Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0006693

Physical Location & Seq

Genomic Coordinates Reverse (-)

3880201 .. 3884586

Gene Structure 4386 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1055600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2019 bp

ATGGTGGATGAAGAAGGCCCTGGTTTTGCACCTTCACTTTGTGAGCTGCTCTTGCGTAGATTCAGGGACTGGGACTCAATTAGTGTGGTGTGGGATACGTTGGCGTTTGCTTATTCGAGATCTGAGATGGTTCATGATGCCCTGTCTGTTCTTGCTAAGATGAGAGATTTGAATTTGAAGGTTTCGACATCTACCTATAACTGCCTGTTGCATAATTTGAGGCATACAGATAACATGTGGAATGTTTATAATGAAATAGAAGATACTGGAACTCTGGAGAGTGACTACACTACTTCCATACTTATAGATGGACTGTGCCAGCAATCCGGTCTGCAAGATGCAGTTTCTTTCCTCATGGATGCTGAAAGAACGGAGACTGGGCCTTCTGTTGTTTCTTTCAATACCATCATGTCTTGGTCCTGTAAATTGGGTTTTGTGGATGTTGCGAAGTCGTTTTTTTTGTATGATGTTCAAGTATGGACTTGTTCATTGGAAGAAGCATTGGAGTTCACCAAAGACATGGAGAGGCATGGGGTACAGCCTGACACGGTAACTTACAACATTCTCTGTAAGGGGTTTCATCTACTTGGTTTGATGAGTGGAGCTCGCAAGGTCATTCAGCAAATGTTGGTTAAGGGGTTGAATCCGGATCATGTTACATATACAATTATGATATGTGGCCACTGCCATGTTGGCAACATTGACGAAGCCCTTAAGTTGCGGAAAGAGATGATTTCAAGAGATTTTCAGTTGAGTGTCATTGTTTACAGTGTACCACTCAGCTGTATGTGTAAAAGTGGACGGGTAGAAGAAGCATTGGGATTGTTGTATGAGATGGAAGCTGTTGGCTTGGAACCAGATCTGACAACATATTCAATCCTCATTCATGGTCTATGCAAGCAAGGAGATGTACAAAGGGCTTGGGAAATATATAGAGAAATGTACAGGAAGAGAATCATTCCTAATTACTCTGCACACCGCGCTATTCTGTTAGGTCTGTGTCAGAAAGGGGATATTTATGAGGCAAGGAAGTATTTTGATCATCTGACGACAAGGGCTGTGACAGAGGATATTGTGCTGTATAATATTATGATGGATGGGTATGTAAAACTAGGTAATGTTGCAGAAGCCATACAATTATATAAACAAATAATTGAGAAGGGAATAAATCCTAGTACTGTCACTTTCAATACTCTTATTCATGGTTTCTGCAAAACTGGGAAACTAGTCGAGGCTCGAAGGATGTTGGATAGCATCGAGCTGCATGGATTGCTACCAAGTCCAGTTAGTTATACTACTCTTATGAATGCTAACTGTGAACAGGGAAACATCAAGGTTATGCTTGAATTACTTCGAGAGATGGAAGCAAAAGCTGTAGAACCAACTCATGTATCTTACACGGTAGGTATTAAAGGACTTTGCAAACAGGGGAAGCTGTGGGATGCTGTTCACTTAGTCGAGAAAATGTATGCTCAGGGCCTAACCCCGGATCAAATCACATATAATACTATCGTCAAATGTTTCTGCAAAGCTCAAGACTTCGAGAAAGCTTTTCAGTTGCACAACGAGATGCTGATGCATAATCTTGAGCCAACTCCTGTTACATATAATTTCCTTATCAATGGTCTTTGTGTATATGGTGGCCTAGAGGATGCTGACAGGCTACTGGTTTCTCTCGATGACGGCAATATCAATTTGACAAAGTTTGCTTATAGCACGTTAATAAAAGCACATTGTGCAAAGGGTGATGTATATAGGGCTGTGGGACTCTTTCTTCTAATGATGGAGAAAGGATTTGAGATCTCCATCAGAGATTATAGTGCTGTAATTAATAGATTGTGCAAAAGGTGTAGGATAACTGAAGCAAAGTACTTTTTCTGTATGATGTTATCTGATGGGATTTTTCCTGATCAAGAACTCTGTGAGGTGATGCTTAATGTTTTCGATCAAGGTGGTGATTTTGATTCAGCAGCGGAACTCCTTGCTGAGATGATCAAATTTGGCTTTCATCCTGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

