI	GCWGC	6 cut(s)	135, 466, 1189, 1589, 1592, 1726
ApoI	RAATTY	2 cut(s)	48, 592
AseI	ATTAAT	1 cut(s)	2186
AspLEI	GCGC	1 cut(s)	1473
AspS9I	GGNCC	4 cut(s)	128, 280, 800, 1942
AsuHPI	GGTGA	6 cut(s)	154, 212, 436, 2117, 2404, 2432
AvaI	CYCGRG	2 cut(s)	496, 2051
AvaII	GGWCC	2 cut(s)	280, 1942
BaeGI	GKGCMC	1 cut(s)	1155
BanII	GRGCYC	5 cut(s)	159, 497, 1078, 1999, 2235
BauI	CACGAG	1 cut(s)	1998
Bbv12I	GWGCWC	4 cut(s)	159, 1078, 1999, 2235
BbvI	GCAGC	6 cut(s)	147, 453, 1176, 1601, 1604, 1713
BceAI	ACGGC	1 cut(s)	95
BciT130I	CCWGG	2 cut(s)	245, 1820
BclI	TGATCA	3 cut(s)	1120, 2374, 2457
BcoDI	GTCTC	2 cut(s)	1676, 2319
BcuI	ACTAGT	1 cut(s)	710
BfaI	CTAG	1 cut(s)	711
BfmI	CTRYAG	2 cut(s)	211, 1990
BfrI	CTTAAG	1 cut(s)	1184
BfuAI	ACCTGC	2 cut(s)	944, 1072
BglI	GCCNNNNNGGC	1 cut(s)	1164
BglII	AGATCT	2 cut(s)	586, 1330
BisI	GCNGC	8 cut(s)	99, 123, 136, 467, 1190, 1590, 1593, 1727
BlpI	GCTNAGC	2 cut(s)	1077, 1250
BlsI	GCNGC	8 cut(s)	100, 124, 137, 468, 1191, 1591, 1594, 1728
Bme1390I	CCNGG	2 cut(s)	245, 1820
Bme18I	GGWCC	2 cut(s)	280, 1942
BmeT110I	CYCGRG	2 cut(s)	496, 2051
BmgT120I	GGNCC	4 cut(s)	128, 280, 800, 1942
BmiI	GGNNCC	2 cut(s)	282, 1326
BmrFI	CCNGG	2 cut(s)	245, 1820
BmrI	ACTGGG	1 cut(s)	499
BmsI	GCATC	7 cut(s)	547, 661, 748, 1191, 2107, 2340, 2385
BmuI	ACTGGG	1 cut(s)	499
BpmI	CTGGAG	1 cut(s)	1802
Bpu10I	CCTNAGC	1 cut(s)	1938
Bpu1102I	GCTNAGC	2 cut(s)	1077, 1250
BpuEI	CTTGAG	1 cut(s)	296
BsaAI	YACGTR	1 cut(s)	1131
BsaI	GGTCTC	2 cut(s)	1676, 2319
BsaJI	CCNNGG	2 cut(s)	177, 243
BsaXI	ACNNNNNCTCC	2 cut(s)	389, 419
Bsc4I	CCNNNNNNNGG	3 cut(s)	125, 289, 290
Bse118I	RCCGGY	2 cut(s)	125, 164
Bse1I	ACTGG	2 cut(s)	494, 1748
Bse3DI	GCAATG	1 cut(s)	1935
BseBI	CCWGG	2 cut(s)	245, 1820
BseDI	CCNNGG	2 cut(s)	177, 243
BseGI	GGATG	9 cut(s)	12, 33, 89, 520, 1567, 1713, 1809, 2149, 2250
BseLI	CCNNNNNNNGG	3 cut(s)	125, 289, 290
BseMI	GCAATG	1 cut(s)	1935
BseMII	CTCAG	8 cut(s)	161, 687, 797, 1091, 1264, 1482, 2233, 2442
BseNI	ACTGG	2 cut(s)	494, 1748
BseRI	GAGGAG	2 cut(s)	397, 410
BseSI	GKGCMC	1 cut(s)	1155
