Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G13630 AT1G13630 AT1G13630 AT1G13630 AT1G13630 AT1G13630 |
| fragaria_vesca | FvH4_4g29120 |
| malus_domestica | MD13G1055600.v1.1 MD16G1054700.v1.1 |
| prunus_persica | Prupe.2G062100_v2.0.a1 Prupe.2G062200_v2.0.a1 Prupe.2G062300_v2.0.a1 Prupe.7G020200_v2.0.a1 Prupe.7G020300_v2.0.a1 |
| pyrus_communis | pycom16g04760 |
| rosa_chinensis | RchiOBHm_Chr4g0437181 |
| rosa_laevigata | RLG00000006457 |
| rosa_multiflora | Rmu_co8390257.1_g000001 Rmu_sc0000591.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00378320 |
| rosa_rugosa | Rorug04G0298500.1 |
| rosa_samantha | Rh4AG353500 Rh4BG363300 Rh4CG377500 Rh4DG357300 |
| rosa_wichuraiana | Rw4G030970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 316 |
| AdeI | CACNNNGTG | 1 cut(s) | 272 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 316 |
| AgsI | TTSAA | 3 cut(s) | 79, 335, 532 |
| AluBI | AGCT | 3 cut(s) | 68, 86, 509 |
| AluI | AGCT | 3 cut(s) | 68, 86, 509 |
| Alw26I | GTCTC | 1 cut(s) | 66 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 509 |
| Ama87I | CYCGRG | 1 cut(s) | 69 |
| ApeKI | GCWGC | 1 cut(s) | 398 |
| AseI | ATTAAT | 2 cut(s) | 156, 366 |
| AsuHPI | GGTGA | 2 cut(s) | 293, 475 |
| AvaI | CYCGRG | 1 cut(s) | 69 |
| BanII | GRGCYC | 1 cut(s) | 306 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 498, 530 |
| BbvI | GCAGC | 1 cut(s) | 385 |
| BccI | CCATC | 2 cut(s) | 318, 425 |
| BclI | TGATCA | 2 cut(s) | 258, 445 |
| BcoDI | GTCTC | 1 cut(s) | 66 |
| BfaI | CTAG | 1 cut(s) | 518 |
| BisI | GCNGC | 1 cut(s) | 399 |
| BlsI | GCNGC | 1 cut(s) | 400 |
| BmeT110I | CYCGRG | 1 cut(s) | 69 |
| BmsI | GCATC | 2 cut(s) | 178, 456 |
| Bpu10I | CCTNAGC | 1 cut(s) | 9 |
| BpuEI | CTTGAG | 1 cut(s) | 143 |
| BsaAI | YACGTR | 1 cut(s) | 36 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 316 |
| Bse1I | ACTGG | 1 cut(s) | 207 |
| BseGI | GGATG | 1 cut(s) | 193 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 316 |
| BseNI | ACTGG | 1 cut(s) | 207 |
| BseXI | GCAGC | 1 cut(s) | 385 |
| BsiHKCI | CYCGRG | 1 cut(s) | 69 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 316 |
| BsmAI | GTCTC | 1 cut(s) | 66 |
| BsoBI | CYCGRG | 1 cut(s) | 69 |
| Bsp1286I | GDGCHC | 1 cut(s) | 306 |
| Bsp143I | GATC | 5 cut(s) | 25, 258, 445, 493, 511 |
| BspHI | TCATGA | 1 cut(s) | 547 |
| BspQI | GCTCTTC | 1 cut(s) | 311 |
| BsrI | ACTGG | 1 cut(s) | 207 |
| BssMI | GATC | 5 cut(s) | 25, 258, 445, 493, 511 |
| Bst4CI | ACNGT | 1 cut(s) | 456 |
| Bst6I | CTCTTC | 1 cut(s) | 311 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 272 |
| BstBAI | YACGTR | 1 cut(s) | 36 |
| BstDEI | CTNAG | 1 cut(s) | 9 |
| BstF5I | GGATG | 1 cut(s) | 193 |
| BstKTI | GATC | 5 cut(s) | 28, 261, 448, 496, 514 |
| BstMAI | GTCTC | 1 cut(s) | 66 |
| BstMBI | GATC | 5 cut(s) | 25, 258, 445, 493, 511 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 272 |
| BstV1I | GCAGC | 1 cut(s) | 385 |
| BtsCI | GGATG | 1 cut(s) | 193 |
| BtsI | GCAGTG | 1 cut(s) | 303 |
| BtsIMutI | CAGTG | 1 cut(s) | 303 |
| CaiI | CAGNNNCTG | 1 cut(s) | 509 |
| CciI | TCATGA | 1 cut(s) | 547 |
| CviAII | CATG | 1 cut(s) | 548 |
| CviJI | RGCY | 7 cut(s) | 68, 86, 127, 199, 304, 509, 521 |
| CviKI_1 | RGCY | 7 cut(s) | 68, 86, 127, 199, 304, 509, 521 |
| DdeI | CTNAG | 1 cut(s) | 9 |
| DpnI | GATC | 5 cut(s) | 27, 260, 447, 495, 513 |
| DpnII | GATC | 5 cut(s) | 25, 258, 445, 493, 511 |
| DraIII | CACNNNGTG | 1 cut(s) | 272 |
| Eam1104I | CTCTTC | 1 cut(s) | 311 |