673

Amino Acids

76.17

Weight (kDa)

5.37

Isoelectric Point (pI)

32.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	164 - 193	3.4e-07	PPR repeat family
PPR_2	PF13041	197 - 230	6.4e-07	PPR repeat family
PPR_1	PF12854	212 - 244	1.2e-11	PPR repeat
PPR	PF01535	219 - 248	5.8e-08	PPR repeat
PPR_2	PF13041	222 - 265	2.7e-07	PPR repeat family
PPR_2	PF13041	252 - 300	7.3e-13	PPR repeat family
PPR_3	PF13812	275 - 330	8.2e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	283 - 314	2.1e-11	PPR repeat
PPR	PF01535	290 - 318	9.8e-07	PPR repeat
TPR_24	PF23276	291 - 384	9.5e-08	Fungal tetratrico peptide repeats
PPR_2	PF13041	293 - 335	3e-08	PPR repeat family
PPR_2	PF13041	357 - 405	2.8e-16	PPR repeat family
PPR	PF01535	359 - 389	3e-07	PPR repeat
PPR_long	PF17177	370 - 496	5.9e-08	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	387 - 418	2.8e-11	PPR repeat
PPR_2	PF13041	391 - 439	4.8e-12	PPR repeat family
PPR	PF01535	394 - 423	5.6e-06	PPR repeat
PPR_2	PF13041	426 - 475	8e-12	PPR repeat family
PPR_long	PF17177	443 - 541	3.2e-10	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	459 - 489	2.4e-06	PPR repeat
PPR_2	PF13041	464 - 510	5.4e-11	PPR repeat family
PPR_3	PF13812	485 - 541	2.5e-08	Pentatricopeptide repeat domain
TPR_24	PF23276	488 - 591	6.6e-08	Fungal tetratrico peptide repeats
PPR_1	PF12854	493 - 524	9.6e-11	PPR repeat
PPR_2	PF13041	496 - 544	1.3e-16	PPR repeat family
PPR	PF01535	499 - 528	3.9e-06	PPR repeat
PPR_2	PF13041	569 - 615	1.9e-06	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0006693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13630 AT1G13630 AT1G13630 AT1G13630 AT1G13630 AT1G13630
fragaria_vesca	FvH4_4g29120
malus_domestica	MD13G1055600.v1.1 MD16G1054700.v1.1
prunus_persica	Prupe.2G062100_v2.0.a1 Prupe.2G062200_v2.0.a1 Prupe.2G062300_v2.0.a1 Prupe.7G020200_v2.0.a1 Prupe.7G020300_v2.0.a1
pyrus_communis	pycom16g04760
rosa_chinensis	RchiOBHm_Chr4g0437181
rosa_laevigata	RLG00000006457
rosa_multiflora	Rmu_co8390257.1_g000001 Rmu_sc0000591.1_g000006
rosa_roxburghii	Rroxscaffold_5G00378320
rosa_rugosa	Rorug04G0298500.1
rosa_samantha	Rh4AG353500 Rh4BG363300 Rh4CG377500 Rh4DG357300