BseXI	GCAGC	6 cut(s)	147, 453, 1176, 1601, 1604, 1713
BsgI	GTGCAG	1 cut(s)	1428
BshFI	GGCC	4 cut(s)	129, 168, 802, 1700
BsiHKAI	GWGCWC	4 cut(s)	159, 1078, 1999, 2235
BsiHKCI	CYCGRG	2 cut(s)	496, 2051
BsiSI	CCGG	2 cut(s)	126, 165
BslFI	GGGAC	1 cut(s)	500
BslI	CCNNNNNNNGG	3 cut(s)	125, 289, 290
BsmAI	GTCTC	2 cut(s)	1676, 2319
BsmFI	GGGAC	1 cut(s)	500
BsmI	GAATGC	2 cut(s)	337, 1740
BsnI	GGCC	4 cut(s)	129, 168, 802, 1700
Bso31I	GGTCTC	2 cut(s)	1676, 2319
BsoBI	CYCGRG	2 cut(s)	496, 2051
Bsp1286I	GDGCHC	6 cut(s)	159, 497, 1078, 1155, 1999, 2235
Bsp1720I	GCTNAGC	2 cut(s)	1077, 1250
BspACI	CCGC	8 cut(s)	99, 108, 120, 123, 388, 403, 761, 1192
BspANI	GGCC	4 cut(s)	129, 168, 802, 1700
BspCNI	CTCAG	8 cut(s)	162, 688, 796, 1090, 1263, 1483, 2232, 2443
BspLI	GGNNCC	2 cut(s)	282, 1326
BspMAI	CTGCAG	1 cut(s)	1994
BspMI	ACCTGC	2 cut(s)	944, 1072
BspPI	GGATC	3 cut(s)	110, 258, 1838
BspTI	CTTAAG	1 cut(s)	1184
BspTNI	GGTCTC	2 cut(s)	1676, 2319
BsrDI	GCAATG	1 cut(s)	1935
BsrFI	RCCGGY	2 cut(s)	125, 164
BsrI	ACTGG	2 cut(s)	494, 1748
BssAI	RCCGGY	2 cut(s)	125, 164
BssECI	CCNNGG	2 cut(s)	177, 243
BssNAI	GTATAC	1 cut(s)	1134
BssSI	CACGAG	1 cut(s)	1998
BssT1I	CCWWGG	1 cut(s)	177
Bst1107I	GTATAC	1 cut(s)	1134
Bst2BI	CACGAG	1 cut(s)	1998
Bst2UI	CCWGG	2 cut(s)	245, 1820
Bst6I	CTCTTC	3 cut(s)	70, 1191, 1415
BstAFI	CTTAAG	1 cut(s)	1184
BstAPI	GCANNNNNTGC	3 cut(s)	1735, 1934, 2201
BstBAI	YACGTR	1 cut(s)	1131
BstC8I	GCNNGC	4 cut(s)	108, 127, 748, 1370
BstEII	GGTNACC	2 cut(s)	200, 2105
BstF5I	GGATG	9 cut(s)	12, 33, 89, 520, 1567, 1713, 1809, 2149, 2250
BstHHI	GCGC	1 cut(s)	1473
BstMAI	GTCTC	2 cut(s)	1676, 2319
BstNI	CCWGG	2 cut(s)	245, 1820
BstNSI	RCATGY	1 cut(s)	1344
BstPI	GGTNACC	2 cut(s)	200, 2105
BstSCI	CCNGG	2 cut(s)	243, 1818
BstSFI	CTRYAG	2 cut(s)	211, 1990
BstSLI	GKGCMC	1 cut(s)	1155
BstSNI	TACGTA	1 cut(s)	1131
BstV1I	GCAGC	6 cut(s)	147, 453, 1176, 1601, 1604, 1713
BstX2I	RGATCY	3 cut(s)	250, 586, 1330
BstYI	RGATCY	3 cut(s)	250, 586, 1330
BstZ17I	GTATAC	1 cut(s)	1134
BsuRI	GGCC	4 cut(s)	129, 168, 802, 1700