| EarI | CTCTTC | 1 cut(s) | 311 |
| Eco24I | GRGCYC | 1 cut(s) | 306 |
| Eco88I | CYCGRG | 1 cut(s) | 69 |
| EcoT38I | GRGCYC | 1 cut(s) | 306 |
| FaeI | CATG | 1 cut(s) | 551 |
| FatI | CATG | 1 cut(s) | 547 |
| FbaI | TGATCA | 2 cut(s) | 258, 445 |
| Fnu4HI | GCNGC | 1 cut(s) | 399 |
| FokI | GGATG | 1 cut(s) | 200 |
| FriOI | GRGCYC | 1 cut(s) | 306 |
| Fsp4HI | GCNGC | 1 cut(s) | 399 |
| FspBI | CTAG | 1 cut(s) | 518 |
| GluI | GCNGC | 1 cut(s) | 399 |
| Hin1II | CATG | 1 cut(s) | 551 |
| HindIII | AAGCTT | 1 cut(s) | 84 |
| HinfI | GANTC | 1 cut(s) | 112 |
| HphI | GGTGA | 2 cut(s) | 293, 475 |
| Hpy188I | TCNGA | 3 cut(s) | 48, 105, 430 |
| Hpy188III | TCNNGA | 8 cut(s) | 71, 79, 122, 347, 443, 449, 491, 548 |
| Hpy99I | CGWCG | 3 cut(s) | 486, 489, 492 |
| HpyCH4III | ACNGT | 1 cut(s) | 456 |
| HpyCH4IV | ACGT | 2 cut(s) | 35, 254 |
| HpyCH4V | TGCA | 5 cut(s) | 97, 222, 275, 378, 401 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 272 |
| HpyF3I | CTNAG | 1 cut(s) | 9 |
| HpySE526I | ACGT | 2 cut(s) | 35, 254 |
| Hsp92II | CATG | 1 cut(s) | 551 |
| Ksp22I | TGATCA | 2 cut(s) | 258, 445 |
| Kzo9I | GATC | 5 cut(s) | 25, 258, 445, 493, 511 |
| LguI | GCTCTTC | 1 cut(s) | 311 |
| LpnPI | CCDG | 5 cut(s) | 36, 147, 181, 188, 456 |
| Lsp1109I | GCAGC | 1 cut(s) | 385 |
| LweI | GCATC | 2 cut(s) | 178, 456 |
| MaeI | CTAG | 1 cut(s) | 518 |
| MaeII | ACGT | 2 cut(s) | 35, 254 |
| MaeIII | GTNAC | 1 cut(s) | 136 |
| MalI | GATC | 5 cut(s) | 27, 260, 447, 495, 513 |
| MboI | GATC | 5 cut(s) | 25, 258, 445, 493, 511 |
| MboII | GAAGA | 3 cut(s) | 298, 506, 536 |
| MhlI | GDGCHC | 1 cut(s) | 306 |
| MluCI | AATT | 2 cut(s) | 229, 499 |
| MnlI | CCTC | 1 cut(s) | 454 |
| MseI | TTAA | 4 cut(s) | 156, 366, 498, 553 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 272 |
| NdeII | GATC | 5 cut(s) | 25, 258, 445, 493, 511 |
| NlaIII | CATG | 1 cut(s) | 551 |
| NmeAIII | GCCGAG | 1 cut(s) | 547 |
| PaeR7I | CTCGAG | 1 cut(s) | 69 |
| PagI | TCATGA | 1 cut(s) | 547 |
| PciSI | GCTCTTC | 1 cut(s) | 311 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 487 |
| PfeI | GAWTC | 1 cut(s) | 112 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 316 |
| PkrI | GCNGC | 1 cut(s) | 400 |
| Ppu21I | YACGTR | 1 cut(s) | 36 |
| PshBI | ATTAAT | 2 cut(s) | 156, 366 |
| PstNI | CAGNNNCTG | 1 cut(s) | 509 |
| SapI | GCTCTTC | 1 cut(s) | 311 |
| SaqAI | TTAA | 4 cut(s) | 156, 366, 498, 553 |
| SatI | GCNGC | 1 cut(s) | 399 |
| Sau3AI | GATC | 5 cut(s) | 25, 258, 445, 493, 511 |
| SduI | GDGCHC | 1 cut(s) | 306 |
| SetI | ASST | 8 cut(s) | 38, 70, 88, 183, 257, 386, 465, 511 |
| SfaNI | GCATC | 2 cut(s) | 178, 456 |
| Sfr274I | CTCGAG | 1 cut(s) | 69 |
| SlaI | CTCGAG | 1 cut(s) | 69 |
| SmlI | CTYRAG | 2 cut(s) | 69, 122 |
| SmoI | CTYRAG | 2 cut(s) | 69, 122 |
| Sse9I | AATT | 2 cut(s) | 229, 499 |
| SspI | AATATT | 1 cut(s) | 407 |
| SspMI | CTAG | 1 cut(s) | 518 |
| TaaI | ACNGT | 1 cut(s) | 456 |
| TaiI | ACGT | 2 cut(s) | 38, 257 |
| TaqI | TCGA | 1 cut(s) | 70 |
| TasI | AATT | 2 cut(s) | 229, 499 |
| TfiI | GAWTC | 1 cut(s) | 112 |
| Tru1I | TTAA | 4 cut(s) | 156, 366, 498, 553 |
| Tru9I | TTAA | 4 cut(s) | 156, 366, 498, 553 |
| TscAI | CASTG | 1 cut(s) | 303 |
| TseI | GCWGC | 1 cut(s) | 398 |
| TspDTI | ATGAA | 2 cut(s) | 104, 536 |
| TspRI | CASTG | 1 cut(s) | 303 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 316 |
| VspI | ATTAAT | 2 cut(s) | 156, 366 |
| XhoI | CTCGAG | 1 cut(s) | 69 |
| XspI | CTAG | 1 cut(s) | 518 |