rosa_wichuraiana	Rw4G030970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	249
AccII	CGCG	1 cut(s)	981
AccIII	TCCGGA	1 cut(s)	646
AciI	CCGC	3 cut(s)	721, 979, 1973
AclWI	GGATC	2 cut(s)	657, 1497
AcoI	YGGCCR	1 cut(s)	679
AcsI	RAATTY	2 cut(s)	172, 1997
AcuI	CTGAAG	1 cut(s)	1881
AdeI	CACNNNGTG	2 cut(s)	41, 1736
AfaI	GTAC	6 cut(s)	537, 774, 912, 944, 1177, 1871
AfiI	CCNNNNNNNGG	1 cut(s)	1486
AflII	CTTAAG	1 cut(s)	713
AflIII	ACRYGT	1 cut(s)	234
AgsI	TTSAA	9 cut(s)	172, 178, 400, 473, 643, 738, 876, 1189, 1346
AhlI	ACTAGT	1 cut(s)	1225
AjnI	CCWGG	1 cut(s)	19
AluBI	AGCT	9 cut(s)	46, 605, 783, 842, 1261, 1373, 1435, 1532, 1550
AluI	AGCT	9 cut(s)	46, 605, 783, 842, 1261, 1373, 1435, 1532, 1550
Alw21I	GWGCWC	1 cut(s)	607
Alw26I	GTCTC	1 cut(s)	368
AlwI	GGATC	2 cut(s)	657, 1497
AlwNI	CAGNNNCTG	1 cut(s)	69
Aor13HI	TCCGGA	1 cut(s)	646
AoxI	GGCC	5 cut(s)	16, 380, 679, 1477, 1642
ApeKI	GCWGC	3 cut(s)	46, 1261, 1970
ApoI	RAATTY	2 cut(s)	172, 1997
AseI	ATTAAT	1 cut(s)	1830
Asp700I	GAANNNNTTC	1 cut(s)	1350
AspLEI	GCGC	1 cut(s)	983
AspS9I	GGNCC	4 cut(s)	17, 380, 417, 1477
AsuC2I	CCSGG	1 cut(s)	1487
AsuHPI	GGTGA	4 cut(s)	502, 1757, 1939, 1967
AvaII	GGWCC	1 cut(s)	417
BaeI	ACNNNNGTAYC	2 cut(s)	1374, 1407
BalI	TGGCCA	1 cut(s)	681
BanII	GRGCYC	1 cut(s)	607
Bbv12I	GWGCWC	1 cut(s)	607
BbvI	GCAGC	3 cut(s)	33, 1248, 1982
BceAI	ACGGC	1 cut(s)	1699
BciT130I	CCWGG	1 cut(s)	21
BciVI	GTATCC	1 cut(s)	88
BclI	TGATCA	3 cut(s)	1039, 1909, 1992
BcnI	CCSGG	1 cut(s)	1487
BcoDI	GTCTC	1 cut(s)	368
BcuI	ACTAGT	1 cut(s)	1225
BfaI	CTAG	4 cut(s)	1112, 1173, 1226, 1646
BfmI	CTRYAG	1 cut(s)	1374
BfrI	CTTAAG	1 cut(s)	713
BfuI	GTATCC	1 cut(s)	88
BglI	GCCNNNNNGGC	1 cut(s)	693
BglII	AGATCT	3 cut(s)	119, 859, 1800
BisI	GCNGC	3 cut(s)	47, 1262, 1971
BlsI	GCNGC	3 cut(s)	48, 1263, 1972
BmcAI	AGTACT	2 cut(s)	1177, 1871
Bme1390I	CCNGG	2 cut(s)	21, 1487
Bme18I	GGWCC	1 cut(s)	417
BmgT120I	GGNCC	4 cut(s)	17, 380, 417, 1477
BmiI	GGNNCC	1 cut(s)	855
BmrFI	CCNGG	2 cut(s)	21, 1487
BmrI	ACTGGG	3 cut(s)	79, 387, 1227
BmsI	GCATC	9 cut(s)	127, 328, 349, 1263, 1432, 1560, 1566, 1642, 1920
BmuI	ACTGGG	3 cut(s)	79, 387, 1227
BplI	GAGNNNNNCTC	2 cut(s)	589, 621
BpmI	CTGGAG	1 cut(s)	296