BtsCI	GGATG	9 cut(s)	12, 33, 89, 520, 1567, 1713, 1809, 2149, 2250
BtsI	GCAGTG	3 cut(s)	138, 1153, 2232
BtsIMutI	CAGTG	3 cut(s)	138, 1153, 2232
BveI	ACCTGC	2 cut(s)	944, 1072
Cac8I	GCNNGC	4 cut(s)	108, 127, 748, 1370
CfoI	GCGC	1 cut(s)	1473
Cfr10I	RCCGGY	2 cut(s)	125, 164
Cfr13I	GGNCC	4 cut(s)	128, 280, 800, 1942
Csp6I	GTAC	4 cut(s)	706, 1244, 1377, 1414
CviQI	GTAC	4 cut(s)	706, 1244, 1377, 1414
DraIII	CACNNNGTG	2 cut(s)	461, 2201
Eam1104I	CTCTTC	3 cut(s)	70, 1191, 1415
EarI	CTCTTC	3 cut(s)	70, 1191, 1415
Ecl136II	GAGCTC	4 cut(s)	157, 1076, 1997, 2233
Eco105I	TACGTA	1 cut(s)	1131
Eco130I	CCWWGG	1 cut(s)	177
Eco24I	GRGCYC	5 cut(s)	159, 497, 1078, 1999, 2235
Eco31I	GGTCTC	2 cut(s)	1676, 2319
Eco32I	GATATC	1 cut(s)	652
Eco47I	GGWCC	2 cut(s)	280, 1942
Eco53kI	GAGCTC	4 cut(s)	157, 1076, 1997, 2233
Eco57I	CTGAAG	2 cut(s)	789, 2346
Eco88I	CYCGRG	2 cut(s)	496, 2051
Eco91I	GGTNACC	2 cut(s)	200, 2105
EcoICRI	GAGCTC	4 cut(s)	157, 1076, 1997, 2233
EcoO109I	RGGNCCY	2 cut(s)	280, 1942
EcoO65I	GGTNACC	2 cut(s)	200, 2105
EcoRII	CCWGG	2 cut(s)	243, 1818
EcoRV	GATATC	1 cut(s)	652
EcoT14I	CCWWGG	1 cut(s)	177
EcoT38I	GRGCYC	5 cut(s)	159, 497, 1078, 1999, 2235
ErhI	CCWWGG	1 cut(s)	177
FalI	AAGNNNNNCTT	2 cut(s)	1188, 1220
FaqI	GGGAC	1 cut(s)	500
FauI	CCCGC	3 cut(s)	115, 127, 1185
FbaI	TGATCA	3 cut(s)	1120, 2374, 2457
FblI	GTMKAC	1 cut(s)	1133
Fnu4HI	GCNGC	8 cut(s)	99, 123, 136, 467, 1190, 1590, 1593, 1727
FokI	GGATG	8 cut(s)	20, 76, 527, 1574, 1720, 1816, 2156, 2257
FriOI	GRGCYC	5 cut(s)	159, 497, 1078, 1999, 2235
Fsp4HI	GCNGC	8 cut(s)	99, 123, 136, 467, 1190, 1590, 1593, 1727
FspBI	CTAG	1 cut(s)	711
FspI	TGCGCA	1 cut(s)	1472
GlaI	GCGC	1 cut(s)	1472
GluI	GCNGC	8 cut(s)	99, 123, 136, 467, 1190, 1590, 1593, 1727
GsuI	CTGGAG	1 cut(s)	1802
HaeIII	GGCC	4 cut(s)	129, 168, 802, 1700
HapII	CCGG	2 cut(s)	126, 165
HhaI	GCGC	1 cut(s)	1473
Hin6I	GCGC	1 cut(s)	1471
HinP1I	GCGC	1 cut(s)	1471
HincII	GTYRAC	1 cut(s)	1713
HindII	GTYRAC	1 cut(s)	1713
HindIII	AAGCTT	3 cut(s)	969, 1574, 2013
HinfI	GANTC	8 cut(s)	235, 287, 911, 1114, 1354, 1762, 1881, 2423
HpaII	CCGG	2 cut(s)	126, 165