Bpu10I	CCTNAGC	1 cut(s)	1473
BpuEI	CTTGAG	2 cut(s)	1518, 1607
BpuMI	CCSGG	1 cut(s)	1487
BsaBI	GATNNNNATC	1 cut(s)	1805
BsaJI	CCNNGG	2 cut(s)	19, 1485
BsaWI	WCCGGW	2 cut(s)	326, 646
Bsc4I	CCNNNNNNNGG	1 cut(s)	1486
Bse1I	ACTGG	6 cut(s)	74, 271, 382, 1222, 1283, 1671
Bse8I	GATNNNNATC	1 cut(s)	1805
BseAI	TCCGGA	1 cut(s)	646
BseBI	CCWGG	1 cut(s)	21
BseDI	CCNNGG	2 cut(s)	19, 1485
BseGI	GGATG	8 cut(s)	13, 364, 445, 1102, 1248, 1447, 1657, 2008
BseJI	GATNNNNATC	1 cut(s)	1805
BseLI	CCNNNNNNNGG	1 cut(s)	1486
BseMII	CTCAG	4 cut(s)	114, 793, 1487, 1977
BseNI	ACTGG	6 cut(s)	74, 271, 382, 1222, 1283, 1671
BseXI	GCAGC	3 cut(s)	33, 1248, 1982
BsgI	GTGCAG	1 cut(s)	957
Bsh1236I	CGCG	1 cut(s)	981
BshFI	GGCC	5 cut(s)	18, 382, 681, 1479, 1644
BsiHKAI	GWGCWC	1 cut(s)	607
BsiSI	CCGG	3 cut(s)	327, 647, 1487
BslFI	GGGAC	3 cut(s)	80, 86, 1779
BslI	CCNNNNNNNGG	1 cut(s)	1486
BsmAI	GTCTC	1 cut(s)	368
BsmFI	GGGAC	3 cut(s)	80, 86, 1779
BsmI	GAATGC	1 cut(s)	1312
BsnI	GGCC	5 cut(s)	18, 382, 681, 1479, 1644
Bsp1286I	GDGCHC	1 cut(s)	607
Bsp13I	TCCGGA	1 cut(s)	646
Bsp1407I	TGTACA	2 cut(s)	910, 942
Bsp143I	GATC	9 cut(s)	119, 649, 859, 1039, 1489, 1800, 1909, 1945, 1992
BspACI	CCGC	3 cut(s)	721, 979, 1973
BspANI	GGCC	5 cut(s)	18, 382, 681, 1479, 1644
BspCNI	CTCAG	4 cut(s)	115, 792, 1486, 1978
BspEI	TCCGGA	1 cut(s)	646
BspFNI	CGCG	1 cut(s)	981
BspHI	TCATGA	1 cut(s)	133
BspLI	GGNNCC	1 cut(s)	855
BspPI	GGATC	2 cut(s)	657, 1497
BspTI	CTTAAG	1 cut(s)	713
BsrGI	TGTACA	2 cut(s)	910, 942
BsrI	ACTGG	6 cut(s)	74, 271, 382, 1222, 1283, 1671
BssECI	CCNNGG	2 cut(s)	19, 1485
BssMI	GATC	9 cut(s)	119, 649, 859, 1039, 1489, 1800, 1909, 1945, 1992
Bst2UI	CCWGG	1 cut(s)	21
Bst4CI	ACNGT	6 cut(s)	315, 550, 770, 1180, 1316, 1402
Bst6I	CTCTTC	1 cut(s)	944
BstAFI	CTTAAG	1 cut(s)	713
BstAPI	GCANNNNNTGC	2 cut(s)	1270, 1736
BstAUI	TGTACA	2 cut(s)	910, 942
BstC8I	GCNNGC	3 cut(s)	320, 607, 899
BstDEI	CTNAG	6 cut(s)	123, 156, 779, 1453, 1473, 1986
BstF5I	GGATG	8 cut(s)	13, 364, 445, 1102, 1248, 1447, 1657, 2008
BstFNI	CGCG	1 cut(s)	981
BstHHI	GCGC	1 cut(s)	983
BstKTI	GATC	9 cut(s)	122, 652, 862, 1042, 1492, 1803, 1912, 1948, 1995
BstMAI	GTCTC	1 cut(s)	368
BstMBI	GATC	9 cut(s)	119, 649, 859, 1039, 1489, 1800, 1909, 1945, 1992
BstMWI	GCNNNNNNNGC	5 cut(s)	52, 693, 980, 1270, 1736
BstNI	CCWGG	1 cut(s)	21
BstNSI	RCATGY	1 cut(s)	238
BstSCI	CCNGG	2 cut(s)	19, 1485
BstSFI	CTRYAG	1 cut(s)	1374
BstUI	CGCG	1 cut(s)	981
BstV1I	GCAGC	3 cut(s)	33, 1248, 1982
BstX2I	RGATCY	3 cut(s)	119, 859, 1800
BstXI	CCANNNNNNTGG	1 cut(s)	520
BstYI	RGATCY	3 cut(s)	119, 859, 1800
BsuI	GTATCC	1 cut(s)	88
BsuRI	GGCC	5 cut(s)	18, 382, 681, 1479, 1644
BtsCI	GGATG	8 cut(s)	13, 364, 445, 1102, 1248, 1447, 1657, 2008
BtsI	GCAGTG	1 cut(s)	682
BtsIMutI	CAGTG	2 cut(s)	682, 775
Cac8I	GCNNGC	3 cut(s)	320, 607, 899
CaiI	CAGNNNCTG	1 cut(s)	69
CciI	TCATGA	1 cut(s)	133
CfoI	GCGC	1 cut(s)	983
Cfr13I	GGNCC	4 cut(s)	17, 380, 417, 1477
Csp6I	GTAC	6 cut(s)	536, 773, 911, 943, 1176, 1870
CspCI	CAANNNNNGTGG	2 cut(s)	66, 101
CviQI	GTAC	6 cut(s)	536, 773, 911, 943, 1176, 1870
DdeI	CTNAG	6 cut(s)	123, 156, 779, 1453, 1473, 1986
DpnI	GATC	9 cut(s)	121, 651, 861, 1041, 1491, 1802, 1911, 1947, 1994
DpnII	GATC	9 cut(s)	119, 649, 859, 1039, 1489, 1800, 1909, 1945, 1992
DraIII	CACNNNGTG	2 cut(s)	41, 1736
EaeI	YGGCCR	1 cut(s)	679
Eam1104I	CTCTTC	1 cut(s)	944
EarI	CTCTTC	1 cut(s)	944
Ecl136II	GAGCTC	1 cut(s)	605
Eco24I	GRGCYC	1 cut(s)	607
Eco47I	GGWCC	1 cut(s)	417
Eco53kI	GAGCTC	1 cut(s)	605
Eco57I	CTGAAG	1 cut(s)	1881
EcoICRI	GAGCTC	1 cut(s)	605
EcoO109I	RGGNCCY	2 cut(s)	17, 1477
EcoRII	CCWGG	1 cut(s)	19
EcoT22I	ATGCAT	1 cut(s)	1581
EcoT38I	GRGCYC	1 cut(s)	607
FaqI	GGGAC	3 cut(s)	80, 86, 1779
FbaI	TGATCA	3 cut(s)	1039, 1909, 1992
Fnu4HI	GCNGC	3 cut(s)	47, 1262, 1971
FokI	GGATG	8 cut(s)	20, 371, 452, 1109, 1255, 1454, 1664, 1995
FriOI	GRGCYC	1 cut(s)	607
Fsp4HI	GCNGC	3 cut(s)	47, 1262, 1971
FspBI	CTAG	4 cut(s)	1112, 1173, 1226, 1646
GlaI	GCGC	1 cut(s)	982
GluI	GCNGC	3 cut(s)	47, 1262, 1971
GsuI	CTGGAG	1 cut(s)	296
HaeIII	GGCC	5 cut(s)	18, 382, 681, 1479, 1644
HapII	CCGG	3 cut(s)	327, 647, 1487
HhaI	GCGC	1 cut(s)	983
Hin6I	GCGC	1 cut(s)	981
HinP1I	GCGC	1 cut(s)	981
HindIII	AAGCTT	1 cut(s)	1548
HinfI	GANTC	6 cut(s)	60, 74, 643, 954, 1767, 1964
HpaII	CCGG	3 cut(s)	327, 647, 1487
HphI	GGTGA	4 cut(s)	502, 1757, 1939, 1967
Hpy166II	GTNNAC	6 cut(s)	510, 766, 773, 800, 1319, 1450