HphI	GGTGA	6 cut(s)	154, 212, 436, 2117, 2404, 2432
Hpy166II	GTNNAC	7 cut(s)	708, 740, 981, 1134, 1271, 1713, 1915
Hpy8I	GTNNAC	7 cut(s)	708, 740, 981, 1134, 1271, 1713, 1915
Hpy99I	CGWCG	1 cut(s)	616
HpyAV	CCTTC	6 cut(s)	70, 103, 421, 428, 784, 813
HpyCH4IV	ACGT	2 cut(s)	614, 1130
HpySE526I	ACGT	2 cut(s)	614, 1130
HspAI	GCGC	1 cut(s)	1471
KroI	GCCGGC	1 cut(s)	125
KroNI	GCCGGC	1 cut(s)	127
Ksp22I	TGATCA	3 cut(s)	1120, 2374, 2457
LmnI	GCTCC	3 cut(s)	1073, 1821, 2230
Lsp1109I	GCAGC	6 cut(s)	147, 453, 1176, 1601, 1604, 1713
LweI	GCATC	7 cut(s)	547, 661, 748, 1191, 2107, 2340, 2385
MaeI	CTAG	1 cut(s)	711
MaeII	ACGT	2 cut(s)	614, 1130
MflI	RGATCY	3 cut(s)	250, 586, 1330
MhlI	GDGCHC	6 cut(s)	159, 497, 1078, 1155, 1999, 2235
MlyI	GAGTC	2 cut(s)	1756, 1875
MmeI	TCCRAC	1 cut(s)	1871
MroNI	GCCGGC	1 cut(s)	125
MseI	TTAA	9 cut(s)	638, 678, 1064, 1104, 1185, 1809, 2039, 2186, 2482
MslI	CAYNNNNRTG	1 cut(s)	1605
MspCI	CTTAAG	1 cut(s)	1184
MspI	CCGG	2 cut(s)	126, 165
MspR9I	CCNGG	2 cut(s)	245, 1820
Mva1269I	GAATGC	2 cut(s)	337, 1740
MvaI	CCWGG	2 cut(s)	245, 1820
NaeI	GCCGGC	1 cut(s)	127
NgoMIV	GCCGGC	1 cut(s)	125
NlaIV	GGNNCC	2 cut(s)	282, 1326
NmeAIII	GCCGAG	1 cut(s)	178
NmuCI	GTSAC	6 cut(s)	200, 1021, 1645, 2000, 2065, 2105
NsbI	TGCGCA	1 cut(s)	1472
NspI	RCATGY	1 cut(s)	1344
PaeR7I	CTCGAG	2 cut(s)	496, 2051
PciI	ACATGT	1 cut(s)	1340
PcsI	WCGNNNNNNNCGW	1 cut(s)	347
PctI	GAATGC	2 cut(s)	337, 1740
PdiI	GCCGGC	1 cut(s)	127
PfeI	GAWTC	6 cut(s)	235, 287, 911, 1114, 1354, 2423
PfoI	TCCNGGA	1 cut(s)	1818
PkrI	GCNGC	8 cut(s)	100, 124, 137, 468, 1191, 1591, 1594, 1728
PleI	GAGTC	2 cut(s)	1756, 1875
PpsI	GAGTC	2 cut(s)	1756, 1875
Ppu21I	YACGTR	1 cut(s)	1131
PpuMI	RGGWCCY	2 cut(s)	280, 1942
PscI	ACATGT	1 cut(s)	1340
PshBI	ATTAAT	1 cut(s)	2186
PsiI	TTATAA	2 cut(s)	924, 1337
Psp124BI	GAGCTC	4 cut(s)	159, 1078, 1999, 2235
Psp5II	RGGWCCY	2 cut(s)	280, 1942
Psp6I	CCWGG	2 cut(s)	243, 1818
PspEI	GGTNACC	2 cut(s)	200, 2105
PspGI	CCWGG	2 cut(s)	243, 1818
PspN4I	GGNNCC	2 cut(s)	282, 1326
PspPI	GGNCC	4 cut(s)	128, 280, 800, 1942