Hpy188I	TCNGA	6 cut(s)	124, 864, 1005, 1047, 1811, 1894
Hpy8I	GTNNAC	6 cut(s)	510, 766, 773, 800, 1319, 1450
HpyAV	CCTTC	6 cut(s)	8, 42, 172, 393, 1153, 1233
HpyCH4III	ACNGT	6 cut(s)	315, 550, 770, 1180, 1316, 1402
HpyCH4IV	ACGT	2 cut(s)	98, 1718
HpyF10VI	GCNNNNNNNGC	5 cut(s)	52, 693, 980, 1270, 1736
HpyF3I	CTNAG	6 cut(s)	123, 156, 779, 1453, 1473, 1986
HpySE526I	ACGT	2 cut(s)	98, 1718
HspAI	GCGC	1 cut(s)	981
Kpn2I	TCCGGA	1 cut(s)	646
Ksp22I	TGATCA	3 cut(s)	1039, 1909, 1992
Kzo9I	GATC	9 cut(s)	119, 649, 859, 1039, 1489, 1800, 1909, 1945, 1992
LmnI	GCTCC	1 cut(s)	602
Lsp1109I	GCAGC	3 cut(s)	33, 1248, 1982
LweI	GCATC	9 cut(s)	127, 328, 349, 1263, 1432, 1560, 1566, 1642, 1920
MaeI	CTAG	4 cut(s)	1112, 1173, 1226, 1646
MaeII	ACGT	2 cut(s)	98, 1718
MaeIII	GTNAC	6 cut(s)	281, 550, 655, 1060, 1180, 1600
MalI	GATC	9 cut(s)	121, 651, 861, 1041, 1491, 1802, 1911, 1947, 1994
MboI	GATC	9 cut(s)	119, 649, 859, 1039, 1489, 1800, 1909, 1945, 1992
MboII	GAAGA	6 cut(s)	23, 272, 506, 821, 961, 1766
MflI	RGATCY	3 cut(s)	119, 859, 1800
MhlI	GDGCHC	1 cut(s)	607
MlsI	TGGCCA	1 cut(s)	681
MluNI	TGGCCA	1 cut(s)	681
MlyI	GAGTC	2 cut(s)	68, 1761
MmeI	TCCRAC	1 cut(s)	1227
MnlI	CCTC	9 cut(s)	213, 362, 519, 890, 1015, 1060, 1225, 1642, 1918
Mox20I	TGGCCA	1 cut(s)	681
Mph1103I	ATGCAT	1 cut(s)	1581
MroI	TCCGGA	1 cut(s)	646
MroXI	GAANNNNTTC	1 cut(s)	1350
MscI	TGGCCA	1 cut(s)	681
MseI	TTAA	7 cut(s)	633, 714, 1410, 1721, 1830, 1935, 2017
MslI	CAYNNNNRTG	1 cut(s)	687
Msp20I	TGGCCA	1 cut(s)	681
MspA1I	CMGCKG	2 cut(s)	783, 1973
MspCI	CTTAAG	1 cut(s)	713
MspI	CCGG	3 cut(s)	327, 647, 1487
MspR9I	CCNGG	2 cut(s)	21, 1487
Mva1269I	GAATGC	1 cut(s)	1312
MvaI	CCWGG	1 cut(s)	21
MvnI	CGCG	1 cut(s)	981
MwoI	GCNNNNNNNGC	5 cut(s)	52, 693, 980, 1270, 1736
NciI	CCSGG	1 cut(s)	1487
NdeII	GATC	9 cut(s)	119, 649, 859, 1039, 1489, 1800, 1909, 1945, 1992
NlaIV	GGNNCC	1 cut(s)	855
NmuCI	GTSAC	3 cut(s)	281, 1060, 1180
NsiI	ATGCAT	1 cut(s)	1581
NspI	RCATGY	1 cut(s)	238
PagI	TCATGA	1 cut(s)	133
PciI	ACATGT	1 cut(s)	234
PctI	GAATGC	1 cut(s)	1312
PdmI	GAANNNNTTC	1 cut(s)	1350
PfeI	GAWTC	4 cut(s)	60, 643, 954, 1964
PkrI	GCNGC	3 cut(s)	48, 1263, 1972