PspPPI	RGGWCCY	2 cut(s)	280, 1942
PspXI	VCTCGAGB	1 cut(s)	496
PstI	CTGCAG	1 cut(s)	1994
PsuI	RGATCY	3 cut(s)	250, 586, 1330
RsaI	GTAC	4 cut(s)	707, 1245, 1378, 1415
RsaNI	GTAC	4 cut(s)	706, 1244, 1377, 1414
RseI	CAYNNNNRTG	1 cut(s)	1605
SacI	GAGCTC	4 cut(s)	159, 1078, 1999, 2235
SaqAI	TTAA	9 cut(s)	638, 678, 1064, 1104, 1185, 1809, 2039, 2186, 2482
SatI	GCNGC	8 cut(s)	99, 123, 136, 467, 1190, 1590, 1593, 1727
Sau96I	GGNCC	4 cut(s)	128, 280, 800, 1942
SchI	GAGTC	2 cut(s)	1756, 1875
ScrFI	CCNGG	2 cut(s)	245, 1820
SduI	GDGCHC	6 cut(s)	159, 497, 1078, 1155, 1999, 2235
SfaNI	GCATC	7 cut(s)	547, 661, 748, 1191, 2107, 2340, 2385
SfcI	CTRYAG	2 cut(s)	211, 1990
Sfr274I	CTCGAG	2 cut(s)	496, 2051
SinI	GGWCC	2 cut(s)	280, 1942
SlaI	CTCGAG	2 cut(s)	496, 2051
SmiMI	CAYNNNNRTG	1 cut(s)	1605
SmlI	CTYRAG	4 cut(s)	275, 496, 1184, 2051
SmoI	CTYRAG	4 cut(s)	275, 496, 1184, 2051
SnaBI	TACGTA	1 cut(s)	1131
SpeI	ACTAGT	1 cut(s)	710
SsiI	CCGC	8 cut(s)	99, 108, 120, 123, 388, 403, 761, 1192
SspI	AATATT	6 cut(s)	928, 1033, 1171, 1552, 1585, 2336
SspMI	CTAG	1 cut(s)	711
SstI	GAGCTC	4 cut(s)	159, 1078, 1999, 2235
StyD4I	CCNGG	2 cut(s)	243, 1818
StyI	CCWWGG	1 cut(s)	177
TaiI	ACGT	2 cut(s)	617, 1133
TaqII	GACCGA	1 cut(s)	805
TatI	WGTACW	2 cut(s)	705, 1413
TauI	GCSGC	2 cut(s)	101, 125
TfiI	GAWTC	6 cut(s)	235, 287, 911, 1114, 1354, 2423
Tru1I	TTAA	9 cut(s)	638, 678, 1064, 1104, 1185, 1809, 2039, 2186, 2482
Tru9I	TTAA	9 cut(s)	638, 678, 1064, 1104, 1185, 1809, 2039, 2186, 2482
TscAI	CASTG	3 cut(s)	145, 1160, 2232
TseFI	GTSAC	6 cut(s)	200, 1021, 1645, 2000, 2065, 2105
TseI	GCWGC	6 cut(s)	135, 466, 1189, 1589, 1592, 1726
Tsp45I	GTSAC	6 cut(s)	200, 1021, 1645, 2000, 2065, 2105
TspGWI	ACGGA	3 cut(s)	662, 1720, 2399
TspRI	CASTG	3 cut(s)	145, 1160, 2232
Vha464I	CTTAAG	1 cut(s)	1184
VpaK11BI	GGWCC	2 cut(s)	280, 1942
VspI	ATTAAT	1 cut(s)	2186
XapI	RAATTY	2 cut(s)	48, 592
XceI	RCATGY	1 cut(s)	1344
XhoI	CTCGAG	2 cut(s)	496, 2051
XmiI	GTMKAC	1 cut(s)	1133
XspI	CTAG	1 cut(s)	711

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.