PleI	GAGTC	2 cut(s)	68, 1761
PpsI	GAGTC	2 cut(s)	68, 1761
PscI	ACATGT	1 cut(s)	234
PshBI	ATTAAT	1 cut(s)	1830
PsiI	TTATAA	1 cut(s)	249
Psp124BI	GAGCTC	1 cut(s)	607
Psp6I	CCWGG	1 cut(s)	19
PspGI	CCWGG	1 cut(s)	19
PspN4I	GGNNCC	1 cut(s)	855
PspPI	GGNCC	4 cut(s)	17, 380, 417, 1477
PstNI	CAGNNNCTG	1 cut(s)	69
PsuI	RGATCY	3 cut(s)	119, 859, 1800
PvuII	CAGCTG	1 cut(s)	783
RsaI	GTAC	6 cut(s)	537, 774, 912, 944, 1177, 1871
RsaNI	GTAC	6 cut(s)	536, 773, 911, 943, 1176, 1870
RseI	CAYNNNNRTG	1 cut(s)	687
SacI	GAGCTC	1 cut(s)	607
SaqAI	TTAA	7 cut(s)	633, 714, 1410, 1721, 1830, 1935, 2017
SatI	GCNGC	3 cut(s)	47, 1262, 1971
Sau3AI	GATC	9 cut(s)	119, 649, 859, 1039, 1489, 1800, 1909, 1945, 1992
Sau96I	GGNCC	4 cut(s)	17, 380, 417, 1477
ScaI	AGTACT	2 cut(s)	1177, 1871
SchI	GAGTC	2 cut(s)	68, 1761
ScrFI	CCNGG	2 cut(s)	21, 1487
SduI	GDGCHC	1 cut(s)	607
SfaNI	GCATC	9 cut(s)	127, 328, 349, 1263, 1432, 1560, 1566, 1642, 1920
SfcI	CTRYAG	1 cut(s)	1374
SinI	GGWCC	1 cut(s)	417
SmiMI	CAYNNNNRTG	1 cut(s)	687
SmlI	CTYRAG	3 cut(s)	713, 1533, 1586
SmoI	CTYRAG	3 cut(s)	713, 1533, 1586
SpeI	ACTAGT	1 cut(s)	1225
SsiI	CCGC	3 cut(s)	721, 979, 1973
SspI	AATATT	1 cut(s)	1087
SspMI	CTAG	4 cut(s)	1112, 1173, 1226, 1646
SstI	GAGCTC	1 cut(s)	607
StyD4I	CCNGG	2 cut(s)	19, 1485
TaaI	ACNGT	6 cut(s)	315, 550, 770, 1180, 1316, 1402
TaiI	ACGT	2 cut(s)	101, 1721
TatI	WGTACW	4 cut(s)	910, 942, 1175, 1869
TfiI	GAWTC	4 cut(s)	60, 643, 954, 1964
Tru1I	TTAA	7 cut(s)	633, 714, 1410, 1721, 1830, 1935, 2017
Tru9I	TTAA	7 cut(s)	633, 714, 1410, 1721, 1830, 1935, 2017
TscAI	CASTG	2 cut(s)	689, 775
TseFI	GTSAC	3 cut(s)	281, 1060, 1180
TseI	GCWGC	3 cut(s)	46, 1261, 1970
Tsp45I	GTSAC	3 cut(s)	281, 1060, 1180
TspDTI	ATGAA	9 cut(s)	24, 122, 267, 477, 569, 875, 1190, 1319, 1997
TspGWI	ACGGA	1 cut(s)	386
TspRI	CASTG	2 cut(s)	689, 775
Vha464I	CTTAAG	1 cut(s)	713
VpaK11BI	GGWCC	1 cut(s)	417
VspI	ATTAAT	1 cut(s)	1830
XapI	RAATTY	2 cut(s)	172, 1997
XceI	RCATGY	1 cut(s)	238
XcmI	CCANNNNNNNNNTGG	1 cut(s)	689
XmnI	GAANNNNTTC	1 cut(s)	1350
XspI	CTAG	4 cut(s)	1112, 1173, 1226, 1646
ZrmI	AGTACT	2 cut(s)	1177, 1871
Zsp2I	ATGCAT	1 cut(s)	1581

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.